Atome 2 Filter

@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling

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Values color: [ Good | Correct | Middling | Bad ]

Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2764: (2016-04-07 )
MKIAAFDIGGTALKMGVVLPHGEIILTKSAEISGSDGDQILAEMKVFLAENTDVTGIAVSAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGLPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPGAFRPGKYTLNETTTMLVLRRQYAELTGRPLEEITGEEIFANYDAHDAVSERLITEFYTGICTGLYNLIYLFDPTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQEENRHE

Atome Classification :

	(21 SA)									--------------------------------------------------------------------------.........10........20...---------...-..30....-.-.--.----.----40.----......----.----50...--------...----...60........70........80..-......90....--....100.......110.......120.......130.......140.......150.......160------------..----...------------..170....-----...-180.......190---------.--------------.--------.......200.......210.....--..220.......230.......240....-.--..250........260------.------...----...270.......280.......290..-------
		(Atome)	(Ident)	(Tito)	(Num)		(Ligand)	(Uniprot)		--------------------------------------------------------------------------MKIAAFDIGGTALKMGVVLPHGEI---------ILT-KSAEISGS-D-G--D----Q----ILA----EMKVFL----A----E-NTD--------VTG----IAVSAPGYVNPKTGLITMGGAIRRFDN-FNLKEWLEAETG--LPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPG------------AF----RPG------------KYTLNETTT-----MLV-LRRQYAELTGR-----------P--------------L--------EEITGEEIFANYDAHDAVSERLITE--FYTGICTGLYNLIYLFDPTHIFIGGGITS-R--PTFI-AELKHHMESFG------L------RDT----IIETATHKNQAGLLGAVYHFLQEENRHE-------
1	PsiBlast_PDB	100.00	97%	-127	- C1 -	4HTL		BGLK_LISMO	A:[5-294]	---------------------------------------------------------------------------KIAAFDIGGTALKMGVVLPHGEI---------ILT-KSAEISGS-D-G--D----Q----ILA----EMKVFL----A----E-NTD--------VTG----IAVSAPGYVNPKTGLITMGGAIRRFDN-FNLKEWLEAETG--LPVAIENDANCALLAEKWLGKGQDLDDFLCLTIGTGIGGGIFSNGELVRGGRFRAGEFGYMFSERPG------------AF----RPG------------KYTLNETTT-----MLV-LRRQYAELTGR-----------P--------------L--------EEITGEEIFANYDAHDAVSERLITE--FYTGICTGLYNLIYLFDPTHIFIGGGITS-R--PTFI-AELKHHMESFG------L------RDT----IIETATHKNQAGLLGAVYHFLQEEN----------
41	HHSearch	76.21	35%	-119	- C1 -	2GUP		?	A:[4-291]	--------------------------------------------------------------------------MTIATIDIGGTGIKFASLTPDGKI---------LDK-TSISTPE--N-L--E----D----LLA----WLDQRL---------S-EQD--------YSG----IAMSVPGAVNQETGVIDGFSAVPYIHG-FSWYEALS-SYQ--LPVHLENDANCVGLSELLAHP--ELENAACVVIGTGIGGAMIINGRLHRGRHGLGGEFGYMTTLAP-------------------AEK------------LNNWSQLAS-----TGN-MVRYVIEKSGH-----------------------------------TDWDGRKIYQEAAAGNILCQEAIER--MNRNLAQGLLNIQYLIDPGVISLGGSISQ-N--PDFI-QGVKKAVEDFV------DAYEEYTVAP----VIQACTYHADANLYGALVNWLQEEKQ---------
2	PsiBlast_PDB	72.97	34%	-106	- C1 -	2GUP		?	A:[6-291]	----------------------------------------------------------------------------IATIDIGGTGIKFASLTPDGKI----------LD-KTSISTPE-N-L--E----D----LLA----WLDQRL----S----E-Q-D--------YSG----IAMSVPGAVNQETGVIDGFSAVPYIHG-FS---WYEALSSYQLPVHLENDANCVGLSE--LLAHPELENAACVVIGTGIGGAMIINGRLHRGRHGLGGEFGYMTTLAPA------------EK----LNN------------WSQLASTGN-----MV----RYVIEKSGH-----------------------------------TDWDGRKIYQEAAAGNILCQEAIER--MNRNLAQGLLNIQYLIDPGVISLGGSISQ-N--PDFI-QGVKKAVEDFVDAYEEYT------VAP----VIQACTYHADANLYGALVNWLQEEKQ---------
45	HHSearch	69.16	23%	-113	- C1 -	2AP1		NAGK_SALTY	A:[25-326]	---------------------------------------------------------------------------MYYGFDIGGTKIALGVFDSTRRL---------QWE-KRVPTPHT-S-Y--S----A----FLD----AVCELVEEADQ----R-FGV--------KGS----VGIGIPGMPETEDGTLYAAN-VPAASG-KPLRADLSARLD--RDVRLDNDANCFALSEAWDDEFTQYPLVMGLILGTGVGGGLVLNGKPITGQSYITGEFGHMRLPVDALTLMGFDFPLRRCG----CGQ------------MGCIENYLS-----GRG-FAWLYQHYYDQ------------------------------------SLQAPEIIALWEQGDEQAHAHVER--YLDLLAVCLGNILTIVDPDLLVIGGGLSN-F--TAIT-TQLAERLPRHL------LPVA---RAP----RIERARHGDAGGMRGAAFLHLT-------------
39	HHSearch	67.62	26%	-104	- C1 -	2QM1		?	A:[6-324]	--------------------------------------------------------------------------KKIIGIDLGGTTIKFAILTTDGVV---------QQK-WSIETNILED-G--KHIVPS----IIE----SIRHRI----DLYNMK-KED--------FVG----IGMGTPGSVDIEKGTVVGAYNLNW-TTVQPVKEQIESALG--IPFALDNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVDPNGFD----------CT----CGK------------RGCLETVSS-----ATG-VVRVARHLSEE-----------FAGDSELKQAIDD--G--------QDVSSKDVFEFAEKGDHFALMVVDR--VCFYLGLATGNLGNTLNPDSVVIGGGVSA-AG-EFLR-SRVEKYFQEFT------FPQVR--NST----KIKLAELGNEAGVIGAASLALQFSK----------
36	HHSearch	67.26	29%	-103	- C1 -	3VGL		?	A:[3-313]	---------------------------------------------------------------------------LTIGVDIGGTKIAAGVVDEEGRI---------LST-FKVATPP--T-A--E----G----IVD----AICAAVAGA-S----E-GHD--------VEA----VGIGAAGYVDDKRATVLFAPNIDW-RH-EPLKDKVEQRVG--LPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDGLL----------CG----CGS------------QGCWEQYAS-----GRA-LVRYAKQRANA-----------TPENAAVLLGLGDGSV--------DGIEGKHISEAARQGDPVAVDSFRE--LARWAGAGLADLASLFDPSAFIVGGGVSD-EG-ELVL-DPIRKSFRRWL------IGGEWR-PHA----QVLAAQLGGKAGLVGAADLARQG------------
43	HHSearch	67.04	26%	-112	- C1 -	1Z05		?	A:[109-416]	---------------------------------------------------------------------------QFLSMRLGRGYLTIALHELGGEV---------LID-TKIDIHEI-D-Q--D----DVLARLLF----EIEEFF----QTYAAQ-LDR--------VTS----IAITLPGLVNSEQGIVLQMPHYN-VKN-LALGPEIYKATG--LPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQGKR----------CH----CGN------------YGCLETVAS-----SQA-IRDQVTARIQA-----------GEPSCLAT-------V--------EEISIEDICAAAADGDPLAVDVIQQ--LGRYLGAAIAIVINLFNPEKILIGGVINQ-AK-SILY-PSIEQCIREQS------LPVYH--QDL----KLVESRFYKQATMPGAALIKQA-------------
38	HHSearch	66.74	28%	-109	- C1 -	3VOV		?	A:[1-299]	--------------------------------------------------------------------------MKVVGLDLGGTKIAAGVFDG-KRL---------LSK-VVVPTPKE-G-G--E----R----VAEALAEAAERAE----RE---A-GVR--------GEA----IGLGTPGPLDFRRGVIR---NIPGVQD-FPIRRILEEATG--RPVFLENDANAAALAEHHLGAAQGEESSLYLTVSTGIGGGVVLGGRVLRGERGQGGELGHLTLLPGGPA----------CG----CGL------------EGCLEALAA-----GRA-LERDATYAFQR------------------------------------PVDTRELFRLFQAGDPKAERLVLQ--AARYVGIGLASLVKAFDPGVVVLGGGVAL-NAPEGYW-EALLEAYRRYL------QGW----EAP----PLRRARLGAEAGLLGAALTAYLEVKD---------
64	Fugue	65.92	24%	-108	- C1 -	1Z05		?	A:[34-429]	DHIKQINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIHETTVQEAISRGRPAVGLQTNNLGWQFLSMRLGRGYLTIALHELGGEV---------LID-TKIDIHEI-D-Q--D----D----VLA----RLLFEI----E----E-FFQTYAAQLDRVTS----IAITLPGLVNSEQGIVLQMPHYN-VKN-LALGPEIYKATG--LPVFVANDTRAWALAEKLFGHSQDVDNSVLISIHHGLGAGIVLDGRVLQGRHGNIGELGHIQIDPQGKR----------CH----CGN------------YGCLETVAS-----SQA-IRDQVTARIQAGEPSCLA----T--------------V--------EEISIEDICAAAADGDPLAVDVIQQ--LGRYLGAAIAIVINLFNPEKILIGGVINQAK--SILY-PSIEQCIREQS------L------PVYHQDLKLVESRFYKQATMPGAALIKQALYDGLLLMKVVEG
25	PsiBlast_CBE	63.91	31%	-110	- C1 -	3VGK		?	D:[7-269]	-------------------------------------------------------------------------------VDIGGTKIAAGVVDEEGRI---------LSTFKVATPPTA-E-GIVD----A----ICA----AV-AGA----S----E-GHD--------VEA----VGIGAAGYVDDKRATVLFAPNI-DWRH-EPLKDKVEQRVG--LPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDG------------LLCGCGSQG------------CWEQYASGR-----ALVRYAKQRANATPENAAVLLGLGDGS--------------V--------DGIEGKHISEAARQGDPVAVDSFRE--LARWAGAGLADLASLFDPSAFIVGGGVSD-E--GELV-------------------------------------------------------------------
37	HHSearch	63.63	21%	-100	* C1 *	2AA4		NANK_ECOLI	A:[1-289]	--------------------------------------------------------------------------MTTLAIDIGGTKLAAALIGADGQI---------RDR-RELPTPASQT-P--E----A----LRD----ALSALV----S----PLQAH--------AQR----VAIASTGIIRDGSLLALNPHNLGGLLH-FPLVKTLEQLTN--LPTIAINDAQAAAWAEFQALD-GDITDMVFITVSTGVGGGVVSGCKLLTGPGGLAGHIGHTLADPHGPV----------CG----CGR------------TGCVEAIAS-----GRG-IAAAAQGELA-------------------------------------GADAKTIFTRAGQGDEQAQQLIHR--SARTLARLIADIKATTDCQCVVVGGSVGL-A--EGYL-ALVETYLAQEP------AA-----FHV----DLLAAHYRHDAGLLGAALLAQGE------------
47	HHSearch	63.43	22%	-115	- C1 -	2HOE		?	A:[87-375]	--------------------------------------------------------------------------AYVLGIEVTRDEIAACLIDASMNI---------LAH-EAHPLPSQ-SDR--E----ETLNVMYR----IIDRAKDMMEK----L-GSK--------LSA----LTVAAPGPIDTERGIIIDPRNFP-LSQ-IPLANLLKEKYG--IEVWVENDADMGAVGEKWYTK--RDDSFAWILTGKGIGAGIIIDGELYRGENGYAGEIGYTRVFNGN--------------------E------------YVFLEDVCN-----ENV-VLKHVLS-----------------------------------------MGFS-LAEARDSGDVRVKEYFDD--IARYFSIGLLNLIHLFGISKIVIGGFFKE-LG-ENFL-KKIKIEVETHL------LYK----HSV----DMSFSKVQEPVIAFGAAVHALENYLE---------
14	PsiBlast_PDB	63.36	24%	-98	- C1 -	4DB3		NAGK_VIBVU	A:[29-322]	-------------------------------------------------------------------------------FDVGGTKIEFGAFNEKLER---------VAT-ERVPTPTD-D-Y--P----L----LLE----TIAGLV----A----K-YDQ--------EFACEGKIGLGLPGMEDADDATV-LTVNVPAAKG-KPLRADLEAKIG--RSVKIENDANCFALSEAWDEELQDAPSVMGLILGTGFGGGLIYEGKVFSGRNNVAGELGHMRLPLDA------------WF----HLGDNAPLLGCGCGKKGCLDSYLS-----GRG-FELLYAHYYG------------------------------------EEKKAIDIIKANAAGDEKAAEHVER--FMELLAICFGNIFTANDPHVVALGGGLSN-F--ELIY-EEMPKRVPKYL------LSVA---KCP----KIIKAKHGDSGGVRGAAF-----------------
40	HHSearch	63.33	18%	-104	- C1 -	1Z6R		MLC_ECOLI	A:[86-396]	---------------------------------------------------------------------------HYLSLRISRGEIFLALRDLSSKL---------VVE-ESQELALK-D-D--LPLLDR----IIS----HIDQFF----IRHQKK-LER--------LTS----IAITLPGIIDTENGIVHRMPFYEDVKE-MPLGEALEQHTG--VPVYIQHDISAWTMAEALFGASRGARDVIQVVIDHNVGAGVITDGHLLHAGSSSLVEIGHTQVDPYGKR----------CY----CGN------------HGCLETIAS-----VDS-ILELAQLRLNQ-----------SMSSMLH--------G--------QPLTVDSLCQAALRGDLLAKDIITG--VGAHVGRILAIMVNLFNPQKILIGSPLSK-AA-DILF-PVISDSIRQQA------LPAYS--QHI----SVESTQFSNQGTMAGAA-LVKDAMYN---------
4	PsiBlast_PDB	62.61	27%	-91	- C1 -	2QM1		?	A:[7-321]	---------------------------------------------------------------------------KIIGIDLGGTTIKFAILTTDGVVQQKWSIETNILE-DGKHIVPS-I-I--E----S----IRH----RIDLYN----M----K-KED--------FVG----IGMGTPGSVDIEKGTVVGAYNLNWTTV-QPVKEQIESALG--IPFALDNDANVAALGERWKGAGENNPDVIFITLGTGVGGGIVAAGKLLHGVAGCAGEVGHVTVD-PN------------GFDC--TCG------------KRGCLETVSSATGVVRV-ARHLSEEFAGD-----------S--------------ELKQAIDDGQDVSSKDVFEFAEKGDHFALMVVDRVCFYLGLATG--NLGNTLNPDSVVIGGGVSA-A--GEFLRSRVEKYFQEFT------FPQVR--NST----KIKLAELGNEAGVIGAASLALQ-------------
26	PsiBlast_CBE	62.46	31%	-109	- C1 -	3VGK		?	C:[7-269]	-------------------------------------------------------------------------------VDIGGTKIAAGVVDEEGRI---------LSTFKVATPPTA-E-GIVD----A----ICA----AV-AGA----S----E-GHD--------VEA----VGIGAAGYVDDKRATVLFAPNI-DWRH-EPLKDKVEQRVG--LPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDG------------LLCGCGSQG------------CWEQYASGR-----ALVRYAKQRANATPENAAVLLGLGDGS--------------V--------DGIEGKHISEAARQGDPVAVDSFRE--LARWAGAGLADLASLFDPSAFIVGGGVSD-E--GELV-------------------------------------------------------------------
23	PsiBlast_CBE	62.28	31%	-109	- C1 -	3VGK		?	F:[7-269]	-------------------------------------------------------------------------------VDIGGTKIAAGVVDEEGRI---------LSTFKVATPPTA-E-GIVD----A----ICA----AV-AGA----S----E-GHD--------VEA----VGIGAAGYVDDKRATVLFAPNI-DWRH-EPLKDKVEQRVG--LPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDG------------LLCGCGSQG------------CWEQYASGR-----ALVRYAKQRANATPENAAVLLGLGDGS--------------V--------DGIEGKHISEAARQGDPVAVDSFRE--LARWAGAGLADLASLFDPSAFIVGGGVSD-E--GELV-------------------------------------------------------------------
21	PsiBlast_CBE	62.16	31%	-106	- C1 -	3VGK		?	H:[7-269]	-------------------------------------------------------------------------------VDIGGTKIAAGVVDEEGRI---------LSTFKVATPPTA-E-GIVD----A----ICA----AV-AGA----S----E-GHD--------VEA----VGIGAAGYVDDKRATVLFAPNI-DWRH-EPLKDKVEQRVG--LPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDG------------LLCGCGSQG------------CWEQYASGR-----ALVRYAKQRANATPENAAVLLGLGDGS--------------V--------DGIEGKHISEAARQGDPVAVDSFRE--LARWAGAGLADLASLFDPSAFIVGGGVSD-E--GELV-------------------------------------------------------------------
11	PsiBlast_PDB	62.03	31%	-108	- C1 -	3VGM		?	A:[7-269]	-------------------------------------------------------------------------------VDIGGTKIAAGVVDEEGRI---------LSTFKVATPPTA-E-GIVD----A----ICA----AV-AGA----S----E-GHD--------VEA----VGIGAAGYVDDKRATVLFAPNI-DWRH-EPLKDKVEQRVG--LPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDG------------LLCGCGSQG------------CWEQYASGR-----ALVRYAKQRANATPENAAVLLGLGDGS--------------V--------DGIEGKHISEAARQGDPVAVDSFRE--LARWAGAGLADLASLFDPSAFIVGGGVSD-E--GELV-------------------------------------------------------------------
9	PsiBlast_PDB	61.96	31%	-107	- C1 -	3VGK		?	A:[7-269]	-------------------------------------------------------------------------------VDIGGTKIAAGVVDEEGRI---------LSTFKVATPPTA-E-GIVD----A----ICA----AV-AGA----S----E-GHD--------VEA----VGIGAAGYVDDKRATVLFAPNI-DWRH-EPLKDKVEQRVG--LPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDG------------LLCGCGSQG------------CWEQYASGR-----ALVRYAKQRANATPENAAVLLGLGDGS--------------V--------DGIEGKHISEAARQGDPVAVDSFRE--LARWAGAGLADLASLFDPSAFIVGGGVSD-E--GELV-------------------------------------------------------------------
10	PsiBlast_PDB	61.32	31%	-101	- C1 -	3VGL		?	A:[7-269]	-------------------------------------------------------------------------------VDIGGTKIAAGVVDEEGRI---------LSTFKVATPPTA-E-GIVD----A----ICA----AV-AGA----S----E-GHD--------VEA----VGIGAAGYVDDKRATVLFAPNI-DWRH-EPLKDKVEQRVG--LPVVVENDANAAAWGEYRFGAGQGHDDVICITLGTGLGGGIIIGNKLRRGRFGVAAEFGHIRVVPDG------------LLCGCGSQG------------CWEQYASGR-----ALVRYAKQRANATPENAAVLLGLGDGS--------------V--------DGIEGKHISEAARQGDPVAVDSFRE--LARWAGAGLADLASLFDPSAFIVGGGVSD-E--GELV-------------------------------------------------------------------