@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2642: (2016-04-05 )
VIRFFKIVTPILLSISLVACSSASGKTEKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVESKKTDVLIISGDLTNNGEKTSHEELAKKLTQVEKNGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIYGDFGYEDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGNPTTEGGLTAGTLDWIKESSALAKKNGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGAMDFSLSGHIHTQNIRSAKSTDGKEITDIVTNALSVFPHKYGNITYSAKNKNFTYQSQKLDMEAWAKAQGSTDENLLNFDQFDYETFYNSGYDKAMMDLMTDESYDKYNQADKEKMADTMGLNNMYFFAGTAPPKSDGMALWDSAPNSFLKDYVLSSSNPPKKSNDYYVSP

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90-...--......100--......-----.----110-.-...----....-.120---------------..-.....130.......140.......150.......160...-....170---...-....180....----.---.-----.190.......200--------------.....----------------------------------..210.......220------.......230.-......240.......250.......260.......270.-.......---280.......--------290.----------------......300....--------------.--------.----------------.-----310.......320.......330.-----......340.......350.......360.......370.......380.......390.......400.....-.-.410.......420.......430.......440.
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) VIRFFKIVTPILLSISLVACSSASGKTEKITAPIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVES--KKT--DVLIISGDL--TNNGEK-----T----S---H-EEL----AKKL-TQVE---------------KN-GTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIY-GDFGYED---AIS-SDEFSLSYLAA----P---S-----SKVWLLMLDTAIYK--------------TNMQQ----------------------------------GNPTTEGGLTAGTLD------WIKESSALAKK-NGAKLIPVLHHNLTDHNDVIQKGYTINYNQQVIDALTE-G-AMDFSLS---GHIHTQNIRS--------AKST----------------DGKEITDIVTNAL--------------S--------V----------------F-----PHKYGNITYSAKNKNFTYQSQKLD-----MEAWAKAQGSTDENLLNFDQFDYETFYNSGYDKAMMDLMTDESYDKYNQADKEKMADTMGLNNMYFFAGTAPPK-S-DGMALWDSAPNSFLKDYVLSSSNPPKKSNDYYVSP
21 HHSearch 96.79100% -58 - C2 -2XMO ? A:[33-443] --------------------------------PIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVES--KKT--DVLIISGDL--TNNGEK-----T----S---H-EEL----AKKL-TQVE---------------KN-GTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIY-SDFGYED---AIS-SDEFSLSYLAA----P---S-----SKVWLLMLDTAIYK--------------TNMQQ----------------------------------GNPTTEGGLTAGTLD------WIKESSALAKK-NGAKLIPVLHHNLTDHNDV--KGYTINYNQQVIDALTE-G-AMDFSLS---GHIHTQNIRS--------AKST----------------DGKEITDIVTNAL--------------S--------V----------------F-----PHKYGNITYSAKNKNFTYQSQKLD-----MEAWAKAQGSTDENLLNFDQFDYETFYNSGYDKAMMDLMTDESYDKYNQADKEKMADTMGLNNMYFFAGTAPPK-S-DGMALWDSAPNSFLKDYVLSSSNPPKKSNDYYVSP
1 PsiBlast_PDB 96.5899% -58 - C2 -2XMO ? A:[33-443] --------------------------------PIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVES--KKT--DVLIISGDL--TNNGEK-----T----S---H-EEL----AKKL-TQVE---------------KN-GTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIY-SDFGYED---AIS-SDEFSLSYLAA----P---S-----SKVWLLMLDTAIYK--------------TNMQQ----------------------------------GNPTTEGGLTAGTLD------WIKESSALAKK-NGAKLIPVLHHNLTDHNDV--KGYTINYNQQVIDALTE-G-AMDFSLS---GHIHTQNIRS--------AKST----------------DGKEITDIVTNAL--------------S--------V----------------F-----PHKYGNITYSAKNKNFTYQSQKLD-----MEAWAKAQGSTDENLLNFDQFDYETFYNSGYDKAMMDLMTDESYDKYNQADKEKMADTMGLNNMYFFAGTAPPK-S-DGMALWDSAPNSFLKDYVLSSSNPPKKSNDYYVSP
41 Fugue 96.5199% -56 - C2 -2XMO ? A:[33-443] --------------------------------PIEKDRNLSMVVTTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVES--KKT--DVLIISGDL--TNNGEK-----T----S---H-EEL----AKKL-TQVE---------------KN-GTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTDFSKIY-SDFGYED---AIS-SDEFSLSYLAA----P---S-----SKVWLLMLDTAIYK--------------TNMQQ----------------------------------GNPTTEGGLTAGTLD------WIKESSALAKK-NGAKLIPVLHHNLTDHND--VKGYTINYNQQVIDALTE-G-AMDFSLS---GHIHTQNIRS--------AKST----------------DGKEITDIVTNAL--------------S--------V----------------F-----PHKYGNITYSAKNKNFTYQSQKLD-----MEAWAKAQGSTDENLLNFDQFDYETFYNSGYDKAMMDLMTDESYDKYNQADKEKMADTMGLNNMYFFAGTAPPK-S-DGMALWDSAPNSFLKDYVLSSSNPPKKSNDYYVSP
24 HHSearch 50.6814% -68 - C2 -3D03 ? A:[1-245] ---------------------------------------MLLAHISDTHFRSRGEKL--------------YGFIDVNAANADVVSQLNALRERP--DAVVVSGDI--VNCGRP-----E----E---Y-QVA----RQIL-GSL-------------------NYPLYLIPGNHDDKALFLEY----------------LQPLC-PQLGS----------DANNMRCAVD----D---------FATRLLFIDSSRAG--------------T------------------------------------------SKGWLTDETIS------WLEAQLFEG---GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVER-FPSLTRIFC---GHNHSLTMTQ--------YR-------------------QALI-STLPGTVHQVPYCHADTDPYYD--------L----------------S-----PASCLMHRQVGE---------------------------------------------------------------------------------------------------------------------------------
23 HHSearch 50.1517% -64 - C2 -3IB7 CPDA_MYCTU A:[21-279] ----------------------------------HPRPDYVLLHISDTHLIGGDRRLYG--------------AVDADDRLGELLEQLNQSGLRP--DAIVFTGDL--ADKGEP-----A----A---Y-RKL----RGLV-EPFAA--------------QL-GAELVWVMGNHDDRAELRK----------------FLLDEA-PS--------------MAPLDRVCM----I---------DGLRIIVLDTSVPG--------------H------------------------------------------HHGEIRASQLG------WLAEELATPA---PDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRG-T-DVRAILA---GHLHYSTNAT--------F---------------------VGIPVSVASAT--------------C--------YTQDLTVAAGGTRGRD-G-----AQGCNLVHVYPD--TVVHSVIPLG---------------------------------------------------------------------------------------------------------------------
25 HHSearch 49.5019% -54 - C2 -1UTE PPA5_PIG A:[3-241] -----------------------------------PTPILRFVAVGDWGGVPNAPFH----------------TAREMANAKAIATTVKT--LGA--DFILSLGDN--FYFTGVH----DAKDKR---FQETF----EDVF-SDPS---------------LR-NVPWHVLAGNHDHLGNVSAQI--------------AYSKIS-KRWNF------------PSPYYRLR----F---KIPRSNVSVAIFMLDTVTLC--------------GNSDDFVSQQ-----------------------------PERPRNLALARTQLA------WIKKQLAAA---KEDYVLVAGHYPVWSIAEHG---PTHCLVKQLLPLLTT-H-KVTAYLC---GHDHNLQYLQ--------DE--------------------NGLGFVLSGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 HHSearch 48.3113% -39 * C2 *2NXF ADPRM_DANRE A:[3-304] ------------------------------------DPVFTFGLIADVQYADIED---GENYLRT----RRRYYRGSADLLRDAVLQWRR--ERV--QCVVQLGDI--IDGHNRRRD--A----S---D-RAL----DTVM-AELD---------------AC-SVDVHHVWGNHEFYNFSRPSLLSS-----------RLNS-A-Q---------GSDLIGDDIYAYEFS----P---A-----PNFRFVLLDAYDLS--------------VIGREEESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQRFVKFNGGFSEQQLQ------WLDAVLTLSDH-KQERVLIFSHLPVHPCAAD--PICLAWNHEAVLSVLRS-HQSVLCFIA---GHDHDGGRCT--------DS--------------------SGAQHITLEGV--------------I--------E----------------TPPH--SHAFATAYLYED---------------------------------------------------------------------------------------------------------------------------------
33 HHSearch 47.5115% -55 - C2 -3AV0 MRE11_METJA A:[18-252] ------------------------------------GSHMMFVHIADNHLGYRQYNL-------------DDREKDIYDSFKLCIKKILE--IKP--DVVLHSGDL--FNDLRP-----PVK--A---L-RIA----MQAF-KKLH---------------EN-NIKVYIVAGNHEMPRRLGEE---------------SPLALL-KDYVK---------ILDG--KDVIN----V---NG----EEIFICGTY-------------------------------------------------------------YHKKSKREEMLD------KLKNFESEAK--NYKKKILMLHQGINPYIPL---------DYE-LEHFDL-P-KFSYYAL---GHIHKRILER--------FN--------------------DG-ILAYSGST--------------E--------IIYRNEYEDYKK-----E-----GKGFYLVDFSGN---------------------------------------------------------------------------------------------------------------------------------
31 HHSearch 46.7813% -55 - C2 -1UF3 ? A:[3-225] ------------------------------------RTVRYILATSNPMGDLE--------------------------ALEKFVKLAPD--TGA--DAIALIGNL--MPKAAK-----S----------RDY----AAFF-RILS---------------EA-HLPTAYVPGPQDAPIW--EYLREA-------AN---VELVH-PEMRN-----------VH-ETFTFW----R---------GPYLVAGVGGEIAD--------------EG-----------------------------------------EPEEHEALRYPAWVAEYRLKALWEL--K-D-YPKIFLFHTMPYHKGL------NEQGSHEVAHLIKT-H-NPLLVLVAGKGQKHE----M--------L---------------------GASWVVVPGDL--------------S-------------------------------EGEYSLLDLRA--RKLETG--------------------------------------------------------------------------------------------------------------------------
37 HHSearch 45.9918% -53 - C2 -3THO RAD50_THEMA B:[1-251] ---------------------------------------MKILHTSDWHLGVTSWTSS----------RPVDRREELKKALDKVVEEAEK--REV--DLILLTGDL--LHSRNN-----P----SVVAL-HDL----LDYL-KRMM---------------R--TAPVVVLPGNQDWKGLKL--FG-------------NFVTSISSDITFV----------MSFEPVDVE----AKR-G-----QKVRILPFPYPDES--------------------------------------------------------KNEGDFRFFLES------RLNKLYEEALK-KEDFAIFMGHFTVEGLAG---------REIIINRALIP-S-VVDYAAL---GHIHSFREIQ--------K--------------------QPLT--IYPGSL--------------I--------RIDFGEEA---------D-----EKGAVFVELKRG---------------------------------------------------------------------------------------------------------------------------------
42 Fugue 45.5417% -43 - C2 -2HY1 CPDA_MYCTU A:[12-267] ----------------------------------------------------------PRPDYVLLHISDT-HLIDADDRLGELLEQLNQ--SGLRPDAIVFTGDL--ADKGEP-----A----A---Y-RKL----RGLV-EPFA---------------AQLGAELVWVMGNHDDRAELRKFLLDEAPSM----APLDRVCMI-DG---------------------------------------LRIIVLDTSV--------------------------------------------------------PGHHHGEIRASQLG------WLAE--ELATP-APDGTILALHHPPIPSVLDMAVTVELRDQAALGRVLRG-T-DVRAILA---GHLHYSTNAT--------FVGI----------------PVSVASATCGCNL--------------V--------H----------------V-----YPDTVVHSVIP----------------------------------------------------------------------------------------------------------------------------------
39 HHSearch 45.4619% -68 - C2 -3CK2 ? A:[4-163] ------------------------------------MAKQTIIVMSDSHGDSL--------------------------IVEEVRDRYV---GKV--DAVFHNGDS--ELRPDS-----P------------------------L-------------------WEGIRVVKGNMDFYAGY--------------------------------------------------------------------------------------------P----------------------------------------------------E------RLVT------E-LGSTKIIQTHGHLFDINF---------NFQKLDYWAQE-E-EAAICLY---GHLHVPSAWL--------E---------------------GKILFLNPGSI--------------S--------QPRGTI-----------R-----ECLYARVEIDDS--YFKVDFLTRD---------------------------------------------------------------------------------------------------------------------
38 HHSearch 45.3414% -85 - C2 -1S3L P936_METJA A:[26-183] ---------------------------------------MKIGIMSDTHDHLP--------------------------NIRKAIEIFND--ENV--ETVIHCGDF--VSLF--------------------V----IKEF-ENL-------------------NANIIATYGNNDGERCKLK----------------EW---L-K-----------------------D----I---------NEENII--------------------------------------------------------------------------DD------FISV------E-IDDLKFFITHGHHQSVL---------------EMAIKS-G-LYDVVIY---GHTHERVFEE--------V---------------------DDVLVINPGEC--------------C--------G----------------YLTG--IPTIGILDTEKK---------------------------------------------------------------------------------------------------------------------------------
30 HHSearch 45.0114% -57 - C2 -2QFP PPAF_PHAVU A:[117-324] ------------------------------------DVPYTFGLIGDLGQSFDSN-----------------------TTLSHY--ELSP--KKG--QTVLFVGDL--SYADRYPNHDNV----R---W-DTW----GRFT-ERSV----------------A-YQPWIWTAGNHEIEFAPEIN--E----------TEPFKPFS-YRYHVPY---EAS-QSTSPFWYSIK----R---------ASAHIIVLSSYSAY------------------------------------------------------------GRGTPQYT------WLKKELRKVKRSETPWLIVLMHSPLYNSYNHHFM-EGEAMRTKFEAWFVK-Y-KVDVVFA---GHVHAYERSE--------R---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44 Fugue 44.8012% -37 - C2 -2DXN ? A:[1-271] ---------------------------------------MLLAHISDTHFRSRGEKLYGFI--------------DVNAANADVVSQLNA--LRERPDAVVVSGDI--VNCGRP-----E----E---Y-QVA----RQIL-GSLN-------------------YPLYLIPGNHDDKALFLEYLQPLCPQLGSDANNMRCAVDD-FAT---------------------------------------RLLFIDSSR--------------------------------------------------------AGTSKGWLTDETIS------WLEA--QLFEG-GDKPATIFMHHPPLPLGNAQMDPIACENGHRLLALVERFP-SLTRIFC---GHNHSLTMTQYRQALISTLPGT----------------VHQVPYCHEDTDP--------------Y--------Y----------------D-----LSPASCLMHRQVGEQWVSYQHSLAHYAGPWLYDENISCPT-----------------------------------------------------------------------------------------------------
46 Fugue 44.5712% -36 - C2 -2NXF ADPRM_DANRE A:[3-322] ------------------------------------DPVFTFGLIADVQYADIEDGENYLRTRRR-------YYRGSADLLRDAVLQWRR--ERV--QCVVQLGDIIDGHNRRR-----D----A---S-DRA----LDTVMAELD---------------AC-SVDVHHVWGNHEFYNFSRPSLLSSRLNSAQGSDLIGDDIYA-YEFSPAPNFRFVL-LDAYDLSVIGR----E---E-----ESEKHTHSWRILTQHNHNLQDLNLPPVSVGLEQ----------------------------------RFVKFNGGFSEQQLQ------WLDAVLTLSDH-KQERVLIFSHLPV--HPCAADPICLAWNHEAVLSVLRSHQ-SVLCFIA---GHDHDGGRCT--------DSS--------------------GAQHITLEGV--------------I--------E----------------T-----PPH---------------------------------------------------------------------------------------SHAFATAYLYEDRMVMKGRGRVEDLTITYS---------------------
35 HHSearch 44.5616% -41 - C2 -3T1I MRE11_HUMAN A:[28-312] ----------------------------------DDENTFKILVATDIHLGFMEKD--------------AVRGNDTFVTLDEILRLAQE--NEV--DFILLGGDL--FHENKP-----SRK--T---L-HTC----LELL-RKYCMGDRPVQFEILSDQLNI-SIPVFSIHGNHDDPTGADA-LC-----ALDILSCAGFVNHF-GRSM------SVE-K-IDISPVLLQ----KG--S-----TKIALYGLGSIPDE--------------R------------------------------------------LYRMFVNKKVT------MLRPKED---E-NSWFNLFVIHQNRSKHGS---T-------NFIPEQFLD-D-FIDLVIW---GHEHECKIAP--------TKN-----------------EQQLFYISQPGSS--------------VVTSLSPGEA----------------V-----KKHVGLLRIKGR---------------------------------------------------------------------------------------------------------------------------------
26 HHSearch 44.3612% -46 - C2 -3TGH ? A:[2-293] -------------------------------------CQLRFASLGDWGKDTKG----------------------QILNAKYFKQFIKN--ERV--TFIVSPGSN--FIDGVK-----GL---N---D-PAWKNLYEDVY-SEEKG--------------DM-YMPFFTVLGTRDWTGNYNAQLLKGQG----------DATNY-PKWIM------------PNYWYHYFTHFTVSHKD-----LAAAFIFIDTWVLS--------------SN----------------------------------------FPYKKIHEKAWN------DLKSQLSVAKK-IADFIIVVGDQPIYSSGYSRG---SSYLAYYLLPLLKD-A-EVDLYIS---GHDNNMEVIE--------D---------------------NDMAHITCGSG--------------S--------MSQGKSGMKNSKSLFFSS-----DIGFCVHELSNN--GIVTKFVSS----------------------------------------------------------------------------------------------------------------------
29 HHSearch 43.7613% -57 - C2 -1XZW PPAF1_IPOBA A:[124-331] ------------------------------------DVPYVFGLIGDIGQTHDSN-----------------------TTLTHYEQN--S--AKG--QAVLFMGDL--SYSNRWPNHDNN----R---W-DTW----GRFS-ERSV----------------A-YQPWIWTAGNHEIDYAPDIG------------EYQPFVPFT-NRYPTPH---EAS-GSGDPLWYAIK----R---------ASAHIIVLSSYSGF------------------------------------------------------------VKYSPQYK------WFTSELEKVNRSETPWLIVLVHAPLYNSYEAHYM-EGEAMRAIFEPYFVY-Y-KVDIVFS---GHVHSYERSE--------R---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36 HHSearch 43.6817% -44 - C2 -3RQZ ? A:[2-228] -------------------------------------NAMRILIISDVHANLV--------------------------ALEAVLSDAG----RV--DDIWSLGDI--VGYGPR-----P----------REC----VELV-RVL--------------------APNISVIGNHDWACIGRLS-------------L--------D--N------------------------------------PVARFA--S-----------------------------------------------------------YWTTMQLQAEHLQ------YLESLPNRMI----DGDWTVVHGSPRHPIWE----Y-IYNARIAALNFPA-F-DTPLCFV---GHTHVPLYIR--------EDEALSNVAPHHPNDGEVLDVSSGRYIINPGAV--------------G--------Q----------------PRDGDPRASYAIFEPDA--QRVTFHRVEYR-----IADTQAQ---------------------------------------------------------------------------------------------------------