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(Nov 2016)

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3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0563: (2015-12-01 )
MDIKAEIQKLAKEIGISKIGFTTADNFDYLEKSLRASVEEGRNSGFEHKVIEDRIYPERLLESAKTIISIGVAYPHKLPQQPQKTSYKRGKITPNSWGLDYHYVVGEKLDRLSKGIEELCRDFPLQQKAMVDTGALVDTAVAQRAGIGFIGKNGLVISKEYGSYMFLGELITNLEIEPDKPVDYDCGDCRRCLDACPTSCLIGDGSMNAKRCLSFQTQDKGMMDIEFRKKIKTVIYGCDICQICCPYNKGINNPLATEIDPELAQPELIPFLSLSNGQFKEKFGMIAGSWRGKNILQRNAIIALANAHDKTAVVKLIEIIDKNNNPIHTATAIWALGEIVKKPNDEILEFMSNLTLKDEDSRKELELIRHKWQF

Atome Classification :

(20 SA) ----------------------------------------------------------------------------.........10........20........30.....---------------...40-----.........-------50.......---.60........--70........--80-----........90....--....100----.-----------......110.......120.......130.......140.----......150.-----..---..--.--.160.......170.......180...----....--190---.--........200.--------..-----------.------..---------..210----------.....-...220------.....---...230...--------.--.---..------240.......250-.......------.260-....---------....270.--..-.-----------------...-----------------280.....------..290.......300.-......310..----....-----------------.-320-....-----.------------------------..330.----...---------------...340...-----..--------.-.350.....----------.-.360.........--370..---------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------------------------------------------------------MDIKAEIQKLAKEIGISKIGFTTADNFDYLEKSLRA---------------SVEE------GRNSGFEHK-------VIEDRIYPE---RLLESAKTIIS--IGVAYPHKLP--QQ-----PQKTSYKRGKITPN--SWGLDYH----Y-----------VVGEKLDRLSKGIEELCRDFPLQQKAMVDTGALVDTAVAQ----RAGIGFIGKN-----GL---VI--S--KEYGSYMFLGELITNLEIEPDKPVDYD----CGDC--R-----R--CLDACPTSCL-I--------GD-----------G------SM---------NAKR-----------CLSFQ-TQDKG-------MMDIE---FRKKIKTVI--------Y--G---CD------ICQICCPYNKGI--NNPLATE------IDP--ELAQ---------PELIPFLS--LS-N-----------------GQF-----------------KEKFGMIA------GSWRGKNILQRNAIIA-LANAHDKTAVV----KLIE-----------------I-IDK-NNNP-----I------------------------HTATAI----WAL---------------GEIVKKPND-----EI--------L-EFMSNLTLK----------D-ED--SRKELELIR--HKWQF---------------------------------------------
5 PsiBlast_PDB 63.7926% -64 - C5 -4UR3 ? A:[273-395] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVGQSVAFAV----EAGLGQASRM-----GA---CI--T--PEFGPNVRLTKVFTNMPLVPDKPIDFGVTEFCETC--K-----K--CARECPSKAI-T--------EG-----------P------RT---------FEGR-----------SIHNQ-S-GKL-------QWQND---YNKCLGYWP--------E--SGGYCG------VCVAVCPFTKGN--IWIHDGV------EWL--IDNT---------RFLDPLML--GM-D-----------------DAL-----------------GYGAKRNI------TEVWDGKINTYGLDAD-HFRDTVSFRKD----RVK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 63.4626% -61 - C5 -4UR2 ? A:[273-395] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVGQSVAFAV----EAGLGQASRM-----GA---CI--T--PEFGPNVRLTKVFTNMPLVPDKPIDFGVTEFCETC--K-----K--CARECPSKAI-T--------EG-----------P------RT---------FEGR-----------SIHNQ-S-GKL-------QWQND---YNKCLGYWP--------E--SGGYCG------VCVAVCPFTKGN--IWIHDGV------EWL--IDNT---------RFLNITEV--WD-G-----------------KIN-----------------TYGLDADH------FRDTVSFRKDRVK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 63.0126% -65 - C5 -4UR1 ? A:[273-395] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVGQSVAFAV----EAGLGQASRM-----GA---CI--T--PEFGPNVRLTKVFTNMPLVPDKPIDFGVTEFCETC--K-----K--CARECPSKAI-T--------EG-----------P------RT---------FEGR-----------SIHNQ-S-GKL-------QWQND---YNKCLGYWP--------E--SGGYCG------VCVAVCPFTKGN--IWIHDGV------EWL--IDNT---------RFLDPLMN--IT-E-----------------VWD-----------------GKINTYGL------DADHFRDTVSFRKDRV-K-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 62.9626% -63 - C5 -4UQU ? A:[273-395] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVGQSVAFAV----EAGLGQASRM-----GA---CI--T--PEFGPNVRLTKVFTNMPLVPDKPIDFGVTEFCETC--K-----K--CARECPSKAI-T--------EG-----------P------RT---------FEGR-----------SIHNQ-S-GKL-------QWQND---YNKCLGYWP--------E--SGGYCG------VCVAVCPFTKGN--IWIHDGV------EWL--IDNT---------RNITEVWD--GK-I-----------------NTY-----------------GLDADHFR------DTVSFRKDRVK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 62.0926% -63 - C5 -4UR0 ? A:[273-395] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVGQSVAFAV----EAGLGQASRM-----GA---CI--T--PEFGPNVRLTKVFTNMPLVPDKPIDFGVTEFCETC--K-----K--CARECPSKAI-T--------EG-----------P------RT---------FEGR-----------SIHNQ-S-GKL-------QWQND---YNKCLGYWP--------E--SGGYCG------VCVAVCPFTKGN--IWIHDGV------EWL--IDNT---------RFLDPLMN--IT-E-----------------VWD-----------------GKINTYGL------DADHFRDTVSFRKDRV-K-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49 Fugue 60.5514% -21 - C1 -4Q0C - BVGS_BORPE A:[66-578] SQELTLVGKAAVPDVEVALDGDDWRWLARKRVLTLGVYAPDIPPFDVTYGERYEGLTADYMAIIAHNLGMQAKVLRYPTREQALSALESGQIDLIG--TVNGTDGRQQSLRL---------------SVPY------AADHPVIVM-------PIGARHVPA---SNLAGQRLAVD--INYLPKETLA--RA-----YPQATLHYFPSSEQ--ALAAVAYGQADV-----------FIGDALTTSHLVSQSYFNDVRVVAPAHIATGGESFGVRAD----NTRLLRVVNA-----VL---EAIPP--SEHRSLIYRWGLGSSISLDFAHP-AYS----AREQ--Q-----W--MADHPVVKVA-V--------LN-----------L------FA---------P--------------FTLFR-TDEQFGGISAAVLQLLQ---LRTGLDFEI--------I--G---VD------TVEELIAKLRSG--EADMAGA------LFV--NSAR---------ESFLSFSRPYVR-N-----------------GMVIVTRQDPDAPVDADHLDGRTVALVR------NSAAIPLLQRRYPQAK-VVTADNPSEAM----LMVANGQADAVVQTQISASYYV-NRY-FAGK-----L------------------------RIASALDLPPAEI---------------ALATTRGQT-----EL--------M-SILNKALYS----------I-----SNDELASII--SRWRGSDGDPRTWYAYRNEIYLE---------------------------
52 Fugue 59.4112% -10 - C4 -4IFD RRP43_YEAST C:[6-393] ----------------------------------------------------------------------------LE-----TIEIHPITFPPEVLARISPELSLQRHLSLGIRPCLRKYEEFRDVAIEN------NTLSRYADA-------GNIDTKNNILGSNVLKSGKTIVI--TSITGGIIEETEDI-----IANYASVYPVVEVE--RGRVGAC------------------TDEEMTISQKLHDSILH----------SRILPKKALKV----KAGVRSANED-----GT---FS--VLYPDELKRKWSYVLYAKIVVLSRT---------------G-----P--VFDLCWNSLM-Y--------AL-----------Q------SV---------KLPR-----------AFIDE-RASDL-------RMTIR---TRGRSATI--------------------------------------RETYEII------CDQ--TKSV---------P---LMIN--AK-N-----------------IAF-----------------ASNYGIVE------LDPECQL-QNTVLIAD-LDTEAEETSIH----STIS-----------------I-LAA-PSGN--------------------------------YKQL----TLM---------------GGGAKITPE-----MI--------K-RSLLLSRVR----------A-DD--LSTRFNI------------------------------------------------------
48 Fugue 57.8717% -18 - C2 -2Q06 - ? A:[22-496] ----------------------------------------------------------------ATEIRASVGRMVGGIGRFYIQMCTELKLSDQEGRLIQNSITIERMVLS---------------AFDE------RRNRYKDPK-------KTGGPIYRR---RDGKWVRELIL--YDKEEIRRIW--RQ-----ANNGE-------DA--TAGLTHM----M-----------IWHSNLNDATYQ----------RTRALVRTG-MDPRMCSL----MQGSTLPRRS-----GA---AG--A--AIKGVGTMVMELIRMIKRGINDRNFWR----GENG--R-----R--TRIAYERMCN-I--------LK-----------GKFQ---TA---------AQKA-----------MMDQV-RESRN-------PGNAE---IEDLIFLARSALILRGSI--A---HK------SCLPACVYGLAVASGYDFEREGYSLVGIDPFRLLQN---------SQVFSLIR--PNEN-----------------PAH-----------------KSQLVWMACHSAAFEDLRVSSFIRGTRVIP-RGQLSTRGVQI----ASNE-----------------N-VEAMDSST-----L------------------------ELRSRY----WAIRTRSGGNTNQQRASAGQISVQPTF-----SVQRNLPFERA-TIMAAFKGN----------T-EGRTSDMRTEIIR--MMESARPEDVSFQGRGVFELSDEKATNPIVPSFDMSNEGSYFFGDNAEEY
50 Fugue 57.3616% -31 - C6 -4XD1 ? A:[21-417] ----------------------------------------------------------------MKLIIAGKNNIAVDVTKWIIKTISDIELYSVCNENDHGNDSFQLSFKK---------------FCIQFNIPIISLEDAYHLEDAIFLSLEFDKIIHPS---KF--THNRIFN--IHFSYLPAYK--GMYTSAWPILNNEQESGVTLHKIDHGIDTG----A-----------IIDQQKFPLD--IEETAKTLYLKYIKIGTEIVIKNLPALI----SGNYSIVEQS-----AIKSSYY--S--KKSIDY-------KNLMIDLNKTAHEI----LQQI--R-----A--FTFRDYQLPR-I--------DD-----------I------DI---------FHGE-----------ILSSK-SLSKP-------GTILEKNNYHLILSTID--------Y--D---IK------LYS-------DN--FDEILTA------CED--K--S---------PEFISKLL--KT-E-----------------NIL-----------------FEK-----------------NHLGASPIII-AAYHGNMDVIE----WLVS-----------------KGVNI-NDRN-----Y------------------------KGTTVA----MYF---------------KDYMLRSGNYTGLENL--------I-NLGLDLFLK----------D-NE--GLSVFDYMRKNKNIELFNFMSTFN-------------------------------------
44 Fugue 57.3516% -22 - C3 -4UQU ? A:[1-462] ----------------------------------------------------------------------------AEKEKNAAEIRQQFAMTAGSPIIVN--DKLERYAEV---------------RTAF------THPTSFFKP-------NYKGEVKP-----WFLSAYDEKV--RQIENGENGP--KMKAK--NVGEARAGRALEAA--GWTLDIN----YGNIYPNRFFMLWSGETMTNTQLWAPVGLDRRPPDTTDPVELTNYVKFAARMAGADLVGVARLNRNWVYSEAV---TI--P--ADVPYEQSLHKEIEKPIVFKDVPLPIE----TDDE--L-----I--IPNTCENVIV-A--------GI-----------A-------M---------NREMMQTAPNSMACATTAFC-YSRMC-------MFDMW---LCQFIRYMG--------Y-----------------YAIPSCNGV--GQSVAFA------VEA--GLGQASRMGACITPEFGPNVR--LT-KVFTNMPLVPDKPIDFGVTEF-----------------CETCKKCA------RECPSKAITEGPRTFE-GRSIHNQSGKLQWQNDYNK-----------------C-LGY-WPESGGYCGV------------------------CVAVCP----FTK---------------GNIWIHDGV-----EW--------LIDNTRNITEVWDGKINTYGLD-AD--HFRDTVSFR--KDRVK---------------------------------------------
47 Fugue 53.1013% -35 * C6 *4WZI PDE4B_HUMAN A:[85-576] ------------------------------------------------------------------------VTPFAQVLASLRSVRNNFTIQKLAMETLEELDWALDQLET---------------IQTY------RSVSEMASN-------KFKRMLNRE---LTHLSEMSRCGNQVSEYISNTFL--DK-----ENEDHLAKELEDLN--KWGLNIF----N-----------VAGYSHNR---PLTAIMYAIFQERDLLKTFRISSDTFITY----MMTLEDHYHS-----DV-----------AYHNSLHAADVAQSTHVLLSTPALDA----VFTD--L-----E--ILAAIFAAAI-HDVDHPGVSNQ-----------F------LI---------NTNS-----------ELALM-YNDES-------VLENH---HLAVGFKLL--------QEEH---AD------IFMNLTKKQRQT--LRKMVID------MVL--ATDM---------SKHMSLLA--DL-K-----------------TMV-----------------ETKKVTSS------GVLLLDNYTDRIQVLRNMVHAADLSNPT----KSLE-----------------L-YRQ-WTDR-----IMEEFFQQGDKERERGMEISPMADKHTACVE----KSQ---------------VGFIDYIVH-----PL--------W-ETWADLVQP----------DAQD--ILDTLEDNR--NWYQAMIP------------------------------------------
6 PsiBlast_PDB 47.7825% -59 - C5 -4RAS ? A:[492-572] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FTTDLPMSVDRPIDFGLQDFCNQC--R-----K--CARECPCNAISF--------GD-----------K------VMFNGYEIWKADVEK-----------CTKYRVTQMKG--------------------------------S--A---CG------RCMKMCPWNRED--TVEGRRL------AEL--SIKV---------PEARAAII--AM-D-----------------DAL-----------------QNGKRNLI------KRWWFDLEVIDGVAGA-PRMGTNERDLS----PDRG-----------------D-KIG-ANQK-----L------------------------AMYPPR----LQP---------------PPGTTLDAV-----LP--------V-DRSGGLAEY----------A-AA--ETPAAARAR--LKSSA---------------------------------------------
21 HHSearch 47.5727% -56 - C5 -2ZVS YFHL_ECOLI A:[6-58] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KK----CINC--D-----M--CEPECPNEAI-S--------MGDHI--------Y------EI---------NSDK-----------CT--------------------------------------------E---CVGHYETPTCQKVCPIPNTI--VKDPAHV------ETE--EQLW---------DKFVLMHH--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 HHSearch 44.8725% -36 - C5 -1H98 FER_THET8 A:[6-54] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EP----CIGVKDQ-----S--CVEVCPVECI-Y--------DGGDQ--------F------YI---------HPEE-----------CI--------------------------------------------D---CG------ACVPACPVNAIY--PEEDVPE------QWK--SYIE---------KNRKLAGL--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 HHSearch 44.4128% -77 - C5 -3OR1 ? B:[223-273] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EI--P-----L--AVAACPTAAV-K--------PITAEVNGQKVKSV------AI---------NNDR-----------CM--------------------------------------------Y---CG------NCYTMCPALPLS--DGTGDGI------AIM--VGGK---------ISNRIKVP--SF-S-----------------KVV-----------------VAFVPNEP------PRWPTMAKIVKKIVEV-YAEDARKYERI----GDWI-----------------H-RIG-WETF-----Y------------------------EKTGLE----FSH---------------HCIDDFRDP-----AY--------Y-TWRQSTQFK----------F-VS--FDS----------------------------------------------------------
30 HHSearch 43.2327% -41 - C5 -2FGO ? A:[6-58] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DD----CINC--D-----V--CEPECPNGAI-S--------QGEEI--------Y------VI---------DPNL-----------CT--------------------------------------------E---CVGHYDEPQCQQVCPVDCIP--LDDANVE------SKD--QLME---------KYRKITGK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 HHSearch 42.8624% -62 - C5 -1JB0 PSAC_THEEB C:[8-62] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DT----CIGC--T-----Q--CVRACPTDVL-E--------MV-----------P-------W---------DGCK-----------AG-QI-AS----------SPR----------TEDC--------V--G---CK------RCETACPTDFLS--IRVYLGA------ETT--RSMG---------LAY-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35 HHSearch 41.4028% -62 * C5 *3MM5 DSRB_ARCFU B:[206-255] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AI----RKTC--E-----IPSTVAACPTGAL-K--------PDMKNKT------I------KV---------DVEK-----------CM--------------------------------------------Y---CG------NCYTMCPGMPLF--DPENDGA------AIM--VGGK---------LSEARRMP--EL-S-----------------KVV-----------------VPWVPNEP------PRWPTLVKYVKQILEA-WAANANKHERL----IEWV-----------------D-RIG-WERF-----F------------------------ELTGLE----FTQ---------------HLIDDYRIT-----PY--------F-YSEFRASTQ----------F-KW---------------------------------------------------------------
33 HHSearch 40.4527% -67 - C5 -3GYX ? B:[7-62] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SK----CDGC--KGGEKTA--CMYICPNDLM-I--------LD-----------PEEMKAFNQ---------EPEA-----------CW--------------------------------------------E---CY------SCIKICPQGAIT--ARPYADF------APM--GGTC---------IPLRGSED--IM-W-----------------TIK-----------------FRNGSVKR------FKFPIRTTPEGSIKPF-EGKPEAGDLEN----ELLF-----------------T-ETA-LTVP-----Q------------------------VALGQK----AQI---------------ADAETSQCW-----FD--------L-PCEGGNR-------------------------------------------------------------------------------
23 HHSearch 40.4025% -40 - C5 -1RGV ? A:[6-58] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DD----CTAC--D-----A--CVEECPNEAI-T--------PG-----------DPIY---VI---------DPTK-----------CS--------------------------------------------E---CVGAFDEPQCRLVCPADCIP--DNPDYRE------TRE--ELQE---------KYDRLHG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------