@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : gbs0183: (2015-11-29 )
MELLKTPIFGICFSLILYTIGQHLFKKSKGFFLLQPLFFAMVSGIVILWLMSKGLGTDVKTFYTQAYKPGGDLIFWFLNPATIAFAVPLYKKNDVVKKYWVEILSSLVIGMIVSLMLIVAISKMVGLSQVGIASMLPQAATTAIALPITAAIGGNTAVTAMACILNAVIIYALGKKLVSFFHLNDSKIGAGLGLGTSGHTVGAAFALELGELQGAMAAIAVVVIGLVVDLVIPIFSHLIGLL
Atome Classification :
(16 SA)
-------------------.........10........20........30........40..-------------.---..--------...50-----....--------.....60........70........--80......----------------------.----.90...----..----...100--.........--------------110....---..---.120.---------.....------------.130......--.140....----....150.-----------......160.......----------170.------.......180-.....-..190------..-----......----------200.......210.----......---220--....-------...------------------.230----------------------......-...240-----------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-------------------MELLKT
P
I
F
G
I
C
F
S
L
I
L
Y
T
I
G
Q
H
L
F
K
KSKG
F
F
L
L
Q
P
L
F
F
A
M
V
S
-------------
G
---
I
V
--------
I
L
W
L
------
M
SKG--------LGT
D
V
K
T
F
Y
T
Q
AYKPGG
D
L
I
F
W
F
LN--P
A
T
I
A
F
A
V
----------------------P----LYKKN
D
----
V
V
----
K
K
Y
W
----
V
E
I
L
S
S
L
V
I
--------------
G
M
I
V
S
L
M
---
L
I
---
V
A
I
S
K
---------
M
VG
L
S
------------QV
G
I
A
S
M
L
P
Q
--AAT-
T
A
I
A
----
L
P
I
T
A
AIG-----------G
N
T
A
V
T
A
M
A
C
I
L
N
A
V
I
----------
I
-
Y
A
------
L
G
K
K
L
V
S
F
F
H-LNDSK-IGAG-------LG-----LGTSGH----------T
V
G
A
A
F
A
L
E
L
G
E
L
Q
----
G
A
M
A
A
I
---
A
V
---
V
V
I
G
-------
L
V
V
------------------
D
L
------------------------
V
I
P
I
F
S
-
H
L
I
GLL-----------------------------------------------------------------------------------------------------------------------------
19
Fugue
88.88
18%
-166
- C1 -
4R1D
-
?
B:
[1-301]
-------------------
M
D
--
K
T
G
W
I
T
H
C
F
G
R
F
L
I
D
L
P
P
D
A
-
V
I
N
A
G
Y
Y
L
W
----------------------
G
---
D
R
--------
I
E
Y
L
DDK
P
T
E
L
A
A
R
--------
V
D
R
L
E
Q
E
W
R
T
Q
R
H
K
S
K
G
N
M
F
L
R
K
I
D
FG
N
E
S
V
G
L
L
S
WSSEVASK
T
Y
L
L
D
T
Y
V
T
S
K
P
T
W
H
----
V
Y
R
W
K
G
----
K
V
S
VDR
E
Q
H
A
----
V
E
I
S
R
A
L
A
R
N
L
R
S
R
A
PKEIPS
E
P
G
F
C
I
D
H
A
---
Y
I
---
A
G
D
S
F
---------
Q
V
--
E
------------
R
F
G
V
G
V
T
F
P
E
--
H
P
G
-
A
R
F
E
----
F
R
S
S
T
G
A
E
-----------
L
N
S
L
L
E
R
V
D
G
F
V
Q
N
M
L
----------
S
T
F
A
------
G
M
E
T
L
R
K
G
K
H
-
P
V
G
S
L
-
P
G
E
E
Y
------
L
V
-----
A
G
S
D
K
G
----------
Q
R
G
Y
T
F
M
W
E
V
Q
G
K
E
----
E
S
L
T
E
P
----
N
---
L
T
A
G
-------
L
A
V
L
E
RSNENGKPPPPAFKS
D
K
E
------------------------
A
L
E
L
W
D
-
T
I
V
D
S
I
RVRPTS-----------------------------------------------------------------------------------------------------------------------
17
Fugue
84.79
16%
-170
- C5 -
4P0P
1
EME1_HUMAN
B:
[62-389]
---------------------
R
M
K
A
Q
R
P
E
E
C
L
K
H
I
I
V
V
L
D
P
V
L
L
Q
M
E
G
G
G
Q
L
L
G
A
L
Q
T
M
E
C
R
-------------
C
---
V
I
E
A
Q
AVPC
S
V
T
W
R
------
R
R
A
G
--------
P
S
E
D
R
E
D
W
V
E
E
P
------
T
V
L
V
L
L
R
--
A
E
A
F
V
S
M
I
----------------------
D
----
N
G
K
T
------------
L
Q
G
F
----
V
T
D
I
T
A
K
T
A
--------------
G
K
A
L
S
L
V
---
I
V
---
D
--
Q
E
---------
K
C
F
V
S
------------
R
V
D
A
E
E
A
L
V
D
--
L
Q
L
H
T
E
A
Q
----
A
Q
I
V
Q
S
W
K
-----------
E
L
A
D
F
T
C
A
F
T
K
A
V
A
E
A
----------
P
-
F
K
------
K
L
R
D
E
T
T
F
S
F
-
C
L
E
S
D
-
W
A
G
G
-------
V
K
-----
V
D
L
A
G
R
----------
G
L
A
L
V
W
R
R
Q
I
Q
Q
L
N
----
R
V
S
L
E
M
---
A
S
---
A
V
V
N
A
YPS
P
Q
L
L
V
Q
------------------
A
Y
Q
Q
CFS
D
K
E
R
Q
N
LLAD
I
Q
V
R
RTSRR
I
G
P
E
L
S
-
R
R
I
Y
L
Q
M
TTLQPHLSL-------------------------------------------------------------------------------------------------------------------
11
Fugue
81.49
18%
-124
- C2 -
19HC
15
CYC9_DESDA
A:
[1-292]
-------------------
A
A
L
E
P
T
D
-
S
G
A
P
S
A
I
V
M
F
P
V
G
E
K
P
N
P
K
G
A
A
---
M
K
P
V
V
F
N
H
L
I
-------------
H
---
E
K
K
I
AD----
C
E
T
C
------
H
H
T
G
--------
D
P
V
S
C
S
T
C
H
T
V
E
G
K
A
E
G
D
Y
I
T
--
L
D
--
R
A
M
H
A
T
D
I
----------------------
A
----
A
R
A
K
G
N
T
P
T
S
C
V
----
S
C
H
Q
----
S
E
T
K
E
R
R
E
C
--------------
A
G
C
H
A
I
T
---
T
P
---
K
D
D
E
A
---------
W
C
A
T
C
HDITPSMT
P
S
E
M
Q
K
G
I
A
G
T
L
L
P
--
G
D
N
-
E
A
L
A
----
A
E
T
V
L
A
E
A
-----------
T
V
A
P
V
S
P
M
L
A
P
Y
K
V
V
I
DALADKYEPS
D
-
F
T
------
H
R
R
H
L
T
S
L
M
E
S
I
K
D
D
K
-
L
A
Q
A
-------
F
H
DKPEI
L
C
A
T
C
H
HRSPLSLTPP
K
C
G
S
C
H
T
K
E
I
D
A
A
D
PGRP
N
L
M
A
A
Y
---
H
L
---
E
C
M
G
-------
C
H
K
------------------
G
M
------------------------
A
V
A
R
P
R
-
D
T
D
C
T
T
CHKAAA-----------------------------------------------------------------------------------------------------------------------
13
Fugue
80.14
13%
-143
* C6 *
4OMH
2
COTB2_STRMJ
A:
[13-292]
----------IGRSSVRPY
L
E
E
C
T
R
R
F
Q
E
M
F
D
R
H
V
V
T
R
P
T
K
V
E
L
T
D
A
E
L
R
E
V
I
D
D
C
N
A
A
V
A
P
LG
K
T
V
S
D
E
R
W
I
S
Y
V
---
G
V
--------
V
L
W
S
------
Q
S
P
R
--------
H
I
K
D
M
E
A
F
K
A
V
C
V
L
N
C
V
T
F
V
W
D
D
M
D
--
P
A
L
H
D
F
G
L
----------------------
F
----
L
P
Q
L
R
K
----
I
C
----
E
K
Y
Y
G
P
E
D
A
E
V
A
Y
E
A
A
R
--------------
A
L
V
T
S
D
H
---
M
F
RDS
P
I
K
A
A
---------
L
C
T
T
S
------------
P
E
Q
Y
F
R
F
R
V
T
--
D
I
G
-
V
D
F
W
----
M
K
M
S
Y
P
I
Y
-----------
R
H
P
E
F
T
E
H
A
K
T
S
L
A
A
R
----------
M
-
T
T
------
R
G
L
T
I
V
N
D
F
Y
-
S
Y
D
R
E
-
V
S
L
G
QITN
C
F
R
L
C
-----
D
V
S
D
E
T
----------
A
F
K
E
F
F
Q
A
R
L
D
D
M
I
----
E
D
I
E
C
I
---
K
A
FD
Q
L
T
Q
D
-------
V
F
L
------------------
D
L
------------------------
I
Y
G
N
F
V
-
W
T
T
S
N
------------------------------------------------------------------------------------------------------------------------------
14
Fugue
77.56
17%
-151
- C5 -
1GS5
3
ARGB_ECOLI
A:
[1-258]
-------------------
M
M
N
P
----------
L
I
I
K
L
G
G
V
L
L
D
S
E
E
A
L
E
R
L
F
S
A
L
V
N
Y
R
E
S
-------------
H
Q
R
P
L
V
--------
I
V
H
G
------
G
G
C
V
--------
V
D
E
L
M
K
G
L
N
L
P
V
K
K
K
N
G
L
R
V
----
T
--
P
A
D
Q
I
D
I
I
----------------------
T
----
G
A
L
A
G
T
----
A
N
----
K
T
L
L
----
A
W
A
K
K
H
Q
I
A
--------------
A
V
G
L
F
L
G
DGD
S
V
---
K
V
T
Q
L
---------
D
E
E
L
G
------------
H
V
G
L
A
Q
P
G
S
P
--
K
L
I
-
N
S
L
L
E
N
G
Y
L
P
V
V
S
S
I
G
V
T
DEG
Q
L
M
N
V
N
A
D
Q
A
A
T
A
L
A
A
T
L
G
A
D
L
----------
I
-
L
L
S
DVSGI
L
D
G
K
G
Q
R
I
A
E
-
M
T
A
A
K
-
A
E
Q
L
-------
I
E
-----
Q
G
I
--------------
I
T
D
G
M
I
V
K
V
N
A
A
L
----
D
A
A
R
T
L
G
R
P
V
D
---
I
A
S
W
-------
R
H
A
------------------
E
Q
------------------------
L
P
A
L
F
N
G
M
P
M
G
T
R
I
L
A--------------------------------------------------------------------------------------------------------------------------
20
Fugue
76.41
17%
-157
- C5 -
1TYF
-
CLPP_ECOLI
A:
[11-193]
--------------------
S
R
G
E
R
S
----------
F
D
I
Y
S
R
L
L
K
E
-
R
V
I
F
L
T
G
Q
V
E
D
H
M
A
N
-------------
L
---
I
V
A
Q
------
M
L
F
L
------
E
A
E
N
--------
P
E
K
D
I
Y
L
Y
I
N
S
---
P
G
G
------------
V
I
T
A
G
M
----------------------
S
----
I
Y
D
T
M
Q
----
F
I
----
K
P
D
--------
V
S
T
I
C
M
--------------
G
Q
A
A
S
M
G
---
A
F
---
L
L
T
A
--------------
G
------------
A
K
G
K
R
F
C
L
P
N
--
S
---
R
V
M
I
----
H
Q
P
L
G
G
Y
Q
-----------
G
Q
A
T
D
I
E
I
H
A
R
E
I
L
K
V
----------
K
-
G
R
------
M
N
E
L
M
A
L
H
T
G
-
Q
S
L
E
Q
-
I
E
R
D
-------
T
--------
E
R
D
R
----------
F
L
S
A
P
E
A
V
E
Y
G
---------------------------------
L
V
------------------
D
S
------------------------
I
L
T
H
R
N
------------------------------------------------------------------------------------------------------------------------------------
18
Fugue
74.41
13%
-132
* C5 *
2TPS
3
THIE_BACSU
A:
[2-227]
---------------HGIR
M
T
R
I
S
R
E
M
M
K
E
L
L
S
V
Y
F
I
M
G
S
N
N
T
K
A
D
-----
P
V
T
V
V
Q
K
A
L
K
G
-------------
G
---
A
T
--------
L
Y
Q
F
------
R
E
K
G
GDALTG
E
A
R
I
K
F
A
E
K
A
Q
A
A
C
R
E
A
G
V
P
F
I
V
N
--
D
--
D
V
E
L
A
L
N
L
----------------------
K
AD
G
I
H
I
G
Q
E
D
----
A
N
----
A
K
E
V
----
R
A
A
I
G
D
M
I
L
--------------
G
V
S
A
H
T
M
---
S
E
---
V
K
Q
A
E
---------
E
D
G
A
D
------------
Y
V
G
L
G
P
I
Y
P
T
--
E
T
K
----------
K
D
T
R
A
V
Q
-----------
G
V
S
L
I
E
A
V
R
R
Q
G
I
S
I
P
----------
I
-
V
G
------
I
G
G
--------
I
T
I
D
N
-
A
A
P
V
-------
I
Q
-----
A
G
A
D
G
V
----------
S
M
I
S
A
I
S
Q
A
E
D
P
E
S
----
A
A
R
K
F
R
---
E
E
---
I
Q
T
Y
-------
K
T
G
------------------
R
-------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
Fugue
71.33
14%
-146
- C6 -
1UDD
-
?
A:
[1-215]
---------------------------
M
R
V
M
I
T
D
K
L
R
R
D
S
E
Q
I
W
K
K
I
F
E
----
H
P
F
V
V
Q
L
Y
S
-------------
G
-----------------------------------------
T
L
P
L
E
K
F
K
F
Y
V
L
Q
D
F
N
Y
L
V
--
G
L
T
R
A
L
A
V
----------------------
I
----
S
S
K
A
E
Y
-----------
P
L
M
----
A
E
L
I
E
L
A
R
D
--------------
E
V
T
V
E
V
E
---
N
Y
---
V
K
L
L
K
---------
E
L
D
L
T
------------
L
E
D
A
I
K
T
E
P
T
--
L
V
N
-
S
A
Y
M
----
D
F
M
L
A
T
A
Y
-----------
K
G
N
I
I
E
G
L
T
A
L
L
P
C
F
W
----------
S
-
Y
A
E
-----
I
A
E
Y
H
K
D
K
L
R
D
N
P
I
K
I
-
Y
R
E
W
-------
G
K
-----
V
Y
L
S
---------------
N
E
Y
L
N
L
V
G
R
L
R
----
K
I
I
D
S
S
---
G
H
---
S
G
Y
D
-------
R
L
R
------------------
R
I
------------------------
F
I
T
G
S
K
-
F
E
L
A
F
W
E
M
A
W
R
GG----------------------------------------------------------------------------------------------------------------------
16
Fugue
61.58
9%
-130
- C3 -
2HEK
13
?
A:
[1-369]
M
I
K
E
F
S
D
PLYG
F
V
R
V
G
E
A
G
L
R
L
I
D
S
F
P
F
Q
R
L
R
Y
V
K
Q
L
G
L
A
Y
L
V
F
P
S
A
Q
-----
H
T
R
F
E
H
S
L
G
-------------
V
---
Y
H
--------
I
T
E
R
------
I
C
E
S
--------
L
K
V
K
E
K
E
L
V
K
L
A
G
L
L
H
-
D
L
G
H
P
P
F
S
--
H
T
T
E
V
L
L
P
----------------------
R
----
E
R
S
H
E
D
----
F
T
----
E
R
V
I
----
K
E
-------------------------
T
E
I
---
Y
E
---
I
L
K
Q
D
---------
Y
S
H
E
D
------------
I
E
R
L
V
R
I
T
L
G
--
K
P
E
-
D
E
E
E
----
K
L
L
S
E
I
I
T
-----------
G
E
F
G
S
D
R
M
D
Y
L
R
R
D
A
Y
----------
F
-
C
G
------
V
S
Y
G
F
F
D
Y
D
R
-
L
I
S
T
L
-
R
V
Y
E
-------
N
K
-----
V
V
V
D
E
S
----------
G
L
R
A
L
E
N
F
L
I
S
R
Y
F
----
M
Y
V
Q
V
Y
---
F
H
---
K
V
V
R
-------
I
L
S
------------------
I
H
------------------------
L
V
E
F
L
K
-
K
L
I
S
Q
E
DFTD
I
N
N
F
L
R
LN
D
A
F
V
I
S
E
L
F
K
RKAF
R
E
D
F
E
R
I
FQRKHFKTLLSTEN
Y
E
K
F
S
E
T
K
E
R
L
L
E
K
FPQEK
V
R
F
D
E
V
E
K
E
VYGGN
I
Y
V
L
S
SEGLKK
A
H
E
L
S
P
LIAS
L
K
P
I
K
L
Y
R
I
Y
V
DRQL
W
E
K
A
R
S
E
L
K
3
HHSearch
45.66
6%
-128
- C4 -
2NWL
1
?
A:
[198-303]
-------------------------------------------------------------------------------------------------------------------------------
V
N
G
V
M
Q
Y
A
P
--
I
G
V
F
A
L
I
A
----------------------
Y
----
V
M
A
E
Q
G
V---
H
V
----
V
G
E
L
----
A
K
V
T
A
A
V
Y
V
--------------
G
L
T
L
Q
I
L
L--
V
Y
---
F
V
L
L
K
I
Y
GID
P
I
S
F
I
K
H
A
K
------------
D
A
M
L
T
A
F
V
T
R
SS
S
G
T
-
L
P
V
T
----
M
R
V
A
K
E
M
G
-----------
I
S
E
G
I
Y
S
F
T
L
P
L
G
A
T
I
----------
N
-
M
D
------
G
T
A
L
Y
Q
G
V
C
T
-
F
F
I
A
N
-
A
L
G
S
-------
H
L
-----
T
V
G
Q
Q
L
----------
T
I
V
L
T
A
V
L
A
S
I
G
T
A
----
G
V
P
G
A
G
---
A
I
---
M
L
A
M
-------
V
L
H
------------------
S
V
------------------------
G
L
P
L
T
D
-
P
N
V
A
A
A
-----------------------------------------------------------------------------------------------------------------------------
2
HHSearch
44.22
16%
-76
- C4 -
2ZY9
1
MGTE_THET8
A:
[363-458]
---------------------------------------------------------------------------------------------------------------------------------------------
R
A
L
A
T
----------------------
R
----
D
L
D
L
R
D
----
W
R
----
R
V
F
L
----
K
E
M
G
V
G
L
L
L
--------------
G
L
T
L
S
F
L
---
L
V
---
G
K
-
V
Y
---------
W
D
G
--------------------------
H
P
---------------
L
L
L
-----------
P
V
V
G
V
S
L
V
L
I
V
F
F
A
N
L
----------
V
-
G
A
------
M
L
P
F
L
L
R
R
L
G
-
V
--
D
P
A
L
V
S
N
-------
P
L
-----
V
A
T
L
S
D
----------
V
T
G
L
L
I
Y
L
S
V
A
R
L
L
----
L
E
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
44.11
39%
-45
- C4 -
2FKN
1
HUTU_BACSU
A:
[459-504]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
S
D
A
V
G
D
W
A
-
V
L
N
A
L
V
----------
N
-
T
A
------
A
G
A
S
W
V
S
F
H
H
--------
G
G
G
-------
V
G
-----
M
G
Y
S
L
H
----------
A
G
M
V
A
V
A
D
G
S
E
L
A
D
----
E
R
L
A
R
V
---
L
T
---
S
D
P
G
-------
M
G
I
------------------
I
R
------------------------
H
A
D
A
G
Y
-
E
R
A
V
E
V
-----------------------------------------------------------------------------------------------------------------------------
8
HHSearch
37.16
6%
-128
- C4 -
3RLB
4
?
A:
[93-142]
----------------------------------------------------------------------------------------------------------------------------------
L
E
Y
L
V
A
--
P
V
S
L
G
I
-
A
----------------------
G
----
L
F
R
Q
K
T
----
A
-----
P
L
K
L
----
A
P
V
L
L
G
T
F
V
--------------
A
V
L
L
K
Y
F
---
F
H
---
F
I
A
G
I
---------
I
F
W
S
Q
------------
Y
A
W
K
G
W
G
A
V
A
--
Y
S
L
-
A
V
N
G
----
I
S
G
I
L
T
A
I
-----------
A
A
F
V
I
L
I
I
F
V
K
K
F
P
K
L
----------
F
-
I
H
------
S
N
Y
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
HHSearch
33.21
29%
48
- C4 -
2YUK
-
A:
[11-34]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
S
T
L
K
W
E
K
E
E
A
L
----
G
E
M
A
T
V
---
A
P
---
V
L
Y
T
-------
N
I
N
------------------
F
P
------------------------
N
L
K
E
E
F
-
P
D
W
T
T
R
-----------------------------------------------------------------------------------------------------------------------------
10
HHSearch
22.31
15%
84
- C4 -
1V54
-
COX7C_BOVIN
L:
[15-47]
---------------------------------------------------------------------------------------------------------------------------
V
E
N
K
W
R
L
L
A
M
M
T
L
--
F
F
G
S
G
F
A
A
----------------------
P
----
F
F
I
V
R
H
----
Q
L
----
L
K
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
HHSearch
4.12
24%
207
* C4 *
2LK9
-
BST2_HUMAN
A:
[25-41]
---------------------------------------------------------------------------------------------------------------------------------
G
I
G
I
L
V
L
--
L
I
I
V
I
L
G
V
----------------------
P
----
L
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------