@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0440: (2015-11-30 )
MNRKIIGLTLLSLSVLTLTACGNRSDKSANKSDIKVAMVTNQGGVDDKSFNQSAWEGLQKWGKKKGLTKGNGFDYFQSSNESDHANNLDTAASSGYNLIFGIGFGLHDTIEKVSENNKDVKYVIVDDIIKGKENVASVTFADNEAAYLAGVAAAKTTKTKTVGFIGGMEGVVVKRFEAGFKAGVKSIDPAIKVAVSYAGSFTDAAKGKTIAATQYATGVDVIYQAAGGTGAGIFSEAKTENETRKESNKVWVIGVDRDQSQEGNYVSKDGKKANFVLASTIKEVGKSLQSVAELTEKKQYPGGKVTVFGLKDSGVDIKEHQLSSEGSVAVKKAKEDIVSGKIQVPMK

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70.......--.-80-........90........100-.......-.-.---110.......120.......---130------........140.......150.....----.---.---160.......170-........180.......190.....-..-----.200........210....--...220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......-..320.--......---..330.......340..---...----------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MNRKIIGLTLLSLSVLTLTACGNRSDKSANKSDIKVAMVTNQGGVDDKSFNQSAWEGLQKWGKKKGLTKGNGFDYFQS--S-NE-SDHANNLDTAASSGYNLIF---GIGFGLH-D-T---IEKVSENNKDVKYVIVDDII---KG-------KENVASVTFADNEAAYLAGVAAAKTT----K---T---KTVGFIGGMEG-V-VVKRFEAGFKAGVKSIDPAI-KVAVS-YA-----GSF-TDAAKGKTIAATQYA--TGVDVIYQAAGGTGAGIFSEAKTENETRKESNKVWVIGVDRDQSQEGNYVSKDGKKANFVLASTIKEVGKSLQSVAELTEKKQYPGGKVTVFGL--KDSGVDI-KEH--Q--LSSEGS---VAVKKAKEDIVSGKIQV---PMK----------------------------------
30 Fugue 95.7038% -60 - C3 -2FQX TMPC_TREPA A:[3-318] -------------------------------GDFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNA----KCKYVTA--S-TD-AEYVPSLSAFADENMGLVV---ACGSFLV-E-A---VIETSARFPKQKFLVIDAVV---QD-------RDNVVSAVFGQNEGSFLVGVAAALKA----KEAGK---SAVGFIVGMEL-G-MMPLFEAGFEAGVKAVDPDI-QVVVE-VA-----NTF-SDPQKGQALAAKLYD--SGVNVIFQVAGGTGNGVIKEARDRRLNGQ---DVWVIGVDRDQYMDGVY----DGSKSVVLTSMVKRADVAAERISKMAYDGSFPGGQSIMFGL--EDKAVGI-PEENPN--LSSAVM---EKIRSFEEKIVSKEIVV---PVRSARMMN----------------------------
2 PsiBlast_PDB 95.3237% -61 - C3 -2FQX TMPC_TREPA A:[4-312] --------------------------------DFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAK----CKYVTA--S-TD-AEYVPSLSAFADENMGLVV---ACGSFLV-E-A---VIETSARFPKQKFLVIDAVV---QD-------RDNVVSAVFGQNEGSFLVGVAAALKA----K---EAGKSAVGFIVGMEL-G-MMPLFEAGFEAGVKAVDPDI-QVVVE-VA-----NTF-SDPQKGQALAAKLYD--SGVNVIFQVAGGTGNGVIKEAR---DRRLNGQDVWVIGVDRDQYMDGVY---DGSKS-VVLTSMVKRADVAAERISKMAYDGSFPGGQSIMFGL--EDKAVGI-PEENPN--LSSAVM---EKIRSFEEKIVSKEIVV---PVR----------------------------------
3 PsiBlast_PDB 95.2937% -61 - C3 -2FQY TMPC_TREPA A:[4-312] --------------------------------DFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAK----CKYVTA--S-TD-AEYVPSLSAFADENMGLVV---ACGSFLV-E-A---VIETSARFPKQKFLVIDAVV---QD-------RDNVVSAVFGQNEGSFLVGVAAALKA----K---EAGKSAVGFIVGMEL-G-MMPLFEAGFEAGVKAVDPDI-QVVVE-VA-----NTF-SDPQKGQALAAKLYD--SGVNVIFQVAGGTGNGVIKEAR---DRRLNGQDVWVIGVDRDQYMDGVY---DGSKS-VVLTSMVKRADVAAERISKMAYDGSFPGGQSIMFGL--EDKAVGI-PEENPN--LSSAVM---EKIRSFEEKIVSKEIVV---PVR----------------------------------
10 HHSearch 95.1038% -63 - C3 -2FQX TMPC_TREPA A:[3-311] -------------------------------GDFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAK----CKYVTA--S-TD-AEYVPSLSAFADENMGLVV---ACGSFLV-E-A---VIETSARFPKQKFLVIDAVV---QD-------RDNVVSAVFGQNEGSFLVGVAAALKAKEA-G---K---SAVGFIVGMEL-G-MMPLFEAGFEAGVKAVDPDI-QVVVE-VA-----NTF-SDPQKGQALAAKLYD--SGVNVIFQVAGGTGNGVIKEARDRRLN---GQDVWVIGVDRDQYMDGVYDG----SKSVVLTSMVKRADVAAERISKMAYDGSFPGGQSIMFGL--EDKAVGI-PEE--NPNLSSAVM---EKIRSFEEKIVSKEIVV---PVR----------------------------------
1 PsiBlast_PDB 95.0937% -63 - C3 -2FQW TMPC_TREPA A:[4-312] --------------------------------DFVVGMVTDSGDIDDKSFNQQVWEGISRFAQENNAK----CKYVTA--S-TD-AEYVPSLSAFADENMGLVV---ACGSFLV-E-A---VIETSARFPKQKFLVIDAVV---QD-------RDNVVSAVFGQNEGSFLVGVAAALKA----K---EAGKSAVGFIVGMEL-G-MMPLFEAGFEAGVKAVDPDI-QVVVE-VA-----NTF-SDPQKGQALAAKLYD--SGVNVIFQVAGGTGNGVIKEAR---DRRLNGQDVWVIGVDRDQYMDGVY---DGSKS-VVLTSMVKRADVAAERISKMAYDGSFPGGQSIMFGL--EDKAVGI-PEENPN--LSSAVM---EKIRSFEEKIVSKEIVV---PVR----------------------------------
33 Fugue 72.7322% -51 - C3 -3S99 PBP_BRUA2 A:[26-355] --------------------------------KLKVGFI-YIGPPGDFGWTYQHDQARKELVEALG--DKVETTFLEN--V-AEGADAERSIKRIARAGNKLIF---TTSFGYM-D-P---TVKVAKKFPDVKFEHATGY----KT-------ADNMSAYNARFYEGRYVQGVIAAKMS----K---K---GIAGYIGSVPV-P-EVVQGINSFMLGAQSVNPDF-RVKVI-WV-----NSW-FDPGKEADAAKALID--QGVDIITQHTDST--AAIQVAHDRG--------IKAFGQASDMIKFAP---------DTQLTAVVDEWGPYYIDRAKAVLDGTWKSQ-NIWWGM--KEGLVKMAPFT--N--MPDDVK---KLAEETEARIKSGELNPFTGPIKKQDGSEWLKAGEKADDQTLLGMNFYVAGVDDKLP
12 HHSearch 68.5420% -52 - C3 -3S99 PBP_BRUA2 A:[26-317] --------------------------------KLKVGFIY-IGPPGDFGWTYQHDQARKELVEALGDK--VETTFLEN--VAEG-ADAERSIKRIARAGNKLIF---TTSFGYM-D-P---TVKVAKKFPDVKFEHATGYK---T--------ADNMSAYNARFYEGRYVQGVIAAKMS----K---K---GIAGYIGSVPV-P-EVVQGINSFMLGAQSVNPDF-RVKVI-WV-----NSW-FDPGKEADAAKALID--QGVDIITQHTDS--TAAIQVAHDRG--------IKAFGQASDMIKF---------APDTQLTAVVDEWGPYYIDRAKAVLDGTWKSQ-NIWWGM--KEGLVKM-APF--TN-MPDDVK---KLAEETEARIKSGELNP---FTG----------------------------------
26 HHSearch 59.7117% -69 - C3 -1GUD ALSB_ECOLI A:[2-263] ---------------------------------AEYAVVL-K-TL-SNPFWVDMKKGIEDEAKTLGVS----VDIFASPSEGDF-QSQLQLFEDLSNKNYKGIA---FAPLSSV-N-LVMPVARA--WKKGIYLVNLDEKI---DMDNLKKAGGNVEAFVTTDNVAVGAKGASFIIDKL----G---AEG-GEVAIIEGKAGNA-SGEARRNGATEAFKKA-SQI-KLVAS-QP-----ADW-D-RIKALDVATNVLQRNPNIKAIYCANDTMAMGVAQAVANAGK----TGKVLVVGTDGIPEARKMV------EAGQMTATVAQNPADIGATGLKLMVDAEKSGKVIPLDKA--PEFKLVD-SIL--V--TQ----------------------------------------------------------------
15 HHSearch 59.6214% -56 - C3 -2O20 ? A:[62-308] -------------------------------RTTTVGVIL-P-TI-TSTYFAAITRGVDDIASMYKYN----MILANS--DNDV-EKEEKVLETFLSKQVDGIV---YMGSSLD-EKI---RTSL--KNSRTPVVLVGTID---G--------DKEIPSVNIDYHLAAYQSTKKLIDSG--------N---KKIAYIMGSLKDV-ENTERMVGYQEALLEANIEF-DENLV-FE-----GNY--SYEQGKALAERLLE--RGATSAVVSHDTVAVGLLSAMMDKGVK--VPEDFEIISGANSPITQY---------TYPTLTSVNQPLYDLGAVAMRLLTKLMLKEDVEQNQLV--LDHEIFS-RRS--T--K-----------------------------------------------------------------
23 HHSearch 58.7817% -56 - C3 -3CLK ? A:[8-254] --------------------------------SNVIAAVV-S-S-VRTNFAQQILDGIQEEAHKNGYN----LIIVY------------HALLTAIERPVMGIL---LLSIA-----N---LQLL--QSS--PYCFLSMG--------------DDRPFISSDDEDIGYQATNLLINEG--------H---RQIGIAGIDQYPY-TGRKRLAGYKKALKEANIAI-NQEWI-KP-----GDY-S-YTSGEQAMKAFGKN-TDLTGIIAASDMTAIGILNQASSFGIE--VPKDLSIVSIDGTEMCKI---------TRPQLTSISQDFFQMGVTGVQQIHQSVKIVSQQFIPVN--PVIRKST-ARL-----------------------------------------------------------------------
28 HHSearch 58.2917% -45 * C3 *2QU7 ? A:[7-255] -------------------------------RSNIIAFIV-PD---QNPFFTEVLTEISHECQKHHLH----VAVASS--EENE-DKQQDLIETFVSQNVSAII---LVPVKSK-F-----QMKR--EWLKIPIMTLDREL---E--------STSLPSITVDNEEAAYIATKRVLEST--------C---KEVGLLLANPNIS-TTIGRKNGYNKAISEFDLNV-NPSLIHYSDQQLGTNA--QIYSGYEATKTLLS--KGIKGIVATNHLLLLGALQAIKESEKE--IKKDVIIVGFDDSYWNEI---------YTPKLTVISQPVKEMGQVAAKMIYKLIKGKDVTSIKLS--TKLIIRE-SCS--F--N-----------------------------------------------------------------
5 PsiBlast_PDB 55.7130% -77 - C3 -3S99 PBP_BRUA2 A:[73-221] -------------------------------------------------------------------------------------ADAERSIKRIARAGNKLIF---TTSFGYM-D-P---TVKVAKKFPDVKFEHATGY----KT-------ADNMSAYNARFYEGRYVQGVIAAKMS----K---K---GIAGYIGSVPV-P-EVVQGINSFMLGAQSVNPDF-RVKVI-WV-----NSW-FDPGKEADAAKALID--QGVDIITQHTDSTAAIQVAHDRGIKAFGQASDMIKFAPDTQLTAVVDEWGPYYIDRAKAVLDGTWKSQNIWWGMKEGLVKMAPFTNMPDDVKKL--AEETEAR-IKS--G--ELNPFT---GPIKKQDGSEWLKAGEK---ADD----------------------------------
22 HHSearch 55.6914% -62 - C3 -3BIL - ? A:[67-308] ----------------------------------TIGVIV-P-SL-INHYFAAMVTEIQSTASKAGLA----TIITNS--NEDA-TTMSGSLEFLTSHGVDGII---CVPNEEC-ANQ---LEDL--QKQ-MPVVLVDREL---PG-------D-TIPTATSNPQPGIAAAVELLAHNN--------A---LPIGYLSGPMDTS-TGRERLEDFKAACANSKIGE-QL--V-FL-----GGY-E-QSVGFEGATKLLD--QGAKTLFAGDSMMTIGVIEACHKAGLV--IGKDVSVIGFDTHPLFAL---------QPHPLTVIDQNVEQLAQRAVSILTELTTIPTALIHRES--IINS------------------------------------------------------------------------------
14 HHSearch 55.5713% -51 - C3 -1QPZ PURR_ECOLI A:[56-306] ------------------------------NHTKSIGLLA-T-SS-EAAYFAEIIEAVEKNCFQKGYT----LILGNA--WNNL-EKQRAYLSMMAQKRVDGLL---VMCSEYP-E-PL--LAMLE-EYRHIPMVVMDWGE---AK-------ADFTDAVIDNAFEGGYMAGRYLIERG--------H---REIGVIPGPLERN-TGAGRLAGFMKAMEEAMIKV-PESWI-VQ-----GDF--EPESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLR--VPQDVSLIGYDNVRNARY---------FTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIE--VHPRLIE-RRS--V--ADGPFR---DYR------------------------------------------------------
19 HHSearch 54.9113% -50 - C3 -1DBQ PURR_ECOLI A:[8-255] ---------------------------------KSIGLLA-TS--SEAAYFAEIIEAVEKNCFQKGYT----LILGNA--WNNL-EKQRAYLSMMAQKRVDGLL---VMCSEYP-E-PL--LAMLE-EYRHIPMVVMDWGE---AK-------ADFTDAVIDNAFEGGYMAGRYLIERG--------H---REIGVIPGP-------AGRLAGFMKAMEEAMIKV-PESWI-VQ-----GDF-E-PESGYRAMQQILSQPHRPTAVFCGGDIMAMGALCAADEMGLR--VPQDVSLIGYDNVRNARY---------FTPALTTIHQPKDSLGETAFNMLLDRIVNKREEPQSIE--VHPRLIE-RRS--V--ADGPFR---DYRR-----------------------------------------------------
25 HHSearch 54.5313% -51 - C3 -3DBI ASCG_ECOLI A:[60-310] -------------------------------STQTLGLVV-TNTLYHGIYFSELLFHAARMAEEKGRQ----LLLADG--KHSA-EEERQAIQYLLDLRCDAIM---IYPRFLSVD-E---IDDII-DAHSQPIMVLNRRL---R--------KNSSHSVWCDHKQTSFNAVAELINAG--------H---QEIAFLTGSMDSP-TSIERLAGYKDALAQHGIAL-NEKLI-AN-----GKW-T-PASGAEGVEMLLERGAKFSALVASNDDMAIGAMKALHERGVA--VPEQVSVIGFDDIAIAPY---------TVPALSSVKIPVTEMIQEIIGRLIFMLDGGDFSPPKTF--SGKLIRR-DSL--I--APS---------------------------------------------------------------
17 HHSearch 54.1115% -49 - C3 -2FEP CCPA_BACSU A:[16-264] --------------------------------TTTVGVII-P-D-ISSIFYSELARGIEDIATMYKYN----IILSNS--DQNM-EKELHLLNTMLGKQVDGIV---FMGGNIT-DEH---VAEF--KRSPVPIVLAASVE---E--------QEETPSVAIDYEQAIYDAVKLLVDKG--------H---TDIAFVSGPMAEPINRSKKLQGYKRALEEANLPF-NEQFV-AE-----GDY-T-YDSGLEALQHLMSLDKKPTAILSATDEMALGIIHAAQDQGLS--IPEDLDIIGFDNTRLSLM---------VRPQLSTVVQPTYDIGAVAMRLLTKLMNKEPVEEHIVE--LPHRIEL-RKS--T--K-----------------------------------------------------------------
7 PsiBlast_PDB 53.6225% -83 - C3 -4P98 ? A:[72-215] -----------------------------------------------------------------------------------------------AARGFDLVV---GHGIDVS-E-P---ILRVATEFPDVHFSASGDATLAERL-------PPNVDGWTYDFGQLGYLDGFVAGSLR----G---V---EKVGAVGGPQL-P-FVLATHKGIRAGLKAANPRA-SYEET-YT-----GRF-YDLQKEQEAARGLLD--KGAQLLVATDDGRGLGQAAVAGDVPTIGVSAAAGADIKAVNITTALDLLPTYQSYLEQIRAGTFGRRFDVLALGNRGIVLTPITAVGDVVPDDL--QARVDAL-SER--L--ASGELR---LPNFFE---------------------------------------------------
24 HHSearch 52.5911% -63 - C3 -3H5O ? A:[63-307] ---------------------------------RTVLVLI-P-SL-ANTVFLETLTGIETVLDAAGYQ----MLIGNS--HYDA-GQELQLLRAYLQHRPDGVL---ITGLSHA-E-PF--ERIL--SQHALPVVYMMDLA------------DDGRCCVGFSQEDAGAAITRHLLSRG--------K---RRIGFLGAQLD-E-RVMKRLDGYRAALDAADCRDAGLEWL-DP-----QPS--SMQMGADMLDRALAERPDCDALFCCNDDLAIGALARSQQLGIA--VPERLAIAGFNDLQPAAW---------CTPPLTTVATPRRDIGVHAAKALLQLIDGEEPASRRAD--LGFRLML-RRS--S--EG----------------------------------------------------------------
34 Fugue 52.3813% -29 - C3 -1TJY LSRB_SALTY A:[1-316] GSAERIAFIPKLVGVGFFTSGGNGAQEAGKALGIDVTYDGPT-----------------------------------E--P-SV-SGQVQLVNNFVNQGYDAIIVSAVSPDGLC-P-A---LKRAMQRG--VKILTWDSDT---KP-------ECRSYYINQGTPKQLGSMLVEMAAHQVDKEK---A---KVAFFYSSPTV-T-DQNQWVKEAKAKISQEHPGW-EIVTT-QF-----GYNDATKSLQTAEGIIKAY--PDLDAIIAPDANALPAAAQAAENLK-----RNNLAIVGFS--TPNVMRPYVQRGTVKEFGLWDVVQQGKISVYVANALLKNMPMNVGDSLDIPGIGKVTVSPN-SEQ--G--YHYEAKGNGIVLLPERVIFNKDNIDK---YDF----------------------------------