@TOME V2.3
(Nov 2016)

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1863: (2015-12-11 )
MVKKRYSKNSHNLITLLGIVVLASLISDFWSEVIATLLIIGGGYCAYYVYDKKRLKRFTSNQRIEALKSDIKETDQDIRHLEILKKDNRSKEYIKLAHQILPQLDLIRNEANQLQKAIEPNIYKRITKKANTFSNEINEQLIKLHASPELEPISDQEDEMIRIAPELKPFYHNIQDDHFAILKKIEEADNKAELAAIHQANMKRFTDVLAGYIRIKQSPKNFNNAKERLEQALQAIKKFNLDLDETLRQLNESDMKDFDVSLRMMQDERNSK

Atome Classification :

(20 SA) ---------------------------------------------------.........10........20........30..-....----------..40-----........50------------........60...-------------.....70........80......------------------..-----------90......--------..100.......110..----.....----120....---..--.130.......140....----...----150.....------..160.......170.......180-..--.......-190.......200----------..-------.....210....--------------------....220.......230.......240-.......250------------...---------......260.......270
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---------------------------------------------------MVKKRYSKNSHNLITLLGIVVLASLISDFWSEV-IATL----------LIIG-----GGYCAYYVYD------------KKRLKRFTSNQRI-------------EALKSDIKETDQDIRHLEILKKD------------------NR-----------SKEYIKLA--------HQILPQLDLIRNEANQL----QKAIE----PNIYKRI---TK--KANTFSNEINEQLIKLHA----SPE----LEPISDQE------DEMIRIAPELKPFYHNIQDDHFA---IL--KKIEEAD-NKAELAAIHQANM----------KR-------FTDVLA-GYIRI--------------------KQSPKNFNNAKERLEQALQAIKKFNLD-LDETLRQL--------------NES---------DMKDFDVSLRMMQDERNSK
32 Fugue 84.7918% -34 - C4 -4WGV - ? A:[5-399] VGYMDPGNWITSMQGGAQYGYTLLFVILISSLAAMLLQSMTVRLGIATGKDLAQMTRHFLSKPVAIIFWIIAELAIIATDIAEV-IGSAIALDLIFGIPLIVG-----ALITVFDVFL------------LLFIMRF-GFRKI-------------EAIVGTLIFTVLAIFVFEVFISSPQLTDILNGFVPHKEIVTNQ-----------GILYIALGIIGATIMPHNLYLHSSIVQSRKYDRHDNEEKAQA----IKYATID---SN--LQLSIAFVVNCLLLTLGA----ALF----FGTKTNDLGGFYDLYHALKTEPVLGATLGGVMSTLFAVA-LL--ASGQNST-ITGTLAGQIVMEGFLRLSIPNWLRR-------LITRSL-AVIPV--------------------IICLIIFKGNSEKIEQLLVFSQVFLSIALPFSLIPLQLATSNKKLMGPFINKT---------WVNIISWTLIVILSGLNVY
31 Fugue 84.2018% -53 - C2 -1A6Q PPM1A_HUMAN A:[2-368] -------------------------------------------------GAFLDKPKMEKHNAQGQGNGLRYGLSSMQGWRVEMEDAHT----------AVIGLPSGLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHG------------------ADRSGSTAVGVLISPQHTYFI--------NCGDSRGLLCRNRKVHFFTQDHKPSN----PLEKERI---QNA-GGSVMIQRVNGSLAVSRALGDFDYK----CVHGKGPT------EQLVSPEPEVHDIERSEEDDQFI---ILACDGIWDVM-GNEELCDFVRSRL----------EVTDDLEKVCNEVVD-TCLYKGSRDNMSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIKGVPD-LVHVMRTL--------------ASENIPSLPPGGELASKRNVIEAVYNRLNPY
39 Fugue 76.2916% -26 - C4 -1AEP - APL3_LOCMI A:[6-158] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NIA--------EAVQQLNHTIVNAAHEL----HETLGLPTPDEALNLL---TE--QANAFKTKIAEVTTSLKQ----EAE----KHQG--------------SVAEQLNAFARNLNNSIHD---AA--TSLNLQD-QLNSLQSALTNVG----------HQ-------WQDIAT-KTQAS--------------------AQ--EAWAPVQSALQEAAEKTKEAAAN-LQNSIQSA--------------VQK----------------------------
7 PsiBlast_PDB 74.3525% -17 - C3 -4PY5 ? A:[75-210] -------------------------------------------------------RIGCNEAGKGEFVGPLVVACIVAD--EKC-LKRL----------IELG------------VKD------------SKKL----SNEKV-------------EELASEITETCHGKVKLLIPEKY------------------NR-----------AYSKFKNI--------NRLLEA--VYREIVSDL----CEKFS----PKVV----------VVDKFSNRAEEVLKDVVK----GAR----LEVRPKAE------DDLAVAAASIVAKAVRLKTMKEL---EK--RFKVKLP-EGNTGLAELLKKT----------PK-------ELHEKL-FKLHF--------------------SV-------------------------------------------------------------------------------
36 Fugue 69.0514% -20 - C4 -4P3F SRP68_HUMAN A:[18-214] ------------------------------------------------------------DSLSLEILQIIKESQQQHGLRHG----------------------------------D------------FQRYRGYCS-RRQ-------------RRLRKTLNFKMGNRHKFTGKKVT------------------ED-----------LLTDNRYL--------LLVLMDAERAWSYAMQL----KQ-------------------------------EARKRFHL----LSR----LRKAVKHA------EELERLCESNR-------------------------------VDAKTKLEA----------QA-------YTAYLS-GMLRF--------------------EH--QEWKAAIEAFNKCKTIYEKLASA-FTEEQAVL--------------YNQ---------RVEEISPNIRYCAYNIG--
35 Fugue 69.0011% 8 - C4 -1FIO SSO1_YEAST A:[1-196] ------------------------------------------------------------------------------------------------------------------------------------MHDFVGFMNKI-------------SQINRDLDKYDHTINQVDSLHKR------------------LL-----------TEVNEEQA--------SHLRHSLDNFVAQATDL----QFKLK----NEIKSAQ---RD--GIHD-----------------------------TNKQ------AQAENSRQRFLKLIQDYRIVDSN---YK--EENKEQA-KRQYMIIQPEATE----------DE-------VEAAIS-----D--------------------VGGQQIFSQALLEAKTALAEVQARHQE-LLKLEKSM--------------AEL---------TQLFNDMEELVIEQQ----
38 Fugue 66.9612% -3 - C4 -2KBB - TLN1_MOUSE A:[1649-1822] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GID------------------PF-----------TAPGQLEC--------ETAIAALNSCLRDLDQA----SLAAV----SQQLAPREGISQ--EALHTQMLTAVQEISHLI----EPL----ASAARAEA------SQLGHKVSQMAQYFEPLTLAAVG---AA--SKTLSHP-QQMALLDQTKTLA----------ES-------ALQLLY-TAKEA--------------------GGNPKQAAHTQEALEEAVQMMTEAVED-LTTTLNEA--------------ASA---------AG-----------------
40 Fugue 66.359% -39 - C4 -2KVP - A:[1809-1973] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------G-----------IDPFTNEA--------ASAAGVVGGMVDSITQA----INQLD----EGPMGDP---EG--SFVDYQTTMVRTAKAIAV----TVQEM--VTKSNTSP------EELGPLANQLTSDYGRLASQAKP---AA--VAAENEE-IGAHIKHRVQELG----------HG-------CSALVT-KAGAL--------------------QCSPSD-VYTKKELIECARRVSEKVSH-VLAALQAG--------------NR-----------------------------
37 Fugue 66.3010% -11 * C4 *1K40 - FAK1_MOUSE A:[921-1046] ----------------------------------------------------------------------------------------------------------------------------------------------N-------------DKVYENVTGLVKAVIEMSSKIQP------------------AP-----------PEEYVPMV--------KEVGLALRTLLATVDET----IPALP----ASTHREI---EM--AQKLLNSDLGELISKMKL----AQQ--------YVMT------SLQQEYKKQMLTAAHALAVDAKN---LL--DVIDQAR-LKML---------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 54.5032% -15 - C3 -1ZHH - LUXQ_VIBHA B:[15-70] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RTKQQTSALIHNIFDSHFA---AI--QIHHDSN-SKSEV--IRDFYT----------DR-------DTDVLNFFFLSI--------------------DQSDPSHTPEFRFLTDHKGIIWDDGNA-HFYGVNDL--------------ILD---------SLANRVSFSNNWYYINVMT
3 PsiBlast_PDB 54.2429% 10 - C3 -4H7Y - TTK_HUMAN A:[66-122] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFA---EL--KAIQEPD-DARDYFQMARANC----------KK-------FAFVHI-SFAQF--------------------ELSQGNVKKSKQLLQKAVERGAVPLEM-LEIALRNL--------------NLQ---------KKQLLSEEE----------
2 PsiBlast_PDB 52.9029% 8 - C3 -4H7X - TTK_HUMAN A:[66-122] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFA---EL--KAIQEPD-DARDYFQMARANC----------KK-------FAFVHI-SFAQF--------------------ELSQGNVKKSKQLLQKAVERGAVPLEM-LEIALRNL--------------NLQ---------KKQLLS-------------
5 PsiBlast_PDB 52.1126% 8 - C3 -205L ENLYS_BPT4 A:[19-101] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KD------------------TE-----------GYYTIGIG--------HLLT----AAKSAAAEL----DKAIG----RNTNGVI---TKDEAEKLFNQDVDAAVRGILR----NAK----LKPVYDSL------DAVRRAALINMVFQMGETGVAGF---TN--SLRMLQQ-KRWDEAAVNLAKS----------RW-------YNQTPN-RAKRV--------------------ITTFRTGTWDAYK--------------------------------------------------------------------
4 PsiBlast_PDB 51.3429% 17 - C3 -4B94 TTK_HUMAN A:[57-113] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RFA---EL--KAIQEPD-DARDYFQMARANC----------KK-------FAFVHI-SFAQF--------------------ELSQGNVKKSKQLLQKAVERGAVPLEM-LEIALRNL--------------NLQ---------KKQLLSEEE----------
1 PsiBlast_PDB 47.5124% 6 - C3 -4I6K ? A:[153-229] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VELHA----PPK----Y---------------LVQLLPQLNEYSFDVVIDHFGRVDPV--KGIEDPD-YQKFLSLL---NV----------KQ-------HWIKVS-GFYRL--------------------GATPSNINIAQQAYNIFKEKGFLHKLI-WGSDWPHT--------------QHE---------SLITYEDAIKAFKQIVFDK
13 PsiBlast_PDB 45.0634% 47 - C3 -4AMQ YL544_MIMIV A:[79-127] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------D----TNIYQRI---VD--LINSFTNDNQIKLIYVIC----GTDDRFLLTEYSDEE------IEKIKILLNPTELVELNNVNKKV---FY--INEIIWD-LYKLRWTSSEVLA----------GK-------KILRGG-IEVSF--------------------QDVVKNNSILLLQYFVKIEYYPIGFDI-AVRYKPFY--------------QLK---------LANYSKEYYFMLFPLRFYF
24 HHSearch 40.098% 37 - C3 -3F1I - H:[31-79] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TNDSAVLSLFQSINGMHPQ---LL--ELLNQLDERRLYYEGLQD--------------K-------LAQIRD-ARGAL--------------------SALREEHREKLRRAAEE----------------------------------------------------------------
12 PsiBlast_PDB 39.7923% 59 - C5 -1S17 DEF_PSEAE A:[61-136] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATQ----VNVHKRI---V----VMDLSEDKSEP--RVFI----NPE----FEPLTEEM------DQYQEGCLSVPGFYENVDRPQKV---RI--KALDRDG-NPFEEVAEGLLAV----------CI-------QHECDH-LNGKL--------------------FVDYLSTLKRDRIRKKLEKQHRQQ---------------------------------------------------------
11 PsiBlast_PDB 39.2223% 58 * C5 *1N5N DEF_PSEAE A:[61-136] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ATQ----VNVHKRI---V----VMDLSEDKSEP--RVFI----NPE----FEPLTEEM------DQYQEGCLSVPGFYENVDRPQKV---RI--KALDRDG-NPFEEVAEGLLAV----------CI-------QHECDH-LNGKL--------------------FVDYLSTLKRDRIRKKLEKQHRQQ---------------------------------------------------------
6 PsiBlast_PDB 39.2230% 34 - C1 -3MI6 - ? A:[104-164] -------------------------------------------------------------------------------------------------------------------TYD------------HYQL--LTGKQRL-------------ANLPSTFDDTDDDAQTLVVSFND------------------RI-----------TGLALDLN--------YSIFPHQDVIVKSAKFT----NPSSE----KLVLNRA---LS--SQLDLPDANYDLIQFSGT----WAR----ERHLYRHP------LRPGMQSISSLRMASSHQQNPFM---ML--ARPQTTD-EQGAVFGFNLVYS----------GN-------FLDAIE-VDQYS--------------------TSRILTGINPDEFGWNLAPQATFQTPE-AILSYTSA--------------GMN---------QLSQQMASFYQQHLVNPRF