@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1109: (2015-12-05 )
MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRETVTAYREYKQVIQNISDAEEMIKDASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDQKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVIDALVMYDQTQKLEALNK

Atome Classification :

(20 SA) -------------------.........10........20....-------....30........40....--....50.........60.......------.70........80...-.....90........100--......---.110.......120.....---------------..130-.........140.------......150.-......160.......170.......180.......190.......200.......210-.-.-.---.-...220.....-----..230.......240.....--------------------.---------------------.------250---.-----------------.---.-......260...--------------....270.......280.......290.--......300.......310.......320....-----------------...330....-----...340--.......350..--.....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------MNIYDQLQAVEDRYEELGELLSDPD-------VVSDTKRFMELSREEANTRE--TVTAY-REYKQVIQNISDAEEMIK------DASGDAELEEMAKEEL-KESKAAKEEYEERLKILL--LPKDPN---DDKNIILEIRGAAGGDEAA---------------LFA---GDLLTMYQKYAET------QGWRFEVMES-SVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE-E-V-E---Y-EIDQKDLRVDI-----YHASGAGGQNVNKVATAVRM--------------------V---------------------H------I-----P-----------------T---G-IKVEMQEERTQQ--------------KNRDKAMKIIRARVADHFAQIAQDEQDA--ERKSTVGTGDRSERIRTYNFPQNRVTDHRIGLT-----------------LQKLDTILSG-----KMDEVI--DALVMYDQTQKL--EALNK
1 PsiBlast_PDB 79.4348% -61 - C5 -2B3T - RF1_ECOLI B:[7-354] -----------------------AKLEALHERHEEVQALLGDAQ-------TIADQERFRALSREYAQLSD--VSRCF-TDWQQV----------------------------------------------QQLQVLL--LPKDPD---DERNAFLEVRAGTGGDEAA---------------LFA---GDLFRMYSRYAEA------RRWRVEIMSA-SEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELP-D-A-E---LPDVNPADLRIDT-----FRSSGAGGQHVNTTDSAIRI--------------------T---------------------H------L-----P-----------------T---G-IVVECQDERSQH--------------KNKAKALSVLGARI--HAAEMAKRQ------RRN-------SDRNRTYNFPQGRVTDHRINLT-----------------LYRLDEVMEG-----KLDMLI--EPIIQEHQADQL--A----
19 HHSearch 77.3548% -53 - C5 -2B3T - RF1_ECOLI B:[7-354] -----------------------AKLEALHERHEEVQALLGDAQ-------TIADQERFRALSREYAQLSD--VSRCF-TDWQQV----------------------------------------------QQLQVLL--LPKDPD---DERNAFLEVRAGTGGDEAA---------------LFA---GDLFRMYSRYAEA------RRWRVEIMSA-SEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQRVPATESQGRIHTSACTVAVMPELP-D-AEL---P-DVNPADLRIDT-----FRSSGAGGQHVNTTDSAIRI--------------------T---------------------H------L-----P-----------------T---G-IVVECQDERSQH--------------KNKAKALSVLGARIHAAEMAKRQ--------RRN-------SDRNRTYNFPQGRVTDHRINLT-----------------LYRLDEVMEG-----KLDMLI--EPIIQEHQADQL--A----
22 HHSearch 71.1745% -42 - C5 -1RQ0 - RF1_THEMA A:[1-333] ----------------------------MKEKKKEIEKLLARPD-------LTPE--QMKNYGMEYAKIEE--IENIT-NRIKETQE----FIELLR------E----E---GENELEI-EKYEKELDQLYQELLFLL--S---PE---ASDKAIVEIRPGTGGEEAA---------------LFA---RDLFRMYTRYAER------KGWNLEVAEI-HETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIE-E-K-D---I-EIRPEDLKIET-----FRASG----YVNKTESAVRI--------------------T---------------------H------L-----P-----------------T---G-IVVSCQNERSQY--------------QNKQTALRILRARLYQLQKEQKEREISQ------------RSEKIRTYNFPQNRVTDHRINYT-----------------SYRLQEILDG-----DLDEII--SKLIEHDIENNL--EEVL-
2 PsiBlast_PDB 69.6953% -57 - C5 -1RQ0 - RF1_THEMA A:[76-330] ----------------------------------------------------------------------------------------------------------------------------------------LL--FLLSPE---ASDKAIVEIRPGTGGEEAA---------------LFA---RDLFRMYTRYAER------KGWNLEVAEI-HETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIE-E-K-D---I-EIRPEDLKIET-----FRASG----YVNKTESAVRI--------------------T---------------------H------L-----P-----------------T---G-IVVSCQNERSQY--------------QNKQTALRILRARLYQLQKEQKEREISQ------------RSEKIRTYNFPQNRVTDHRINYT-----------------SYRLQEILDG-----DLDEII--SKLIEHDIENNL--EEVL-
18 HHSearch 68.0592% 29 - C5 -1ZBT - RF1_STRMU A:[3-358] ---------------------IYDQLQAVEDRYEEL---------------------------REEANSRE--TVAVY-REYKQVVQNIADAQEM-------------PELEEMAKEEL-KNSKVAKEEYEEKLRFLL--LPKDPN---DDKNIILEIRGAAGGDEAA---------------LFA---GDLLNMYQKYAEN------QGWKFEVMEA-SANGVGGLKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVE-E-V-E---Y-EIDPKDLRVDI-----YHA---------KVATAVRI--------------------I---------------------H------L-----P-----------------T---N-IKVEMQEERTQQ--------------KNRDKAMKIIRARVADHFAQIAQDEQDA------TVGTGDRSERIRTYNFPQNRVTDHRIGLT-----------------LQKLDSILSG-----KLDEVI--DALILYDQTQKL--EELN-
6 PsiBlast_PDB 52.9234% 28 - C5 -1GQE - RF2_ECOLI A:[24-359] ----------------------YLDYDAKKERLEEVNAELEQPD-------VWNEPERAQALGKERSSLEA--VVDTL-DQMKQGLEDVSGLLELAV------EADDE--------ETF-NEAVAELDALEEKLAQLE--FRRMFSGEYDSADCYLDIQAGSGGTEAQ---------------DWA---SMLERMYLRWAES------RGFKTEIIEE-SEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVD-DDI-D---I-EINPADLRIDV-----YRASGAGGQHVNRTESAVRI--------------------T---------------------H------I-----P-----------------T---G-IVTQCQNDRSQH--------------KNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVE-----------------TRNTQAVLDG-----SLDQFI--EASLKAGL-----------
20 HHSearch 52.1034% 34 - C5 -1GQE - RF2_ECOLI A:[25-363] -----------------------LDYDAKKERLEEVNAELEQPD-------VWNEPERAQALGKERSSLEA--VVDTL-DQMKQGLEDVSGLLELAV------EA-DDEETFNEAVAEL-DALEEKLAQLEFR----R--MFSGEY---DSADCYLDIQAGSGGTEAQ---------------DWA---SMLERMYLRWAES------RGFKTEIIEE-SEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDD-I-D---I-EINPADLRIDV-----YRASGAGGQHVNRTESAVRI--------------------T---------------------H------I-----P-----------------T---G-IVTQCQNDRSQH--------------KNKDQAMKQMKAKLYEVEMQKKNAEKQA--MED-NKSDIGWGSQIRSYVLDDSRIKDLRTGVE-----------------TRNTQAVLDG-----SLDQFI--EASLKAGL-----------
3 PsiBlast_PDB 49.7953% 111 - C- -2FVO - RF1_THEMA A:[76-330] ----------------------------------------------------------------------------------------------------------------------------------------LL--FLLSPE---ASDKAIVEIRPGTGGEEAA---------------LFA---RDLFRMYTRYAER------KGWNLEVAEI-HETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVPVTESGGRIHTSTATVAVLPEIE-E-K-D---I-EIRPEDLKIET-----FRASG---------ESAVRI--------------------T---------------------H------L-----P-----------------T---G-IVVSCQNERSQY--------------QNKQTALRILRARLYQLQKEQKEREISQ------------RSEKIRTYNFPQNRVTDHRINYT-----------------SYRLQEILDG-----DLDEII--SKLIEHDIENNL--EEVL-
5 PsiBlast_PDB 46.3734% 164 - C- -1ML5 RF2_ECOLI Z:[24-359] ----------------------YLDYDAKKERLEEVNAELEQPD-------VWNEPERAQALGKERSSLEA--VVDTL-DQMKQGLEDVSGLLEL----------AVEADDEETFNEAV-AELDALEEKLAQ-LEFRR--MFSGEY---DSADCYLDIQAGSGGTEAQ---------------DWA---SMLERMYLRWAES------RGFKTEIIEE-SEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVD-DDI-D---I-EINPADLRIDV-----YRTSGAGGQHVNRTESAVRI--------------------T---------------------H------I-----P-----------------T---G-IVTQCQNDRSQH--------------KNKDQAMKQMKAKLYELEMQKKNAEKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVE-----------------TRNTQAVLDG-----SLDQFI--EASLKAGL-----------
4 PsiBlast_PDB 46.3734% 164 - C- -1MI6 - RF2_ECOLI A:[24-359] ----------------------YLDYDAKKERLEEVNAELEQPD-------VWNEPERAQALGKERSSLEA--VVDTL-DQMKQGLEDVSGLLEL----------AVEADDEETFNEAV-AELDALEEKLAQ-LEFRR--MFSGEY---DSADCYLDIQAGSGGTEAQ---------------DWA---SMLERMYLRWAES------RGFKTEIIEE-SEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVD-DDI-D---I-EINPADLRIDV-----YRASGAGGQHVNRTESAVRI--------------------T---------------------H------I-----P-----------------T---G-IVTQCQNDRSQH--------------KNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDNKSDIGWG---SQIRSYVLDDSRIKDLRTGVE-----------------TRNTQAVLDG-----SLDQFI--EASLKAGL-----------
23 HHSearch 42.1024% -32 - C5 -2RSM - CL065_MOUSE A:[4-110] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GSSGKWGLRLQEKPALLFPG-MAASTVQVAGRKDYP---A-L---L-PLNESELEEQF-----VKGHGPGGQATNKTSNCVVL--------------------K---------------------H------V-----P-----------------S---G-IVVKCHQTRSVD--------------QNRKIARKVLQEKVDVFYNSGPSSG-------------------------------------------------------------------------------------------------
39 Fugue 40.9320% -26 - C3 -4Q3K ? A:[20-260] ---------------------------------------------------------QGMNISKITINQHVGVTLTCYVQDVSQEMSNMSKRPAMLIFPGGGYQFCSDREAEPIALSYL-AKG----------YNAFV--LRYSVK---EH----------AVFPRPL---------------IDA---EDALSYLKDNAHA------LHINPDKIAV-IGFSAGGHLATTLATEGKVRPN---------------------------AVVLGYPALI-R-H-E---K-YWNFPTPKVD------------------QQTPEMFV--------------------F---------------------H------T-----F-----------------E---D-DLVPL------------------------------------SHPLYIVEELSKA--------------------NIPVEFHLFKSGVHG-----------------LSLGNKIVSN-----GLDKMIEDDVQVWFDLSCRWLDKVLDL
27 HHSearch 40.6732% -13 - C5 -2JY9 - ? A:[7-102] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------T---V-SIADNELEITA-----IRAQGAGGQHVNKTSSAIHL--------------------RFDIRASGLPEYYKQRLLTASHH------L-----I-----------------SDDGV-IIIKAQEFRSQE--------------LNREAAIARLVAVIKELTAEQKSRRATR--PTRASKERRLSSKAQKSSVKALRGKVRRPLDLE-----------------HHHHHH------------------------------------
7 PsiBlast_PDB 40.6330% -27 - C5 -2RSM - CL065_MOUSE A:[43-104] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LNESELEEQF-----VKGHGPGGQATNKTSNCVVL--------------------K---------------------H------V-----P-----------------S---G-IVVKCHQTRSVD--------------QNRKIARKVLQEKVDVFYNSGPSSG-------------------------------------------------------------------------------------------------
32 Fugue 40.0818% -7 - C5 -1SET - SYS_THET2 A:[1-110] ----------------------MVDLKRLRQEPEVFHRAIREKG-------VALDLEALLALDREVQELKK--RLQEV-QTERNQVAKRVPKAPPEE------KEALIARGKAL-GEEA-KRLEEALREKEARLEALLLQVPLPPW---PGAPVGGEEANREIKRVGG---------------PPE---FSFPPLDHVALME------KNGWWEPRIS-QVSGSRSYALKGDLALYELALLRFAMDFMARRGFLPMTLPSYAREKAFLGTGHFPAYRD-Q-V-W---A-IAETDLYLTGT-----AEVVLNALHSGEILPYEALP--------------------L---------------------R------Y-----A-----------------G---Y-APAFRSEAGSFG--------------KDVRGLMRVHQFHKVEQYVLTEASLEAS--DRAFQELLENAEEILRLLELPYRLVEVATGDMG-----------------PGKWRQVDIE-----VYLPSE--GRYRETHSCSAL--LDWQA
25 HHSearch 39.8431% -19 - C5 -2JVA - ? A:[7-101] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------N---V-HLPDAEIELTA-----IRAQGAGGQNVNKVSSAMHL--------------------R---------------------FDINASSL-----PPFYKERLLALNDSRITSD---GVIVLKAQQYRTQE--------------QNRADALLRLSELIVNAAKLEHHHHHH-----------------------------------------------------------------------------------------------
40 Fugue 34.5715% 13 - C2 -5A1F KDM5B_HUMAN A:[1-458] SMFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLHFTPRIQRLNELE--AQTRV-RDYT--LRTFGEMADAFK------SDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEY--GADIAS---KEFGSGFPVRDSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEP--KTWYGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLV-TIMNPNTLM-T-H-EVPVY-RTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTV--------------------D---------------------W------L-----P-----------------L---G-RQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKAL--RETVRKLGVIDSERMDFELLPDDERQCVKCKTTCFMSAISCSCKPGLLVCLHHVKELCSCPPYKYKLRYRY--TLDDLYPMMNAL--KLRAE
29 HHSearch 34.175% 102 - C5 -2A26 - CYBP_HUMAN A:[7-47] ----------------------------------------------------------------------------------EELQKDLEEVKVLLE------KA-TRKRVRDALTAEK-SKIETEIKNKMQQK----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 HHSearch 33.5027% 9 - C5 -1J26 - ICT1_MOUSE A:[13-108] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------A-S---S-YIPLDRLSISY-----CRSSGPGGQNVNKVNSKAEVRFHLASADWIEEPVRQKIALT---------------------H------KNKINKA-----------------G---E-LVLTSESSRYQF--------------RNLAECLQKIRDMIAEASGPSSG---------------------------------------------------------------------------------------------------
30 HHSearch 33.225% 108 - C5 -1YSM - CYBP_MOUSE A:[5-47] ---------------------------------------------------------------------------------LEELQKDLEEVKVLLE------KS-TRKRLRDTLTSEK-SKIETELKNKMQQKSQKK--PE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------