@TOME V2.3
(Nov 2016)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2728: (2016-04-06 )
MTKNNISFYVVDASEELTMNIKEASEKSGVSADTIRYYERIGLIPPIHRNENGVRKFGAEDLRWILFTRQMRRAGLSIEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERSNS

Atome Classification :

(20 SA) .........10........---20........30........40...-.....50.........60---........70........80......-.-.90.-.-.....--.100--.......110.......120.......130.......140.......150
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MTKNNISFYVVDASEELTM---NIKEASEKSGVSADTIRYYERIGLI-PPIHRN-ENGVRKFGAED---LRWILFTRQMRRAGLSIEALIDYLAL-F-REGE-H-TLEAR--AELL--KKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERSNS
24 HHSearch 96.9897%-101 - C2 -3GP4 ? A:[2-133] -----------------SL---NIKEASEKSGVSADTIRYYERIGLI-PPIHRN-ESGVRKFGAED---LRWILFTRQMRRAGLSIEALIDYLAL-F-REGE-H-TLEAR--AELL--KKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERS--
1 PsiBlast_PDB 96.9897%-101 - C2 -3GP4 ? A:[2-133] -----------------SL---NIKEASEKSGVSADTIRYYERIGLI-PPIHRN-ESGVRKFGAED---LRWILFTRQMRRAGLSIEALIDYLAL-F-REGE-H-TLEAR--AELL--KKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERS--
21 PsiBlast_CBE 96.2097%-108 - C2 -3GP4 ? B:[2-131] -----------------SL---NIKEASEKSGVSADTIRYYERIGLI-PPIHRN-ESGVRKFGAED---LRWILFTRQMRRAGLSIEALIDYLAL-F-REGE-H-TLEAR--AELL--KKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVE----
4 PsiBlast_PDB 68.5030% -92 - C2 -1Q07 CUER_ECOLI A:[1-110] ------------------M---NISDVAKITGLTSKAIRFYEEKGLV-TPPMRS-ENGYRTYTQQH---LNELTLLRQARQVGFNLEESGELVNL-F-NDPQRH-SADVK--RRTL--EKV-AEIERHIEELQSMRDQL----------------------------
2 PsiBlast_PDB 68.2630% -88 - C2 -1Q05 CUER_ECOLI A:[1-110] ------------------M---NISDVAKITGLTSKAIRFYEEKGLV-TPPMRS-ENGYRTYTQQH---LNELTLLRQARQVGFNLEESGELVNL-F-NDPQRH-SADVK--RRTL--EKV-AEIERHIEELQSMRDQL----------------------------
3 PsiBlast_PDB 67.9030% -91 - C2 -1Q06 CUER_ECOLI A:[1-110] ------------------M---NISDVAKITGLTSKAIRFYEEKGLV-TPPMRS-ENGYRTYTQQH---LNELTLLRQARQVGFNLEESGELVNL-F-NDPQRH-SADVK--RRTL--EKV-AEIERHIEELQSMRDQL----------------------------
10 PsiBlast_PDB 63.1730% -96 - C2 -2ZHG SOXR_ECOLI A:[16-120] -------------------------EVAKRSGVAVSALHFYESKGLI-TSI-RN-SGNQRRYKRDV---LRYVAIIKIAQRIGIPLATIGEAFGV----------TLSAKEWKQLS--SQWREELDRRIHTLVALRDELDGCI------------------------
28 HHSearch 61.0624% -86 - C2 -2ZHG SOXR_ECOLI A:[10-124] ----------------ALL---TPGEVAKRSGVAVSALHFYESKGLI-TS-IRN-SGNQRRYKRDV---LRYVAIIKIAQRIGIPLATIGEAFGV--------TLSAKEW--KQLS--SQWREELDRRIHTLVALRDELDGCIGCGC--------------------
51 Fugue 60.1827% -82 - C2 -4R4E GLNR_BACSU A:[1-83] ----------MSDNIRRSMPLFPIGIVMQLTELSARQIRYYEENGLI-FP-ART-EGNRRLFSFHD---VDKLLEIKHLIEQGVNMAGIKQILAK-A-EAE------------------------------------------------------------------
11 PsiBlast_PDB 59.4430% -87 - C2 -2ZHH SOXR_ECOLI A:[16-120] -------------------------EVAKRSGVAVSALHFYESKGLI-TSI-RN-SGNQRRYKRDV---LRYVAIIKIAQRIGIPLATIGEAFGV----------TLSAKEWKQLS--SQWREELDRRIHTLVALRDELDGCI------------------------
32 HHSearch 59.1226% -86 - C2 -3QAO ? A:[2-109] ----------------NAM---QIKELAELTGVSVRTLHHYDKIGLL-VPQKDD-WNGYRIYSEKD---VDKLQQILFFKELDFPLKKIQQILDD-P-LF--------DK--NVAL--DMQRHLLIEKKQRIETMLATLDLTIKNE---------------------
47 Fugue 58.8722% -72 - C2 -2ZHG SOXR_ECOLI A:[10-135] ----------------ALL---TPGEVAKRSGVAVSALHFYESKGLI-TS-IRN-SGNQRRYKRDV---LRYVAIIKIAQRIGIPLATIGEAFGV------T-L-SAKEW--KQLS--SQWREELDRRIHTLVALRDELDGCIG---CGCLSRSD------CPLRNP
23 PsiBlast_CBE 58.7635%-116 - C2 -4R4E GLNR_BACSU A:[23-78] --------------------------------LSARQIRYYEENGLI-FP-ART-EGNRRLFSFHD---VDKLLEIKHLIEQGVNMAGIKQILA-------------------------------------------------------------------------
49 Fugue 57.4422% -97 - C2 -1JBG - MTA_BACSU A:[2-107] -----------------KY---QVKQVAEISGVSIRTLHHYDNIELLNPSALTD--AGYRLYSDAD---LERLQQILFFKEIGFRLDEIKEMLDHPN-FDRK-A-ALQSQ--KEIL--MKKKQRMDEMIQTIDRTLLS-----------------------------
16 PsiBlast_PDB 57.2533% -70 - C2 -4R24 ? B:[9-77] ------------------M---SIGIVKELTGLSERQIRYYEKRSLL-FP-DRT-NTGIRKYSFSD-------------------VERLMDIADR-I-EEGV-Q-TSEIR--TELA--KK-----------------------------------------------
48 Fugue 57.1521%-100 - C2 -1JBG - MTA_BACSU A:[2-107] -----------------KY---QVKQVAEISGVSIRTLHHYDNIELL-NPSALT-DAGYRLYSDAD---LERLQQILFFKEIGFRLDEIKEMLDH-PNFDRK-A-ALQSQ--KEIL--MKKKQRMDEMIQTIDRTLLS-----------------------------
15 PsiBlast_PDB 56.6633% -60 - C2 -4R22 ? B:[8-76] ------------------M---SIGIVKELTGLSERQIRYYEKRSLL-FP-DRT-NTGIRKYSFSD-------------------VERLMDIADR-I-EEGV-Q-TSEIR--TELA--KK-----------------------------------------------
30 HHSearch 55.6718% -88 * C2 *1R8E BMRR_BACSU A:[3-113] ---------------ESYY---SIGEVSKLANVSIKALRYYDKIDLF-KPAYVDPDTSYRYYTDSQ---LIHLDLIKSLKYIGTPLEEMKKAQDL-E-M--------EEL--FAFY--TEQERQIREKLDFLSALEQTISLVKKRMK--------------------
12 PsiBlast_PDB 55.6436% -80 - C2 -3QAO ? A:[6-96] -----------------------IKELAELTGVSVRTLHHYDKIGLL-VPQKDD-WNGYRIYSEKDVDKLQQILFFKELDFPLKKIQQILDD-PL-F-DKNV---ALDMQ--RHLLIEKKQRIE-------------------------------------------
20 PsiBlast_PDB 55.1535%-108 - C2 -4R4E GLNR_BACSU B:[23-78] --------------------------------LSARQIRYYEENGLI-FP-ART-EGNRRLFSFHD---VDKLLEIKHLIEQGVNMAGIKQILA-------------------------------------------------------------------------