@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0412: (2015-11-30 )
MRVRKRKGAEEHLENNPHYVISNPEEAKGRWHEIFGNNNPIHIEVGSGKGAFITGMAEQNPDINYIGIDIQLSVLSYALDKVLDSGAKNIKLLLVDGSSLSNYFDTGEVDLMYLNFSDPWPKKKHEKRRLTYKTFLDTYKDILPEQGEIHFKTDNRGLFEYSLASFSQYGMTLKQVWLDLHASDYQQNIMTEYERKFSNKGQVIYRVEARF

Atome Classification :

(20 SA) .........10........20........30........40........50........60.........70........80.------.--------..------..-..90......-..-100........110...----....120..-----------------.....130.......140.......150...------------------..------------..160.......-170........180.--......190.......200.......210
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MRVRKRKGAEEHLENNPHYVISNPEEAKGRWHEIFGNNNPIHIEVGSGKGAFITGMAEQN-PDINYIGIDIQLSVLSYALDKV------L--------DS------GA-KNIKLLLVDG-SS-LS-NYFDTGEVDLMYLN----FSDPWPKKK-----------------HEKRRLTYKTFLDTYKDILPEQGEIHFKTDN------------------RG------------LFEYSLASFSQY-G-MTLKQVWLDLHAS--DYQQNIMTEYERKFSNKGQVIYRVEARF
32 HHSearch 98.8478%-107 - C1 -1YZH - TRMB_STRPN A:[11-214] -------GATELLEANPQYVVLNPLEAKAKWRDLFGNDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKV------L--------EV------GV-PNIKLLWVDG-SD-LT-DYFEDGEIDRLYLN----FSDPWPKKR-----------------HEKRRLTYKTFLDTFKRILPENGEIHFKTDN------------------RG------------LFEYSLVSFSQY-G-MKLNGVWLDLHAS--DFEGNVMTEYEQKFSNKGQVIYRVEAEF
1 PsiBlast_PDB 98.2976%-107 - C1 -1YZH - TRMB_STRPN A:[11-214] -------GATELLEANPQYVVLNPLEAKAKWRDLFGNDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKV------L--------EV------GV-PNIKLLWVDG-SD-LT-DYFEDGEIDRLYLN----FSDPWPKKR-----------------HEKRRLTYKTFLDTFKRILPENGEIHFKTDN------------------RG------------LFEYSLVSFSQY-G-MKLNGVWLDLHAS--DFEGNVMTEYEQKFSNKGQVIYRVEAEF
33 HHSearch 89.5059%-100 - C1 -2FCA TRMB_BACSU A:[9-211] --------WDDFLAENADIAISNPADYKGKWNTVFGNDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKV------K--------DS------EA-QNVKLLNIDA-DT-LT-DVFEPGEVKRVYLN----FSDPWPKKR-----------------HEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN------------------RG------------LFEYSLKSFSEY-G-LLLTYVSLDLHNS--NLEGNIMTEYEEKFSALGQPIYRAEVEW
2 PsiBlast_PDB 89.5059%-100 - C1 -2FCA TRMB_BACSU A:[9-211] --------WDDFLAENADIAISNPADYKGKWNTVFGNDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKV------K--------DS------EA-QNVKLLNIDA-DT-LT-DVFEPGEVKRVYLN----FSDPWPKKR-----------------HEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN------------------RG------------LFEYSLKSFSEY-G-LLLTYVSLDLHNS--NLEGNIMTEYEEKFSALGQPIYRAEVEW
21 PsiBlast_CBE 86.1459% -93 - C1 -2FCA TRMB_BACSU B:[11-211] ----------DFLAENADIAISNPADYKGKWNTVFGNDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKV------K--------DS------EA-QNVKLLNIDA-DT-LT-DVFEPGEVKRVYLN----FSDPWPKKR-----------------HEKRRLTYSHFLKKYEEVMGKGGSIHFKTDN------------------RG------------LFEYSLKSFSEY-G-LLLTYVSLDLHNS--NLEGNIMTEYEEKFSALGQPIYRAEVEW
35 HHSearch 63.0123% -55 - C1 -3CKK TRMB_HUMAN A:[46-228] -------------------------------------AQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRI------R--------ALRAAPAGGF-QNIACLRSNA-MK-HLPNFFYKGQLTKMFFL----FPD----------------------------IISPTLLAEYAYVLRVGGLVYTITDV------------------LE------------LHDWMCTHFEEH-PLFERVPL-EDLSEDPVVGHLGTSTEEGKKVLRNGGKNFPAIFRR
3 PsiBlast_PDB 61.7128% -85 - C1 -3DXX - TRMB_ECOLI A:[30-164] ---------------------------------LFGREAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASA------H--------EE------GL-SNLRVMCHDAVEV-LH-KMIPDNSLRMVQLF----FPDPWHKAR-----------------HNKRRIVQVPFAELVKSKLQLGGVFHMATDW------------------EP------------YAEHMLEVMSSI-D-GYKNLSESNDYVP--RPASRPVTKFEQRGHRLGHGVWDLMFER
4 PsiBlast_PDB 60.4128% -85 - C1 -3DXY TRMB_ECOLI A:[30-164] ---------------------------------LFGREAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASA------H--------EE------GL-SNLRVMCHDAVEV-LH-KMIPDNSLRMVQLF----FPDPWHKAR-----------------HNKRRIVQVPFAELVKSKLQLGGVFHMATDW------------------EP------------YAEHMLEVMSSI-D-GYKNLSESNDYVP--RPASRPVTKFEQRGHRLGHGVWDLMFER
5 PsiBlast_PDB 59.7828% -85 - C1 -3DXZ TRMB_ECOLI A:[30-164] ---------------------------------LFGREAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASA------H--------EE------GL-SNLRVMCHDAVEV-LH-KMIPDNSLRMVQLF----FPDPWHKAR-----------------HNKRRIVQVPFAELVKSKLQLGGVFHMATDW------------------EP------------YAEHMLEVMSSI-D-GYKNLSESNDYVP--RPASRPVTKFEGHGVWDLMFERVKLE--
7 PsiBlast_PDB 57.7725% -83 - C1 -3CKK TRMB_HUMAN A:[52-186] -------------------------------------------DIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAP--------AG------GF-QNIACLRSNAMKH-LP-NFFYKGQLTKMFFL----FPD----------------------------IISPTLLAEYAYVLRVGGLVYTITDV------------------LE------------LHDWMCTHFEEH-P-LFERVPLEDLSED--PVVGHLGTSTEEGKKVLRNGGKNFPAIF
34 HHSearch 57.2523% -58 * C1 *3DXY TRMB_ECOLI A:[22-207] -------------------------EDMLDFPALFGREAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASA------H--------EE------GL-SNLRVMCHDA-VE-VLHKMIPDNSLRMVQLF----FPDPWHKAR-----------------HNKRRIVQVPFAELVKSKLQLGGVFHMATDW------------------EP------------YAEHMLEVMSSIDG-YKNLSESNDYVPR---PASRPVTKFEQRGHRLGHGVWDLMFER
39 HHSearch 56.7318% -96 - C1 -3DH0 ? A:[37-178] -------------------------------------EGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKV------N--------KL------GL-KNVEVLKSEE-NK-IP---LPDNTVDFIFMA----FTFHELSE-------------------------PLKFLEELKRVAKPFAYLAIIDWK------------------KEERDKGPPPEEVYSEWEVGLILEDA-G-IRVGRVVEVGKYC--FGVYAMIV--------------------
6 PsiBlast_PDB 55.5924% -86 - C1 -2VDU TRMB_YEAST E:[63-199] -------------------------------------------DIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRI------IALRNNTASKH------GF-QNINVLRGNA-MKFLP-NFFEKGQLSKMFFC----FPDP--------------------------RIITNTLLSEYAYVLKEGGVVYTITDV------------------KD------------LHEWMVKHLEEH-P-LFERLSKEWEEND--ECVKIMRNATDKFVACFTRLPTPAIL--
46 HHSearch 54.6717% -70 - C1 -2B3T PRMC_ECOLI A:[109-264] -------------------------------------QPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNA------Q--------HL------AI-KNIHILQSDW-FS-A----LAGQQFAMIVSN----PPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLEHGW-------------------Q------------QGEAVRQAFILA-G-YHDVETCRDYGDN--ERVTLGRYY-------------------
40 HHSearch 52.4713% -84 - C1 -3E05 ? A:[40-166] -------------------------------------DDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNL------K--------KF------VA-RNVTLVEAFA-PE-GL---DDLPDPDRVFIG----GSGGM----------------------------LEEIIDAVDRRLKSEGVIVLNAVT------------------LD------------TLTKAVEFLEDH-G-YMVEVACVNVAKT--KEYKMFESHNPVYIITAWKS--------
43 HHSearch 51.5117% -75 - C1 -3MQ2 KAMB_STRSD A:[27-181] -------------------------------------YDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKA------AAKPA----KG------GL-PNLLYLWATA-ER-LP---PLSGVGELHVLMPWGSLLRGVLGS-------------------------SPEMLRGMAAVCRPGASFLVALNLHAWRPSVPEVGEHPEPTPDS------------ADEWLAPRYAEA-G-WKLADCRYLEPEE--VAGLETSWTRRLHSSRDRFDVLALTGTI
37 HHSearch 50.7921% -93 - C1 -3DLC ? A:[43-148] -------------------------------------TAGTCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNI------A--------DA------NLNDRIQIVQGDV-HN-IP---IEDNYADLIVSR----GSVFFWED-------------------------VATAFREIYRILKSGGKTYIGGGF------------------GN------------KELRDSISAEMI-R-KNPDWKEFNRKNI--SQENVERFQNVLDEIGISSYEIILGDEG
8 PsiBlast_PDB 50.1732%-102 - C1 -3MGG - ? A:[40-111] ------------------------------------------LEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENT------E--------KN------GI-KNVKFLQANI-FS-LP---FEDSSFDHIFVC----FVLEHLQSP-----------------EEALKSLKKVLKPGGTITVIEGDHGSCYFHP------------------EG------------KKAIEAWNCLIR-V-QAYMKGNSLVGRQ--IYPLLQESGFEKIRVEPRMVYIDSSKPE
45 HHSearch 49.2314% -78 - C1 -1XXL YCGJ_BACSU A:[21-124] -------------------------------------AEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFA------Q--------EK------GV-ENVRFQQGTA-ES-LP---FPDDSFDIITCR----YAAHHFSD-------------------------VRKAVREVARVLKQDGRFLLVDHY------------------AP------------EDPVLDEFVNHL-N-RLRDPSHVRESSL--SEWQAMFSANQLAYQDIQKWNLPIQYDS
44 HHSearch 48.5116% -80 - C1 -2NXC - PRMA_THET8 A:[120-241] -------------------------------------PGDKVLDLGTGSGVLAIAAEKLG---GKALGVDIDPMVLPQAEANA------K--------RN------GV--RPRFLEGSL-EA-A----LPFGPFDLLVAN----LYAEL----------------------------HAALAPRYREALVPGGRALLTGIL------------------KD------------RAPLVREAMAGA-G-FRPLEEAAEGEWV--LLAYGR----------------------