@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0270: (2015-11-29 )
MIKFEHVSKVYGEKEALSDLTLSIKDGEIFGLIGHNGAGKTTTISILTSIIDATYGQVYIDDLLLTEHRDQIKKKIGYVPDSPDIFLNLTAEEYWYFLAKIYDVAPEDIEARITKLVDIFELEEQRYNPIESFSHGMRQKVIVIGALLPNPDIWILDEPLTGLDPQASFDLKEMMKEHAKNGKTVIFSTHVLAVAEQLCDRIGILKQGKLIFVGSLGELKMQYPDKDLETIYLELAGRQANREG

Atome Classification :

(21 SA) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10--.-.--.----.----....20........30........40........50........60..---....---.----.70---..-----..-.....80........90..-------......100.-......110...--....120......-.130---.........140.......150.......160.......170-.....-..180........190.......200.......210.......220....--..-------.230.......240..---------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIKFEHVSKVY--G-E--K----E----ALSDLTLSIKDGEIFGLIGHNGAGKTTTISILTSIIDATYGQVYIDDL---LLTE---H----RD----QI-----KK-KIGYVPDSPDIFLNLTAEE-------YWYFLAKIYD-VAPEDIEARITK--LVDIFELEEQRYN-PI-----ESFSHGMRQKVIVIGALLPNPDIWILDEPLTGLDPQASFDLK-EMMKE-HAK-NGKTVIFSTHVLAVAEQLCDRIGILKQGKLIFVGSLGELKMQYPDK--DL-------ETIYLELAGRQANREG---------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 92.2033%-119 - C1 -4RVC - ? A:[3-239] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLEVKDLSGGY--T-A--Q----N----VLEDVTFVVDRGEMVALIGLNGAGKSTTIKHIIGLMEPRRGAISINGY---RLAD---G----PE----TY-----RR-QFAYIPETPVLYEELTLEE-------HLRLAAMAYG-LSEAEYERRLPP--LLREFRLERRLSS-FP-----AHFSKGMKQKVMIVCAFLLEPPLYIIDEPFLGLDPLAIHALL-ERMNE-QKA-KGAGILLSTHILATAERYCDSFVILHNGRVKAKGTLDDIRRQFGLRGASL-------DELYVELTK----------------------------------------------------------------------------------------------------------
44 HHSearch 91.9332%-119 - C1 -1VPL ? A:[16-251] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVVKDLRKRI--G-K--K----E----ILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGK---NVVE---E----PH----EV-----RK-LISYLPEEAGAYRNMQGIE-------YLRFVAGFYA-SSSSEIEEMVER--ATEIAGLGEKIKD-RV-----STYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVR-KILKQ-ASQ-EGLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKERYKAQ--NI-------EEVFEEVVK----------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 88.3933%-113 - C1 -1VPL ? A:[23-251] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KRI--G-K--K----E----ILKGISFEIEEGEIFGLIGPNGAGKTTTLRIISTLIKPSSGIVTVFGK---NVVE---E----PH----EV-----RK-LISYLPEEAGAYRNMQGIE-------YLRFVAGFYA-SSSSEIEEMVER--ATEIAGLGEKIKD-RV-----STYSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVR-KILKQ-ASQ-EGLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKERYKAQ--NI-------EEVFEEVVK----------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 83.7732%-110 - C1 -4QC2 ? A:[7-235] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNLAKAY--K-G--R----R----VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPL---H-----A----RA-----RR-GIGYLPQEASIFRRLSVYD-------NLMAVLQIRDDLSAEQREDRANE--LMEEFHIEHLRDS-MG-----QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIK-RIIEH-LRD-SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI---LQDE--HV-------KRVYLG-------------------------------------------------------------------------------------------------------------
21 PsiBlast_CBE 82.9332%-112 - C1 -4QC2 ? B:[7-235] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNLAKAY--K-G--R----R----VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPL---H-----A----RA-----RR-GIGYLPQEASIFRRLSVYD-------NLMAVLQIRDDLSAEQREDRANE--LMEEFHIEHLRDS-MG-----QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIK-RIIEH-LRD-SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI---LQDE--HV-------KRVYLG-------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 82.7532%-111 - C1 -4P32 LPTB_ECOLI A:[6-234] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNLAKAY--K-G--R----R----VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPL---H-----A----RA-----RR-GIGYLPQEASIFRRLSVYD-------NLMAVLQIRDDLSAEQREDRANE--LMEEFHIEHLRDS-MG-----QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIK-RIIEH-LRD-SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI---LQDE--HV-------KRVYL--------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 80.5831%-112 - C1 -4P33 LPTB_ECOLI A:[6-234] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNLAKAY--K-G--R----R----VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPL---H-----A----RA-----RR-GIGYLPQEASIFRRLSVYD-------NLMAVLQIRDDLSAEQREDRANE--LMEEFHIEHLRDS-MG-----QSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIK-RIIEH-LRD-SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI---LQDE--HV-------KRVYLG-------------------------------------------------------------------------------------------------------------
22 PsiBlast_CBE 80.3032%-110 - C1 -4P32 LPTB_ECOLI B:[6-230] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNLAKAY--K-G--R----R----VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPL---H-----A----RA-----RR-GIGYLPQEASIFRRLSVYD-------NLMAVLQIRDDLSAEQREDRANE--LMEEFHIEHLRDS-MG-----QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIK-RIIEH-LRD-SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI---LQDE--HV-------K------------------------------------------------------------------------------------------------------------------
23 PsiBlast_CBE 79.6231%-109 - C1 -4P33 LPTB_ECOLI B:[6-234] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNLAKAY--K-G--R----R----VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPL---H-----A----RA-----RR-GIGYLPQEASIFRRLSVYD-------NLMAVLQIRDDLSAEQREDRANE--LMEEFHIEHLRDS-MG-----QSLSGGERRRVEIARALAANPKFILLDQPFAGVDPISVIDIK-RIIEH-LRD-SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI---LQDE--HV-------KRVYLG-------------------------------------------------------------------------------------------------------------
56 Fugue 78.5528%-111 - C1 -1OXS ? C:[1-352] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVRIIVKNVSKVFKKG-K--V----V----ALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDR---LVAS---N----GKLIVPPE-----DR-KIGMVFQTWALYPNLTAFE-------NIAFPLTNMK-MSKEEIRKRVEE--VAKILDIHHVLNH-FP-----RELSGGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSAR-ALVKEVQSR-LGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSI--QV-------ASLIGEINELEGKVTNEGVVIGSLRFPVSVSSDRAIIGIRPEDVKLSKDVIKDDSWILVGKGKVKVIGYQGGLFRITITPLDSEEEIFTYSDHPIHSGEEVLVYVRKDKIKVFEK
61 Fugue 77.5425%-105 - C1 -1Z47 ? A:[11-355] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSMTIEFVGVEKIYP-G-G--A----R----SVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGK---RVTD--------LP----PQ-----KR-NVGLVFQNYALFQHMTVYD-------NVSFGLREKR-VPKDEMDARVRE--LLRFMRLESYANR-FP-----HELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELR-TFVRQVHDE-MGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTL--FVASFIGESNVWTRAVQNGRIEVAGAALPVDPAVSEGSEVAVVVRPKDVELQPASEREAHAQVVRSAFKGSYSACWIRTKDGEVWEVHVPSADRHRWSPGAWVHMNVTRWFIFPR---------
41 HHSearch 75.9430%-109 - C1 -1OXX ? K:[3-234] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RIIVKNVSKVF--K-KGKV----V----ALDNVNINIENGERFGILGPSGAGKTTFMRIIAGLDVPSTGELYFDDR---LVAS---NGKLIVP----PE-----DR-KIGMVFQTWALYPNLTAFE-------NIAFPLTNMK-MSKEEIRKRVEE--VAKILDIHHVLNH-FP-----RELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSAR-ALVKE-VQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSI--QV-------ASLIGEINELEGKVTN---------------------------------------------------------------------------------------------------
35 HHSearch 72.9529%-112 - C1 -1V43 - ? A:[12-236] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EVKLENLTKRF--G-N--F----T----AVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDR---DVTY---L----P-----PK-----DR-NISMVFQ------HMTVYE-------NIAFPL--KK-FPKDEIDKRVRW--AAELLQIEELLNR-YP-----AQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMR-AEIKK-LQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSV--FV-------ATFIGAPEMNILEVSV---------------------------------------------------------------------------------------------------
64 Fugue 72.8427%-100 - C1 -3B60 MSBA_SALTY A:[10-581] WQTFRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVIDRATGDLEFRNVTFTYPGR-E--V----P----ALRNINLKIPAGKTVALVGRSGSGKSTIASLITRFYDIDEGHILMDGH---DLREY--T----LA----SL-----RN-QVALVSQNVHLFNDTVANN-------IAY--ARTEE-YSREQIEEAARMAYAMDFINKMDNGLD-TIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQ-AALDE-LQK--NRTSLVIAHRLSTIEQ-ADEIVVVEDGIIVERGTHSELLAQ---------------HGVYAQLHKMQFG------------------------------------------------------------------------------------------------------
51 HHSearch 72.4327%-113 - C1 -2OLJ ? A:[24-252] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIDVHQLKKSF--G-S--L----E----VLKGINVHIREGEVVVVIGPSGSGKSTFLRCLNLLEDFDEGEIIIDGI---NLKAKDTN----LN----KV-----RE-EVGMVFQRFNLFPHMTVLN-------NITLAPMKVRKWPREKAEAKAME--LLDKVGLKDKAHA-YP-----DSLSGGQAQRVAIARALAMEPKIMLFDEPTSALDPEMVGEVL-SVMKQ-LAN-EGMTMVVVTHEMGFAREVGDRVLFMDGGYIIEEGKPEDLFDRPQHE--RT-------KAFLSKVF-----------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 71.9229%-122 - C1 -2D62 ? A:[7-230] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKLINIWKRF--G-D--V----T----AVKDLSLEIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTRGQIYIEDN---LVAD---P----EK----GVFVPPKER-DVAMVFQSYALYPHMTVYD-------NIAFPLKLRK-VPKQEIDKRVRE--VAEMLGLTELLNR-KP-----RELSGGQRQRVALGRAIIRRPKVFLMDEPLSNLDAKLRVKMRAELKKL-QRQ-LGVTTIYVTHDQVEAMTMGDRIAVMNKGELQQVGTPDEVYYKPVNT--FV-------AGFIGSPPMNFLDATI---------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 71.1230%-110 - C1 -1V43 - ? A:[13-233] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VKLENLTKRF--G-N--F----T----AVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAGLEEPTEGRIYFGDR---DVT----Y----LP----PK-----DR-NISMVFQ------HMTVYE-------NIAFPL--KK-FPKDEIDKRVRW--AAELLQIEELLNR-YP-----AQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKL-QQK-LKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLRPNSV--FV-------ATFIGAPEMNILEVSV---------------------------------------------------------------------------------------------------
34 HHSearch 71.0326%-110 - C1 -1Z47 ? A:[15-239] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IEFVGVEKIY--PGG--A----R----SVRGVSFQIREGEMVGLLGPSGSGKTTILRLIAGLERPTKGDVWIGGK---RVTD---L-----P----PQ-----KR-NVGLVFQNYALFQHMTVYD-------NVSFGLREKR-VPKDEMDARVRE--LLRFMRLESYANR-FP-----HELSGGQQQRVALARALAPRPQVLLFDEPFAAIDTQIRRELR-TFVRQ-VHDEMGVTSVFVTHDQEEALEVADRVLVLHEGNVEQFGTPEEVYEKPGTL--FV-------ASFIGESNVWTRAVQN---------------------------------------------------------------------------------------------------
33 PsiBlast_CBE 70.9031%-117 - C1 -3TIF Y796_METJA A:[1-223] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVKLKNVTKTY--K-M--G----EEIIYALKNVNLNIKEGEFVSIMGPSGSGKSTMLNIIGCLDKPTEGEVYIDNI---KTND---L----DDDELTKI-----RRDKIGFVFQQFNLIPLLTALENVELPLIFKYRGA-----MSGEERRKRALE--CLKMAELEERFANHKP-----NQLSGGQQQRVAIARALANNPPIILADQPTWALDSKTGEKIM-QLLKKLNEE-DGKTVVVVTHDINVA-RFGERIIYLKDGEVEREEKLR---------------------------------------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 70.8524%-115 - C1 -3DHW - METN_ECOLI C:[1-242] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MIKLSNITKVF--H-Q--GTRTIQ----ALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPTEGSVLVDGQ---ELTT---L----SESELTKA-----RR-QIGMIFQHFNLLSSRTVFG-------NVALPLELDN-TPKDEVKRRVTE--LLSLVGLGDKHDS-YP-----SNLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSIL-ELLKDINRR-LGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEV-FSHPKT--PL-------AQKFIQSTLHLDIPED---------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 48.9032% -11 - C1 -4P31 LPTB_ECOLI A:[6-234] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KNLAKAY--K-G--R----R----VVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRDAGNIIIDDDDISLLPL---H-----A----RA-----RR-GIGYLPQEASIFRRLSVYD-------NLMAVLQIRDDLSAEQREDRANE--LMEEFHIEHLRDS-MG-----QSLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIK-RIIEH-LRD-SGLGVLITDHNVRETLAVCERAYIVSQGHLIAHGTPTEI---LQDE--HV-------KRVYL--------------------------------------------------------------------------------------------------------------