@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0887: (2015-12-04 )
MSQITFKKVGLDNVNILQNLAIETFRQTFSHDNSEEQLQAFFNESYTLPVLKSEITHAESDTYFVYLDTDLVGYLKVNWGSQQTEKDLDKAFEIQRIYLLDAYQGKGIGKATFEFALDLAYKSGLDWAWLGVWEFNHKAQAFYAKYGFEKFSEHQFSVGDKVDTDWLLRKSLH

Atome Classification :

(20 SA) -----------------------------------------------------------------------------------------------------------------------------------------------.........-10........20.......-.30--------.------.---......40--------........50.....-..--.60......--------..70........80...------------------------.....90........100.......110.......120.-.-.-...-.130.......140.......150.....--.---.160.......170.----
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -----------------------------------------------------------------------------------------------------------------------------------------------MSQITFKKV-GLDNVNILQNLAIETFRQT-FSH--------D------N---SEEQLQAF--------FNESYTLPVLKSEIT-HA--ESDTYFVYL--------DTDLVGYLKVNWGSQQT------------------------EKDLDKAFEIQRIYLLDAYQGKGIGKATFEFALDLAYKS-G-L-DWA-WLGVWEFNHKAQAFYAKYGFEKFSEHQFS--V---GDKVDTDWLLRKSLH----
1 PsiBlast_PDB 92.8862%-114 - C2 -4E2A - ? A:[37-206] -------------------------------------------------------------------------------------------------------------------------------------------------QVEIRKV-NQDELSLLQKIAIQTFRET-FAF--------D------N---TAEQLQNF--------FDEAYTLSVLKLELD-DK--ESETYFILM--------SGKAAGFLKVNWGSSQT------------------------EQVLEDAFEIQRLYILKAYQGLGLGKQLFEFALERAQIS-G-L-SWV-WLGVWEKNVKAQLLYAKYGFEQFSKHSFF--V---GNKVDTDWLLKKSL-----
2 PsiBlast_PDB 78.7236%-100 - C2 -1TIQ PAIA_BACSU A:[3-171] --------------------------------------------------------------------------------------------------------------------------------------------------VKMKKC-SREDLQTLQQLSIETFNDT-FKE--------Q------N---SPENMKAY--------LESAFNTEQLEKELS-NM--SSQFFFIYF--------DHEIAGYVKVNIDDAQS------------------------EEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALER-N-K-KNI-WLGVWEKNENAIAFYKKMGFVQTGAHSFY--M---GDEEQTDLIMAKTLI----
28 HHSearch 77.8535% -96 * C2 *1TIQ PAIA_BACSU A:[2-170] -------------------------------------------------------------------------------------------------------------------------------------------------SVKMKKC-SREDLQTLQQLSIETFNDT-FKE--------Q------N---SPENMKAY--------LESAFNTEQLEKELS-NM--SSQFFFIYF--------DHEIAGYVKVNIDDAQS------------------------EEMGAESLEIERIYIKNSFQKHGLGKHLLNKAIEIALER-N-K-KNI-WLGVWEKNENAIAFYKKMGFVQTGAHSFY--M---GDEEQTDLIMAKTLI----
4 PsiBlast_PDB 64.6726%-121 - C2 -3K9U PAIA_THEAC A:[3-144] --------------------------------------------------------------------------------------------------------------------------------------------------IEIRKL-SIEDLETLIEVARESWKWT-YAG--------I------Y---SEEYIESW--------IREKYSKEKLLNEIV-RS--QSNLDILFLGAFA----DSTLIGFIEL--------------------------------KIIANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKK-G-I-LEC-RLYVHRQNSVGFSFYYKNGFKVEDTDGSD--F---IMEKKY-------------
29 HHSearch 62.7917%-114 - C2 -3FNC ? A:[4-148] ------------------------------------------------------------------------------------------------------------------------------------------------MDFHIRKA-TNSDAEAIQHVATTSWHHT-YQD--------L------I---PSDVQDDF--------LKRFYNVETLHNRI---S--ATPFAVLEQ--------ADKVIGFANFIELE-------------------------------KGKSELAAFYLLPEVTQRGLGTELLEVGMTLFHV----P-LPM-FVNVEKGNETAIHFYKAKGFVQVEEFTED--F---YGYPLETIRFNLNH-----
32 HHSearch 62.2817%-103 - C2 -1GHE TTR_PSEAJ A:[4-173] --------------------------------------------------------------------------------------------------------------------------------------------------AQLRRV-TAESFAHYRHGLAQLLFET-VHGGASVGFMAD------L---DMQQAYAW--------CD------GLKADIA-AG--SLLLWVVAE--------DDNVLASAQLSLCQKPN---------------------------GLNRAEVQKLMVLPSARGRGLGRQLMDEVEQVAVKH-K-R-GLL-HLDTE-AGSVAEAFYSALAYTRVGELPGY--CATPDGRLHPTAIYFKTL-----
3 PsiBlast_PDB 61.6126%-108 - C2 -3F0A PAIA_THEAC A:[6-147] --------------------------------------------------------------------------------------------------------------------------------------------------IEIRKL-SIEDLETLIEVARESWKWT-YAG--------I------Y---SEEYIESW--------IREKYSKEKLLNEIV-RS--QSNLDILFLGAFA----DSTLIGFIEL--------------------------------KIIANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKK-G-I-LEC-RLYVHRQNSVGFSFYYKNGFKVEDTDGSD--F---IMEKKY-------------
43 HHSearch 61.0617%-116 - C2 -3I9S ? A:[23-169] -------------------------------------------------------------------------------------------------------------------------------------------------SVEIKRV-DKHHCLDLVGIFIELERYY-FGD--------KA-----A---SEQDLANY--------LSHQ-----VF--SE-HS--GVKVIAAVE--------HDKVLGFATYTIMFPAP------------------------K--LSGQMYMKDLFVSSSARGKGIGLQLMKHLATIAITH-N-C-QRL-DWTAESTNPTAGKFYKSIGASLIREKEYY--R---FEGNGLNKLAKSL------
5 PsiBlast_PDB 60.9426%-111 - C2 -3NE7 PAIA_THEAC A:[3-144] --------------------------------------------------------------------------------------------------------------------------------------------------IEIRKL-SIEDLETLIEVARESWKWT-YAG--------I------Y---SEEYIESW--------IREKYSKEKLLNEIV-RS--QSNLDILFLGAFA----DSTLIGFIEL--------------------------------KIIANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKK-G-I-LEC-RLYVHRQNSVGFSFYYKNGFKVEDTDGSD--F---IMEKKY-------------
6 PsiBlast_PDB 59.5826%-109 - C2 -3FIX PAIA_THEAC A:[27-168] --------------------------------------------------------------------------------------------------------------------------------------------------IEIRKL-SIEDLETLIEVARESWKWT-YAG--------I------Y---SEEYIESW--------IREKYSKEKLLNEIV-RS--QSNLDILFLGAFA----DSTLIGFIEL--------------------------------KIIANKAELLRLYLKPEYTHKKIGKTLLLEAEKIMKKK-G-I-LEC-RLYVHRQNSVGFSFYYKNGFKVEDTDGSD--F---IMEKKY-------------
31 HHSearch 59.3518% -83 - C2 -2CY2 ? A:[1-169] --------------------------------------------------------------------------------------------------------------------------------------------------VRIRRA-GLEDLPGVARVLVDTWRAT-YRG--------V------V---PEAFLEGL---------SYEGQAERWAQRLK-TPTWPGRLFVAESE-------SGEVVGFAAFGPDRASG------------------------F--PGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAE-G-Y-GRM-LVWVLKENPKGRGFYEHLGGVLLGEREIE--L---GGAKLWEVAYGFDLG----
44 HHSearch 59.3419% -97 - C2 -2AE6 ? A:[6-163] ------------------------------------------------------------------------------------------------------------------------------------------------TSLTIRLV-AEADWPALHALDQII------------------------------------------------SLAAYQEKMK-D---E-TIFVAIS--------GQQLAGFIEVHPPTSLA---------------------------AHQKQWLLSIGVSPDFQDQGIGGSLLSYIKDMAEIS-G-I-HKL-SLRVMATNQEAIRFYEKHGFVQEAHFKEEFYI---NGHYCDDYQYAYFI-----
46 HHSearch 58.9319% -92 - C2 -2I79 ? A:[3-171] ------------------------------------------------------------------------------------------------------------------------------------------------YELLIREA-EPKDAAELVAFLNRVSLETDFTS--------LDGDGILL---TSEEMEIF-----------------LNKQAS-SD--NQITLLAFL--------NGKIAGIVNITADQRKR---------------------------VRHIGDL-FIVIGKRYWNNGLGSLLLEEAIEWAQAS-GIL-RRL-QLTVQTRNQAAVHLYQKHGFVIEGSQERGAYIE--EGKFIDVYLMGKLI-----
49 Fugue 58.4118% -81 - C2 -2CY2 ? A:[1-174] --------------------------------------------------------------------------------------------------------------------------------------------------VRIRRA-GLEDLPGVARVLVDTWRAT-YRG--------V------V---PEAFLEGL---------SYEGQAERWAQRLK-TP--TWPGRLFVAESE-----SGEVVGFAAF--GPDRA------------------------SGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAE-G-Y-G-RMLVWVLKENPKGRGFYEHLGGVLLGEREIE--L---GGAKLWEVAYGFDLGGHKW
52 Fugue 57.6615%-100 - C2 -1P0H MSHD_MYCTU A:[6-313] ALDWRSALTADEQRSVRALVTATTAVDGVAPVGEQVLRELGQQRTEHLLVAGSRPGGPIIGYLNLSPPGGAMAELVVHPQSRRRGIGTAMARAALAKTAGRNQFWAHGTLDPARATASALGLVGVRELIQMRRPLRDIPEPTIPDGVVIRTYAGTSDDAELLRVNNAAFAGH-PEQ--------G------GW--TAVQLAER--------RGEAW-----------FD--PDGLILAFG--------DGRLLGFHWTK-----V------------------------HPDHPGLGEVYVLGVDPAAQRRGLGQMLTSIGIVSLARR-L-VEPAV-LLYVESDNVAAVRTYQSLGFTTYSVDTAY--A---L------------------
40 HHSearch 57.4819% -83 - C2 -2FIW ? A:[5-160] -----------------------------------------------------------------------------------------------------------------------------------------------MSTPALRPY-LPEDAAVTAAIFVASIEQL-TAD--------D------Y---SEEQQEAW--------ASAADDEAKFAARL---S--GQLTLIATL--------QGVPVGFASLKG-----------------------------------PDHIDMLYVHPDYVGRDVGTTLIDALEKLAGAR-G-A-LIL-TVDA---SDNAAEFFAKRGYVAKQRNTVS--I---NGEWLANTTMTKSL-----
34 HHSearch 57.3015% -99 - C2 -2B5G SAT1_HUMAN A:[2-151] ------------------------------------------------------------------------------------------------------------------------------------------------AKFVIRPA-TAADCSDILRLIKELAKYE-------------------Q---VILTEKDL-----------------LEDGFGEHP--FYHCLVAEVPKEHWTPEGHSIVGFAMYYFTYDPW---------------------------IGKLLYLEDFFVMSDYRGFGIGSEILKNLSQVAMRC-R-C-SSM-HFLVAEWNEPSINFYKRRGASDLSSEEGW--R---LFKIDKEYLLKMAT-----
41 HHSearch 56.9415%-100 - C2 -3DSB ? A:[5-149] ------------------------------------------------------------------------------------------------------------------------------------------------ELIEIREA-RMDDLDTIAKFNYNLAKET-EGK--------E------L---DMDVLTKG-----------------VKALLL-DER-KGKYHVYTV--------FDKVVAQIMYTYEWSDW------------------------R--NGNFLWIQSVYVDKEYRRKGIFNYLFNYIKNICDKDEN-I-VGM-RLYVEKENINAKATYESLNMYECDYNMYE--Y---EVIH---------------
8 PsiBlast_PDB 56.8320% -74 - C2 -2CY2 ? A:[1-157] --------------------------------------------------------------------------------------------------------------------------------------------------VRIRRA-GLEDLPGVARVLVDTWRAT-YRG--------V------V---PEAFLEGLSYEGQAERWAQRLKTPTWPGRLF-VA--ESES--------------GEVVGF--AAFGPDRA------------------------SGFPGYTAELWAIYVLPTWQRKGLGRALFHEGARLLQAE-G-Y-GRM-LVWVLKENPKGRGFYEHLGGVLLGEREIE--L---GGAKLWEVAYGFDLG----
36 HHSearch 56.4117% -72 - C2 -1U6M ? A:[2-189] --------------------------------------------------------------------------------------------------------------------------------------------------SLIRSA-TKEDGQAIARLVLVILKDM-ELP--------I------LEEVSEEQMIDL--------LAEATA----YPTYR-YG--YQRILVYEH--------AGEVAGIAVGYPAEDEKIIDEPLREVFKKHGLAEDVRLFIEEETLPNEWYLDTISVDERFRGMGIGSKLLDALPEVAKAS-G-K-QAL-GLNVDFDNPGARKLYASKGFKDVTTMTIS-------G--HLYNHMQKEVE----