Atome 2 Filter

@TOME V2.3
(Nov 2016)

Ref. - - Doc.

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3D Common Core:

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Complexes Modeling

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Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]

Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0030: (2015-11-27 )
MNKWLVKASSLVVLGGMVLSAGSRVLADTYVRPIDNGRITTGFNGYPGHCGVDYAVPTGTIIRAVADGTVKFAGAGANFSWMTDLAGNCVMIQHADGMHSGYAHMSRVVARTGEKVKQGDIIGYVGATGMATGPHLHFEFLPANPNFQNGFHGRINPTSLIANVATFSGKTQASAPSIKPLQSAPVQNQSSKLKVYRVDELQKVNGVWLVKNNTLTPTGFDWNDNGIPASEIDEVDANGNLTADQVLQKGGYFIFNPKTLKTVEKPIQGTAGLTWAKTRFANGSSVWLRVDNSQELLYK

Atome Classification :

	(20 SA)									---------------------------------------------------------------------------------.........10-----.........20.....-------------...30......---..40...---.------------------..------..50..----------......60--....-....70........-80------.........90.--------.....-.-.-100.......110.......120...-....130-........140--.----........150...-......160.......170........180.......190.......----------200.......210.......220.......230.......240....-...250.......260.......270.......280.......290.......
		(Atome)	(Ident)	(Tito)	(Num)		(Ligand)	(Uniprot)		---------------------------------------------------------------------------------MNKWLVKASS------LVVLGGMVLSAGSRVL-------------ADTYVRPIDNG---RITTGFN---G------------------YP------GHCGVD----------YAVPTGTI--IRAV-ADGTVKFAGAGANF-S-------WMTDLAGNCVMI--------QHADG-M-H-SGYAHMSRVVARTGEKVKQGDIIGYV-GATGMA--TGPHLHFEF----L----PANPNFQNG--FHG-RINPTSLIANVATFSGK-TQASAPSIKPLQSAPVQNQSSKLKVYRVD----------ELQKVNGVWLVKNNTLTPTGFDWNDNGIPASEIDEVDANGNLTADQV-LQKGGYFIFNPKTLKTVEKPIQGTAGLTWAKTRFANGSSVWLRVDNSQELLYK
68	Fugue	86.14	28%	-87	- C8 -	1QWY		LYTM_STAA8	A:[20-289]	VSYGTYYTIDSNGDYHHTPDGNWNQAMFDNKEYSYTFVDAQGHTHYFYNCYPKNANANGSGQTYVNPATAGDNNDYTASQSQQHINQYGYQ------SNVGPDASYYSSGHAK-------------DASWLTSRKQL---QPYGQYH---G------------------GG------AHYGVD----------YAMPENSP--VYSL-TDGTVVQAG--------------WSNYGGGNQVTI--------KEANSNN-Y-QWYMHNNRLTVSAGDKVKAGDQIAYS-GSTGNS--TAPHVHFQR----M----S------------------------------------------------------------------------------------------------GGIGNQY-----------------------------------------------------------AVDPTSYLQ-
45	HHSearch	76.32	34%	-102	* C7 *	1QWY		LYTM_STAA8	A:[163-289]	--------------------------------------------------------------------------------------------------------------------------------DASWLTS-R---KQLQPYG---QYHG---------------GG------AHYGVD----------YAMPENSP--VYSL-TDGTVVQAG--------------WSNYGGGNQVTI--------KEANSNN-Y-QWYMHNNRLTVSAGDKVKAGDQIAYS-GSTGNS--TAPHVHFQR----M----------SGGIGNQY-AVDPTSYLQ-----------------------------------------------------------------------------------------------------------------------------------------------------
67	Fugue	75.11	27%	-73	* C8 *	2HSI		?	A:[25-281]	----SFIMRLLNKPVPGGVAVVDLGEEGPPPRAFYQGKPVLVVREEGRRWIAVVGIPLSTKPGPQKLEVRAATGNHEERFSVGSKPEDLKR------IERELAEQTAAYRRFS-------------PGLPSNLMLDK---PVDGPLS---S------------------PF------PHSGLD----------FAVPAGTP--IKAP-AAGKVILIGDYFFN---------------GKTVFV--------DHGQG-F-I-SMFCHLSKIDVKLGQQVPRGGVLGKV-GATGRA--TGPHMHWNV----S----LND----------A-RVDPAIFIGAFQ--------------------------------------------------------------------------------------------------------------------------------------------------
48	HHSearch	75.07	43%	-100	- C7 -	3SLU		?	A:[218-343]	--------------------------------------------------------------------------------------------------------------------------------FNIEPLVYT---RISSPFG---YRMHPILHT----------WR------LHTGID----------YAAPQGTP--VRAS-ADGVITFKG--------------R-KGGYGNAVMI--------RHANG-V-E-TLYAHLSAFSQA-QGNVRGGEVIGFV-GSTGRS--TGPHLHYEA----R----------ING--Q---PVNPVSVALPTPELTQA-DKAAFAAQKQKADALLARLR------------------------------------------------------------------------------------------------------------------------
46	HHSearch	71.58	34%	-93	- C7 -	2GU1		?	A:[201-330]	--------------------------------------------------------------------------------------------------------------------------------FNRYPVDKAYR-QITSGFN---PKRKHPVTGR---------VV------PHNGTD----------FATPIGAP--VYST-GDGKVIVVR--------------K-HPYAGNYLVI--------EHNSV-Y-K-TRYLHLDKILVKKGQLVKRGQKIALA-GATGRL--TGPHLHFEV----L----------VRN--R---PVDAMKADLP----------------------------------------------------------------------------------------------------------------------------------------------------
5	PsiBlast_PDB	69.98	34%	-101	- C7 -	2GU1		?	A:[205-320]	------------------------------------------------------------------------------------------------------------------------------------PVDKAYR-QITSGFNPKRK------------------HPVTGRVVPHNGTD----------FATPIGAP--VYST-GDGKVIVVRKHP---------------YAGNYLVI--------EHNSV-Y-K-TRYLHLDKILVKKGQLVKRGQKIALA-GATGRL--TGPHLHFEV----L----VRNRPVDAM--KAD-LP------------------------------------------------------------------------------------------------------------------------------------------------------------
31	PsiBlast_CBE	69.80	34%	-107	- C7 -	4QP5			B:[12-118]	-------------------------------------------------------------------------------------------------------------------------------------LNNY---KKGYGYG---P------------------YPLGINGGMHYGVD----------FFMNIGTP--VKAI-SSGKIVEAG--------------WSNYGGGNQIGL--------IENDG-V-HRQWYMHLSKYNVKVGDYVKAGQIIGWS-GSTGYS--TAPHLHFQR----M----VNSFSNSTA--QDP-MPFLKS--------------------------------------------------------------------------------------------------------------------------------------------------------
11	PsiBlast_PDB	69.40	34%	-105	- C7 -	4QPB		LSTP_STASI	A:[12-118]	-------------------------------------------------------------------------------------------------------------------------------------LNNY---KKGYGYG---P------------------YPLGINGGMHYGVD----------FFMNIGTP--VKAI-SSGKIVEAG--------------WSNYGGGNQIGL--------IENDG-V-HRQWYMHLSKYNVKVGDYVKAGQIIGWS-GSTGYS--TAPHLHFQR----M----VNSFSNSTA--QDP-MPFLKS--------------------------------------------------------------------------------------------------------------------------------------------------------
6	PsiBlast_PDB	68.76	39%	-100	- C7 -	1QWY		LYTM_STAA8	A:[179-272]	-------------------------------------------------------------------------------------------------------------------------------------------------YH---G------------------GG------AHYGVD----------YAMPENSP--VYSL-TDGTVVQAG--------------WSNYGGGNQVTI--------KEANS-NNY-QWYMHNNRLTVSAGDKVKAGDQIAYS-GSTGNS--TAPHVHFQR----M----SGGIGNQYA--VDP-TSYLQ---------------------------------------------------------------------------------------------------------------------------------------------------------
30	PsiBlast_CBE	68.38	34%	-107	- C7 -	4QPB			B:[12-118]	-------------------------------------------------------------------------------------------------------------------------------------LNNY---KKGYGYG---P------------------YPLGINGGMHYGVD----------FFMNIGTP--VKAI-SSGKIVEAG--------------WSNYGGGNQIGL--------IENDG-V-HRQWYMHLSKYNVKVGDYVKAGQIIGWS-GSTGYS--TAPHLHFQR----M----VNSFSNSTA--QDP-MPFLKS--------------------------------------------------------------------------------------------------------------------------------------------------------
71	Fugue	68.33	20%	-60	- C1 -	4OL8		YG31B_YEAST	A:[24-461]	-------------------------PVWLQQKYREIIRNDLPPPVKHDIEIKPGARLPRLQPYHVTEKNEQEINKIVQKLLDNKFIVPSKSPCSSPVVLVPKTFRLCVDYRTLNKATISDPFPLPRIDNLLSRIGNA---QIFTTLD---L------------------HS------GYHQIPMEPKDRYKTAFVTPSGKY--EYTVMPFGLVNAPSTFARYMADTFRDLRFVNVYLDDILIFSESPEEHWKHLDT-V-L-ERLKNENLIVKKKKCKFEETEFLGYSIGIQKIA--PLQHKCAAIRDFPT----PKTVKQAQR--FLGMINYYRRFIPNCSKIAQPITEKQDKAIDKLKDAPFNNKA----NYRLTTDASKDGIGAVLEEVDN----KNKLVGVVGYFSKSLEYPAGELELLGIIKALHHFRYMLH-GKHFTLRTNHARRVQRWLDDLATYDFTLEY--------------------
9	PsiBlast_PDB	68.06	35%	-98	- C7 -	2B13		LYTM_STAA8	A:[22-131]	-------------------------------------------------------------------------------------------------------------------------------------------------YH---G------------------GG------AHYGVD----------YAMPENSP--VYSL-TDGTVVQAG--------------WSNYGGGNQVTI--------KEANS-NNY-QWYMHNNRLTVSAGDKVKAGDQIAYS-GSTGNS--TAPHVHFQR----M----SGGIGNQYA-------VDPTSYLQS----------------------------------------------------------------------------------------------------------------------------------------------------
7	PsiBlast_PDB	67.71	35%	-102	- C7 -	2B44		LYTM_STAA8	A:[21-130]	-------------------------------------------------------------------------------------------------------------------------------------------------YH---G------------------GG------AHYGVD----------YAMPENSP--VYSL-TDGTVVQAG--------------WSNYGGGNQVTI--------KEANS-NNY-QWYMHNNRLTVSAGDKVKAGDQIAYS-GSTGNS--TAPHVHFQR----M----SGGIGNQYA-------VDPTSYLQ-----------------------------------------------------------------------------------------------------------------------------------------------------
44	HHSearch	67.69	30%	-99	- C7 -	3TUF	-	SP2Q_BACSU	B:[75-223]	----------------------------------------------------------------------------------------------------------------S-------------MENVAMPVVDSENVSVVKKFY---ETDAAKEEKEAALVTYNNTYS------LSKGID----------LAEKDGKDFDVSAS-LSGTVVKAE--------------K-DPVLGYVVEV--------EHADG-L-S-TVYQSLSEVSVEQGDKVKQNQVIGKS-GKNLYSEDSGNHVHFEI----R----------KDG--V---AMNPLNFMDKPVSSIEK-AAT-----------------------------------------------------------------------------------------------------------------------------------------
24	PsiBlast_CBE	67.59	35%	-98	- C7 -	2B44			B:[21-130]	-------------------------------------------------------------------------------------------------------------------------------------------------YH---G------------------GG------AHYGVD----------YAMPENSP--VYSL-TDGTVVQAG--------------WSNYGGGNQVTI--------KEANS-NNY-QWYMHNNRLTVSAGDKVKAGDQIAYS-GSTGNS--TAPHVHFQR----M----SGGIGNQYA-------VDPTSYLQ-----------------------------------------------------------------------------------------------------------------------------------------------------
26	PsiBlast_CBE	67.55	35%	-102	- C7 -	2B0P			B:[22-131]	-------------------------------------------------------------------------------------------------------------------------------------------------YH---G------------------GG------AHYGVD----------YAMPENSP--VYSL-TDGTVVQAG--------------WSNYGGGNQVTI--------KEANS-NNY-QWYMHNNRLTVSAGDKVKAGDQIAYS-GSTGNS--TAPHVHFQR----M----SGGIGNQYA-------VDPTSYLQSR---------------------------------------------------------------------------------------------------------------------------------------------------
25	PsiBlast_CBE	67.54	35%	-102	- C7 -	2B13			B:[22-131]	-------------------------------------------------------------------------------------------------------------------------------------------------YH---G------------------GG------AHYGVD----------YAMPENSP--VYSL-TDGTVVQAG--------------WSNYGGGNQVTI--------KEANS-NNY-QWYMHNNRLTVSAGDKVKAGDQIAYS-GSTGNS--TAPHVHFQR----M----SGGIGNQYA-------VDPTSYLQS----------------------------------------------------------------------------------------------------------------------------------------------------
8	PsiBlast_PDB	66.45	35%	-100	- C7 -	2B0P		LYTM_STAA8	A:[22-131]	-------------------------------------------------------------------------------------------------------------------------------------------------YH---G------------------GG------AHYGVD----------YAMPENSP--VYSL-TDGTVVQAG--------------WSNYGGGNQVTI--------KEANS-NNY-QWYMHNNRLTVSAGDKVKAGDQIAYS-GSTGNS--TAPHVHFQR----M----SGGIGNQYA-------VDPTSYLQSR---------------------------------------------------------------------------------------------------------------------------------------------------
21	PsiBlast_CBE	65.88	45%	-103	- C7 -	3SLU		?	B:[246-338]	----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HTGID----------YAAPQGTP--VRAS-ADGVITFKGRKGGY---------------GNAVMI--------RHANG-V-E-TLYAHLSAFSQAQG-NVRGGEVIGFV-GSTGRS--TGPHLHYEA----RINGQPVNPVSVAL--PTP-ELTQADKAAFAAQKQKA-DALLARLR------------------------------------------------------------------------------------------------------------------------------------
29	PsiBlast_CBE	65.73	33%	-122	- C7 -	4LXC		LSTP_STASI	B:[12-120]	-------------------------------------------------------------------------------------------------------------------------------------LNNY---KKGYGYG---P------------------YPLGINGGMHYGVD----------FFMNIGTP--VKAI-SSGKIVEAG--------------WSNYGGGNQIGL--------IENDG-V-HRQWYMHLSKYNVKVGDYVKAGQIIGWS-GSTGYS--TAPHLHFQR----M----VNSFSNSTA--QDP-MPFLKSAGYGKAGGTVT-PTPNTGWKTNKYGTLYKSESASFTPNTDI----------ITRTTGPFRSMPQSGVLKAGQTIHYDEVMKQDGHVWVGYTGNSGQRI-YLPVRTWNKSTNTLGVLWGTIK-------------------------------