@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2756: (2016-04-07 )
MTKTLVLAEKPSVGKDIGRVLGAKQGKNGYLEGGKYVVTWALGHLVTLADPERYDSKYKNWNMEDLPMLPEKMKLEPIKQTRKQYETVKKLMNRTDITTIVIATDAGREGELVARWIIDYAKIKKPLKRLWISSVTDKAIREGFEHLKPGKAYENLYHSAVARSEADWVVGINATRALTTKYNAQLSCGRVQTPTLAMIQHREEEIRNFKSREYYGITALTEQESFTWNNGQTFDKALAEKLVKSLQGENAVITDVSMKEKKTFSPGLYDLTELQRDANNRYDFSAKETLNIMQTLYERHKVLTYPRTDSRFISTDIVPTLKERLVACGVGENAKAARQISVKPIKANKSFVDNSKVSDHHAIIPTEQPVSLGDLSDKERKIYDLVVKRFLAVLSDPYIYEETSVKAKIGQEEFTLKGKVVKSLGWKSIYGESREPDQLTKMKKGDTIPVKRINLETGKTKPPARFDEATLLSAMENPSKYMETTNKALAKTLGETGGLGTVATRADIIEKLFNSFSLEKQGKDIQITSKGRQLLELVPEDLKSPELTARWEQKLSKIAKGELDYRKFTAEMRDYAKKAVTEIKQNDKKFRHDNITSQKCPDCGKPMLKVKGKRGTMLVCQDRECGHRESVSRTTNARCPNCHKRMEMRGEGDKQIFVCVCGHREKLSAFQQRRDKQKNKNVSKTDVAKFMKKQNKQEDEPFNNPMAEALAKLKLDK

Atome Classification :

(20 SA) ------------.........10........20--...-...-..--------------30.-..-.-----....40.-.......--------50........60----..-.......70........80........90....--....100.......110.......120.----.-..---.---..130.......140.......150.......160.......170.......-----180.---------..---------....190.......200.......210......----.---220..---.----.--.--..-----------230--------....-.....240..-..-...250.......260.......270.......280.......290......-------.-------300-------.......310.......320.......330.-......340------.--......350.......-360.....---..370--.----..-.....380.......390.......400.......410.......420-...--.....430..-----.-...------.440-.......450.......460.......470.......480.......490.......500.......510--.........520........530.......540-....---.....550.......560..-----------.....570.......----------580.......590.......600.......610-.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.....-
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------MTKTLVLAEKPSVGKDIGRVL--GAK-QGK-NG--------------YLE-GG-K-----YVVTWAL-GHLVTLA--------DPERYDSKYKN-----WN-MEDLPMLPEKMKLEPIKQTRKQYETVKKLMNRT--DITTIVIATDAGREGELVARWIIDYAKI----K-KP---L---KRLWISSVTDKAIREGFEHLKPGKAYENLYHSAVARSEADWVVGINATRALT-----TKYN---------AQ---------LSCGRVQTPTLAMIQHREEEIRNFKSREYYGIT----A---LTEQE---S----F--T--WN-----------N----------GQTF-DKALAEKLVK-SL-QGENAVITDVSMKEKKTFSPGLYDLTELQRDANNRYDFSAKETLNIMQTLYE-------R-------HKV-------LTYPRTDSRFISTDIVPTLKERLVACGVGEN-AKAARQISV------K--PIKANKSFVDNSKVSD-HHAIIPTE---QPVS---L----GD-LSDKERKIYDLVVKRFLAVLSDPYIYEETSVKAKIGQEEFTLKGKVV--KSL--GWKSIYGESR-----E-PDQ------LTKM-KKGDTIPVKRINLETGKTKPPARFDEATLLSAMENPSKYMETTNKALAKTLGETGGLGTVATRADIIE----KLFNSFSLEKQ-GKDIQITSKGRQLLELVPE---DLKS---PELTARWEQKLSKIAKGELD-----------YRKFTAEMRDYAKKA----------VTEIKQNDKKFRHDNITSQKCPDCGKPMLKVKG-KRGTMLVCQDRECGHRESVSRTTNARCPNCHKRMEMRGEGDKQIFVCVCGHREKLSAFQQRRDKQKNKNVSKTDVAKFMKKQNKQEDEPFNNPMAEALAKLKLDK-
26 HHSearch 91.9033% -66 - C2 -1I7D TOP3_ECOLI A:[1-620] --------------MRLFIAEKPSLARAIADVL--PKPHRKG-DG--------------FIE-CGNG-----QVVTWCI-GHLLEQA--------QPDAYDSRYAR-----WN-LADLPIVPEKWQLQPRPSVTKQLNVIKRFLH----EASEIVHAGDPDREGQLLVDEVLDYLQLAPEKR-QQ---V---QRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYT-----ILGRNAGYQ----GV---------LSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVK----A---HIVTPADER----FTAI--WQ-----------PSEACEPYQDEEGRLLHRPLAEHVVN-RI-SGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYE-------T-------HKL-------ITFPRSDCRYLPEEHFAGRHAVMNAISV--H-A--PDLLPQ------PVVDPDIRNRCWDDKKVDA-HHAIIPTA---RSSA--------IN-LTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFL--AEA--GWRTLLGSKERDEEND-GTP------LPVV-AKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQD--KDLKKILRATDGLGTEATRAGIIE----LLFKRGFLTKK-GRYIHSTDAGKALFHSLPE---MATR---PDMTAHWESVLTQISEKQCR-----------YQDFMQPLVGTLYQL----------IDQAKRTP----VRQFRGIVAP----------------------------------------------------------------------------------------------------------------------
23 PsiBlast_CBE 89.2533% -68 - C2 -2O59 TOP3_ECOLI B:[3-621] ----------------LFIAEKPSLARAIADVL--PKP-HRKGDG--------------FIECGN-G-----QVVTWCI-GHLLEQA--------QPDAYDSRYAR-----WN-LADLPIVPEKWQLQPRPSVTKQLNVIKRFLH----EASEIVHAGDPDREGQLLVDEVLDYLQLAPEKR-QQ---V---QRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQ---------GV---------LSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVK----AHIVTPADE---R----F--TAIWQPSEACEPYQDEE----------GRLL-HRPLAEHVVN-RI-SGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYE-------T-------HKL-------ITYPRSDCRYLPEEHFAGRHAVMNAISV-HA-PDLLPQPVV------D--PDIRNRCW-DDKKVDA-HHAIIPTA---RSSA---I-----N-LTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFL--AEA--GWRTLLG-SK-----E-RDEENDGTPLPVV-AKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ--DKDLKKILRATDGLGTEATRAGIIE----LLFKRGFLTKK-GRYIHSTDAGKALFHSLPE---MATR---PDMTAHWESVLTQISEKQCR-----------YQDF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 89.2033% -73 - C2 -2O19 TOP3_ECOLI A:[3-619] ----------------LFIAEKPSLARAIADVL--PKP-HRKGDG--------------FIECGN-G-----QVVTWCI-GHLLEQA--------QPDAYDSRYAR-----WN-LADLPIVPEKWQLQPRPSVTKQLNVIKRFLH----EASEIVHAGDPDREGQLLVDEVLDYLQLAPEKR-QQ---V---QRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQ---------GV---------LSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVK----AHIVTPADE---R----F--TAIWQPSEACEPYQDEE----------GRLL-HRPLAEHVVN-RI-SGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYE-------T-------HKL-------ITYPRSDCRYLPEEHFAGRHAVMNAISV-HA-PDLLPQPVV------D--PDIRNRCW-DDKKVDA-HHAIIPTA---RSSA---I-----N-LTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFL--AEA--GWRTLLG-SK-----E-RDEENDGTPLPVV-AKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ--DKDLKKILRATDGLGTEATRAGIIE----LLFKRGFLTKK-GRYIHSTDAGKALFHSLPE---MATR---PDMTAHWESVLTQISEKQCR-----------YQDF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
22 PsiBlast_CBE 88.8533% -69 - C2 -2O5C TOP3_ECOLI B:[3-618] ----------------LFIAEKPSLARAIADVL--PKP-HRKGDG--------------FIECGN-G-----QVVTWCI-GHLLEQA--------QPDAYDSRYAR-----WN-LADLPIVPEKWQLQPRPSVTKQLNVIKRFLH----EASEIVHAGDPDREGQLLVDEVLDYLQLAPEKR-QQ---V---QRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQ---------GV---------LSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVK----AHIVTPADE---R----F--TAIWQPSEACEPYQDEE----------GRLL-HRPLAEHVVN-RI-SGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYE-------T-------HKL-------ITYPRSDCRYLPEEHFAGRHAVMNAISV-HA-PDLLPQPVV------D--PDIRNRCW-DDKKVDA-HHAIIPTA---RSSA---I-----N-LTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFL--AEA--GWRTLLG-SK-----E-RDEENDGTPLPVV-AKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ--DKDLKKILRATDGLGTEATRAGIIE----LLFKRGFLTKK-GRYIHSTDAGKALFHSLPE---MATR---PDMTAHWESVLTQISEKQCR-----------YQDF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 88.8233% -70 - C2 -1I7D TOP3_ECOLI A:[3-591] ----------------LFIAEKPSLARAIADVL--PKP-HRKGDG--------------FIECGN-G-----QVVTWCI-GHLLEQA--------QPDAYDSRYAR-----WN-LADLPIVPEKWQLQPRPSVTKQLNVIKRFLH----EASEIVHAGDPDREGQLLVDEVLDYLQLAPEKR-QQ---V---QRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQ---------GV---------LSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVK----AHIVTPADE---R----F--TAIWQPSEACEPYQDEE----------GRLL-HRPLAEHVVN-RI-SGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYE-------T-------HKL-------ITFPRSDCRYLPEEHFAGRHAVMNAISV-HA-PDLLPQPVV------D--PDIRNRCW-DDKKVDA-HHAIIPTA---RSSA---I-----N-LTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFL--AEA--GWRTLLG-SK-----E-RDEENDGTPLPVV-AKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ--DKDLKKILRATDGLGTEATRAGIIE----LLFKRGFLTKK-GRYIHSTDAGKALFHSLPE---MATR---PDMTAHWESVLTQISEKQCR-----------YQDF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 88.6733% -68 - C2 -2O54 TOP3_ECOLI B:[3-618] ----------------LFIAEKPSLARAIADVL--PKP-HRKGDG--------------FIECGN-G-----QVVTWCI-GHLLEQA--------QPDAYDSRYAR-----WN-LADLPIVPEKWQLQPRPSVTKQLNVIKRFLH----EASEIVHAGDPDREGQLLVDEVLDYLQLAPEKR-QQ---V---QRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQ---------GV---------LSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVK----AHIVTPADE---R----F--TAIWQPSEACEPYQDEE----------GRLL-HRPLAEHVVN-RI-SGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYE-------T-------HKL-------ITYPRSDCRYLPEEHFAGRHAVMNAISV-HA-PDLLPQPVV------D--PDIRNRCW-DDKKVDA-HHAIIPTA---RSSA---I-----N-LTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFL--AEA--GWRTLLG-SK-----E-RDEENDGTPLPVV-AKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ--DKDLKKILRATDGLGTEATRAGIIE----LLFKRGFLTKK-GRYIHSTDAGKALFHSLPE---MATR---PDMTAHWESVLTQISEKQCR-----------YQDF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 88.6633% -74 - C2 -2O54 TOP3_ECOLI A:[3-619] ----------------LFIAEKPSLARAIADVL--PKP-HRKGDG--------------FIECGN-G-----QVVTWCI-GHLLEQA--------QPDAYDSRYAR-----WN-LADLPIVPEKWQLQPRPSVTKQLNVIKRFLH----EASEIVHAGDPDREGQLLVDEVLDYLQLAPEKR-QQ---V---QRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQ---------GV---------LSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVK----AHIVTPADE---R----F--TAIWQPSEACEPYQDEE----------GRLL-HRPLAEHVVN-RI-SGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYE-------T-------HKL-------ITYPRSDCRYLPEEHFAGRHAVMNAISV-HA-PDLLPQPVV------D--PDIRNRCW-DDKKVDA-HHAIIPTA---RSSA---I-----N-LTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFL--AEA--GWRTLLG-SK-----E-RDEENDGTPLPVV-AKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ--DKDLKKILRATDGLGTEATRAGIIE----LLFKRGFLTKK-GRYIHSTDAGKALFHSLPE---MATR---PDMTAHWESVLTQISEKQCR-----------YQDF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 88.6333% -71 - C2 -2O5E TOP3_ECOLI A:[3-616] ----------------LFIAEKPSLARAIADVL--PKP-HRKGDG--------------FIECGN-G-----QVVTWCI-GHLLEQA--------QPDAYDSRYAR-----WN-LADLPIVPEKWQLQPRPSVTKQLNVIKRFLH----EASEIVHAGDPDREGQLLVDEVLDYLQLAPEKR-QQ---V---QRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQ---------GV---------LSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVK----AHIVTPADE---R----F--TAIWQPSEACEPYQDEE----------GRLL-HRPLAEHVVN-RI-SGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYE-------T-------HKL-------ITYPRSDCRYLPEEHFAGRHAVMNAISV-HA-PDLLPQPVV------D--PDIRNRCW-DDKKVDA-HHAIIPTA---RSSA---I-----N-LTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFL--AEA--GWRTLLG-SK-----E-RDEENDGTPLPVV-AKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ--DKDLKKILRATDGLGTEATRAGIIE----LLFKRGFLTKK-GRYIHSTDAGKALFHSLPE---MATR---PDMTAHWESVLTQISEKQCR-----------YQDF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 88.2833% -67 - C2 -2O5E TOP3_ECOLI B:[3-618] ----------------LFIAEKPSLARAIADVL--PKP-HRKGDG--------------FIECGN-G-----QVVTWCI-GHLLEQA--------QPDAYDSRYAR-----WN-LADLPIVPEKWQLQPRPSVTKQLNVIKRFLH----EASEIVHAGDPDREGQLLVDEVLDYLQLAPEKR-QQ---V---QRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQ---------GV---------LSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVK----AHIVTPADE---R----F--TAIWQPSEACEPYQDEE----------GRLL-HRPLAEHVVN-RI-SGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYE-------T-------HKL-------ITYPRSDCRYLPEEHFAGRHAVMNAISV-HA-PDLLPQPVV------D--PDIRNRCW-DDKKVDA-HHAIIPTA---RSSA---I-----N-LTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFL--AEA--GWRTLLG-SK-----E-RDEENDGTPLPVV-AKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ--DKDLKKILRATDGLGTEATRAGIIE----LLFKRGFLTKK-GRYIHSTDAGKALFHSLPE---MATR---PDMTAHWESVLTQISEKQCR-----------YQDF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 88.2533% -68 - C2 -2O5C TOP3_ECOLI A:[3-616] ----------------LFIAEKPSLARAIADVL--PKP-HRKGDG--------------FIECGN-G-----QVVTWCI-GHLLEQA--------QPDAYDSRYAR-----WN-LADLPIVPEKWQLQPRPSVTKQLNVIKRFLH----EASEIVHAGDPDREGQLLVDEVLDYLQLAPEKR-QQ---V---QRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQ---------GV---------LSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVK----AHIVTPADE---R----F--TAIWQPSEACEPYQDEE----------GRLL-HRPLAEHVVN-RI-SGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYE-------T-------HKL-------ITYPRSDCRYLPEEHFAGRHAVMNAISV-HA-PDLLPQPVV------D--PDIRNRCW-DDKKVDA-HHAIIPTA---RSSA---I-----N-LTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFL--AEA--GWRTLLG-SK-----E-RDEENDGTPLPVV-AKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ--DKDLKKILRATDGLGTEATRAGIIE----LLFKRGFLTKK-GRYIHSTDAGKALFHSLPE---MATR---PDMTAHWESVLTQISEKQCR-----------YQDF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
25 PsiBlast_CBE 87.8033% -69 - C2 -2O19 TOP3_ECOLI B:[3-618] ----------------LFIAEKPSLARAIADVL--PKP-HRKGDG--------------FIECGN-G-----QVVTWCI-GHLLEQA--------QPDAYDSRYAR-----WN-LADLPIVPEKWQLQPRPSVTKQLNVIKRFLH----EASEIVHAGDPDREGQLLVDEVLDYLQLAPEKR-QQ---V---QRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQ---------GV---------LSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVK----AHIVTPADE---R----F--TAIWQPSEACEPYQDEE----------GRLL-HRPLAEHVVN-RI-SGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYE-------T-------HKL-------ITYPRSDCRYLPEEHFAGRHAVMNAISV-HA-PDLLPQPVV------D--PDIRNRCW-DDKKVDA-HHAIIPTA---RSSA---I-----N-LTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFL--AEA--GWRTLLG-SK-----E-RDEENDGTPLPVV-AKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ--DKDLKKILRATDGLGTEATRAGIIE----LLFKRGFLTKK-GRYIHSTDAGKALFHSLPE---MATR---PDMTAHWESVLTQISEKQCR-----------YQDF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 87.4133% -68 - C2 -1D6M - TOP3_ECOLI A:[3-591] ----------------LFIAEKPSLARAIADVL--PKP-HRKGDG--------------FIECGN-G-----QVVTWCI-GHLLEQA--------QPDAYDSRYAR-----WN-LADLPIVPEKWQLQPRPSVTKQLNVIKRFLH----EASEIVHAGDPDREGQLLVDEVLDYLQLAPEKR-QQ---V---QRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILG---------------GV---------LSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVK----AHIVTPADE---R----F--TAIWQPSEACEPYQDEE----------GRLL-HRPLAEHVVN-RI-SGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYE-------T-------HKL-------ITYPRSDCRYLPEEHFAGRHAVMNAISV-HA-PDLLPQPVV------D--PDIRNRCW-DDKKVDA-HHAIIPTA---RSSA---I-----N-LTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFL--AEA--GWRTLLG-SK-----E-RDEENDGTPLPVV-AKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ--DKDLKKILRATDGLGTEATRAGIIE----LLFKRGFLTKK-GRYIHSTDAGKALFHSLPE---MATR---PDMTAHWESVLTQISEKQCR-----------YQDF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 87.4033% -74 - C2 -2O59 TOP3_ECOLI A:[3-623] ----------------LFIAEKPSLARAIADVL--PKP-HRKGDG--------------FIECGN-G-----QVVTWCI-GHLLEQA--------QPDAYDSRYAR-----WN-LADLPIVPEKWQLQPRPSVTKQLNVIKRFLH----EASEIVHAGDPDREGQLLVDEVLDYLQLAPEKR-QQ---V---QRCLINDLNPQAVERAIDRLRSNSEFVPLCVSALARARADWLYGINMTRAYTILGRNAGYQ---------GV---------LSVGRVQTPVLGLVVRRDEEIENFVAKDFFEVK----AHIVTPADE---R----F--TAIWQPSCEPYQDE--E----------GRLL-HRPLAEHVVN-RI-SGQPAIVTSYNDKRESESAPLPFSLSALQIEAAKRFGLSAQNVLDICQKLYE-------T-------HKL-------ITYPRSDCRYLPEEHFAGRHAVMNAISV-HA-PDLLPQPVV------D--PDIRNRCW-DDKKVDA-HHAIIPTA---RSSA---I-----N-LTENEAKVYNLIARQYLMQFCPDAVFRKCVIELDIAKGKFVAKARFL--AEA--GWRTLLG-SK----------NDGTP-LPVV-AKGDELLCEKGEVVERQTQPPRHFTDATLLSAMTGIARFVQ--DKDLKKILRATDGLGTEATRAGIIE----LLFKRGFLTKK-GRYIHSTDAGKALFHSLPE---MATR---PDMTAHWESVLTQISEKQCR-----------YQDF-----------------------------------------------------------------------------------------------------------------------------------------------------------------
54 Fugue 78.8226% -47 - C2 -4CGY TOP3A_HUMAN A:[22-640] FSRAAMEMALRGVRKVLCVAEKNDAAKGIADLL--S---NGR-MR--------------RRE-GL-SKFNKIYEFDYHLYGQNVTMVMTSVSGHLLAHDFQMQFRK-----WQ-SCNPLVLFE---AEIEKYCPENFVDIKKTLERETRQCQALVIWTDCDREGENIGFEIIHVCKA----V-KPNLQV---LRARFSEITPHAVRTACENLTEPD--QRVSDAVDVRQELDLRIGAAFTRFQT-----LRLQ---------RIFPEVLAEQLISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIK----V---THDHK---DGIVEF--N--WK-----------R----------HRLF-NHTACLVLYQ-LCVEDPMATVVEVRSKPKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYT-------Q-------GYI--------SYPRTETNIFPRDL--NLTVLVEQQTPDPRWGAFAQSILE------RGGPTPRNGNKSDQA-----HPPIHPTK---YT----------NN-LQGDEQRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLMI--LAR--NYLDVYPYDH-----W-SDKI-----LPVY-EQGSHFQPSTVEMVDGETSPPKLLTEADLIALMEKH-------------------GIGTDATHAEHIE----TIKARMYVGLTPDKRFLPGHLGMGLVEGYDSMGYEMSK---PDLRAELEADLKLICDGKKD-----------KFVVLRQQVQKYKQV----------FIEAVAK---------------------------------------------------------------------------------------------------------------------AKKLDEALAQYFGNGT
20 PsiBlast_PDB 76.0723% -45 - C2 -4CGY TOP3A_HUMAN A:[36-640] --------------KVLCVAEKNDAAKGIADLLSNGRM-RRR-EGLSKFNKIYEFDYHLYGQ-NV-T-----MVMTSVS-GHLLA------------HDFQMQFRK-----WQ-SCN-PLVLFEAEIE--KYCPENFVDIKKTLERETRQCQALVIWTDCDREGENIGFEIIHVCKA----V-KPNLQV---LRARFSEITPHAVRTACENLT--EPDQRVSDAVDVRQELDLRIGAAFTRFQT-----LRLQRIFPEVLAEQL---------ISYGSCQFPTLGFVVERFKAIQAFVPEIFHRIK----V---THDHK---DGIVEF--N--WK-----------R----------HRLF-NHTACLVLYQLCV-EDPMATVVEVRSKPKSKWRPQALDTVELEKLASRKLRINAKETMRIAEKLYT-------Q--------GY-------ISYPRTETNIFPRDLNLTV---LVEQQTPDP-RWGAFAQSILERGGPT--PRNGNKS--DQA-----HPPIHPTK------Y---T----NN-LQGDEQRLYEFIVRHFLACCSQDAQGQETTVEIDIAQERFVAHGLMI--LAR--NYLDVYPYDH-----W-SDK------ILPVYEQGSHFQPSTVEMVDGETSPPKLLTEADLIALMEK-------------------HGIGTDATHAEHIETIKARMYVGLTPDKR-FLPGHLGMGLVEGYDSMGY---EMSK---PDLRAELEADLKLICDGKKDKFVVLRQQVQKYKQVFIEAVAKAKKLDEALAQYFGNGT------------------------------------------------------------------------------------------------------------------------------------------
28 HHSearch 76.0125% -62 * C2 *1MW9 TOP1_ECOLI X:[2-581] -------------GKALVIVESPAKAKTINKYL--GS-----------------------------D-----YVVKSSV-GHIRDLP--------T----------ERGALVNRMGVDPWHNWEAHYEVLPGKEKVVSELKQLAE----KADHIYLATDLDREGEAIAWHLREVIGG----DDAR---Y---SRVVFNEITKNAIRQAFNKPG--ELNIDRVNAQQARRFMDRVVGYMVSPLLW-----KKIA---------RG---------LSAGRVQSVAVRLVVEREREIKAFVPEEFWEVD----A---STTTPSGEA----L--ALQVTHQ---------NDK--------PFRPVNKEQTQAAVS-LL-EKARYSVLEREDKPTTSKPGAPFITSTLQQAASTRLGFGVKKTMMMAQRLYE-------A--------GY-------ITYMRTDSTNLSQDAVNMVRGYISDN----F-G--KKYLPE-----------SPNQYA---------REAIRPSD---VNVMAESL----KD-MEADAQKLYQLIWRQFVACQMTPAKYDSTTLTVGAGDFRLKARGRIL--RFD--GWTKVMPAL-------EDRI------LPAV-NKGDALTLVELTPAQHFTKPPARFSEASLVKELEK-------------------RGIGRPSTYASIIS----TIQDRGYVRVE-NRRFYAEKMGEIVTDRLEENFRELMN---YDFTAQMENNLDQVANHEAE-----------WKAVLDHFFSDFTQQ----------LDKAEKD-------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 75.5827% -53 - C2 -2GAI - TOP1_THEMA A:[7-586] ---------------KYIVVESPAKAKTIKSIL--G----------------------------N-E-----YEVFASM-GHIIDLP--------K-----SKFGV-----DL-EKDFE--PE---FAVIKGKEKVVEKLKDLAKKG--EL---LIASDMDREGEAIA-WHI--ARV----T-NT---LGRKNRIVFSEITPRVIREAVKN--PREIDMKKVRAQLARRILDRIVGYSLSPVLW-----RNFK---------SN---------LSAGRVQSATLKLVCDREREILRFVPKKYHRITVNFDG---LTAE---------I--D--VK-----------E----------KKFF-D---AETLKE-IQ-SIDELVVEEKKVSVKKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGH-------IAF-------ITYMRTDSTRVS-DYAKEEARNLITEVFGEE-YVG-------------------------------AHEAIRPTNVFMTPEE---A----GKYLNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVL--KKIFDGYEKVWKTER-----N-TGE------FP-F-EEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMERL-------------------GIGRPSTYASTIK----LLLNRGYIKKI-RGYLYPTIVGSVVMDYLEKKYSDVVS---VSFTAEMEKDLDEVEQGK--------------KTDKIVLREFYESF----------SSVFDRND-RIVVDFPTNQKC-SCGKEMRLSFG-KYGFYLKC---ECGKTRSV---------------------------------------------------------------------------------------
9 PsiBlast_PDB 75.4327% -54 - C2 -2GAJ - TOP1_THEMA A:[7-586] ---------------KYIVVESPAKAKTIKSIL--G----------------------------N-E-----YEVFASM-GHIIDLP--------K-----SKFGV-----DL-EKDFE--PE---FAVIKGKEKVVEKLKDLAKKG--EL---LIASDMDREGEAIA-WHI--ARV----T-NT---LGRKNRIVFSEITPRVIREAVKN--PREIDMKKVRAQLARRILDRIVGYSLSPVLW-----RNFK---------SN---------LSAGRVQSATLKLVCDREREILRFVPKKYHRITVNFDG---LTAE---------I--D--VK-----------E----------KKFF-D---AETLKE-IQ-SIDELVVEEKKVSVKKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGH-------IAF-------ITYMRTDSTRVS-DYAKEEARNLITEVFGEE-YVG-------------------------------AHEAIRPTNVFMTPEE---A----GKYLNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVL--KKIFDGYEKVWKTER-----N-TGE------FP-F-EEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMERL-------------------GIGRPSTYASTIK----LLLNRGYIKKI-RGYLYPTIVGSVVMDYLEKKYSDVVS---VSFTAEMEKDLDEVEQGK--------------KTDKIVLREFYESF----------SSVFDRND-RIVVDFPTNQKC-SCGKEMRLSFG-KYGFYLKC---ECGKTRSV---------------------------------------------------------------------------------------
27 HHSearch 74.2826% -47 - C2 -2GAI - TOP1_THEMA A:[7-601] ---------------KYIVVESPAKAKTIKSIL--GN-----------------------------E-----YEVFASM-GHIIDLP--------KSK-F-----G-----VD-L--EKDFE--PEFAVIKGKEKVVEKLKDLAK----K-GELLIASDMDREGEAIAWHIARVTNT----L-GR---K---NRIVFSEITPRVIREAVKNPR-EIDM-KKVRAQLARRILDRIVGYSLSPVLW-----RNFK---------SN---------LSAGRVQSATLKLVCDREREILRFVPKKYHRIT----V---NFDGLTA-E----I--D--VK----------------------EKKFFDAETLKEIQS-----IDELVVEEKKVSVKKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYE-------GVETKDGHIAF-------ITYMRTDSTRVSDYAKEEARNLITEV----F-G--EEYVG-------------------------A-HEAIRPTN---VFMT---PEEAGKY-LNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVLKKIFD--GYEKVWKTER-----N--TG------EFPF-EEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMER-------------------LGIGRPSTYASTIK----LLLNRGYIKKI-RGYLYPTIVGSVVMDYLEKKYSDVVS---VSFTAEMEKDLDEVEQGKKT-----------DKIVLREFYESFSSV----------FDRNDRIV----VDFPTNQKCS-CGKEMR-LSFGKYGFYLKC---ECGKTRSVKN---------DEIAVI-DDGKIFL--------------------------------------------------------------
52 Fugue 73.1926% -38 - C2 -2GAI - TOP1_THEMA A:[7-601] ---------------KYIVVESPAKAKTIKSIL--GNE----------------------------------YEVFASM-GHIIDLP--------KSKFGVDLEKD-----F-----------EPEFAVIKGKEKVVEKLKDLAKKG--E---LLIASDMDREGEAIAWHIARVTNT----L-GR---K---NRIVFSEITPRVIREAVKN--PREIDMKKVRAQLARRILDRIVGYSLSPVLW-----RNFK---------SN---------LSAGRVQSATLKLVCDREREILRFVPKKYHRIT----V---NFDGL---T----A--E--ID----------------------VKEK-KFFDAETLKE-IQ-SIDELVVEEKKVSVKKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYE-------G-------VETKDGHIAFITYMRTDSTRVSDYAKEEARNLITEV-FGEE-YVGAHE-AI------R--PTNVFMT----------------------PEE---A----GKYLNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVL--KKIFDGYEKVWKTER-----N-TG-------EFPF-EEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMERL-------------------GIGRPSTYASTIK----LLLNRGYIKKI-RGYLYPTIVGSVVMDYLEK---KYSDVVSVSFTAEMEKDLDEVEQGKKT-----------DKIVLREFYESFSSV----------FDRNDRIVV-----DFPTNQKCSCGKEMRLSFG-KYGFYLKC---ECGKTRSVKNDEIAVID------------DGKIFL------------------------------------------------------------