@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0003: (2015-11-27 )
MTLYIIANPHAGNKNASTIVGKIQELYHTEDISVFYTEQKDDEKKQVINILRSFKESDHLMIIGGDGTLSKVMTYLPQHIPCAYYPVGSGNDFARALKIPNLKETLTAIQTERLKEINCFIYDKGLILNSLDLGFAAYVVWKASNSKIKNILNRYRLGKITYIVIAIKSLLHSSKVQVLVEGETGQQIKLNDLYFFALANNTYFGGGITIWPKASALTAELDMVYAKGHTFLKRLSILLSLVFKRHTTSKSIKHQTFKAMTVYFPKNSLIEIDGEIVELDQISLKCQKRYLYM

Atome Classification :

(20 SA) ---------.........10..-......20----.-.......30-.--........40.....---------------.-..50......--..60........70.....-----.---.-----.--------80--..-.......90.---------......-----.----------100-......--------..110......-.120.-----.-.....130........140.......150.....----..160.....--.-.170.....--....180-....--------------------....190...---.---.-..200...----......210.......220.......230.......240..---.....250.......260.-......270....----..-------...-280.......290..-----------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---------MTLYIIANPHAGN-KNASTIVG----K-IQELYHTE--D--ISVFYTEQKDDEKKQ---------------V-INILRSFKES--DHLMIIGGDGTLSKVMTYL-----P---Q-----H--------I---PC-AYYPVGSGND---------FARALK-----I----------P-N-LKETLT--------AIQTERLKEIN-CFIYD-----K-GLILNS-LDLGFAAYVVWKASNSKIKNILNRYRL----GKITYIVIAI--K-SL--LHSSK--VQVLVE--GETG--------------------QQIKLNDLYF---F---A-LAN--NTY----FGGGITIWPKASALTAELDMVYAKGHTFLKRLSILLSLVFK---RHTTSKSIKHQTFKAMTVY-FPKNSLI--EIDG----EI-------VEL-DQISLKCQKRY-LYM-----------------------
38 Fugue 83.4520%-103 - C6 -2BON YEGS_ECOLI A:[30-326] ---------PASLLILNGKSTDNLPLREAIM----L-LRE--EGM--T--IHVRVTWEKGDAARY---------------V-EEARKF--GV--ATVIAGGGDGTINEVSTAL-----I---QCEGDDI--------P---AL-GILPLGTAND---------FATSVG-----I----------PEA-LDKALK--------LAIAGDAIAIDMAQVNK-----Q-TCFINM-ATGGFGTRI----------------AL----GSVSYIIHGL--M-RM--DTLQP--DRCEIR--GE----------------------NFHWQGDALV---I---G-IGN--GRQ----AGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTLK-------SDEDNPNIIEGASSWFDIQ-APHDITF--NLDG----EP-------LSG-QNFHIEILPAA-LRCRLPPDCPLLRST-----------
16 PsiBlast_PDB 82.1422% -92 - C6 -3T5P ? A:[17-281] -------------LIVNPKAGQ-GDLHTNLT----K-IVPPLAAAFPD--LHILHTKEQGDATKY---------------C-QEFA---SKV--DLIIVFGGDGTVFECTNGLA----P---L-----E--------IRP-TL-AIIPGGTCND---------FSRTLG-----V----------PQN-IAEAAK--------LITKEHVKPVD-VAKAN-----G-QHFLNF-WGIGLV-----------------KAKL----GKIGYYLSTI--R-TV--KNAETFPVKITYD--G------------------------QVYEDEAVL---V---M-VGN--GEY----LGGIPSFIPNVKCDDGTLDIFVVKS-TGIQAFKDYIGKKLF---EDSNENDIFHVKAKSIHIE-TEEEKEV--DTDG----ES-------SLH-TPCQIELLQGH-FTM-----------------------
20 HHSearch 82.0920%-108 - C6 -2BON YEGS_ECOLI A:[30-314] ---------PASLLILNGKSTD-NLP---LR----E-AIMLLREE--GMTIHVRVTWEKGDAARY---------------V-EEAR--KFGV--ATVIAGGGDGTINEVSTAL-----I---QCEGD-DI-------P---AL-GILPLGTAND---------FATSVG-----I----------P-EALDKALK--------LAIAGDAIAID-MAQVN-----KQTCFINM-ATGGFGTRI----------------AL----GSVSYIIHGL--M-RM--DTLQP--DRCEIR---GEN--------------------FHWQ-GDALV---I---G-IGN--GRQ----AGGGQQLCPNALINDGLLQLRIFTGDEILPA---LVSTLKS----DEDNPNIIEGASSWFDIQ-APHDITF--NLDG----EP-------LSG-QNFHIEILPAA-LRC-----------------------
41 Fugue 80.4017% -96 - C6 -3VZD SPHK1_HUMAN A:[3-361] MGSGVLPRPCRVLVLLNPRGGK-GKALQLFR----SHVQPLLAEA--E--ISFTLMLTERRNHAR---------------E-LVRSEELGRW--DALVVMSGDGLMHEVVNGL-----M---E-----RPDWETAIQK---PL-CSLPAGSGNA---------LAASLN-----HYAGYEQVTNED-L-LTNCTL--------LLCRRLLSPMN-LLSLHTASGLR-LFSVLS-LAWGFIADVDLESEKYRRLG-EMRFTL----GTFLRLA-----A-LR--TYRGR--LAYLPV--GRVGSQGPVDAHLVPLEEPVPSHWTVVPDEDFVL---V---L-ALL--HSH----LGSEMFAAPMGRCAAGVMHLFYVRAGVSRAMLLRLFLAMEKGRHMEYECPYLVYVPVVAFRLEPKDGKGVF--AVDG----EL-------MVS-EAVQGQVHPNY-FWMVSG--------------------
40 Fugue 80.3822% -79 - C6 -3S40 - ? A:[3-300] -----KTKFEKVLLIVNPKAGQ-GDLHTNLT----K-IVPPLAAAFPD--LHILHTKEQGDATKY---------------C-QEFASKV-----DLIIVFGGDGTVFECTNGLAPL--E---I-----R--------P---TL-AIIPGGTCND---------FSRTLG-----V----------PQN-IAEAAK--------LITKEHVKPVD-VAKAN-----G-QHFLNF-WGIGKIGYYL-----------------------------------ST--IETFP--VKITYD--G-------------------------QVYEDEAV---L---VMVGN--GEY----LGGIPSFIPNVKCDDGTLDIFVVKSTG-IQAFKDYIGKKLF---EDSNENDIFHVKAKSIHIE-TEEEKEV--DTDS----SL-------HTP-CQIELLQGHFTMIYNPAVV-------------------
39 Fugue 79.9819%-109 - C6 -2JGR YEGS_ECOLI A:[4-299] --------FPASLLILNGKSTD-NLPLREAIM---L-LR---EEGM-T--IHVRVTWEKGDAARY---------------V-EEARK--FGV--ATVIAGGGDGTINEVSTALIQCEGD---D-----I--------P---AL-GILPLGTAND---------FATSVG-----I----------PEA-LDKALK--------LAIAGDAIAIDMAQVNK-----Q--TCFINMATGGFGTIH------------------------------GLM-RMDT--LQPDR--CEIRGE--NFHW--------------------Q----GDALV---I---G-IGN--GRQ----AGGGQQLCPNALINDGLLQLRIFTG----------------------DNPNIIEGASSWFDIQ-APHDITF--NLDG----EP-------LSG-QNFHIEILPAA-LRCRLPPDCPLLR-------------
17 PsiBlast_PDB 79.6722% -92 - C6 -4WRR ? A:[11-275] -------------LIVNPKAGQ-GDLHTNLT----K-IVPPLAAAFPD--LHILHTKEQGDATKY---------------C-QEFA---SKV--DLIIVFGGDGTVFECTNGLA----P---L-----E--------IRP-TL-AIIPGGTCND---------FSRTLG-----V----------PQN-IAEAAK--------LITKEHVKPVD-VAKAN-----G-QHFLNF-WGIGLV---------SNNIDAEEKAKL----GKIGYYLSTI--R-TV--KNAETFPVKITYD--G------------------------QVYEDEAVL---V---M-VGN--GEY----LGGIPSFIPNVKCDDGTLDIFVVKS-TGIQAFKDYIGKKLF---EDS--NDIFHVKAKSIHIE-TEEEKEV--DTDG----ES-------SLH-TPCQIELLQGH-FTM-----------------------
19 HHSearch 77.6619%-100 - C6 -2QV7 DAGK_STAAR A:[25-313] ---------KRARIIYNPTSGK-EQFKRELP----D-ALIKLEKA--GYETSAYATEKIGDATLE---------------A-ERAM--HENY--DVLIAAGGDGTLNEVVNGI-----AEKPN-----R--------P---KL-GVIPMGTVND---------FGRALH-----I----------P-NDIMGALD--------VIIEGHSTKVD-IGKMN-----N-RYFINL-AAGGQLTQ-----------------------GPFAYYIKGF--E-ML--PQMKA--VDLRIE---YDG--------------------NVFQ-GEALL---F---F-LGL--TNS----MAGFEKLVPDAKLDDGYFTLIIVEKSNLAELGHIMTLASRG---EHTKHPKVIYEKAKAINIS-SFTDLQL--NVDG----EY-------GGK-LPANFLNLERH-IDV-----------------------
18 HHSearch 77.5521% -72 - C6 -3S40 - ? A:[7-293] ---------EKVLLIVNPKAGQ-GDLHTNLT----K-IVPPLAAA--FPDLHILHTKEQGDATKY---------------C-QEF---ASKV--DLIIVFGGDGTVFECTNGL-----APLEI-----R--------P---TL-AIIPGGTCND---------FSRTLG-----V----------P-QNIAEAAK--------LITKEHVKPVD-VAKAN-----G-QHFLNF-WGIG----------------------------KIGYYLSTI-----------ET--FPVKIT---YDG--------------------QVYE-DEAVL---V---M-VGN--GEY----LGGIPSFIPNVKCDDGTLDIFVVKSTGIQAFKDYIGKKLFE---DS-NENDIFHVKAKSIHIE-TEEEKEV--DTD------S-------SLH-TPCQIELLQGH-FTM-----------------------
4 PsiBlast_PDB 66.3423% -66 - C6 -2JGR YEGS_ECOLI A:[65-290] ----------------------------------------------------------------------------------------------------GGDGTINEVSTAL-----I---QCEGD-D--------I---PALGILPLGTAND---------FATSVG-----I----------P-EALDKALKLAIAGDAIAIDMAQVNKQT-CFI-------------NM-ATGGFGT------------------------------IHGLMRM-DT--LQPDR--CEIRGE--NFHW--------------------Q----GDALV---I---G-IGN--GRQ----AGGGQQLCPNALINDGLLQLRIFTG----------------------DNPNIIEGASSWFDIQ-APHDITF--NLDG----EPLSGQNFHIEI-LPAALRCRLPP-DCP-----------------------
3 PsiBlast_PDB 66.1723% -82 - C6 -2BON YEGS_ECOLI A:[90-315] ----------------------------------------------------------------------------------------------------GGDGTINEVSTAL-----I---QCEGD-D--------I---PALGILPLGTAND---------FATSVG-----I----------P-EALDKALKLAIAGDAIAIDMAQVNKQT-CFI-------------NM-ATGGFGTRI----------------AL----GSVSYIIHGL--M-RMDTLQPDR--CEIRGE--NFHW--------------------Q----GDALV---I---G-IGN--GRQ----AGGGQQLCPNALINDGLLQLRIFTGDEILPALVSTL----K---SDEDNPNIIEGASSWFDIQ-APHDITF--NLDG----EPLSGQNFHIEI-LPAALRCRLPP-DCP-----------------------
2 PsiBlast_PDB 65.4224% -95 - C6 -2QV7 DAGK_STAAR A:[57-295] -----------------------------------------------E--TSAYATEKIGD---A---------------T-LEAERAMHENY-DVLIAAGGDGTLNEVVNGIAEK--P---N-----R--------P---KL-GVIPMGTVND---------FGRALH-----I----------P-NDIMGALD--------VIIEGHSTKVD-IGKMN-----N-RYFINL-AAGGQLTQ-----------------------GPFAYYIKGF--E-ML--PQMKA--VDLRIEYDGNVF--------------------QGEAL--LFF---L---G-LTN--SM------AGFEKLVPDAKLDDGYFTLIIVE-KSNLAELGHIMTLASRG--EHTKHPKVIYEKAKAINIS-SFTDLQL--NVDG----EY-------GGK-LPANFLNLERH-IDV-----------------------
1 PsiBlast_PDB 63.0723% -22 - C6 -4WER ? A:[9-293] -------------LIVNPSSGG-EKAKEFETLAEEK-LKQLF--D--E--VVVKQTEKGGDAEQ--------------------FAREAAESHFDSVFVMGGDGTVNEGISGL-----A---E-----Q--------AYRPKF-GFFPLGTVND---------LARALN-----L----------P-M-DPE--E--------AIQQLDLEKTS-AL--D-----V-GKINDD-YFMNVVAIGTI--------------KL----GKLAYFISGA--K-HL--ANAQT--YPFHLS--LDQK--------------------EQTIESSTVL---V---G-LTN--S------IGGFETLLPEAQVDDGKLHLVYLKDQSLWDAVKAVPDLLKG---VDQSTDNLVYLTFKEGTIS-LENQEELTTNVDG----DE-------GAA-LPITLKILPKH-LTV-----------------------
42 Fugue 63.0315%-103 - C6 -1SUW NADK_ARCFU A:[1-249] ---------MRAAVVYKT--------DGHVK----R-IEEALKRL--E--VEVELFNQPSEELEN---------------F-------------DFIVSVGGDGTILRILQKL-----K---R-----C--------P---PI-FGINTGR-VG---------LLTHAS-----P----------E-N-FEVELK--------KAVEKFEVERF----------------------------PRVSCSAMPDVLALN------------EIAVLS--R-KP--AKMID--VALRVD--GVEV--------------------DRIRCDGFIV---ATQIG-STG--YAF----SAGGPVVEPYLEC--------------------FILIPIAP---FRFGWKPYVVSMERKIEVI-AE-KAIV--VADGQK--SV-------DFD-GEITIEKSEFP-AVFFKNEKRFRNLFGKVRSIG-----
47 Fugue 62.2812%-106 - C6 -2AN1 - NADK_SALTY A:[4-292] -------HFKCIGIV-----GH-TTHEMLYR----W-LCDQGYEV--I--VEQQIAHELQLKNVP---------------T-GTLAEIGQQA--DLAVVVGGDGNMLGAARTLA----R---Y-----D--------I---NV-IGINRGNLGF---------LTD-LD-----P----------D-N-ALQQLS--------DVLEGRYISEK-RFLLE-----A-QVCQQR-ISTAINEVVLHPGKVAHM----------------------------------IE--FEVYID--ETFA--------------------FSQRSDGLIISTPT---G-STA--YSL----SAGGPILTPSLD--------------------AITLVPMFP---HTLSARPLVINSSSTIRLR-FSHDLEI--SCDSQIALPI-------QEG-EDVLIRRCDYH-LNLIHPKDYSYFNTLSTKLGWSKKLF
21 HHSearch 58.9914% -79 - C6 -1YT5 NADK_THEMA A:[1-235] ---------MKIAILYREEREK------EGE----F-LKEKISK---E--HEVIEFG---E---A---------------N-APG---RVTA--DLIVVVGGDGTVLKAAKKA-----A---D-----G--------T---PM-VGFKAGRLGF---------LTS-YT-----L----------D-E-IDRFLE--------DLRNWNFREE------------T-RWFIQI-ESELGNHLALNDVTL-E---------R----DL-----------------SGKM--VEIEVE---VEH--------------------HSSMWFFADG---V---V-ISTPTGSTAYSLSIGG----PIIFPECEVLEISPIAPQFFL-----------T--------RSVVIPSNFKVVVE-SQRDINM--LVDG----VL-------TGKTKRIEVKKSRRY-VRI-----------------------
5 PsiBlast_PDB 58.6425% -97 - C6 -2P1R YEGS_SALTY A:[35-214] --------------------------------------------------IHVRVTWEKGDAQRY---------------V-DEARRLGVET----VIAGGGDGTINEVSTAL-----I---QIRDGVA--------P---AL-GLLPLGTAND---------FATSAG-----I----------P-EALDKALK--------LAIAGNAMEIDMAMVND-----K-TCFINM-ATGGFGTRITT---------------L----GGVSYLIHGL--M-RM--DTLTP--DRCEIR--GENF--------------------HW--QGDALV---I---G-IGN--GRQ----AGGGQQLCPTALINDGLLQLRIFTGEELLPALFSTLTQSDD---NPNIIDGASAWFDIHAPHE-ITFNLDG--EPLS----GQ-------EFH-IEVLPGALRCR-LPP-----------------------
14 PsiBlast_PDB 51.1024% -96 - C6 -2PFK - PFKA_ECOLI A:[95-243] ----------------------------------------------------------------------------------------------DALVVIGGDGSYMGAMRLT-----E---M-----G--------F---PC-IGLPGTIDNDIKGTDYTIGFFTALSTVVEAI----------D-R-LRDTSS--------SHQRISVVEVM-GR-YC-----G-DLTLAA-AIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAIT--E-HM--CDVDE--LAHFIE--KETG--------------------RETRATVLGH---I---Q-RGG--SPV----PYDRILASRMGAYAIDLLLAGYGGRCVGIQNEQLVHHDIID---AI--------------------------------------------------------------------------------------
13 PsiBlast_PDB 48.7524% -94 - C6 -1PFK PFKA_ECOLI A:[96-244] ----------------------------------------------------------------------------------------------DALVVIGGDGSYMGAMRLT-----E---M-----G--------F---PC-IGLPGTIDNDIKGTDYTIGFFTALSTVVEAI----------D-R-LRDTSS--------SHQRISVVEVM-GR-YC-----G-DLTLAA-AIAGGCEFVVVPEVEFSREDLVNEIKAGIAKGKKHAIVAIT--E-HM--CDVDE--LAHFIE--KETG--------------------RETRATVLGH---I---Q-RGG--SPV----PYDRILASRMGAYAIDLLLAGYGGRCVGIQNEQLVHHDIID---AIENMKRPFKGDWLDCAKK-LY------------------------------------------------------------------
24 HHSearch 48.4614%-124 - C6 -3PFN NADK_HUMAN A:[39-165] ---------KSVLVIKKMRDAS-L--LQPFK----E-LCTHLMEE--N--MIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQI--DFIICLGGDGTLLYASSLF-----QG--S-----V--------P---PV-MAFHLGSLGF---------LT-PFS-----F----------E-N-FQSQVT--------QVIEGNAAVVL-RSRLK-----V-RVVKQA-MQYQVLNEVVIDRGPSSYLSNVDVYLD----GHLITTVQGD--G-VI--VSTPT--GSTAYA--AAAG--------------------ASMIHPNVPA---I---M-ITP--ICP----HSLSFRPIVVPAGVELKIMLSPEARNTAWVSFDGRKRQEIR---HGDSISITTSCYPLPSICV-RDPVSDW--FESL----AQ-------CLH-H-------------------------------------