@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1333: (2015-12-07 )
MVLTEQKRKYMEKLSDENGIISALAFDQRGALKRLMAQYQEAEPTVEQMEDLKVLVAEELTPYASSMLLDPEYGLPATKALDKNAGLLLAYEKTGYDTSSTKRLPDCLDVWSAKRIKEQGSDAVKFLLYYDVDSSDELNQQKQAYIERVGSECVAEDIPFFLEILAYDEKIADAGSAEYAKVKPRKVIEAMKVFSDSRFNIDVLKVEVPVNVKYVEGFGDGEVIHTRGEAAAFFKQQDEATNLPYIYLSAGVAAKLFQETLIFAHESGANFNGVLCGRATWAGSVKEYIEQGEEAARQWLRTTGYQNIEELNQVLKQTATSWKERV

Atome Classification :

(20 SA) .........10......-..20........30........40.-......-.50-----........60........70.......---.80..--.......90...-.-....100...---....-110.......120.......130.......140.......150.......160.......170.......180..-.....190.......200.....--..210........220.......230.......-240.......250.--.......260......-.270.......280.......290.......300.......310.......320....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MVLTEQKRKYMEKLSDE-NGIISALAFDQRGALKRLMAQYQEA-EPTVEQ-MED-----LKVLVAEELTPYASSMLLDPEYGLPAT---KA-LD--KNAGLLLAYEKT-G-YDTSSTKRLP---DCLD-VWSAKRIKEQGSDAVKFLLYYDVDSSDELNQQKQAYIERVGSECVAEDIPFFLEILAYDEKIADAGSAEYAKVKP-RKVIEAMKVFSDSRFNIDVLKVE--VPV-NVKYVEGFGDGEVIHTRGEAAAFFKQQDE-ATNLPYIYLSA-GV--AAKLFQETLIFAHESG-ANFNGVLCGRATWAGSVKEYIEQGEEAARQWLRTTGYQNIEELNQVLKQTATSWKERV
3 PsiBlast_PDB 97.5472% -86 - C5 -3KAO LACD_STAAM A:[7-328] ---SNQKIASIEQLSNN-EGIISALAFDQRGALKRMMAKHQTE-EPTVAQ-IEQ-----LKVLVAEELTQYASSILLDPEYGLPAS---DA-RN--KDCGLLLAYEKT-G-YDVNAKGRLP---DCLV-EWSAKRLKEQGANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNIPDNGSVEFAKVKP-RKVNEAMKLFSEPRFNVDVLKVE--VPV-NMKYVEGFAEGEVVYTKEEAAQHFKDQDA-ATHLPYIYLSA-GV--SAELFQETLKFAHEAG-AKFNGVLCGRATWSGAVQVYIEQGEDAAREWLRTTGFKNIDDLNKVLKDTATSWKQRK
6 PsiBlast_PDB 97.3471% -87 - C5 -3JRK LACD2_STRP1 A:[1-321] ---TENKRKSMEKLS-V-DGVISALAFDQRGALKRMMAQHQTK-EPTVEQ-IEE-----LKSLVSEELTPFASSILLDPEYGLPAS---RV-RS--EEAGLLLAYEKT-G-YDATTTSRLP---DCLD-VWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEILTYDEKIADNASPEFAKVKA-HKVNEAMKVFSKERFGVDVLKVE--VPV-NMKFVEGFADGEVLFTKEEAAQAFRDQEA-STDLPYIYLSA-GV--SAKLFQDTLVFAAESG-AKFNGVLCGRATWAGSVKVYIEEGPQAAREWLRTEGFKNIDELNKVLDKTASPWTEKM
2 PsiBlast_PDB 97.2271% -85 - C5 -3MHG LACD2_STRP1 A:[3-325] -TLTENKRKSMEKLS-V-DGVISALAFDQRGALKRMMAQHQTK-EPTVEQ-IEE-----LKSLVSEELTPFASSILLDPEYGLPAS---RV-RS--EEAGLLLAYEKT-G-YDATTTSRLP---DCLD-VWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEILTYDEKIADNASPEFAKVKA-HKVNEAMKVFSKERFGVDVLKVE--VPV-NMKFVEGFADGEVLFTKEEAAQAFRDQEA-STDLPYIYLSA-GV--SAKLFQDTLVFAAESG-AKFNGVLCGRATWAGSVKVYIEEGPQAAREWLRTEGFKNIDELNKVLDKTASPWTEK-
22 PsiBlast_CBE 97.1771% -86 - C5 -3MHG LACD2_STRP1 C:[3-324] -TLTENKRKSMEKLS-V-DGVISALAFDQRGALKRMMAQHQTK-EPTVEQ-IEE-----LKSLVSEELTPFASSILLDPEYGLPAS---RV-RS--EEAGLLLAYEKT-G-YDATTTSRLP---DCLD-VWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEILTYDEKIADNASPEFAKVKA-HKVNEAMKVFSKERFGVDVLKVE--VPV-NMKFVEGFADGEVLFTKEEAAQAFRDQEA-STDLPYIYLSA-GV--SAKLFQDTLVFAAESG-AKFNGVLCGRATWAGSVKVYIEEGPQAAREWLRTEGFKNIDELNKVLDKTASPWTE--
21 PsiBlast_CBE 97.1571% -85 - C5 -3MHG LACD2_STRP1 D:[3-326] -TLTENKRKSMEKLS-V-DGVISALAFDQRGALKRMMAQHQTK-EPTVEQ-IEE-----LKSLVSEELTPFASSILLDPEYGLPAS---RV-RS--EEAGLLLAYEKT-G-YDATTTSRLP---DCLD-VWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEILTYDEKIADNASPEFAKVKA-HKVNEAMKVFSKERFGVDVLKVE--VPV-NMKFVEGFADGEVLFTKEEAAQAFRDQEA-STDLPYIYLSA-GV--SAKLFQDTLVFAAESG-AKFNGVLCGRATWAGSVKVYIEEGPQAAREWLRTEGFKNIDELNKVLDKTASPWTEKM
1 PsiBlast_PDB 96.9871% -84 - C5 -3MHF LACD2_STRP1 A:[3-324] -TLTENKRKSMEKLS-V-DGVISALAFDQRGALKRMMAQHQTK-EPTVEQ-IEE-----LKSLVSEELTPFASSILLDPEYGLPAS---RV-RS--EEAGLLLAYEKT-G-YDATTTSRLP---DCLD-VWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEILTYDEKIADNASPEFAKVKA-HKVNEAMKVFSKERFGVDVLKVE--VPV-NMKFVEGFADGEVLFTKEEAAQAFRDQEA-STDLPYIYLSA-GV--SAKLFQDTLVFAAESG-AKFNGVLCGRATWAGSVKVYIEEGPQAAREWLRTEGFKNIDELNKVLDKTASPWTE--
26 HHSearch 96.9772% -84 - C5 -3IV3 LACD2_STRMU A:[4-329] MILSQQKYNYLAKVSDS-NGVISALAFDQRGALKCLMAQYQMK-EPTVAQ-MEE-----LKVLVSEELTPYASSILLDPEYGLPAA---QA-RD--REAGLLLAYEKT-G-YDANTTSRLP---DCLV-DWSIKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKV-HKVNDAMKVFSAERFGIDVLKVE--VPV-NMVYVEGFAEGEVVYSKEEAAQAFREQEA-STDLPYIYLSA-GV--SAELFQETLVFAHKAG-AKFNGVLCGRATWAGSVQVYMEEGKEAARQWLRTSGLQNINELNKVLKTTASPWTEKV
23 PsiBlast_CBE 96.9571% -85 - C5 -3MHG LACD2_STRP1 B:[2-324] ITLTENKRKSMEKLS-V-DGVISALAFDQRGALKRMMAQHQTK-EPTVEQ-IEE-----LKSLVSEELTPFASSILLDPEYGLPAS---RV-RS--EEAGLLLAYEKT-G-YDATTTSRLP---DCLD-VWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEILTYDEKIADNASPEFAKVKA-HKVNEAMKVFSKERFGVDVLKVE--VPV-NMKFVEGFADGEVLFTKEEAAQAFRDQEA-STDLPYIYLSA-GV--SAKLFQDTLVFAAESG-AKFNGVLCGRATWAGSVKVYIEEGPQAAREWLRTEGFKNIDELNKVLDKTASPWTE--
25 PsiBlast_CBE 96.8871% -84 - C5 -3MHF LACD2_STRP1 C:[2-325] ITLTENKRKSMEKLS-V-DGVISALAFDQRGALKRMMAQHQTK-EPTVEQ-IEE-----LKSLVSEELTPFASSILLDPEYGLPAS---RV-RS--EEAGLLLAYEKT-G-YDATTTSRLP---DCLD-VWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEILTYDEKIADNASPEFAKVKA-HKVNEAMKVFSKERFGVDVLKVE--VPV-NMKFVEGFADGEVLFTKEEAAQAFRDQEA-STDLPYIYLSA-GV--SAKLFQDTLVFAAESG-AKFNGVLCGRATWAGSVKVYIEEGPQAAREWLRTEGFKNIDELNKVLDKTASPWTEK-
7 PsiBlast_PDB 96.4667% -85 - C5 -3MYO - LACD1_STRP1 A:[2-325] -TITANKRHYLEKVSHQ--GIISALAFDQRGALKQMMAAHQEG-EATVTQ-IET-----LKVLVSEELTPYASSILLDPEYGLLAT---KV-RA--NQTGLLLAYEKT-G-YDATTTSRLP---DCLV-EWSVKRLKAAGADAIKFLLYYDVDGDEQINLQKQAYIERIGSECTAEDIPFFLELLSYDERISDNNSAAYAKLKP-HKVNGAMSVFSDKRFGVDVLKVE--VPV-NMAYVEGFTEGEVHYSQAEAIKAFQDQEA-ASHLPYIYLSA-GV--SAKLFQETLYFAAAAG-AQFSGVLCGRATWAGSVPVYITKGEDEARKWLCTEGFQNIDELNRVLEETASPWTEKI
5 PsiBlast_PDB 96.3470% -84 - C5 -3IV3 LACD2_STRMU A:[5-329] -ILSQQKYNYLAKVSDS-NGVISALAFDQRGALKCLMAQYQMK-EPTVAQ-MEE-----LKVLVSEELTPYASSILLDPEYGLPAA---QA-RD--REAGLLLAYEKT-G-YDANTTSRLP---DCLV-DWSIKRLKEAGADAVKFLLYYDVDGDPQVNVQKQAYIERIGSECQAEDIPFFLEILTYDETISNNSSVEFAKVKV-HKVNDAMKVFSAERFGIDVLKVE--VPV-NMVYVEGFAEGEVVYSKEEAAQAFREQEA-STDLPYIYLSA-GV--SAELFQETLVFAHKAG-AKFNGVLCGRATWAGSVQVYMEEGKEAARQWLRTSGLQNINELNKVLKTTASPWTEKV
24 PsiBlast_CBE 95.5171% -84 - C5 -3MHF LACD2_STRP1 D:[2-324] ITLTENKRKSMEKLS-V-DGVISALAFDQRGALKRMMAQHQTK-EPTVEQ-IEE-----LKSLVSEELTPFASSILLDPEYGLPAS---RV-RS--EEAGLLLAYEKT-G-YDATTTSRLP---DCLD-VWSAKRIKEAGAEAVKFLLYYDIDGDQDVNEQKKAYIERIGSECRAEDIPFYLEILTYDEKIADNASPEFAKVKA-HKVNEAMKVFSKERFGVDVLKVE--VPV-NMKFVEGFADGEVLFTKEEAAQAFRDQEA-STDLPYIYLSA-GV--SAKLFQDTLVFAAESG-AKFNGVLCGRATWAGSVKVYIEEGPQAAREWLRTEGFKNIDELNKVLDKTASPWTE--
4 PsiBlast_PDB 66.3972% 17 - C5 -3MYP - LACD_STAAC A:[4-324] ---SNQKIASIEQLSNN-EGIISALAFDQRGALKRMMAKHQTE-EPTVAQ-IEQ-----LKVLVAEELTQYASSILLDPEYGLPAS---DA-RN--KDCGLLLAYEKT-G-YDVNAKGRLP---DCLV-EWSAKRLKEQGANAVKFLLYYDVDDAEEINIQKKAYIERIGSECVAEDIPFFLEVLTYDDNIPDNGSVEFAKVKP-RKVNEAMKLFSEPRFNVDVLKVE--VPV-NMKYVEGFAEGEVVYTKEEAAQHFKDQDA-ATHLPYIYLSA-GV--SAELFQETLKFAHEAG-AKFNGVLCGRATWSGAVQVYIEQGEDAAREWLRTTGFKNIDDLNKVLKDTATSWKQ--
27 HHSearch 65.9824% -67 - C5 -1TO3 SQUT_SALTY A:[3-293] -----LNNYTIKDITRA-SGGFAMLAVDQREAMRLMFAAAGAKTPVADSV-LTD-----FKVNAAKILSPYASAVLLDQQFCYRQA---VEQNAVAKSCAMIVAADDF-I-PGNGIPVDNV---VLDK-KINAQAVKRDGAKALKLLVLWRSDED---AQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGD-------KFDREQAIIDAAKELG--DSGADLYKVE--MPL-YGK---GA--------RSDLLTASQRLNG-HINMPWVILSS-GV--DEKLFPRAVRVAMEAG-A--SGFLAGRAVWSSVIGLPD-T-----ELMLRDVSAPKLQRLGEIVDEMMGKR----
8 PsiBlast_PDB 65.3726% -77 - C5 -1TO3 SQUT_SALTY A:[8-262] ----------IKDITRA-SGGFAMLAVDQREAMRLMFAAAGAK-TPVADSVLTD-----FKVNAAKILSPYASAVLLDQQFCYRQAVEQNA-VA--KSCAMIVAAD------DFIPGNGIPVDNVVLDKKINAQAVKRDGAKALKLLVLW---RSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQA-------IIDAAKELGDS--GADLYKVE--MPL--------YGKG----ARSDLLTASQRLNG-HINMPWVILSS-GV--DEKLFPRAVRVAMEAG-A--SGFLAGRAVWSSVIGLPDTELMLRDVSAPKLQRLGEIVDEMMGKR----------
47 Fugue 52.5915% -60 - C5 -1OJX - ALF1_THETK A:[3-252] ----NLTEKFLRIFARR-GKSIILA-------YDHGIEHGPAD-FMDNPD-SAD-----PEYILRLARDAGFDGVVFQ---RGIAE---KY-YD--GSVPLILKL----N-GKTTLYNGEP---VSVA-NCSVEEAVSLGASAVGYTIYPG----SGFEWKMFEELARIKRDAVKFDLPLVVWSYPRGGKVVNETAPEIVAYAA-RIALEL---------GADAMKIK--YT-------------------GDPKTFSWAVKV-AGKVP-VLMSG-GP--KTKTEEDFLKQVEGVLEAGALGIAVGRNVW----------------------QRRDALKFARALAELVYG-----
32 HHSearch 51.9415% -69 - C5 -2QJG ADHS_METJA A:[6-246] DIKNLGKLVRLERIFNRESEKTVIVPMDHGVSNGPI------------KG-LID-----IRKTVNDVAEGGANAVLLHKGIVRHGH---RG-YG--KDVGLIIHLSGG-T-AIS---PNPL---KKVI-VTTVEEAIRMGADAVSIHVNVGSDED----WEAYRDLGMIAETCEYWGMPLIAMMYPRGKHIQ-------NERDP-ELVAHAARLGA--ELGADIVKTS--YTG-DI-------------------DSFRDVVK-GCPAPVVVAGG-PKTNTDEEFLQMIKDAMEAG-A--AGVAVGRNIFQHDDVVGITRAVCKIVHENADVEEALKEIRK--------------
30 HHSearch 48.8216% -57 - C5 -1W8S ALF1_THETK A:[3-240] -----NLTEKFLRIFAR-RGKSIILAYDHGIEHGPA------------DF-MDNPDSADPEYILRLARDAGFDGVVFQRGIAE-KY---Y---D--GSVPLILKLNGKTT-LYN----GEP---VSVA-NCSVEEAVSLGASAVGYTIYPGSGF----EWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVN-------ETAP-EIVAYAARIAL--ELGADAMKIK--YTG-DP-------------------KTFSWAVKVAGKVPVLMSGG-PKTKTEEDFLKQVEGVLEAG-A--LGIAVGRNVWQRRDALKFARALAELVY----------------------------
29 HHSearch 45.9214% -69 - C5 -3GLC LSRF_ECOLI A:[35-266] -ALDWGMQSRLSRIFNPKTGKTVMLAFDHGYFQGPT------------TG-LER-----IDINIAPLF-EHADVLMCTRGILR-SV---VP-PA--TNRPVVLRASGA-NSILA----ELS---NEAV-ALSMDDAVRLNSCAVAAQVYIGSEY----EHQSIKNIIQLVDAGMKVGMPTMAVTGV--------------VRDQ-RYFSLATRIAA--EMGAQIIKTY--YVE----------------------KGFERIVA-GCPVPIVIAGGKKL--PEREALEMCWQAIDQG-A--SGVDMGRNIFQSDHPVAMMKAVQAVVHHNETADRAYELYLSE-------------
33 HHSearch 42.1714% -37 * C5 *3NDO ? A:[9-230] ------------------TRAQVAALVDHTLLK-PE------------AT-PSD-----VTALVDEAADLGVFAVCVSPPLVS-VA---AGVAP--SGLAIAAVA----G-F-PS--GKHV---PGIK-ATEAELAVAAGATEIDMVIDVGAALAGD-LDAVSADITAVRKAVRAATLKVIVESAALLEF-----------SGE-PLLADVCRVAR--DAGADFVKTSTGFHPSGGA------------SVQ-AVEIMARTVG--ERLGVKASGG-IR--TA----EQAAAMLDAG-ATRLGLSGSRAVLDGFGSA---------------------------------------