@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1560: (2015-12-08 )
MTFKSGFVAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTTETEQIVFIDTPGIHKPKTALGDFMVESAYSTLREVETVLFMVPADEKRGKGDDMIIERLKAAKIPVILVINKIDKVHPDQLLEQIDDFRSQMDFKEVVPISALQGNNVPTLIKLLTDNLEEGFQYFPEDQITDHPERFLVSEMVREKVLHLTQQEVPHSVAVVVESMKRDEETDKVHIRATIMVERDSQKGIIIGKQGAMLKKIGKMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYNEKEY

Atome Classification :

(20 SA) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.......-..10........20........30........40........50...-......60.-----.-.-..-..--.-----70.----.......80........90........100......-.110-........120....-...-130..---.....-.---140.-......150.......160.......170.......180........190.......200.......210.......-220-.......230.......240.......250.......260.......270.......280.......290.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTFKSGF-VAILGRPNVGKSTFLNHVMGQKIAIMSDKAQTTRNKIMGIYTT-ETE-QIVFIDTPG-----I-H-KP-KT--A-----LGD----FMVESAYSTLREVETVLFMVPADEKRGKGDDMIIER-LKA--AKIPVILVINKIDKV-HPD-Q-LLE---QIDDF-R---SQMD-FKEVVPISALQGNNVPTLIKLLTDNLEEGFQYFPEDQI-TDHPERFLVSEMVREKVLHLTQQEVPHSVAVVVESMKR-DEE-TDKVHIRATIMVERDSQKGIIIGKQGAMLKKIGKMARRDIELMLGDKVYLETWVKVKKNWRDKKLDLADFGYNEKEY
67 HHSearch 96.1047%-106 - C1 -3IEV ERA_AQUAE A:[7-307] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HMKVGY-VAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNEA-QIIFLDTPG-----I-Y-EP-KKSDV-----LGH----SMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKP--LNKPVIVVINKIDKI-GPA-KNVLP---LIDEI-H---KKHPELTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMI-TDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKP-GDANPNMLVIKGEIIVDRENLKPIIIGKKGQRLKEIGKRARQELELILGRPVYLELWVKVVPDWRRRPEYVRLFGYAL---
3 PsiBlast_PDB 95.5946%-108 - C1 -3IEV ERA_AQUAE A:[8-306] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKVGY-VAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNI-PNEAQIIFLDTPG-----I-Y-EP-KK--SDV---LGH----SMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKP--LNKPVIVVINKIDKI-GPA-KNVLP---LIDEIHK---KHPE-LTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMI-TDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDAN-PNMLVIKGEIIVDRENLKPIIIGKKGQRLKEIGKRARQELELILGRPVYLELWVKVVPDWRRRPEYVRLFGYAL---
2 PsiBlast_PDB 94.0746%-108 - C1 -3R9X ERA_AQUAE A:[7-305] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKVGY-VAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNI-PNEAQIIFLDTPG-----I-Y-EP-KK--SDV---LGH----SMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKP--LNKPVIVVINKIDKI-GPA-KNVLP---LIDEIHK---KHPE-LTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMI-TDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDAN-PNMLVIKGEIIVDRENLKPIIIGKKGQRLKEIGKRARQELELILGRPVYLELWVKVVPDWRRRPEYVRLFGYAL---
1 PsiBlast_PDB 93.7046%-111 - C1 -3R9W ERA_AQUAE A:[7-305] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKVGY-VAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNI-PNEAQIIFLDTPG-----I-Y-EP-KK--SDV---LGH----SMVEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKP--LNKPVIVVINKIDKI-GPA-KNVLP---LIDEIHK---KHPE-LTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMI-TDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDAN-PNMLVIKGEIIVDRENLKPIIIGKKGQRLKEIGKRARQELELILGRPVYLELWVKVVPDWRRRPEYVRLFGYAL---
6 PsiBlast_PDB 91.2043%-115 - C1 -3IEU ERA_ECOLI A:[8-296] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGF-IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTE-GAY-QAIYVDTPG-----L-HMEE-KR--A-----INR----LMNKAASSSIGDVELVIFVVEGT-RWTPDDEMVLNK-LRE--GKAPVILAVNKVDNV-QEK-ADLLP---HLQFL-A---SQMN-FLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYI-TDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVS-NER-GG-YDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLG------
22 PsiBlast_CBE 90.7843%-116 - C1 -1EGA ERA_ECOLI B:[8-296] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGF-IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTE-GAY-QAIYVDTPG-----L-HMEE-KR--A-----INR----LMNKAASSSIGDVELVIFVVEGT-RWTPDDEMVLNK-LRE--GKAPVILAVNKVDNV-QEK-ADLLP---HLQFL-A---SQMN-FLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYI-TDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVS-NER-GG-YDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLG------
21 PsiBlast_CBE 90.6543%-114 - C1 -3IEU ERA_ECOLI B:[8-296] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGF-IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTE-GAY-QAIYVDTPG-----L-HMEE-KR--A-----INR----LMNKAASSSIGDVELVIFVVEGT-RWTPDDEMVLNK-LRE--GKAPVILAVNKVDNV-QEK-ADLLP---HLQFL-A---SQMN-FLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYI-TDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVS-NER-GG-YDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSLG------
4 PsiBlast_PDB 89.3743%-111 - C1 -1EGA ERA_ECOLI A:[8-295] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CGF-IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTE-GAY-QAIYVDTPG-----L-HMEE-KR--A-----INR----LMNKAASSSIGDVELVIFVVEGT-RWTPDDEMVLNK-LRE--GKAPVILAVNKVDNV-QEK-ADLLP---HLQFL-A---SQMN-FLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYI-TDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVS-NER-GG-YDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSL-------
65 HHSearch 88.7143%-108 - C1 -1EGA ERA_ECOLI A:[5-295] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KSYCGF-IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTE-GAY-QAIYVDTPG-----L-H-ME-EKR-A-----INR----LMNKAASSSIGDVELVIFVVEGTRW-TPDDEMVLNK-LRE--GKAPVILAVNKVDNV-QEKAD-LLP---HLQFL-A---SQMN-FLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYI-TDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVS-NE--RGGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSL-------
8 PsiBlast_PDB 86.6538% -96 - C1 -1WF3 ERA_THET8 A:[7-297] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SGF-VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTE-GRR-QIVFVDTPG-----L-H-KP-MD--A-----LGE----FMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARA-LKPLVGKVPILLVGNKLDAAKYPE-E-AMK---AYHEL-L---PEAE-PRM---LSALDERQVAELKADLLALMPEGPFFYPEDYAKSDQTFGEWVAEILREEAMKRLWHEVPYAVATKVEEVA--ERE-NGVLYIKAILYVERPSQKAIVIGEGGRKIKEIGQATRKQLEALLGKKVYLDLEVKVYPDWRKDPEALRELGYRS---
66 HHSearch 86.3939% -90 - C1 -1WF3 ERA_THET8 A:[4-298] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KTYSGF-VAIVGKPNVGKSTLLNNLLGVKVAPISPRPQTTRKRLRGILTE-GRR-QIVFVDTPG-----L-H-KP-MD--A-----LGE----FMDQEVYEALADVNAVVWVVDLRHPPTPEDELVARA-LKPLVGKVPILLVGNKLDAA-KYP-E---E---AMKAY-H---ELLP-EAEPRMLSALDERQVAELKADLLALMPEGPFFYPEDYAKSDQTFGEWVAEILREEAMKRLWHEVPYAVATKVEEVAE-RE--NGVLYIKAILYVERPSQKAIVIGEGGRKIKEIGQATRKQLEALLGKKVYLDLEVKVYPDWRKDPEALRELGYRS---
55 Fugue 67.7544%-111 - C1 -1EGA ERA_ECOLI A:[4-182] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DKSYCGF-IAIVGRPNVGKSTLLNKLLGQKISITSRKAQTTRHRIVGIHTE-GAY-QAIYVDTPG-----LHM-EE-KR--A-----INR----LMNKAASSSIGDVELVIFVVEGTRW-TPDDEMVLNK-LRE--GKAPVILAVNKVDNVQEKA-D-LLP---HLQFL-A---SQMN-FLDIVPISAETGLNVDTIAAIVRKHLPEATHHFPEDYI-TDRSQRFMASEIIREKLMRFLGAELPYSVTVEIERFVS-NER-GGYDINGLILVEREGQKKMVIGNKGAKIKTIGIEARKDMQEMFEAPVHLELWVKVKSGWADDERALRSL--------
17 PsiBlast_PDB 67.3728%-128 - C1 -3PR1 ENGB_THEMA A:[24-193] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GE-VAFVGRSNVGKSSLLNALFN-------------RS--INFYLV-NS--KYYFVDLPGY---------K-ER--M-----LWK----RLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEW-MKS--LNIPFTIVLTKMDKV-KMS-E-RAK---KLEEH-RKVFSKYG-EYTIIPTSSVTGEGISELLDLISTLLK------------------------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 66.4828%-119 - C1 -3PQC ENGB_THEMA A:[24-193] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GE-VAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKTRS--INFYLV-NS--KYYFVDLPGYGYAKV-S-KK-ER--M-----LWK----RLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEW-MKS--LNIPFTIVLTKMDKV-KMS-E-RAK---KLEEH-RKVFSKYG-EYTIIPTSSVTGEGISELLDLISTLLK------------------------------------------------------------------------------------------------------------------------------------
23 PsiBlast_CBE 65.3231%-131 - C1 -4KYU DER_BACSU B:[6-163] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAIVGRPNVGKSTIFNRIA-----------------IYSSAEW--NY-DFNLIDTGG-----I-D-IG-DE--P-----FLA----QIRQQAEIAMDEADVIIFMVNGREGVTAADEEVAKI-LYR--TKKPVVLAVNKLDNT-----E-MRA---NIYDF-Y---S-LG-FGEPYPISGTHGLGLGDLLDAVAEHF-------------------------------------------------------------------------------------------------------------------------------------
82 HHSearch 64.0028%-103 - C1 -3PQC ENGB_THEMA A:[21-193] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PLKGE-VAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKTRSIN---FYL-VNS-KYYFVDLPG-----Y-G-YA-KV--SKKERMLWK----RLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEW-MKS--LNIPFTIVLTKMDKV-KMS-E-RAKKLEEHRKV-F---SKYG-EYTIIPTSSVTGEGISELLDLISTLLK------------------------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 62.4431%-113 - C1 -4KYU DER_BACSU A:[6-163] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VAIVGRPNVGKSTIFNRIAGERI----------RDRIYSSAEW-LNY-DFNLIDTGG-----I-D-IG-DE--P-----FLA----QIRQQAEIAMDEADVIIFMVNGREGVTAADEEVAKI-LYR--TKKPVVLAVNKLDNT-----E-MRA---NIYDF-Y---S-LG-FGEPYPISGTHGLGLGDLLDAVAEHF-------------------------------------------------------------------------------------------------------------------------------------
86 HHSearch 61.5727%-104 - C1 -2DYK ? A:[2-160] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------HK-VVIVGRPNVGKSSLFNRLLKKRS-----------DLKEGVVET-DRG-RFLLVDTGG-----L-W-SG-DK--W------EK----KIQEKVDRALEDAEVVLFAVDGRAELTQADYEVAEY-LRR--KGKPVILVATKVDDP-KHE-L-YLG---PL--------YGLG-FGDPIPTSSEHARGLEELLEAIWERLP------------------------------------------------------------------------------------------------------------------------------------
57 Fugue 61.0724% -82 - C1 -1XZP MNME_THEMA A:[27-482] SSVDKLMDTIVAVATPPGKGAIAILRLSGPDSWKIVQKHLRTRSKIVPRKAIHGWIHENGEDVDEVVVVFYKSPKSYTGEDMVEVMCHGGPLVVKKLLDLFLKSGARMAEPGEFTKRAFLNGKMDLTSAEAVRDLIEAKSETSLKLSLRNLKGGLRDFVDSLRRELIEVLAEIRVELDYPDEIETNTGEVVTRLERIKEKLTEELKKADAGILLNRGLRMVIVGKPNVGKSTLLNRLLNEDRAIVTDIPGTTRDVISEEIVI-RGI-LFRIVDTAG-----V-R-SETND--L-----VER----LGIERTLQEIEKADIVLFVLDASSPLDEEDRKILER-IKN--K--RYLVVINKVDVV-EKI-N-EEE---IKNKL-G---TD----RHMVKISALKGEGLEKLEESIYRETQEIFERGSDSLI-TN---------------------------------------L-RQKQLLENVKGHLEDAIKSLKEGMPVDMASIDLERALNLLDEVTGRSFREDLLDTIFSNFCVGK-------------
18 PsiBlast_PDB 60.9027%-109 - C1 -2DYK ? A:[4-160] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VVIVGRPNVGKSSLFNRLLKKRS-----------DLKEGVVET-DRG-RFLLVDTGG-----L-W-S-------------GDKWEKKIQEKVDRALEDAEVVLFAVDGRAELTQADYEVAEY-LRR--KGKPVILVATKVDDP-KHE-L-YLG---PL--------YGLG-FGDPIPTSSEHARGLEELLEAIWERLP------------------------------------------------------------------------------------------------------------------------------------