@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2678: (2016-04-06 )
MNSKRLVLIVEDEDGISNFISAVLTASDYSVIKAVNGKEALEQTASHSPDVVLLDLGLPDMEGLDVLRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQPSSKESPNDHIIRIQDLYIDDDRRLVKMDDTEIHFTPIEYKILLLLARHAGKVLTHDFIIREIWGPYPSENQALRVNMSNIRRKIEKNPAEPAYILTEVGVGYRMAEE

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70..-......80........90........100.......110.......120.......130.......140.......150.......160.......170.......180......-.-190-.-......200.......210.......220.......230
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MNSKRLVLIVEDEDGISNFISAVLTASDYSVIKAVNGKEALEQTASHSPDVVLLDLGLPDMEGLDVLRDIRVW-SKVPIIVVSARDHEREKVTALDLGADDYITKPFGTSELLARIRTALRHIQPSSKESPNDHIIRIQDLYIDDDRRLVKMDDTEIHFTPIEYKILLLLARHAGKVLTHDFIIREIWG-P-YPS-E-NQALRVNMSNIRRKIEKNPAEPAYILTEVGVGYRMAEE
21 PsiBlast_CBE 92.1043%-130 - C4 -4KNY KDPE_ECOLI B:[6-225] ------VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQW-SAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALR--RHSATTAP-DPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWG-P-NAV-EHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRF---
1 PsiBlast_PDB 91.4743%-129 - C4 -4KNY KDPE_ECOLI A:[6-225] ------VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQW-SAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALR--RH----AP-DPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWG-P-NAV-EHSHYLRIYMGHLRQKLEQDPARPRHFITETGIGYRF---
2 PsiBlast_PDB 90.7943%-127 - C4 -4KFC - KDPE_ECOLI A:[6-225] ------VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQW-SAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALR--RHS---AP-DPLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWG-P-NAV-EHSHYLRIYMGHLRQKLEQDPARPRHFITATGIGYRF---
93 HHSearch 81.7735%-118 - C5 -2GWR MTRA_MYCTU A:[5-227] ---RQRILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRAD-SGVPIVMLTAKTDTVDVVLGLESGADDYIMKPFKPKELVARVRARLRRNDDEPAE-----MLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWG-Y-R--AD-TRLVNVHVQRLRAKVEKDPENPTVVLTVRGVGYKAGP-
94 HHSearch 79.5030%-118 - C5 -1YS7 PRRA_MYCTU A:[7-232] ---SPRVLVVDDDSDVLASLERGLRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLRRRGSTATSS-S-ETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWG-Y-DFA-D-TNVVDVFIGYLRRKLEAG---PRLLHTVRGVGFVLRM-
99 HHSearch 73.9330%-124 - C4 -1KGS ? A:[3-224] ----VRVLVVEDERDLADLITEALKKEMFTVDVCYDGEEGMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGVNTPVLMLTALSDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRRKSESKST-----KLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLVMNKNRVVTKEELQEHLW-------VF-SDVLRSHIKNLRKKVDKGF-KKKIIHTVRGIGYVARD-
3 PsiBlast_PDB 72.5137%-108 - C5 -2OQR REGX3_MYCTU A:[7-228] ------VLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRAR-SSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEM-SDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWG-ADYVG-D-TKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKL---
97 HHSearch 72.3436%-107 - C5 -2OQR REGX3_MYCTU A:[4-229] ---ATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPAALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRAR-SSVPVIMVTARDSEIDKVVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMSD-GVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWG-A-DYVGD-TKTLDVHVKRLRSKIEADPANPVHLVTVRGLGYKLE--
18 PsiBlast_PDB 71.1931%-111 - C5 -1YS7 PRRA_MYCTU A:[27-228] -----------------------LRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLR--RRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYD-FA--D-TNVVDVFIGYLRRKLEAG---PRLLHTVRGVGF-----
17 PsiBlast_PDB 69.9831%-107 - C5 -1YS6 PRRA_MYCTU A:[27-228] -----------------------LRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSAR--VDDRVAGLEAGADDYLVKPFVLAELVARVKALLR--RRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYD-FAA-D-TNVVDVFIGYLRRKLEAG-GGPRLLHTVRGVGF-----
26 PsiBlast_CBE 69.3231% -97 - C5 -1YS7 PRRA_MYCTU B:[27-228] -----------------------LRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLR--RRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYD-FAA-D-TNVVDVFIGYLRRKLEAG-G-PRLLHTVRGVGF-----
16 PsiBlast_PDB 68.2249%-135 - C4 -4L85 KDPE_ECOLI A:[6-120] ------VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILALG-----GIEFIRDLRQW-SAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRR------------------------------------------------------------------------------------------------------------------
27 PsiBlast_CBE 67.6131% -92 - C5 -1YS6 PRRA_MYCTU B:[27-228] -----------------------LRLSGFEVATAVDGAEALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDNDVPVCVLSARSSVDDRVAGLEAGADDYLVKPFVLAELVARVKALLR--RRGSTATSSSETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGYD-FAA-D-TNVVDVFIGYLRRKLEAG-GGPRLLHTVRGVGF-----
5 PsiBlast_PDB 66.5950%-126 - C4 -1NXO - ? A:[4-120] ------ILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLM---IDGLEVAKTIRKT-SSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRSQ----------------------------------------------------------------------------------------------------------------
22 PsiBlast_CBE 66.0150%-117 - C4 -1ZH4 KDPE_ECOLI B:[4-118] ------VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQW-SAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRR------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 65.5550%-120 - C4 -1ZH2 KDPE_ECOLI A:[4-118] ------VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILDLGLPDGDGIEFIRDLRQW-SAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRR------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 65.5550%-124 - C4 -1NXW ? A:[4-119] ------ILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKT-SSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRS-----------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 65.5050%-125 - C4 -1NXS - ? A:[4-120] ------ILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILD--LPEIDGLEVAKTIRKT-SSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRSQ----------------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 65.4649%-121 - C4 -4L85 KDPE_ECOLI C:[6-120] ------VLIVEDEQAIRRFLRTALEGDGMRVFEAETLQRGLLEAATRKPDLIILALGLPDGDGIEFIRDLRQW-SAVPVIVLSARSEESDKIAALDAGADDYLSKPFGIGELQARLRVALRR------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 65.3950%-122 - C4 -1NXV - ? A:[4-119] ------ILIVDDEKPISDIIKFNMTKEGYEVVTAFNGREALEQFEAEQPDIIILDLMLPEIDGLEVAKTIRKT-SSVPILMLSAKDSEFDKVIGLELGADDYVTKPFSNRELQARVKALLRRS-----------------------------------------------------------------------------------------------------------------