@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : gbs1462: (2015-12-08 )
MSHIKAENIIVSYDQKEIINNLSLSILNQKITTIIGANGCGKSTLLKALTRIHKIKDGTITIDGHDIAHLPTKEIAKKIALLPQVLEATEGITVYELISYGRFPHQKYLGNLTNDDRSKIHWAMEMTNVAQFANRDVDDLSGGQRQKVWIAMALAQDTDTIFLDEPTTYLDMNHQLEVLELLKKLNNETQKTIIMVLHDLNLSARYSDYLVAMKTGKIIYEGSPSQIMTKDIIKDIFKIDAHIIQDPISKQPVLLSYQLSTDQN
Atome Classification :
(20 SA)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10..--..----..-----..----20........30........40........50........60......----.--.--70..---..-..----..80......---..90........100-....-.------...110--.---.......120.......130----....-----------....140---------.........150....------...160.......170.......180......-.190.......200.......210.......220.......230.......240.......250.......260..--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MSHIKAE
N
I
I
V
SY--
D
Q
----
K
E
-----
I
I
----
N
N
L
S
L
S
I
L
N
Q
K
I
T
T
I
IGANGC
G
K
S
T
L
L
K
A
L
T
R
I
H
KIKD
G
T
I
T
IDGHDI----A--H--L
P
T
K
---
E
I
-
A
K
----
K
I
A
L
L
P
Q
V
L
E
---ATEG
I
T
V
Y
E
L
I
S
YG--RF
P
H
-
Q
------
K
Y
L
GN---L---TNDD
R
S
K
I
H
W
A
M
E
M
T
N
V
A
-
Q
----
F
ANR-----------D
V
D
DL-----------SGGQ
R
Q
K
V
W
I
A
M
A
LAQ------DT
D
T
I
F
LDEPT
T
Y
LDMNH
Q
L
E
V
L
E
L
L
K
K
LNNE-T
Q
K
T
I
I
M
V
L
HDLNLSARYS
D
Y
L
V
A
M
KT
G
K
I
I
YEGSPSQ
I
M
T
K
D
I
I
K
D
I
F
K
I
D
A
H
I
IQDPISKQ
P
V
L
L
S
Y
Q
LSTDQN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
86.27
32%
-117
- C1 -
4G1U
1
HMUV_YERPE
C:
[12-260]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
A
S
H
L
H
Y
H
V
--
Q
Q
----
Q
A
-----
L
I
----
N
D
V
S
L
H
I
A
S
G
E
M
V
A
I
I
G
P
N
G
A
G
K
S
T
L
L
R
L
L
T
G
Y
L
S
P
S
H
G
E
C
H
L
L
G
Q
N
L
----
N
--
S
--
W
Q
P
K
---
A
L
-
A
R
----
T
R
A
V
M
R
Q
Y
S
E
---
L
A
F
P
F
S
V
S
E
V
I
Q
M
G
--
R
A
P
----------
Y
G
G
S
---------
Q
D
R
Q
A
L
Q
Q
V
M
A
Q
T
D
C
L
-
A
----
L
A
Q
R
-----------
D
Y
R
V
L
-----------
S
G
G
E
Q
Q
R
V
Q
L
A
R
V
L
A
Q
L
WQPQP
T
P
R
W
L
F
L
D
E
P
T
S
A
L
D
L
Y
H
Q
Q
H
T
L
R
L
L
R
Q
L
T
R
Q
-
E
P
L
A
V
C
C
V
L
H
D
L
N
L
A
A
L
Y
A
D
R
I
M
L
L
A
Q
G
K
L
V
A
C
G
T
P
E
E
V
L
N
A
E
T
L
T
Q
W
Y
Q
A
D
L
G
V
S
R
H
P
E
S
A
L
P
Q
I
Y
L
R
Q
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
PsiBlast_CBE
86.26
32%
-117
- C1 -
4G1U
1
HMUV_YERPE
D:
[12-260]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
A
S
H
L
H
Y
H
V
--
Q
Q
----
Q
A
-----
L
I
----
N
D
V
S
L
H
I
A
S
G
E
M
V
A
I
I
G
P
N
G
A
G
K
S
T
L
L
R
L
L
T
G
Y
L
S
P
S
H
G
E
C
H
L
L
G
Q
N
L
----
N
--
S
--
W
Q
P
K
---
A
L
-
A
R
----
T
R
A
V
M
R
Q
Y
S
E
---
L
A
F
P
F
S
V
S
E
V
I
Q
M
G
--
R
A
P
----------
Y
G
G
S
---------
Q
D
R
Q
A
L
Q
Q
V
M
A
Q
T
D
C
L
-
A
----
L
A
Q
R
-----------
D
Y
R
V
L
-----------
S
G
G
E
Q
Q
R
V
Q
L
A
R
V
L
A
Q
LWQPQP
T
P
R
W
L
F
L
D
E
P
T
S
A
L
D
L
Y
H
Q
Q
H
T
L
R
L
L
R
Q
L
T
R
Q
-
E
P
L
A
V
C
C
V
L
H
D
L
N
L
A
A
L
Y
A
D
R
I
M
L
L
A
Q
G
K
L
V
A
C
G
T
P
E
E
V
L
N
A
E
T
L
T
Q
W
Y
Q
A
D
L
G
V
S
R
H
P
E
S
A
L
P
Q
I
Y
L
R
Q
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
52
Fugue
77.91
28%
-97
- C1 -
3B60
2
MSBA_SALTY
A:
[10-581]
-----------------------------------------------------------------------------W
Q
T
F
R
R
L
W
P
T
I
A
PFK
A
G
L
I
V
A
G
I
A
L
I
L
N
A
A
S
D
T
F
M
L
S
L
LKPLLDDGFGKTDRSVLLW
M
P
L
V
V
I
G
L
M
I
L
R
G
I
T
S
Y
I
S
S
Y
C
I
S
W
V
S
G
K
V
V
M
T
M
R
R
R
L
F
G
H
M
M
G
MPVAFFDKQS
T
G
T
L
L
S
R
I
T
Y
D
S
E
Q
V
A
S
S
S
S
G
A
L
I
T
V
V
R
E
G
A
S
I
I
G
L
F
I
M
M
FYYS
W
Q
L
S
I
I
L
V
V
L
A
P
I
V
S
I
A
I
R
V
V
S
K
R
F
R
S
I
S
K
N
M
Q
N
T
M
G
Q
V
T
T
S
A
E
Q
M
L
K
G
H
KEVLIFGG
Q
E
V
E
T
K
R
F
D
K
V
S
N
K
M
R
L
Q
G
M
K
M
V
S
A
S
S
I
S
D
P
I
I
Q
L
I
A
S
L
A
L
A
F
V
L
Y
A
A
S
FPSVMDSLT
A
G
T
I
T
V
V
F
S
S
M
I
A
L
M
R
P
L
K
S
L
T
N
V
N
A
Q
F
Q
R
G
M
A
A
C
Q
T
L
F
A
I
L
D
SEQEK
D
E
G
K
RVIDRA
T
G
D
L
E
F
R
N
V
T
F
T
Y
PG
R
E
----
V
P
-----
A
L
----
R
N
I
N
L
K
I
P
A
G
K
T
V
A
L
V
G
R
S
G
S
G
K
S
T
I
A
S
L
I
T
R
F
Y
D
I
D
E
G
H
I
L
M
D
G
H
D
L
----
R
--
E
--
Y
T
L
A
---
S
L
-
R
N
----
Q
V
A
L
V
S
Q
N
V
H
---
L
F
N
D
-
T
V
A
N
N
I
A
Y
A
------------------
R
---
T
---
E
E
Y
S
R
E
Q
I
E
E
A
A
R
M
A
Y
A
M
-
D
----
F
I
N
K
-----------
M
D
N
G
L
D
T
I
I
G
ENGVLL
S
G
G
Q
R
Q
R
I
A
I
A
R
A
L
L
R
------
D
S
P
I
L
I
L
D
E
A
T
S
A
L
D
T
E
S
E
R
A
I
Q
A
A
L
D
E
L
Q
K
N
---
R
T
S
L
V
I
A
H
R
L
S
T
-
I
E
Q
A
D
E
I
V
V
V
E
D
G
I
I
V
E
R
G
T
H
S
E
L
L
A
Q
H
-----------------------
G
V
Y
A
Q
L
H
K
M
Q
FG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
PsiBlast_CBE
77.90
33%
-124
- C1 -
1L2T
4
Y796_METJA
B:
[2-226]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
K
L
K
N
V
T
K
T
Y
--
K
M
----
G
E
-----
E
I
IYAL
K
N
V
N
L
N
I
K
E
G
E
F
V
S
I
M
G
P
S
G
S
G
K
S
T
M
L
N
I
I
G
C
L
D
K
P
T
E
G
E
V
Y
I
D
N
I
K
T
----
N
--
D
--
L
D
D
D
---
E
L
-
T
K
IRRD
K
I
G
F
V
F
Q
Q
F
N
---
L
I
P
L
L
T
A
L
E
N
V
E
-----
L
P
L
I
F
------
K
Y
R
G
A
---
M
---
S
G
E
E
R
R
K
--
R
A
L
E
C
L
K
M
A
-
E
LEER
F
A
N
H
-----------
K
P
N
Q
L
-----------
S
G
G
Q
Q
Q
R
V
A
I
A
R
A
L
A
N
------
N
P
P
I
I
L
A
D
Q
P
T
G
A
L
D
S
K
T
G
E
K
I
M
Q
L
L
K
K
L
N
E
E
-
D
G
K
T
V
V
V
V
T
H
D
I
N
V
-
A
R
F
G
E
R
I
I
Y
L
K
D
G
E
V
E
R
E
E
K
L
R
G
F
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
73.68
33%
-117
- C1 -
1L2T
4
Y796_METJA
A:
[2-226]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
K
L
K
N
V
T
K
T
Y
--
K
M
----
G
E
-----
E
I
I
Y
AL
K
N
V
N
L
N
I
K
E
G
E
F
V
S
I
M
G
P
S
G
S
G
K
S
T
M
L
N
I
I
G
C
L
D
K
P
T
E
G
E
V
Y
I
D
N
I
K
T
----
N
--
D
--
L
D
D
D
---
E
L
-
T
K
I
R
R
D
K
I
G
F
V
F
Q
Q
F
N
---
L
I
P
L
L
T
A
L
E
N
V
E
-----
L
P
L
I
F
------
K
Y
R
G
A
---
M
---
S
G
E
E
R
R
K
--
R
A
L
E
C
L
K
M
A
-
E
LEER
F
A
N
H
-----------
K
P
N
Q
L
-----------
S
G
G
Q
Q
Q
R
V
A
I
A
R
A
L
A
N
------
N
P
P
I
I
L
A
D
Q
P
T
G
A
L
D
S
K
T
G
E
K
I
M
Q
L
L
K
K
L
N
E
E
-
D
G
K
T
V
V
V
V
T
H
D
I
N
V
-
A
R
F
G
E
R
I
I
Y
L
K
D
G
E
V
E
R
E
E
K
L
R
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
PsiBlast_CBE
72.69
31%
-113
- C1 -
4MKI
4
ECFA2_CALS4
A:
[7-236]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
K
V
E
N
V
S
F
I
Y
--
N
E
----
G
T
PYATV
A
L
----
K
D
I
N
F
S
I
D
D
E
E
F
V
G
I
I
G
H
T
G
S
G
K
S
T
L
I
Q
Q
L
N
G
L
L
K
P
S
K
G
K
I
Y
I
N
G
I
D
I
----
T
DK
K
--
V
S
L
K
---
D
I
-
R
K
----
Q
V
G
L
V
F
Q
Y
P
E
YQL
F
E
E
--
T
V
F
K
D
I
A
F
G
----
P
S
-
N
--------
L
G
L
---
S
---
E
E
E
V
K
E
R
V
Y
E
A
M
E
I
V
G
I
S
K
E
----
L
A
D
K
-----------
S
P
F
E
L
-----------
S
G
G
Q
K
R
R
V
A
I
A
G
I
L
A
M
------
R
P
K
I
L
I
L
D
E
P
T
A
G
L
D
P
K
G
K
Q
E
I
L
N
K
I
K
E
I
H
D
K
-
Y
K
M
I
T
I
L
V
S
H
N
M
E
D
I
A
R
I
A
D
K
I
I
V
M
N
R
G
K
I
E
L
I
G
T
P
R
E
V
F
R
E
A
E
R
L
E
K
I
G
L
S
V
P
Q
I
T
S
L
A
R
E
L
R
K
R
G
V
P
I
P
P
D
V
L
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
72.13
32%
-116
- C1 -
3TIF
7
Y796_METJA
A:
[2-226]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
K
L
K
N
V
T
K
T
Y
--
K
M
----
G
E
-----
E
I
I
Y
AL
K
N
V
N
L
N
I
K
E
G
E
F
V
S
I
M
G
P
S
G
S
G
K
S
T
M
L
N
I
I
G
C
L
D
K
P
T
E
G
E
V
Y
I
D
N
I
K
T
----
N
--
D
--
L
D
D
D
---
E
L
-
T
K
I
R
R
D
K
I
G
F
V
F
Q
Q
F
N
---
L
I
P
L
L
T
A
L
E
N
V
E
-----
L
P
L
I
F
------
K
Y
R
G
A
---
M
---
S
G
E
E
R
R
K
--
R
A
L
E
C
L
K
M
A
-
E
LEER
F
A
N
H
-----------
K
P
N
Q
L
-----------
S
G
G
Q
Q
Q
R
V
A
I
A
R
A
L
A
N
------
N
P
P
I
I
L
A
D
Q
P
T
W
A
L
D
S
K
T
G
E
K
I
M
Q
L
L
K
K
L
N
E
E
-
D
G
K
T
V
V
V
V
T
H
D
I
N
V
-
A
R
F
G
E
R
I
I
Y
L
K
D
G
E
V
E
R
E
E
K
L
R
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
70.96
31%
-114
- C1 -
4MKI
4
ECFA2_CALS4
B:
[7-236]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
K
V
E
N
V
S
F
I
Y
--
N
E
----
G
T
PYATV
A
L
----
K
D
I
N
F
S
I
D
D
E
E
F
V
G
I
I
G
H
T
G
S
G
K
S
T
L
I
Q
Q
L
N
G
L
L
K
P
S
K
G
K
I
Y
I
N
G
I
D
I
----
T
DK
K
--
V
S
L
K
---
D
I
-
R
K
----
Q
V
G
L
V
F
Q
Y
P
E
YQL
F
E
E
--
T
V
F
K
D
I
A
F
G
----
P
S
-
N
--------
L
G
L
---
S
---
E
E
E
V
K
E
R
V
Y
E
A
M
E
I
V
G
I
S
K
E
----
L
A
D
K
-----------
S
P
F
E
L
-----------
S
G
G
Q
K
R
R
V
A
I
A
G
I
L
A
M
------
R
P
K
I
L
I
L
D
E
P
T
A
G
L
D
P
K
G
K
Q
E
I
L
N
K
I
K
E
I
H
D
K
-
Y
K
M
I
T
I
L
V
S
H
N
M
E
D
I
A
R
I
A
D
K
I
I
V
M
N
R
G
K
I
E
L
I
G
T
P
R
E
V
F
R
E
A
E
R
L
E
K
I
G
L
S
V
P
Q
I
T
S
L
A
R
E
L
R
K
R
G
V
P
I
P
P
D
V
L
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
PsiBlast_CBE
70.61
32%
-126
- C1 -
3TIF
7
Y796_METJA
B:
[2-226]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
K
L
K
N
V
T
K
T
Y
--
K
M
----
G
E
-----
E
I
IYAL
K
N
V
N
L
N
I
K
E
G
E
F
V
S
I
M
G
P
S
G
S
G
K
S
T
M
L
N
I
I
G
C
L
D
K
P
T
E
G
E
V
Y
I
D
N
I
K
T
----
N
--
D
--
L
D
D
D
---
E
L
-
T
K
IRRD
K
I
G
F
V
F
Q
Q
F
N
---
L
I
P
L
L
T
A
L
E
N
V
E
-----
L
P
L
I
F
------
K
Y
R
G
A
---
M
---
S
G
E
E
R
R
K
--
R
A
L
E
C
L
K
M
A
-
E
LEER
F
A
N
H
-----------
K
P
N
Q
L
-----------
S
G
G
Q
Q
Q
R
V
A
I
A
R
A
L
A
N
------
N
P
P
I
I
L
A
D
Q
P
T
W
A
L
D
S
K
T
G
E
K
I
M
Q
L
L
K
K
L
N
E
E
-
D
G
K
T
V
V
V
V
T
H
D
I
N
V
-
A
R
F
G
E
R
I
I
Y
L
K
D
G
E
V
E
R
E
E
K
L
R
G
F
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
70.02
33%
-110
- C1 -
1F3O
2
Y796_METJA
A:
[2-226]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
K
L
K
N
V
T
K
T
Y
--
K
M
----
G
E
-----
E
I
IYAL
K
N
V
N
L
N
I
K
E
G
E
F
V
S
I
M
G
P
S
G
S
G
K
S
T
M
L
N
I
I
G
C
L
D
K
P
T
E
G
E
V
Y
I
D
N
I
K
T
----
N
--
D
--
L
D
D
D
---
E
L
-
T
K
I
R
R
D
K
I
G
F
V
F
Q
Q
F
N
---
L
I
P
L
L
T
A
L
E
N
V
E
-----
L
P
L
I
F
------
K
Y
R
G
A
---
M
---
S
G
E
E
R
R
K
--
R
A
L
E
C
L
K
M
A
-
E
LEER
F
A
N
H
-----------
K
P
N
Q
L
-----------
S
G
G
Q
Q
Q
R
V
A
I
A
R
A
L
A
N
------
N
P
P
I
I
L
A
D
E
P
T
G
A
L
D
S
K
T
G
E
K
I
M
Q
L
L
K
K
L
N
E
E
-
D
G
K
T
V
V
V
V
T
H
D
I
N
V
-
A
R
F
G
E
R
I
I
Y
L
K
D
G
E
V
E
R
E
E
K
L
R
G
F
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
69.56
33%
-105
- C1 -
3FVQ
3
FBPC_NEIG1
A:
[13-226]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
F
--
Q
N
----
T
P
-----
V
L
----
N
D
I
S
L
S
L
D
P
G
E
I
L
F
I
I
G
A
S
G
C
G
K
T
T
L
L
R
C
L
A
G
F
E
Q
P
D
S
G
E
I
S
L
S
G
K
T
I
FSKN
T
--
N
--
L
P
V
R
---
E
---
R
----
R
L
G
Y
L
V
Q
E
G
V
---
L
F
P
H
L
T
V
Y
R
N
I
A
Y
G
----------------
L
G
N
GKG
R
---
T
A
Q
E
R
Q
R
I
E
A
M
L
E
L
T
G
I
S
-
E
----
L
A
G
R
-----------
Y
P
H
E
L
-----------
S
G
G
Q
Q
Q
R
A
A
L
A
R
A
L
A
P
------
D
P
E
L
I
L
L
D
E
P
F
S
A
L
D
E
Q
L
R
R
Q
I
R
E
D
M
I
A
A
L
R
A
-
N
G
K
S
A
V
F
V
S
H
D
R
E
E
A
L
Q
Y
A
D
R
I
A
V
M
K
Q
G
R
I
L
Q
T
A
S
P
H
E
L
Y
R
Q
P
A
D
L
D
A
A
L
F
I
G
E
G
I
V
F
P
A
A
L
N
A
D
G
T
A
D
C
R
L
G
R
L
P
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
PsiBlast_CBE
69.38
33%
-106
- C1 -
3FVQ
3
FBPC_NEIG1
B:
[13-226]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
F
--
Q
N
----
T
P
-----
V
L
----
N
D
I
S
L
S
L
D
P
G
E
I
L
F
I
I
G
A
S
G
C
G
K
T
T
L
L
R
C
L
A
G
F
E
Q
P
D
S
G
E
I
S
L
S
G
K
T
I
FSKN
T
--
N
--
L
P
V
R
---
E
---
R
----
R
L
G
Y
L
V
Q
E
G
V
---
L
F
P
H
L
T
V
Y
R
N
I
A
Y
G
----------------
L
G
N
GKG
R
---
T
A
Q
E
R
Q
R
I
E
A
M
L
E
L
T
G
I
S
-
E
----
L
A
G
R
-----------
Y
P
H
E
L
-----------
S
G
G
Q
Q
Q
R
A
A
L
A
R
A
L
A
P
------
D
P
E
L
I
L
L
D
E
P
F
S
A
L
D
E
Q
L
R
R
Q
I
R
E
D
M
I
A
A
L
R
A
-
N
G
K
S
A
V
F
V
S
H
D
R
E
E
A
L
Q
Y
A
D
R
I
A
V
M
K
Q
G
R
I
L
Q
T
A
S
P
H
E
L
Y
R
Q
P
A
D
L
D
A
A
L
F
I
G
E
G
I
V
F
P
A
A
L
N
A
D
G
T
A
D
C
R
L
G
R
L
P
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
PsiBlast_CBE
67.09
32%
-103
- C1 -
2IT1
1
?
B:
[2-224]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
E
I
K
L
E
N
I
V
K
K
F
--
G
N
----
F
T
-----
A
L
----
N
N
I
N
L
K
I
K
D
G
E
F
M
A
L
L
G
P
S
G
S
G
K
S
T
L
L
Y
T
I
A
G
I
Y
K
P
T
S
G
K
I
Y
F
D
E
K
D
V
----
T
--
E
--
L
P
P
K
---
D
---
R
----
N
V
G
L
V
F
Q
N
W
A
---
L
Y
P
H
M
T
V
Y
K
N
I
A
-----
F
P
L
-
E
------
L
R
K
A
P
---
R
---
E
E
I
D
K
-
K
V
R
E
V
A
K
M
L
H
I
D
-
K
----
L
L
N
R
-----------
Y
P
W
Q
L
-----------
S
G
G
Q
Q
Q
R
V
A
I
A
R
A
L
V
K
------
E
P
E
V
L
L
L
D
E
P
L
S
N
L
D
A
L
L
R
L
E
V
R
A
E
L
K
R
L
Q
K
E
-
L
G
I
T
T
V
Y
V
T
H
D
Q
A
E
A
L
A
M
A
D
R
I
A
V
I
R
E
G
E
I
L
Q
V
G
T
P
D
E
V
Y
Y
K
P
K
Y
K
F
V
G
G
F
L
G
N
P
P
M
N
F
V
E
A
K
V
E
D
G
K
L
V
I
T
E
K
S
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48
Fugue
67.05
27%
-107
- C1 -
4F4C
3
PGP1_CAEEL
A:
[4-1306]
N
G
S
L
R
Q
S
L
R
T
L
D
S
F
SLA
P
E
D
V
L
K
T
A
I
K
T
V
E
D
Y
EGDNIDSNG
E
I
K
I
TRDEVV
N
K
V
S
I
P
Q
L
Y
RYTT
T
L
E
K
L
L
L
F
I
G
T
L
V
A
V
I
T
G
A
G
L
P
L
M
S
I
L
Q
G
K
V
S
Q
A
F
I
N
E
Q
I
V
I
N
N
N
G
S
T
F
LPTGQNYT
K
T
D
F
E
H
D
V
M
N
V
V
W
S
Y
A
A
M
T
V
G
M
W
A
A
G
Q
I
T
V
T
C
Y
L
Y
V
A
E
Q
M
N
N
R
L
R
R
E
F
V
K
S
I
L
R
QE
I
S
W
F
D
T
N
HSGT
L
A
T
K
L
F
D
N
L
E
R
V
K
E
G
T
GD
K
I
G
M
A
F
Q
Y
L
S
Q
F
I
T
G
F
I
V
A
F
T
H
S
W
Q
L
T
L
V
M
L
A
V
T
P
I
Q
A
L
C
G
F
A
I
A
K
S
M
S
T
F
A
I
R
E
T
L
R
Y
A
K
A
G
K
V
V
E
E
T
I
S
S
I
R
T
V
V
S
L
NG
L
R
Y
E
L
E
R
Y
S
T
A
V
E
E
A
K
K
A
G
V
L
K
G
L
F
L
G
I
S
F
G
A
M
Q
A
S
N
F
I
S
F
A
L
A
F
Y
I
G
V
G
W
V
H
D
GSLN
F
G
D
M
L
T
T
F
S
S
V
M
M
G
S
M
A
L
G
L
A
G
P
Q
L
A
V
L
G
T
A
Q
G
A
A
S
G
I
Y
E
V
LDRKPVIDSS
S
K
A
G
R
KDMKI
K
G
D
I
T
V
E
N
V
H
F
T
Y
--
P
S
----
R
P
DVP--
I
L
----
R
G
M
N
L
R
V
N
A
G
Q
T
V
A
L
V
G
S
S
G
C
G
K
S
T
I
I
S
L
L
L
R
Y
Y
D
V
L
K
G
K
I
T
I
D
G
V
D
V
----
R
--
D
--
I
N
L
E
---
F
L
-
R
K
----
N
V
A
V
V
S
Q
E
P
A
---
L
F
N
-
C
T
I
E
E
N
I
S
L
G
--
K
-----------------------
E
G
I
T
R
E
E
M
V
A
A
C
K
M
A
N
A
E
-
K
----
F
I
K
T
L
PNGYNTLVGD
R
G
T
Q
L
-----------
S
G
G
Q
K
Q
R
I
A
I
A
R
A
L
V
R
------
N
P
K
I
L
L
L
D
E
A
T
S
A
L
D
A
E
S
E
G
I
V
Q
Q
A
L
D
K
A
A
K
G
---
R
T
T
I
I
I
A
H
R
L
S
-
T
I
R
N
A
D
L
I
I
S
C
K
N
G
Q
V
V
E
V
G
D
H
R
A
L
M
A
Q
Q
----------
G
L
Y
Y
D
L
V
T
A
Q
T
F
T
D
A
V
D
S
A
A
E
G
E
R
I
G
K
D
A
L
S
R
L
K
Q
E
L
E
ENNAQKTN
L
F
E
I
L
Y
H
A
RPH
A
L
S
L
F
I
G
M
S
T
A
T
I
G
G
F
I
Y
P
T
Y
S
V
F
F
T
S
F
M
N
V
F
AGNPADFL
S
Q
G
H
F
W
A
L
M
F
L
V
L
A
A
A
Q
G
I
C
S
F
L
M
T
F
F
M
G
I
A
S
E
S
L
T
R
D
L
R
N
K
L
F
R
N
V
L
S
QHIGFFDSPQNA
S
G
K
I
S
T
R
L
A
T
D
V
P
N
L
R
T
A
I
D
F
R
F
S
T
V
I
T
T
L
V
S
M
V
A
G
I
G
L
A
F
F
Y
G
W
Q
M
A
L
L
I
I
A
I
L
P
I
V
A
F
G
Q
Y
L
R
G
RRFTGKNVKSA
S
E
F
A
D
S
G
K
I
A
I
E
A
I
E
N
V
R
T
V
Q
A
L
AR
E
D
T
F
Y
E
N
F
C
E
K
L
D
I
P
H
K
E
A
I
K
E
A
F
I
Q
G
L
S
Y
G
C
A
S
S
V
L
Y
L
L
N
T
C
A
Y
R
M
G
L
A
L
I
I
TDPPTMQ
P
M
R
V
L
R
V
M
Y
A
I
T
I
S
T
S
TLGFAT
S
Y
F
P
E
Y
A
K
A
T
F
A
G
G
I
I
F
G
M
L
R
KISKIDSLSLAGEKKKLYGK
V
I
F
K
N
V
R
F
A
Y
PERPEIEILK
G
L
S
F
S
V
E
PG
Q
T
L
A
L
V
G
P
S
GCGKST
V
V
A
L
L
E
RFYDTL
G
G
E
I
F
I
DGSEIKTLN
P
E
H
T
R
S
Q
I
A
I
V
S
Q
E
P
T
L
F
DCS
I
A
E
N
I
I
YGLDPSSVT
M
A
Q
V
E
E
A
A
R
L
A
NI
H
N
F
I
A
E
LPEGFETRVGDRGTQLS
G
G
Q
K
Q
R
I
A
I
A
R
A
L
V
R
NPK
I
L
L
L
D
EATSALDT
E
S
E
K
V
V
Q
E
A
L
D
R
A
R
EG
R
T
C
I
V
I
A
HRLNTVMNAD
C
I
A
V
V
S
NGTII
E
K
G
T
H
T
Q
L
M
S
E
K
42
HHSearch
66.24
27%
-109
- C1 -
2OLJ
4
?
A:
[22-251]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
Q
M
I
D
V
H
Q
L
K
K
S
F
--
G
S
----
L
E
-----
V
L
----
K
G
I
N
V
H
I
R
E
G
E
V
V
V
V
I
G
P
S
G
S
G
K
S
T
F
L
R
C
L
N
L
L
E
D
F
D
E
G
E
I
I
I
D
G
I
N
L
----
K
--
A
KD
T
N
L
N
---
K
V
-
R
E
----
E
V
G
M
V
F
Q
R
F
N
---
L
F
P
H
M
T
V
L
N
N
I
T
L
A
--
P
M
K
V
-
R
------
K
W
------
P
---
R
E
K
A
E
A
K
A
M
E
L
L
D
K
V
G
L
K
-
D
----
K
A
H
A
-----------
Y
P
D
S
L
-----------
S
G
G
Q
A
Q
R
V
A
I
A
R
A
L
A
M
------
E
P
K
I
M
L
F
D
E
P
T
S
A
L
D
P
E
M
V
G
E
V
L
S
V
M
K
Q
L
A
N
--
E
G
M
T
M
V
V
V
T
H
E
M
G
F
A
R
E
V
G
D
R
V
L
F
M
D
G
G
Y
I
I
E
E
G
K
P
E
D
L
F
D
R
P
Q
H
E
R
T
K
A
F
L
S
K
V
F
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
66.16
32%
-100
- C1 -
2IT1
-
?
A:
[1-224]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
V
E
I
K
L
E
N
I
V
K
K
F
--
G
N
----
F
T
-----
A
L
----
N
N
I
N
L
K
I
K
D
G
E
F
M
A
L
L
G
P
S
G
S
G
K
S
T
L
L
Y
T
I
A
G
I
Y
K
P
T
S
G
K
I
Y
F
D
E
K
D
V
----
T
--
E
--
L
P
P
K
---
D
---
R
----
N
V
G
L
V
F
Q
N
W
A
---
L
Y
P
H
M
T
V
Y
K
N
I
A
-----
F
P
L
-
E
------
L
R
K
A
P
---
R
---
E
E
I
D
K
-
K
V
R
E
V
A
K
M
L
H
I
D
-
K
----
L
L
N
R
-----------
Y
P
W
Q
L
-----------
S
G
G
Q
Q
Q
R
V
A
I
A
R
A
L
V
K
------
E
P
E
V
L
L
L
D
E
P
L
S
N
L
D
A
L
L
R
L
E
V
R
A
E
L
K
R
L
Q
K
E
-
L
G
I
T
T
V
Y
V
T
H
D
Q
A
E
A
L
A
M
A
D
R
I
A
V
I
R
E
G
E
I
L
Q
V
G
T
P
D
E
V
Y
Y
K
P
K
Y
K
F
V
G
G
F
L
G
N
P
P
M
N
F
V
E
A
K
V
E
D
G
K
L
V
I
T
E
K
S
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
46
HHSearch
66.07
25%
-112
- C1 -
1G6H
3
LIVG_METJA
A:
[5-243]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
E
I
L
R
T
E
N
I
V
K
Y
F
--
G
E
----
F
K
-----
A
L
----
D
G
V
S
I
S
V
N
K
G
D
V
T
L
I
I
G
P
N
G
S
G
K
S
T
L
I
N
V
I
T
G
F
L
K
A
D
E
G
R
V
Y
F
E
N
K
D
I
----
T
--
N
--
K
E
P
A
---
E
L
Y
H
Y
----
G
I
V
R
T
F
Q
T
P
Q
---
P
L
K
E
M
T
V
L
E
N
L
L
I
G
--
E
I
C
P
-
G
ES
P
L
N
S
L
F
Y
K
K
---
W
IPK
E
E
E
M
V
E
K
A
F
K
I
L
E
F
L
K
L
S
-
H
----
L
Y
D
R
-----------
K
A
G
E
L
-----------
S
G
G
Q
M
K
L
V
E
I
G
R
A
L
M
T
------
N
P
K
M
I
V
M
D
E
P
I
A
G
V
A
P
G
L
A
H
D
I
F
N
H
V
L
E
L
K
A
--
K
G
I
T
F
L
I
I
E
H
R
L
D
I
V
L
N
Y
I
D
H
L
Y
V
M
F
N
G
Q
I
I
A
E
G
R
G
E
E
E
I
K
N
V
L
S
D
P
K
V
V
E
I
Y
I
G
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34
HHSearch
65.38
25%
-112
* C1 *
3TUI
1
METN_ECOLI
C:
[23-254]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
M
I
K
L
S
N
I
T
K
V
F
--
H
Q
GTRT
I
Q
-----
A
L
----
N
N
V
S
L
H
V
P
A
G
Q
I
Y
G
V
I
G
A
S
G
A
G
K
S
T
L
I
R
C
V
N
L
L
E
R
P
T
E
G
S
V
L
V
D
G
Q
E
L
----
T
--
T
--
L
S
E
S
ELT
K
A
-
R
R
----
Q
I
G
M
I
F
Q
H
F
N
---
L
L
S
S
R
T
V
F
G
N
V
A
L
P
--
L
E
L
D
-
N
----------
T
---
P
---
K
D
E
V
K
R
R
V
T
E
L
L
S
L
V
G
L
G
-
D
----
K
H
D
S
-----------
Y
P
S
N
L
-----------
S
G
G
Q
K
Q
R
V
A
I
A
R
A
L
A
S
------
N
P
K
V
L
L
C
D
Q
A
T
S
A
L
D
P
A
T
T
R
S
I
L
E
L
L
K
D
I
N
R
R
-
L
G
L
T
I
L
L
I
T
H
E
M
D
V
V
K
R
I
C
D
C
V
A
V
I
S
N
G
E
L
I
E
Q
D
T
V
S
E
V
F
S
H
P
K
T
P
L
A
Q
K
F
I
Q
S
T
L
H
L
D
I
P
E
D
Y
Q
E
R
L
Q
A
E
P
F
T
D
C
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
64.82
28%
-107
- C1 -
1V43
-
?
A:
[10-230]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
V
E
V
K
L
E
N
L
T
K
R
F
--
G
N
----
F
T
-----
A
V
----
N
K
L
N
L
T
I
K
D
G
E
F
L
V
L
L
G
P
S
G
C
G
K
T
T
T
L
R
M
I
A
G
L
E
E
P
T
E
G
R
I
Y
F
G
D
R
D
V
----
T
--
Y
--
L
P
P
K
---
D
---
R
----
N
I
S
M
V
F
Q
---------
H
M
T
V
Y
E
N
I
A
F
P
LK
K
F
P
K
---------------------
D
E
I
D
K
R
V
R
W
A
A
E
L
L
Q
I
E
-
E
----
L
L
N
R
-----------
Y
P
A
Q
L
-----------
S
G
G
Q
R
Q
R
V
A
V
A
R
A
I
V
V
------
E
P
D
V
L
L
M
D
E
P
L
S
N
L
D
A
K
L
R
V
A
M
R
A
E
I
K
K
L
Q
Q
K
-
L
K
V
T
T
I
Y
V
T
H
D
Q
V
E
A
M
T
M
G
D
R
I
A
V
M
N
R
G
Q
L
L
Q
I
G
S
P
T
E
V
Y
L
R
P
N
S
V
F
V
A
T
F
I
G
A
P
E
M
N
I
L
E
V
S
V
G
D
G
Y
L
E
G
R
G
F
R
I
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45
HHSearch
64.77
24%
-118
- C1 -
2IHY
1
?
A:
[20-262]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
L
I
Q
L
D
Q
I
G
R
M
K
--
Q
G
----
K
T
-----
I
L
----
K
K
I
S
W
Q
I
A
K
G
D
K
W
I
L
Y
G
L
N
G
A
G
K
T
T
L
L
N
I
L
N
A
Y
E
P
A
T
S
G
T
V
N
L
F
G
K
M
P
--------G-
Y
S
A
E
---
T
V
-
R
Q
----
H
I
G
F
V
S
H
S
L
L
E
K-
F
Q
E
G
E
R
V
I
D
V
V
I
S
G
--
A
-------------------
I
---
D
D
E
I
R
N
E
A
H
Q
L
L
K
L
V
G
M
S
-
A
----
K
A
Q
Q
-----------
Y
I
G
Y
L
-----------
S
T
G
E
K
Q
R
V
M
I
A
R
A
L
M
G
------
Q
P
Q
V
L
I
L
D
E
P
A
A
G
L
D
F
I
A
R
E
S
L
L
S
I
L
D
S
L
S
D
S
Y
P
T
L
A
M
I
Y
V
T
H
F
I
E
E
I
T
A
N
F
S
K
I
L
L
L
K
D
G
Q
S
I
Q
Q
G
A
V
E
D
I
L
T
S
E
N
M
S
R
F
F
Q
K
N
V
A
V
Q
R
W
N
N
R
F
S
M
A
M
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------