@TOME V2.3
(Nov 2016)

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3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1667: (2015-12-09 )
MVLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEWLNRKFSLIDTGGIDDVDAPFMEQIKHQADIAMTEADVIVFVVSGKEGVTDADEYVSLILYKTNKPVILAVNKVDNPEMRNDIYDFYSLGLGDPYPLSSVHGIGTGDILDAIVENLPVEEENENPDIIRFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTNFVDSQGQEYTMIDTAGMRKSGKVYENTEKYSVMRSMRAIDRSDVVLMVINAEEGIREYDKRIAGFAHEAGKGIIIVVNKWDTIEKDSHTVSQWEADIRDNFQFLSYAPIIFVSAETKQRLHKLPDMIKRISESQNKRIPSAVLNDVIMDAIAINPTPTDKGKRLKIFYATQVAVKPPTFVVFVNEEELMHFSYLRFLENQIREAFVFEGTPINLIARKRK

Atome Classification :

(20 SA) .........10........20........30........40.......-.50-........60-----......--..70.......-.80........90........100...-....110........120.--.-----...--..130---....-.-...140.......150.......160..-----...-----..170.......180.......190.......200.......210....-...220.......230.......240.....--..250.......260.......270.......280........290.......300.......310.......320.......330.......340.......350.......360----......-------..370.......380.......390.......400.--------......410-........-420.-......430....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MVLPTVAIVGRPNVGKSTLFNRIAGERISIVEDVEGVTRDRIYTTGEW-LNR-KFSLIDTGGI-----DDVDAP--FMEQIKHQADI-AMTEADVIVFVVSGKEGVTDADEYVSL-ILYKT-NKPVILAVNKVDN--P-----EMR--NDIY----DFYS-L-GLGDPYPLSSVHGIGTGDILDAIVENLP-----VEE-----ENENPDIIRFSLIGRPNVGKSSLINAILGEDRVIASPVAGTTRDAIDTN-FVDSQGQEYTMIDTAGMRKSGKVYENTEKYS--VMRSMRAIDRSDVVLMVINAEEGIREYDKRIAGF-AHEAGKGIIIVVNKWDTIEKDSHTVSQWEADIRDNFQFLSYAPIIFVSAETKQRLHKLPDMIKRISESQNKRIPSAVLND-----VIMDAI-------AINPTPTDKGKRLKIFYATQVAVKPPTFVVFVNEEE--------LMHFSYLR--FLENQIRE-AFVF-EGTPINLIARKRK
3 PsiBlast_PDB 98.2367%-119 - C1 -4DCV DER_BACSU A:[23-456] --KPVVAIVGRPNVGKSTIFNRIAGERIS-----------RIYSSAEW-LNY-DFNLIDTGG-----------P--FLAQIRQQAEI-AMDEADVIIFMVNGREGVTAADEEVAK-ILYRT-KKPVVLAVNKL------------------Y----DFYS-L-GFGEPYPISGTHGLGLGDLLDAVAEHFKN----IPE-----TKYNEEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSN------DAVDTS-FTYNQ-QEFVIVDTAGMRKKGKVYETTEKYS--VLRALKAIDRSEVVAVVLDGEEGIIEQDKRIAGY-AHEAGKAVVIVVNKWDAVDKDESTMKEFEENIRDHFQFLDYAPILFMSALTKKRIHTLMPAIIKASENHSLRVQTNVLND-----VIMDAV-------AMNPTPTHNGSRLKIYYATQVSVKPPSFVVFVNDPE--------LMHFSYER--FLENRIRD-AFGF-EGTPIKIFARARK
1 PsiBlast_PDB 97.9867%-119 - C1 -4DCS DER_BACSU A:[23-455] --KPVVAIVGRPNVGKSTIFNRIAGERIS-----------RIYSSAEW-LNY-DFNLIDTGG-----------P--FLAQIRQQAEI-AMDEADVIIFMVNGREGVTAADEEVAK-ILYRT-KKPVVLAVNKL-----------MR--ANIY----DFYS-L-GFGEPYPISGTHGLGLGDLLDAVAEHFKN----IPE-----TKYNEEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSN------DAVDTS-FTYNQ-QEFVIVDTAGMRKKGKVYETTEKYS--VLRALKAIDRSEVVAVVLDGEEGIIEQDKRIAGY-AHEAGKAVVIVVNKWDAVDKDESTMKEFEENIRDHFQFLDYAPILFMSALTKKRIHTLMPAIIKASENHSLRVQTNVLND-----VIMDAV-------AMNPTPTHNGSRLKIYYATQVSVKPPSFVVFVNDPE--------LMHFSYER--FLENRIRD-AFGF-EGTPIKIFARAR-
2 PsiBlast_PDB 97.3167%-119 - C1 -4DCU DER_BACSU A:[23-454] --KPVVAIVGRPNVGKSTIFNRIAGERIS-----------RIYSSAEW-LNY-DFNLIDTGG-----------P--FLAQIRQQAEI-AMDEADVIIFMVNGREGVTAADEEVAK-ILYRT-KKPVVLAVNKL------------------Y----DFYS-L-GFGEPYPISGTHGLGLGDLLDAVAEHFKN----IPE-----TKYNEEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSN------DAVDTS-FTYNQ-QEFVIVDTAGMRKKGKVYETTEKYS--VLRALKAIDRSEVVAVVLDGEEGIIEQDKRIAGY-AHEAGKAVVIVVNKWDAVDKDESTMKEFEENIRDHFQFLDYAPILFMSALTKKRIHTLMPAIIKASENHSLRVQTNVLND-----VIMDAV-------AMNPTPTHNGSRLKIYYATQVSVKPPSFVVFVNDPE--------LMHFSYER--FLENRIRD-AFGF-EGTPIKIFARA--
4 PsiBlast_PDB 96.8666%-118 - C1 -2HJG DER_BACSU A:[4-436] ---PVVAIVGRPNVGKSTIFNRIAGERIS-----------RIYSSAEW-LNY-DFNLID--------------P--FLAQIRQQAEI-AMDEADVIIFMVNGREGVTAADEEVAK-ILYRT-KKPVVLAVNKLDN--------------NIY----DFYS-L-GFGEPYPISGTHGLGLGDLLDAVAEHFKN----IPE-----TKYNEEVIQFCLIGRPNVGKSSLVNAMLGEERVIVS---------VDTS-FTYNQ-QEFVIVDTAGMRKKGKVYETTEKYS--VLRALKAIDRSEVVAVVLDGEEGIIEQDKRIAGY-AHEAGKAVVIVVNKWDAVDKDESTMKEFEENIRDHFQFLDYAPILFMSALTKKRIHTLMPAIIKASENHSLRVQTNVLND-----VIMDAV-------AMNPTPTHNGSRLKIYYATQVSVKPPSFVVFVNDPE--------LMHFSYER--FLENRIRD-AFGF-EGTPIKIFARARK
5 PsiBlast_PDB 78.9538%-113 - C1 -1MKY DER_THEMA A:[3-433] ----TVLIVGRPNVGKSTLFNKLVK--------------DPVQDTVEW-YGK-TFKLVDTCGV-----FDNPQD--IISQKMKEVTLNMIREADLVLFVVDGKRGITKEDESLAD-FLRKS-TVDTILVANKAENL-R-----EFE--REVKP---ELYS-L-GFGEPIPVSAEHNINLDTMLETIIKKLEEKGLDLES-----KPEITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIP------VDDEVFID--GRKYVFVDTAGL----------EKYS--NYRVVDSIEKADVVVIVLDATQGITRQDQRMAGL-MERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMIDAMNLAYASYTTKVPSSAINS-----ALQKVL-------AFTNLP----RGLKIFFGVQVDIKPPTFLFFVNSIE--------KVKNPQKI--FLRKLIRDYVFPF-EGSPIFLKFKRSR
56 HHSearch 78.5738%-105 - C1 -1MKY DER_THEMA A:[2-439] ---ATVLIVGRPNVGKSTLFNKLVK--------------DPVQDTVEW-YGK-TFKLVDTCGV-----FDNPQDI-ISQKMKEVTLN-MIREADLVLFVVDGKRGITKEDESLAD-FLRKS-TVDTILVANKAEN--L-----REFEREVKP----ELYS-L-GFGEPIPVSAEHNINLDTMLETIIKKLE-----EKGLDLESKPEITDAIKVAIVGRPNVGKSTLFNAILNKERALVSPIP------VDDE-VFI-DGRKYVFVDTAGL----------EKYS--NYRVVDSIEKADVVVIVLDATQGITRQDQRMAGL-MERRGRASVVVFNKWDLVVHREKRYDEFTKLFREKLYFIDYSPLIFTSADKGWNIDRMIDAMNLAYASYTTKVPSSAINS-----ALQKVL-------AFTNLPR----GLKIFFGVQVDIKPPTFLFFVNSIE--------KVKNPQKI--FLRKLIRDYVFPF-EGSPIFLKFKRSR
21 PsiBlast_CBE 67.1070%-111 - C1 -4KYU DER_BACSU B:[3-163] --KPVVAIVGRPNVGKSTIFNRIA-----------------IYSSAEW--NY-DFNLIDTGGI-----DIGDEP--FLAQIRQQAEI-AMDEADVIIFMVNGREGVTAADEEVAK-ILYRT-KKPVVLAVNKLDN--T-----EMR--ANIY----DFYS-L-GFGEPYPISGTHGLGLGDLLDAVAEHF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 PsiBlast_PDB 61.6270% -95 - C1 -4KYU DER_BACSU A:[2-163] -GKPVVAIVGRPNVGKSTIFNRIAGERI----------RDRIYSSAEW-LNY-DFNLIDTGGI-----DIGDEP--FLAQIRQQAEI-AMDEADVIIFMVNGREGVTAADEEVAK-ILYRT-KKPVVLAVNKLDN--T-----EMR--ANIY----DFYS-L-GFGEPYPISGTHGLGLGDLLDAVAEHF-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
62 HHSearch 58.1144% -83 - C1 -2DYK ? A:[1-160] --MHKVVIVGRPNVGKSSLFNRLLKKRS-----------DLKEGVVET-DRG-RFLLVDTGGL-----WSGDK---WEKKIQEKVDR-ALEDAEVVLFAVDGRAELTQADYEVAE-YLRRK-GKPVILVATKVDD--P-----KHE--LYLG----PLYG-L-GFGDPIPTSSEHARGLEELLEAIWERLP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 57.6744% -85 - C1 -2DYK ? A:[4-161] -----VVIVGRPNVGKSSLFNRLLKKRS-----------DLKEGVVET-DRG-RFLLVDTGGL-----WSGDK---WEKKIQEKVDR-ALEDAEVVLFAVDGRAELTQADYEVAE-YLRRK-GKPVILVATKVDD--P-----KHE--LYLG----PLYG-L-GFGDPIPTSSEHARGLEELLEAIWERLP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 PsiBlast_CBE 57.4644% -88 - C1 -2DYK ? B:[4-161] -----VVIVGRPNVGKSSLFNRLLKKRS-----------DLKEGVVET-DRG-RFLLVDTGGL-----WSGDK---WEKKIQEKVDR-ALEDAEVVLFAVDGRAELTQADYEVAE-YLRRK-GKPVILVATKVDD--P-----KHE--LYLG----PLYG-L-GFGDPIPTSSEHARGLEELLEAIWERLP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 53.8934%-102 - C1 -3IEV ERA_AQUAE A:[13-181] -----VAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNI-PNEAQIIFLDTPGIYEPKKSDVLGH--SMVEIAKQ----SLEEADVILFMIDATEGWRPRDEEIYQ-NFIKPLNKPVIVVINKIDKIGPAKNVLPLI--DEIH----KKHP---ELTEIVPISALKGANLDELVKTILKYLP-----EGE-----PLFPEDMITDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDA-NPNMLVIKGEIIVDRENLKPIIIGKKGQRLK--EIGKRARQELELILGRPVYLELWVKVVPDWRRRP-EYVRLFGYAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 53.8134%-105 - C1 -3R9W ERA_AQUAE A:[12-180] -----VAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNI-PNEAQIIFLDTPGIYEPKKSDVLGH--SMVEIAKQ----SLEEADVILFMIDATEGWRPRDEEIYQ-NFIKPLNKPVIVVINKIDKIGPAKNVLPLI--DEIH----KKHP---ELTEIVPISALKGANLDELVKTILKYLP-----EGE-----PLFPEDMITDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDA-NPNMLVIKGEIIVDRENLKPIIIGKKGQRLK--EIGKRARQELELILGRPVYLELWVKVVPDWRRRP-EYVRLFGYAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
57 HHSearch 53.7424% -82 - C1 -3IEV ERA_AQUAE A:[8-288] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKVGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGV-KNIPNEAQIIFLDTPGIYEPKKSD-VLGHSM--VEIAKQSLEEADVILFMIDATEGWRPRDEEIYQNFIKPLNKPVIVVINKIDKIGPAKN-VLPLIDEIHKKHP--ELTEIVPISALKGANLDELVKTILKYLPEGEPLFPEDMITDLPLRLLAAEIVREKAMMLTREEVPT--SIAVKINEIKPGDANPNMLVIKGEIIVDRENLKPIIIGKKGQRLKEIGKRARQ-ELELILGRPVYLELWVKV
67 HHSearch 52.9534%-114 - C1 -3GEH MNME_NOSS1 A:[222-385] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RTGLKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQ-LVV-GGIPVQVLD-------------------------QAANTADLVLLTIDAATGWTTGDQEIYEQ-V--KHRPLILVMNKIDLVEKQL--ITS----LE---YPENITQIVHTAAAQKQGIDSLETAILEIVQTGKVQAADMDLAI-----NQRQAA-------ALTQAKMSLEQVQATITQQLPLDFWTIDLRGAIQAL--------GEITGEEV--TESVLDRI-FSRF-CIGK---------
75 HHSearch 52.2921% -93 - C1 -3PQC ENGB_THEMA A:[19-193] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PPPLKGEVAFVGRSNVGKSSLLNALFNRKIAFVSKTPGKTRSIN----FYL-VNSKYYFVDLPGYGYAKVSKKERMLWKRLVEDYFKNRWSLQMVFLLVDGRIPPQDSDLMMVEW-MKSLNIPFTIVLTKMDKVKMSE--RAKKLEEHRKVFSKYGEYTIIPTSSVTGEGISELLDLISTLLK----------------------------------------------------------------------------------------------------------------
65 HHSearch 52.2831% -97 - C1 -3IEV ERA_AQUAE A:[10-182] --VGYVAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNIPNEA-QIIFLDTPGI-----YEPKKSDVLGHSMVEIAKQ-SLEEADVILFMIDATEGWRPRDEEIYQNFIKPL-NKPVIVVINKIDK--I-----GPA--KNVLPLIDEIHKKHPELTEIVPISALKGANLDELVKTILKYLP-----EGE-----PLFPEDMITDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDA-NPNMLVIKGEIIVDRENLKPIIIGKKGQRLK--EIGKRARQELELILGRPVYLELWVKVVPDWRRRP-EYVRLFGYAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 52.2534% -99 - C1 -3R9X ERA_AQUAE A:[12-180] -----VAIVGKPNVGKSTLLNNLLGTKVSIISPKAGTTRMRVLGVKNI-PNEAQIIFLDTPGIYEPKKSDVLGH--SMVEIAKQ----SLEEADVILFMIDATEGWRPRDEEIYQ-NFIKPLNKPVIVVINKIDKIGPAKNVLPLI--DEIH----KKHP---ELTEIVPISALKGANLDELVKTILKYLP-----EGE-----PLFPEDMITDLPLRLLAAEIVREKAMMLTREEVPTSIAVKINEIKPGDA-NPNMLVIKGEIIVDRENLKPIIIGKKGQRLK--EIGKRARQELELILGRPVYLELWVKVVPDWRRRP-EYVRLFGYAL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 51.2832%-105 - C1 -3GEH MNME_NOSS1 A:[225-384] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKVAIVGRPNVGKSSLLNAWSQSDRAIVTDLPGTTRDVVESQ-LVVG-GIPVQVLD-------------------------QAANTADLVLLTIDAATGWTTGDQEI--Y-EQVKHRPLILVMNKIDLVEKQLITSLEYPENITQ---------IVHTAAAQKQGIDSLETAILEIVQTGKVQAADMDLAI-----NQRQAA-------ALTQAKMSLEQVQATITQQLPLDFWTIDLRGAIQAL--------GEITGEEV--TESVLDRI-FSRF-CIGK---------
63 HHSearch 50.9226%-101 - C1 -1MKY DER_THEMA A:[2-166] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATVLIVGRPNVGKSTLFNKLVK--------------DPVQDT-VEW-YGKTFKLVDTCGVFDNPQDI-ISQKM---KEVTLNMIREADLVLFVVDGKRGITKEDESLADF-LRKSTVDTILVANKAENLREFE---RE----VKPELYSLGFGEPIPVSAEHNINLDTMLETIIKKLEEKGLDLESKPEIT-----DAIKVA-------IVGRPNVGKSTLFNAILNKERALVSPIPVDDEVFID--------GRKYVFVD--TAGLEKYS-NYRV-VDSIEKADVVVIV