@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : Lmo2802: (2016-04-07 )
MNPEQFQMALAEKGIELSDDQMKQFHDYFEMLVEWNEKMNLTAITDEKEVYLKHFYDSISAAFYVDFTKFDTICDVGAGAGFPSLPIKICFPHLKVSIVDSLKKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCMPLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFSFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPIE

Atome Classification :

(20 SA) -----.........10........20--........-.30........40.--------.......50........60........70........80...-.....90-........100.......110..----.....-120.......130.......140....-------.----.-----------------------------.----150.......160.......170....----------------.----------------------..180----.......190.......200.......210.......220.......230......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----MNPEQFQMALAEKGIELSDD---QMKQFHDY-FEMLVEWNEKMNLT--------AITDEKEVYLKHFYDSISAAFYVDFTKFDTICDVGAGAGFPS-LPIKICF-PHLKVSIVDSLKKRMTFLDALAE----KLGLT-DVHFYHDRAETFGQNKAHREKYDLVTA-------R----A-----------------------------V----ARMSVLSELCMPLVKKGGSFLVMKAAQ----------------A----------------------EQELQ----TAEKAIKLFGGKVEEHFSFSLPVEESERNIYVITKTKETPNKYPRKPGTPNKLPIE
23 HHSearch 97.1670%-108 - C1 -1XDZ - RSMG_BACSU A:[1-238] -----MNIEEFTSGLAEKGISLSPR---QLEQFELY-YDMLVEWNEKINLT--------SITEKKEVYLKHFYDSITAAFYVDFNQVNTICDVGAGAGFPS-LPIKICF-PHLHVTIVDSLNKRITFLEKLSE----ALQLE-NTTFCHDRAETFGQRKDVRESYDIVTA-------R----A-----------------------------V----ARLSVLSELCLPLVKKNGLFVALKAA-----------------A----------------------EEELN----AGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKIKNTPKKYPRKPGTPNKSPIE
1 PsiBlast_PDB 96.8569%-108 - C1 -1XDZ - RSMG_BACSU A:[1-238] -----MNIEEFTSGLAEKGISLSPR---QLEQFELY-YDMLVEWNEKINLT--------SITEKKEVYLKHFYDSITAAFYVDFNQVNTICDVGAGAGFPS-LPIKICF-PHLHVTIVDSLNKRITFLEKLSE----ALQLE-NTTFCHDRAETFGQRKDVRESYDIVTA-------R----A-----------------------------V----ARLSVLSELCLPLVKKNGLFVALKAA-----------------A----------------------EEELN----AGKKAITTLGGELENIHSFKLPIEESDRNIMVIRKIKNTPKKYPRKPGTPNKSPIE
15 PsiBlast_CBE 79.3236% -96 - C1 -3G8B RSMG_THET8 B:[12-248] --------ERGRALLLEGGKALGLDLKPHLEAFSRL-YALLQEASGKVNLT--------ALRGEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPG-LPLKIVR-PELELVLVDATRKKVAFVERAIE----VLGLK-GARALWGRAEVLAREAGHREAYARAVA-------R----A-----------------------------V----APLCVLSELLLPFLEVGGAAVAMKGPR----------------V----------------------EEELA----PLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRPGVPERHPL-
5 PsiBlast_PDB 79.2236% -99 - C1 -3G8B RSMG_THET8 A:[12-248] --------ERGRALLLEGGKALGLDLKPHLEAFSRL-YALLQEASGKVNLT--------ALRGEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPG-LPLKIVR-PELELVLVDATRKKVAFVERAIE----VLGLK-GARALWGRAEVLAREAGHREAYARAVA-------R----A-----------------------------V----APLCVLSELLLPFLEVGGAAVAMKGPR----------------V----------------------EEELA----PLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRPGVPERHPL-
43 Fugue 71.9230%-116 - C1 -1JSX - RSMG_ECOLI A:[1-207] ------MLNKLSLLLKDAGISLTDH---QKNQLIAY-VNMLHKWNE--------------------MLVRHILDSIVVAPYL---QGERFIDVGTGPGLPG-IPLSIVR-PEAHFTLLDSLGKRVRFLRQVQH----ELKLE-NIEPVQSRVEEFPSE----PPFDGVIS-------R----A-----------------------------F----ASLNDMVSWCHHLPGEQGRFYALKGQM----------------P----------------------EDEIA----LLPE-------EYQVESVVKLQVPDGERHLVVIKANKI------------------
6 PsiBlast_PDB 71.7430%-127 - C1 -1JSX - RSMG_ECOLI A:[4-206] ---------KLSLLLKDAGISLTDH---QKNQLIAY-VNMLHKWN--------------------EMLVRHILDSIVVAPYLQGERF---IDVGTGPGLPG-IPLSIVR-PEAHFTLLDSLGKRVRFLRQVQH----ELKLE-NIEPVQSRVEEFPSEPP----FDGVIS-------R----A-----------------------------F----ASLNDMVSWCHHLPGEQGRFYALKGQM----------------P----------------------EDEIA----LLPEEY-----QVESVVKLQVP--DGERHLVVIKANK-------------------
25 HHSearch 70.5531%-125 - C1 -1JSX - RSMG_ECOLI A:[3-206] --------NKLSLLLKDAGISLTDH---QKNQLIAY-VNMLHKWN--------------------EMLVRHILDSIVVAPY--L-QGERFIDVGTGPGLPG-IPLSIVR-PEAHFTLLDSLGKRVRFLRQVQH----ELKLE-NIEPVQSRVEEFP----SEPPFDGVIS-------R----A-----------------------------F----ASLNDMVSWCHHLPGEQGRFYALKGQM----------------P----------------------EDEIA--------LLP-EEYQVESVVKLQVP--DGERHLVVIKANK-------------------
49 Fugue 43.7518% -65 - C1 -1JG1 PIMT_PYRFU A:[14-228] EKELYEKWMRTVEMLKAEGIIRSKE---VERAFLKYPRYLSVEDKY-KKYAHIDEPLPIPA----GQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK---TDVYTIERIPELVEFAKRNLE----RAGVK-NVHVILGDGSKGFPPKA---PYDVIIV-------T----A-----------------------------G----A--PKIPEPLIEQLKIGGKLIIPV-------------------------------------------------------------GSYHL-WQELLEVRKTKDGIKIKNHGGVAFVPLIGEYGWK------
29 HHSearch 42.8518% -82 - C1 -2B3T PRMC_ECOLI A:[109-261] -------------------------------------------------------------------------------------QPCRILDLGTGTGAIA-LALASER-PDCEIIAVDRMPDAVSLAQRNAQ----HLAIK-NIHILQSDWFSAL----AGQQFAMIVS-------N----PPYIDEQDPHLQQGDVRFEPLTALVAADSGM----ADIVHIIEQSRNALVSGGFLLLEHGWQ-----------------------------------------QGE----AVRQAFILAGYHDVETC---------------------------------------
41 HHSearch 42.1318% -82 - C1 -3BUS REBMT_NOCAE A:[61-217] -------------------------------------------------------------------------------------SGDRVLDVGCGIGKPA-VRLATA--RDVRVTGISISRPQVNQANARAT----AAGLANRVTFSYADAMDLPF---EDASFDAVWA-------L----E-----------------------------SLHHMPDRGRALREMARVLRPGGTVAIADFVL----------------LAPVEGAKKEAVDAFRAGGGVLSLGGID----EYESDVRQAELVVTSTVDIS------------------------------------
31 HHSearch 42.0319% -78 * C1 *1XXL YCGJ_BACSU A:[21-175] -------------------------------------------------------------------------------------AEHRVLDIGAGAGHTA-LAFSPYV---QECIGVDATKEMVEVASSFAQ----EKGVE-NVRFQQGTAESLPF---PDDSFDIITC-------R----Y-----------------------------AAHHFSDVRKAVREVARVLKQDGRFLLVDHYA----------------PEDPVLDEFVNHLNRLRDPSHVRESSLS----EWQAMFSANQLAYQDIQKWN------------------------------------
44 Fugue 40.7612% -57 - C1 -3OFK ? A:[3-206] --------DPFTMVSVDNTYQSLER---ELAN----------DDPWRLDDN--------PFERERHTQLLRLSLSSGA--------VSNGLEIGCAAG--A-FTEKLAP-HCKRLTVIDVMPRAIGRACQRTK----RW--S-HISWAATDILQFSTA----ELFDLIVVAEVLYYLE----D-----------------------------M----TQMRTAIDNMVKMLAPGGHLVFGSARD----------------A----------------------TCRRWGHVAGAETVITILTEALTEVERVQCQ-GQSADEDCLLARFRNPE----------------
32 HHSearch 40.6921% -76 - C1 -3MQ2 KAMB_STRSD A:[27-184] -------------------------------------------------------------------------------------YDDVVLDVGTGDGKHP-YKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERLPP---LSGVGELHVL-------MPWGSLLRGV-------------------------L----GSSPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTP----------------------DSADE----WLAPRYAEAGWKLADCRYL-------------------------------------
21 PsiBlast_CBE 40.6436% 6 - C1 -3G89 RSMG_THET8 B:[14-248] --------ERGRALLLEGGKALGLDLKPHLEAFSRL-YALLQEA-------------------EEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPG-LPLKIVR-PELELVLVDATRKKVAFVERAIE----VLGLK-GARALWGRAEVLAREAGHREAYARAVA-------R----A-----------------------------V----APLCVLSELLLPFLEVGGAAVAMKGPR----------------V----------------------EEELA----PLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRPGVPERHPL-
17 PsiBlast_CBE 40.4636% 6 - C1 -3G8A RSMG_THET8 E:[14-248] --------ERGRALLLEGGKALGLDLKPHLEAFSRL-YALLQEA------------------GEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPG-LPLKIVR-PELELVLVDATRKKVAFVERAIE----VLGLK-GARALWGRAEVLAREAGHREAYARAVA-------R----A-----------------------------V----APLCVLSELLLPFLEVGGAAVAMKGPR----------------V----------------------EEELA----PLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRPGVPERHPL-
2 PsiBlast_PDB 40.1736% 6 - C1 -3G88 RSMG_THET8 A:[14-248] --------ERGRALLLEGGKALGLDLKPHLEAFSRL-YALLQEA------------------GEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPG-LPLKIVR-PELELVLVDATRKKVAFVERAIE----VLGLK-GARALWGRAEVLAREAGHREAYARAVA-------R----A-----------------------------V----APLCVLSELLLPFLEVGGAAVAMKGPR----------------V----------------------EEELA----PLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRPGVPERHPL-
16 PsiBlast_CBE 40.0536% 6 - C1 -3G8A RSMG_THET8 F:[14-248] --------ERGRALLLEGGKALGLDLKPHLEAFSRL-YALLQEA------------------GEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPG-LPLKIVR-PELELVLVDATRKKVAFVERAIE----VLGLK-GARALWGRAEVLAREAGHREAYARAVA-------R----A-----------------------------V----APLCVLSELLLPFLEVGGAAVAMKGPR----------------V----------------------EEELA----PLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRPGVPERHPL-
20 PsiBlast_CBE 39.7136% 8 - C1 -3G8A RSMG_THET8 B:[14-248] --------ERGRALLLEGGKALGLDLKPHLEAFSRL-YALLQEA------------------GEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPG-LPLKIVR-PELELVLVDATRKKVAFVERAIE----VLGLK-GARALWGRAEVLAREAGHREAYARAVA-------R----A-----------------------------V----APLCVLSELLLPFLEVGGAAVAMKGPR----------------V----------------------EEELA----PLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRPGVPERHPL-
26 HHSearch 39.4516% -81 - C1 -3DH0 ? A:[37-182] -------------------------------------------------------------------------------------EGMTVLDVGTGAGFYL-PYLSKMVGEKGKVYAIDVQEEMVNYAWEKVN----KLGLK-NVEVLKSEENKIPL---PDNTVDFIFM-------A----F-----------------------------TFHELSEPLKFLEELKRVAKPFAYLAIIDWKK----------------EERDKGPPPEE------------VYSEW----EVGLILEDAGIRVGRVVEVG------------------------------------
3 PsiBlast_PDB 39.3936% 8 - C1 -3G89 RSMG_THET8 A:[14-248] --------ERGRALLLEGGKALGLDLKPHLEAFSRL-YALLQEA------------------GEEEVVVKHFLDSLTLLRLPLWQGPLRVLDLGTGAGFPG-LPLKIVR-PELELVLVDATRKKVAFVERAIE----VLGLK-GARALWGRAEVLAREAGHREAYARAVA-------R----A-----------------------------V----APLCVLSELLLPFLEVGGAAVAMKGPR----------------V----------------------EEELA----PLPPALERLGGRLGEVLALQLPLSGEARHLVVLEKTAPTPPAYPRRPGVPERHPL-