@TOME V2.3
(Nov 2016)

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3D Common Core:

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs0899: (2015-12-04 )
MKYIVNTSNDPAYNVALEAYAFQKLTDIDEIFILWINEPAIIIGRHQNTIQEINKEFIDKNGIHVVRRLSGGGAVYHDLNNLNYTIISNNTQEGAFDFQTFSKPVIDTLAKLGVKAEFTGRNDLEINGQKFAGNAQAYYKGRMMHHGCLLFDVDMSVLGQALKVSKDKIESKGIKSVRARVTNIVDHLSDKITVQEFSDAILAQMKEEYPEMDEYVLSDAELSEIQAMRDNQFATWDWTYGKAPEYTIERGVRYPAGKITTYANVENSTIKSVKIFGDFFGVKPVDDIEKMLEGVRYDYKDVLAALKTVDTSQYFSRMTPEEITKAIVD

Atome Classification :

(20 SA) .........10........20.....--...30........40........50-........60........70........80.-.....-..90.--.......100.......110--......-.-120--------......----------..---.-130.......140.......150.......160.......170.......180.......190.......200......-.210.-.---...----...---220........230-........240.......250...--....260.......270.......-280..-.....290.......300.......310.......320.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MKYIVNTSNDPAYNVALEAYAFQKLT--DIDEIFILWINEPAIIIGRHQNTIQ-EINKEFIDKNGIHVVRRLSGGGAVYHDLNNL-NYTII-SNNTQ--EGAFDFQTFSKPVIDTLAKL--GVKAEF-T-G----------RNDLEI----------NG---Q-KFAGNAQAYYKGRMMHHGCLLFDVDMSVLGQALKVSKDKIESKGIKSVRARVTNIVDHLSDKITVQEFSDAILAQMKEE-YPE-M-D---EYV----LSD---AE-LSEIQAMRDN--QFATWDWTYGKAPEYTIERGVRYP--AGKITTYANVENSTIKSVKIFGDF-FGVKP-VDDIEKMLEGVRYDYKDVLAALKTVDTSQYFSRMTPEEITKAIVD
41 HHSearch 99.5264%-103 - C3 -1VQZ ? A:[13-340] MKYIINHSNDTAFNIALEEYAFKHLL--DEDQIFLLWINKPSIIVGRHQNTIE-EINRDYVRENGIEVVRRISGGGAVYHDLNNL-NYTII-SKEDE--NKAFDFKSFSTPVINTLAQL--GVKAEF-T-G----------RNDLEI----------DG---K-KFCGNAQAYINGRIMHHGCLLFDVDLSVLANALKVSKDKFESKGVKSVRARVTNIINELPKKITVEKFRDLLLEYMKKE-YPE-M-T---EYV----FSE---EE-LAEINRIKDT--KFGTWDWNYGKSPEFNVRRGIKFT--SGKVEVFANVTESKIQDIKIYGDF-FGIED-VAAVEDVLRGVKYEREDVLKALKTIDITRYFAGISREEIAEAVVG
1 PsiBlast_PDB 98.4362%-102 - C3 -1VQZ ? A:[14-340] -KYIINHSNDTAFNIALEEYAFKHLL--DEDQIFLLWINKPSIIVGRHQNTIE-EINRDYVRENGIEVVRRISGGGAVYHDLNNL-NYTII-SKEDE--NKAFDFKSFSTPVINTLAQL--GVKAEF-T-G----------RNDLEI----------DG---K-KFCGNAQAYINGRIMHHGCLLFDVDLSVLANALKVSKDKFESKGVKSVRARVTNIINELPKKITVEKFRDLLLEYMKKE-YPE-M-T---EYV----FSE---EE-LAEINRIKDT--KFGTWDWNYGKSPEFNVRRGIKFT--SGKVEVFANVTESKIQDIKIYGDF-FGIED-VAAVEDVLRGVKYEREDVLKALKTIDITRYFAGISREEIAEAVVG
42 HHSearch 77.2729% -87 * C3 *3A7R LPLA_ECOLI A:[3-334] LRLLISDSYDPWFNLAVEECIFRQMP--ATQRVLFLWRNADTVVIGRAQNPWK-ECNTRRMEEDNVRLARRSSGGGAVFHDLGNT-CFTFM-AGKPE-----YDKTISTSIVLNALNAL--GVSAEA-S-G----------RNDLVVKTVE------GD---R-KVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLP-GITHEQVCEAITEAFFAH-YGE-RVE---AEI----ISPNKTPD-LPNFAETFAR---QSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPAP-LEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSAWMAG
2 PsiBlast_PDB 75.7530% -86 - C3 -3A7A LPLA_ECOLI A:[3-302] LRLLISDSYDPWFNLAVEECIFRQMP--ATQRVLFLWRNADTVVIGRAQNPWK-ECNTRRMEEDNVRLARRSSGGGAVFHDLGNT-CFTFM-AGKPE-----YDKTISTSIVLNALNAL--GVSAEA-S-G----------RNDLVVKTVE------GD---R-KVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPG-ITHEQVCEAITEAFFAH-YGERV-E---AEI----ISP---NK-TPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPAP-LEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSAWMAG
3 PsiBlast_PDB 75.1330% -85 - C3 -3A7R LPLA_ECOLI A:[3-302] LRLLISDSYDPWFNLAVEECIFRQMP--ATQRVLFLWRNADTVVIGRAQNPWK-ECNTRRMEEDNVRLARRSSGGGAVFHDLGNT-CFTFM-AGKPE-----YDKTISTSIVLNALNAL--GVSAEA-S-G----------RNDLVVKTVE------GD---R-KVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPG-ITHEQVCEAITEAFFAH-YGERV-E---AEI----ISP---NK-TPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPAP-LEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSAWMAG
6 PsiBlast_PDB 74.1629% -83 - C3 -4TVW LPLA_ECOLI A:[7-306] LRLLISDSYDPWFNLAVAECIFRQMP--ATQRVLFLWRNADTVVIGRAQNPWK-ECNTRRMEEDNVRLARRSSGGGAVFHDLGNT-CFTFM-AGKPE-----YDKTISTSIVLNALNAL--GVSAEA-S-G----------RNDLVVKTVE------GD---R-KVSGSAYRETKDRGAHGGTLLLNADLSRLANYLNPDKKKLAAKGITSVRSRVTNLTELLPG-ITHEQVCEAITEAFFAH-YGERV-E---AEI----ISP---NK-TPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPAP-LEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSAWMAG
43 HHSearch 73.6624% -86 - C3 -2E5A LIPT_BOVIN A:[5-341] GLILQSISNDVYHNLAVEDWIHDHMNL-EGKPVLFLWRNSPTVVIGRHQNPWQ-ECNLNLMREEGVKLARRRSGGGTVYHDMGNI-NLTFF-TTKKK-----YDRMENLKLVVRALKAVHPHLDVQA-T-K----------RFDLLL----------DGQ--F-KISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLKSPYQGIRSNATASTPALVKNLMEKDP-TLTCEVVINAVATEYATS-HQI-D-NHIHLIN----PTD---ETVFPGINSKAIE---LQTWEWIYGKTPKFSVDTSFTVLHSHVEIKVFIDVKNGRIEVCNIEAPDHWLPLEICDQLNSSLIGSKFSPIETTV-------------DELHSKWNILCE
5 PsiBlast_PDB 72.4930% -83 - C3 -1X2H LPLA_ECOLI A:[3-302] LRLLISDSYDPWFNLAVEECIFRQMP--ATQRVLFLWRNADTVVIGRAQNPWK-ECNTRRMEEDNVRLARRSSGGGAVFHDLGNT-CFTFM-AGKPE-----YDKTISTSIVLNALNAL--GVSAEA-S-G----------RNDLVVKTVE------GD---R-KVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAK-------RVTNLTELLPG-ITHEQVCEAITEAFFAH-YGERV-E---AEI----ISP---NK-TPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPAP-LEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSAWMAG
44 HHSearch 70.1727% -91 - C3 -2C8M LPLAN_THEAC A:[4-256] RLLLLETPGNTRMSLAYDEAIYRSFQY-GDKPILRFYRHDRSVIIGYFQVAEE-EVDLDYMKKNGIMLARRYTGGGAVYHDLGDL-NFSVV-RSSDDM-DITSMFRTMNEAVVNSLRIL--GLDARP-G-ELNDVSIPVNKKTDIMA----------GE---K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK---------------ERVANVTDFV--DVSIDEVRNALIRGFSET-LHI-DFR---EDT----ITE---KE-ESLARELFDK--KYSTEEWNMGL-------------------------------------------------------------------------------------------
14 PsiBlast_PDB 64.5329% -94 - C3 -2ARS LPLAN_THEAC A:[35-255] --------------------------------ILRFYRHDRSVIIGYFQVAEE-EVDLDYMKKNGIMLARRYTGGGAVYHDLGDL-NFSVVRSSDDM--DITSMFRTMNEAVVNSLRIL--GLDARP-G-E----------LNDVSIPVNKKTDIMAGE---K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVL------------KSTRERVANVTDFVD--VSIDEVRNALIRGFSETLHID-F-R---EDT----ITE---KE-ESLARELFDK--KYSTEEWNMGLL------------------------------------------------------------------------------------------
13 PsiBlast_PDB 64.1829%-101 - C3 -2C8M LPLAN_THEAC A:[35-255] --------------------------------ILRFYRHDRSVIIGYFQVAEE-EVDLDYMKKNGIMLARRYTGGGAVYHDLGDL-NFSVVRSSDDM--DITSMFRTMNEAVVNSLRIL--GLDARP-G-E----------LNDVSIPVNKKTDIMAGE---K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK---------------ERVANVTDFVD--VSIDEVRNALIRGFSETLHID-F-R---EDT----ITE---KE-ESLARELFDK--KYSTEEWNMGL-------------------------------------------------------------------------------------------
7 PsiBlast_PDB 64.1528% -75 - C3 -2E5A LIPT_BOVIN A:[12-256] -------SNDVYHNLAVEDWIHDHMNL-EGKPVLFLWRNSPTVVIGRHQNPWQ-ECNLNLMREEGVKLARRRSGGGTVYHDMGNI-NLTFF----TT--KKKYDRMENLKLVVRALKAVHPHLDVQA-T-K----------RFDLLL----------DG---QFKISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLKSPYQGIRSNATASTPALVKNLMEK-DPTLTCEVVINAVATEYATS-H-Q-I-D---NHIHLINPTD---ET-VFPGINSKAI--ELQTWEWIYGKTPKFSVDTSFTVL--HSHVEIKVFIDVKNGRIEVCNIEA-PDHWL-PLEICDQLNSSLIGSKFSPIETTVDELHSKWNILCEKIKGIM---
8 PsiBlast_PDB 64.1328% -83 - C3 -3A7U - LIPT_BOVIN A:[12-256] -------SNDVYHNLAVEDWIHDHMNL-EGKPVLFLWRNSPTVVIGRHQNPWQ-ECNLNLMREEGVKLARRRSGGGTVYHDMGNI-NLTFF----TT--KKKYDRMENLKLVVRALKAVHPHLDVQA-T-K----------RFDLLL----------DG---QFKISGTASKIGRNAAYHHCTLLCGTDGTFLSSLLK------------------KNLMEK-DPTLTCEVVINAVATEYATS-H-Q-I-D---NHIHLINPTD---ET-VFPGINSKAI--ELQTWEWIYGKTPKFSVDTSFTVL--HEQSHVEIKVFIDVKNGRIEVCNI-EAPDH-WLPLEICDQLNSSLIGSKFSPIETTVLTSILHRTYPGDDELHSKW
11 PsiBlast_PDB 64.0229% -93 - C3 -2ARU LPLAN_THEAC A:[35-255] --------------------------------ILRFYRHDRSVIIGYFQVAEE-EVDLDYMKKNGIMLARRYTGGGAVYHDLGDL-NFSVVRSSDDM--DITSMFRTMNEAVVNSLRIL--GLDARP-G-E----------LNDVSIPVNKKTDIMAGE---K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVP----------STRERVANVTDFVD--VSIDEVRNALIRGFSETLHID-F-R---EDT----ITE---KE-ESLARELFDK--KYSTEEWNMGLL------------------------------------------------------------------------------------------
10 PsiBlast_PDB 63.4829% -97 - C3 -2ART LPLAN_THEAC A:[35-255] --------------------------------ILRFYRHDRSVIIGYFQVAEE-EVDLDYMKKNGIMLARRYTGGGAVYHDLGDL-NFSVVRSSDDM--DITSMFRTMNEAVVNSLRIL--GLDARP-G-E----------LNDVSIPVNKKTDIMAGE---K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVP----------STRERVANVTDFVD--VSIDEVRNALIRGFSETLHID-F-R---EDT----ITE---KE-ESLARELFDK--KYSTEEWNMGLL------------------------------------------------------------------------------------------
12 PsiBlast_PDB 63.1629%-101 - C3 -2C7I - LPLAN_THEAC A:[35-255] --------------------------------ILRFYRHDRSVIIGYFQVAEE-EVDLDYMKKNGIMLARRYTGGGAVYHDLGDL-NFSVVRSSDDM--DITSMFRTMNEAVVNSLRIL--GLDARP-G-E----------LNDVSIPVNKKTDIMAGE---K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLK--------------RERVANVTDFVD--VSIDEVRNALIRGFSETLHID-F-R---EDT----ITE---KE-ESLARELFDK--KYSTEEWNMGLLR-----------------------------------------------------------------------------------------
9 PsiBlast_PDB 62.2229% -90 - C3 -3R07 LPLAN_THEAC A:[58-278] --------------------------------ILRFYRHDRSVIIGYFQVAEE-EVDLDYMKKNGIMLARRYTGGGAVYHDLGDL-NFSVVRSSDDM--DITSMFRTMNEAVVNSLRIL--GLDARP-G-E----------LNDVSIPV--------GE---K-KIMGAAGAMRKGAKLWHAAMLVHTDLDMLSAVLKVPDEKFRDKIAKSTRERVANVTDFVD--VSIDEVRNALIRGFSETLHID-F-R---EDT----ITE---KE-ESLARELFDK--KYSTEEWNMGLLRKEVV-------------------------------------------------------------------------------------
4 PsiBlast_PDB 57.4630% -10 - C3 -1X2G - LPLA_ECOLI A:[3-302] LRLLISDSYDPWFNLAVEECIFRQMP--ATQRVLFLWRNADTVVIGRAQNPWK-ECNTRRMEEDNVRLARRSSGGGAVFHDLGNT-CFTFM-AGKPE-----YDKTISTSIVLNALNAL--GVSAEA-S-G----------RNDLVVKTVE------GD---R-KVSGSAYRETKDRGFHHGTLLLNADLSRLANYLNPDKKKLAAKG------RVTNLTELLPG-ITHEQVCEAITEAFFAH-YGERV-E---AEI----ISP---NK-TPDLPNFAETFARQSSWEWNFGQAPAFSHLLDERFT--WGGVELHFDVEKGHITRAQVFTDS-LNPAP-LEALAGRLQGCLYRADMLQQECEALLVDFPEQEKELRELSAWMAG
48 HHSearch 57.4119% -68 - C3 -1W66 LIPB_MYCTU A:[14-218] IDVRQLGTVDYRTAWQLQRELADARVA-GGADTLLLLEHPAVYTAGRRTETH--E-----RPIDGTPVVDTDRGGKITWHGPGQL-VGYPI-IGLAEPLDVVNYVRRLEESLIQVCADL--GLHAGRVD-G----------RSGVWL----------PGRPAR-KVAAIGVRVSRATTLHGFALNCDCDLAAFTAIV-PCG--IS-------DAAVTSLSAELGRTVTVDEVRATVAAAVCAA-LDG-VLP-------------------------------------------------------------------------------------------------------------------------------------
47 HHSearch 56.3916% -65 - C3 -2QHS LIPB_THET8 A:[23-228] FLVEDLGLVPYGEAWAYQKRVHREVVAGNRPPTLLLLEHPRVITLGRKATGENLLFPESWYRENGFELYWVERGGDVTYHGPGQLVGYPIF-PVGR---EVRRFLRQIEEAIVRVAAGY--GISAYP-TPG----------YAGVWV----------GE---D-KLCAIGVAVKEGVSFHGFALNVNTDLNDFTVIV-PC--GLK-------GKGVTSLEKLLGRKVPMEEAKARVVAAFAEV-FGL-R-P---V---------------------------------------------------------------------------------------------------------------------------------