@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1017: (2015-12-04 )
MAFESLTERLQGVFKNIRGKKKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKHVRERAVGHEIIDTLDPTQQIVKIVNEELTDLLGAETSEIEKSPKIPTIIMMVGLQGAGKTTFAGKLANKLIKEDNARPMMIAADIYRPAAIDQLKTLGSQINVPVFDMGTNHSAVEIVTKGLEQARENRNDYVLIDTAGRLQIDATLMQELHDVKAIAQPNEILLVVDSMIGQEAANVAEEFNRQLSISGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDLLTLIERASQEYDEKRSMELAEKMRENTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMANNPAMKNFKVDENEIARKRAIVSSMTPEERENPDLLNPSRRRRIAAGSGNTFVDVNKFIKDFNQAKQMMQGVMSGDMNKMMKKMGIDPNNLPKDMPGMDGMDMSNLEGMMGQNGMPDLSSLGGDMDFSQMFGGGLKGKVGAFAAKQSMKRMANKMKKAKKKRK

Atome Classification :

(46 SA) .........10........20----------.........30........40........50........60....-....70........80........90.-------.-..--....100.-----......110.......120.......130......-.140.......150.......160........170.......180.......190.......200.....---------..210.------.-----.------.....220.......230.......240........250.......260.......270.......280.......290.......300.......310.....-...320..-..-...330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MAFESLTERLQGVFKNIRGK-----------KKLSEKDVQEVTKEIRLALLEADVALPVVKTFIKHVRERAVGHEI-IDTLDPTQQIVKIVNEELTDLLGAETS-------E-IE--KSPKIPTI-----IMMVGLQGAGKTTFAGKLANKLIKEDNARPMMIAA-DIYRPAAIDQLKTLGSQINVPVF-DMGTNHSAVEIVTKGLEQARENRNDYVLIDTAGRLQIDATLMQELH---------DVK-AI------A-----Q------PNEILLVVDSMIGQEAANVAEEFNRQL-SISGVVLTKIDGDTRGGAALSVREITGKPIKFTGTGEKITDIETFHPDRMASRILGMGDLLTLIERASQ-EYDEKR-SMELAEKM-RE-NTFDFNDFIDQLDQVQNMGPMEDLLKMLPGMANNPAMKNFKVDENEIARKRAIVSSMTPEERENPDLLNPSRRRRIAAGSGNTFVDVNKFIKDFNQAKQMMQGVMSGDMNKMMKKMGIDPNNLPKDMPGMDGMDMSNLEGMMGQNGMPDLSSLGGDMDFSQMFGGGLKGKVGAFAAKQSMKRMANKMKKAKKKRK
21 PsiBlast_CBE 93.3348% -87 - C9 -2XXA SRP54_ECOLI C:[7-421] -------DRLSRTLRNISGR-----------GRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEV-NKSLTPGQEFVKIVRNELVAAMGEENQ-------T-LN--LAAQPPAV-----VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSA-DVYRPAAIKQLETLAEQVGVDFF-PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIK---------QVH-AS------I-----N------PVETLFVVDAMTGQDAANTAKAFNEAL-PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIES-KVDRAQ-AEKLASKL-KKGDGFDLNDFLEQLRQMKNMGGMASLMG----------------DDKVLVRMEAIINSMTMKERAKPEIIKGSRKRRIAAGSGMQVQDVNRLLKQFDDMQRMMKKMKK-----------------------------------------------------------------------------------------
1 PsiBlast_PDB 91.3248% -85 - C9 -2XXA SRP54_ECOLI A:[4-421] ----NLTDRLSRTLRNISGR-----------GRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEV-NKSLTPGQEFVKIVRNELVAAMGEENQ-------T-LN--LAAQPPAV-----VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSA-DVYRPAAIKQLETLAEQVGVDFF-PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIK---------QVH-AS------I-----N------PVETLFVVDAMTGQDAANTAKAFNEAL-PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIES-KVDRAQ-AEKLASKL-KKGDGFDLNDFLEQLRQMKNMGGMASLMGK---------------DDKVLVRMEAIINSMTMKERAKPEIIKGSRKRRIAAGSGMQVQDVNRLLKQFDDMQRMMKKMKK-----------------------------------------------------------------------------------------
102 HHSearch 87.9947% -58 - C- -2XXA SRP54_ECOLI A:[4-432] ----NLTDRLSRTLRNISGR-----------GRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAV-GHEVNKSLTPGQEFVKIVRNELVAAMGEENQ-------T-LN--LAAQPPAV-----VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSA-DVYRPAAIKQLETLAEQVGVDFF-PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIK---------QVH-AS------I-----N------PVETLFVVDAMTGQDAANTAKAFNEAL-PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMGDVLSLIEDIES-KVDRAQ-AEKLASKLKKG-DGFDLNDFLEQLRQMKNMGGMASLMGK---------------DDKVLVRMEAIINSMTMKERAKPEIIKGSRKRRIAAGSGMQVQDVNRLLKQFDDMQRMMKKMKK-----------------------------------------------------------------------------------------
23 PsiBlast_CBE 87.4242% -79 - C8 -2FFH SRP54_THEAQ B:[2-416] --FQQLSARLQEAIGRLRGR-----------GRITEEDLKATLREIRRALMDADVNLEVTRDFVERVREEALGKQV-LESLTPAEVILATVYEALKEALGGEA-----------------RLPVLKDRNLWFLVGLQGSGKTTTAAKLAL-YYKGKGRRPLLVAA-DTQRPAAREQLRLLGEKVGVPVL-EVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELA---------RLK-EV------L-----G------PDEVLLVLDAMTGQEALSVARAFDEKV-GVTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMGDVASLAEKVRA-A------------EL-------SLEDFLKQMQNLKRLGPFSEILGLLPGVP-----QGLKVDEKAIKRLEAIVLSMTPEERKDPRILNGSRRKRIAKGSGTSVQEVNRFIKAFEEMKALMKSLEK-----------------------------------------------------------------------------------------
7 PsiBlast_PDB 87.2233% -80 - C9 -3DM5 SRP54_PYRFU A:[1-435] MVLDNLGKALANTLKKIARA-----------SSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIQRRALEEKP-PAGISKKEHIIKIVYEELTKFLGTEAK-------P-IE--IKEK-PTI-----LLMVGIQGSGKTTTVAKLA-RYFQKRGYKVGVVCS-DTWRPGAYHQLRQLLDRYHIEVF-GNPQEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMK---------QIS-NV------I-----H------PHEVILVIDGTIGQQAYNQALAFKEAT-PIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLGDIQGLLEKFKELEKEVEI-KEEDIERF-LR-GKFTLKDMYAQLEAMRKMGP-------------------ISIGEERLKKFKVIMDSMTEEELLNPEIINYSRIKRIARGSGTSTKDVKELLDQYRQMKKLFKSMNKRQLS-------------------------------------------------------------------------------------
2 PsiBlast_PDB 87.2142% -78 - C8 -2FFH SRP54_THEAQ A:[2-416] --FQQLSARLQEAIGRLRGR-----------GRITEEDLKATLREIRRALMDADVNLEVTRDFVERVREEALGKQV-LESLTPAEVILATVYEALKEALGGEA-----------------RLPVLKDRNLWFLVGLQGSGKTTTAAKLAL-YYKGKGRRPLLVAA-DTQRPAAREQLRLLGEKVGVPVL-EVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELA---------RLK-EV------L-----G------PDEVLLVLDAMTGQEALSVARAFDEKV-GVTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMGDVASLAEKVRA-A------------EL-------SLEDFLKQMQNLKRLGPFSEILGLLPGVP-----QGLKVDEKAIKRLEAIVLSMTPEERKDPRILNGSRRKRIAKGSGTSVQEVNRFIKAFEEMKALMKSLEK-----------------------------------------------------------------------------------------
101 HHSearch 86.6934% -79 - C9 -3DM5 SRP54_PYRFU A:[1-435] MVLDNLGKALANTLKKIARA-----------SSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIQRRALEEKP-PAGISKKEHIIKIVYEELTKFLGTEAK-------P-IE---IKEKPTI-----LLMVGIQGSGKTTTVAKLARYFQK-RGYKVGVVCS-DTWRPGAYHQLRQLLDRYHIEVF-GNPQEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIEEMK---------QIS-NV------I-----H------PHEVILVIDGTIGQQAYNQALAFKEAT-PIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLGDIQGLLEKFKE-LEKEVEIKEEDIERF-LR-GKFTLKDMYAQLEAMRKMGP-------------------ISIGEERLKKFKVIMDSMTEEELLNPEIINYSRIKRIARGSGTSTKDVKELLDQYRQMKKLFKSMNKRQLS-------------------------------------------------------------------------------------
103 HHSearch 86.5343% -74 - C8 -2FFH SRP54_THEAQ A:[1-418] -MFQQLSARLQEAIGRLRGR-----------GRITEEDLKATLREIRRALMDADVNLEVTRDFVERVREEAL-GKQVLESLTPAEVILATVYEALKEALGGEAR---------L---PVLKDRNL-----WFLVGLQGSGKTTTAAKLALYYKG-KGRRPLLVAA-DTQRPAAREQLRLLGEKVGVPVL-EVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELA---------RLK-EV------L-----G------PDEVLLVLDAMTGQEALSVARAFDEKV-GVTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMGDVASLAEKVRA-A-------------------ELSLEDFLKQMQNLKRLGPFSEILGLLPGVPQG-----LKVDEKAIKRLEAIVLSMTPEERKDPRILNGSRRKRIAKGSGTSVQEVNRFIKAFEEMKALMKSLEK-----------------------------------------------------------------------------------------
24 PsiBlast_CBE 86.2851% -94 - C9 -4C7O SRP54_ECOLI C:[2-298] --FDNLTDRLSRTLRNISGR-----------GRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEV-NKSLTPGQEFVKIVRNELVAAMGEENQ-------T-LN--LAAQPPAV-----VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSA-DVYRPAAIKQLETLAEQVGVDFF-PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIK---------QVH-AS------I-----N------PVETLFVVDAMTGQDAANTAKAFNEAL-PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILGMG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 PsiBlast_CBE 86.2342% -77 - C8 -2FFH SRP54_THEAQ C:[2-416] --FQQLSARLQEAIGRLRGR-----------GRITEEDLKATLREIRRALMDADVNLEVTRDFVERVREEALGKQV-LESLTPAEVILATVYEALKEALGGEA-----------------RLPVLKDRNLWFLVGLQGSGKTTTAAKLAL-YYKGKGRRPLLVAA-DTQRPAAREQLRLLGEKVGVPVL-EVMDGESPESIRRRVEEKARLEARDLILVDTAGRLQIDEPLMGELA---------RLK-EV------L-----G------PDEVLLVLDAMTGQEALSVARAFDEKV-GVTGLVLTKLDGDARGGAALSARHVTGKPIYFAGVSEKPEGLEPFYPERLAGRILGMGDVASLAEKVRA-A------------EL-------SLEDFLKQMQNLKRLGPFSEILGLLPGVP-----QGLKVDEKAIKRLEAIVLSMTPEERKDPRILNGSRRKRIAKGSGTSVQEVNRFIKAFEEMKALMKSLEK-----------------------------------------------------------------------------------------
25 PsiBlast_CBE 85.8633% -80 - C9 -3DM5 SRP54_PYRFU B:[1-434] MVLDNLGKALANTLKKIARA-----------SSVDEALIKELVRDIQRALIQADVNVRLVLQLTREIQRRALEEKP-PAGISKKEHIIKIVYEELTKFLGTEAK-------P-IE--IKEK-PTI-----LLMVGIQGSGKTTTVAKLA-RYFQKRGYKVGVVCS-DTWRPGAYHQLRQLLDRYHIEVF-GNPQEKDAIKLAKEGVDYFKSKGVDIIIVDTAGRHKEDKALIE-MK---------QIS-NV------I-----H------PHEVILVIDGTIGQQAYNQALAFKEAT-PIGSIIVTKLDGSAKGGGALSAVAATGAPIKFIGTGEKIDDIEPFDPPRFVSRLLGLGDIQGLLEKFKELEKEVEI-KEEDIERF-LR-GKFTLKDMYAQLEAMRKMGP--------------------SIGEERLKKFKVIMDSMTEEELLNPEIINYSRIKRIARGSGTSTKDVKELLDQYRQMKKLFKSMNKRQL--------------------------------------------------------------------------------------
4 PsiBlast_PDB 84.7251% -98 - C9 -4C7O SRP54_ECOLI A:[4-296] ----NLTDRLSRTLRNISGR-----------GRLTEDNVKDTLREVRMALLEADVALPVVREFINRVKEKAVGHEV-NKSLTPGQEFVKIVRNELVAAMGEENQ-------T-LN--LAAQPPAV-----VLMAGLQGAGKTTSVGKLGKFLREKHKKKVLVVSA-DVYRPAAIKQLETLAEQVGVDFF-PSDVGQKPVDIVNAALKEAKLKFYDVLLVDTAGRLHVDEAMMDEIK---------QVH-AS------I-----N------PVETLFVVDAMTGQDAANTAKAFNEAL-PLTGVVLTKVDGDARGGAALSIRHITGKPIKFLGVGEKTEALEPFHPDRIASRILG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 84.2440% -82 - C9 -3NDB SRP54_METJA B:[1-420] --MDKLGENLNKALNKLKAA-----------AFVDKKLIKEVIKDIQRALIQADVNVKLVLKMSKEIERRALEEKT-PKGLSKKEHIIKIVYEELVKLLGEEAK-------K-LE--LNPKKQNV-----ILLVGIQGSGKTTTAAKLA-RYIQKRGLKPALIAA-DTYRPAAYEQLKQLAEKIHVPIYGDETRTKSPVDIVKEGMEKFK--KADVLIIDTAGRHKEEKGLLEEMK---------QIK-EI------T-----N------PDEIILVIDGTIGQQAGIQAKAFKEAVGEIGSIIVTKLDGSAKGGGALSAVAETKAPIKFIGIGEGIDDLEPFDPKKFISRLLGMGDLESLLEKAED-MVDEKT-EESIDAIM-R--GKFTLNELMTQLEAIENM-----------------------LTEAKIKKYKVIISSMTKEERENPKIIKASRIRRIARGSGTTENDVREVLRYYETTKN