@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1900: (2015-12-11 )
MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQVSAGIYAYLPLANRTIEKFKTIMRQEFEKIGAVEMLAPALLTADLWRESGRYETYGEDLYKLKNRDQSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFIMKDGYSFHKDYEDLDVTYEDYRKAYEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAVTPNRTDLNRWLVLDKTIPSIDDIPEDVLEEIKVELSAWLVSGEDTIAYSTESSYAANLEMATNEYKPSTKAATFEEVTRVETPNCKSIDEVAGFLSIDENQTIKTLLFIADEQPVVALLVGNDQVNDVKLKNYLAADFLEPASEEQAKEIFGAGFGSLGPVNLPDSVKIIADRKVQDLANAVSGANQDGYHFTGVNPERDFTAEYVDIREVKEGEISPDGKGTLKFARGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVSRILSAVIEQHARLFVNKTPKGAYRFAWGINFPEELAPFDVHLITVNVKDQESQDLTEKIEADLMLKGYEVLTDDRNERVGSKFSDSDLIGLPIRVTVGKKASEGIVEVKIKASGDTIEVHADNLIETLEILTKK

Atome Classification :

(20 SA) .........10........20......-..-30..------------.---.....40........50........60-..-......70........80-.-.......90....--------------------....---------------------------------------------------------------------------------100--....---------....-----------.110.......120--..-....---..130.......140...-.-...150....-...160.......170------...---------------------------------...---...180....-.-..-190--........200-----..--.......210.......220......-.230.......240........250......---.260........270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400....---...410...-.-...420-.........430..-.....440.......450.......460....-..-.470.--....-...480.-........490.......500.......510.......520......---.530-.---.-------......540......--------------.550......-.-560........570....-....580-......---...590......--.----600.......610.....------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MKQSKMLIPTLREMPSDAQVISHALMV-RA-GYVR------------Q---VSAGIYAYLPLANRTIEKFKTIMRQEF-EK-IGAVEMLAPALLTADLWR-E-SGRYETYGEDLYK--------------------LKNR---------------------------------------------------------------------------------D----QSDF---------ILGP-----------THEETFTTLVRDA---VK-SYKQ---LPLNLYQIQSKYRDEKRP-R-NGLLRTREFI-MKDGYSFHKDYEDL--------DVT---------------------------------YED---YRKAYEAIFT-R-AG-LD---FKGIIGDGG-------AM--GGKDSQEFMAVTPNRTDLNRWLVLDK-TIPSIDDIPEDV-LEEIKVELSAWLVSGEDT---IA-YSTESSYAANLEMATNEYKPSTKAATFEEVTRVETPNCKSIDEVAGFLSIDENQTIKTLLFIADEQPVVALLVGNDQVNDVKLKNYLAADFLEPASEEQAKEIFGAGFGSLGPVNLPDSVKIIADRKVQDLANAVSGANQDGYHFT---GVNPERDFT-A-EYVD---IREVKEGEISPDGK-GTLKFARGIEIGHIFKLGTRYSDSMGANILDE-NG-RS-NP--IVMG-CYGI--G-VSRILSAVIEQHARLFVNKTPKGAYRFAWGINFPEELAPFDVHLITV---NVK--D---Q-------ESQDLTEKIEADLML--------------KGYEVLTDDR-N-ER-VGSKFSDSD-LIGLP-IRVTV---GKKASE---GIVEVKIKASGD--T----IEVHADNLIETLEILTKK------------------------------------------------------------------------------------------
66 Fugue 97.5164% -82 - C1 -2J3L SYP_ENTFA A:[1-565] MKQSKMLIPTLREVPNDAEVLSHQILL-RA-GYIR------------Q---VAAGIYSYLPLANRVLEKLKTIMREEF-EK-IDAVEMLMPALLPAELWK-E-SGRYETYGPNLYR--------------------LKDR---------------------------------------------------------------------------------N----DRDY---------ILGP-----------THEETFTELIRDE---IN-SYKR---LPLNLYQIQTKYRDEKRS-R-SGLLRGREFI-MKDGYSFHADEASL--------DQS---------------------------------YRD---YEKAYSRIFE-R-CG-LE---FRAIIGDGG-------AM--GGKDSKEFMAISE----------------------------------------IGEDT---IC-YSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEVANFFEVEPQRIIKSVLFIADEEPVMVLVRGDHDVNDVKLKNFLGADFLDEATEEDARRVLGAGFGSIGPVNVSEDVKIYADLAVQDLANAIVGANEDGYHLT---NVNPDRDFQ-PISYED---LRFVQEGDPSPDGN-GVLAFTKGIEIGHIFKLGTRYSDAMGATVLDE-NG-RE-KS--VIMG-CYGI--G-VSRLLSAIVEQNAD-------------ERGINWPTGIAPFDLHVVQM---NVK--D---E-------YQTKLSQEVEAMMTE--------------AGYEVLVDDR-N-ER-AGVKFADAD-LIGCP-IRITV---GKKAVD---GVVEVKIKRTGE--M----LEVRKEELESTLSILM--------------------------------------------------------------------------------------------
45 HHSearch 97.4564% -82 - C1 -2J3L SYP_ENTFA A:[1-565] MKQSKMLIPTLREVPNDAEVLSHQILL-RA-GYIR------------Q---VAAGIYSYLPLANRVLEKLKTIMREEF-EK-IDAVEMLMPALLPAELWK-E-SGRYETYGPNLYR--------------------LKDR---------------------------------------------------------------------------------N----DRDY---------ILGP-----------THEETFTELIRDE---IN-SYKR---LPLNLYQIQTKYRDEKRS-R-SGLLRGREFI-MKDGYSFHADEASL--------DQS---------------------------------YRD---YEKAYSRIFE-R-CG-LE---FRAIIGDGG-------AM--GGKDSKEFMAISEIG----------------------------------------EDT---IC-YSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEVANFFEVEPQRIIKSVLFIADEEPVMVLVRGDHDVNDVKLKNFLGADFLDEATEEDARRVLGAGFGSIGPVNVSEDVKIYADLAVQDLANAIVGANEDGYHLT---NVNPDRDFQPI-SYED---LRFVQEGDPSPDGN-GVLAFTKGIEIGHIFKLGTRYSDAMGATVLDE-NG-RE-KS--VIMG-CYGI--G-VSRLLSAIVEQNAD-------------ERGINWPTGIAPFDLHVVQM---NVK--D---E-------YQTKLSQEVEAMMTE--------------AGYEVLVDDR-N-ER-AGVKFADAD-LIGCP-IRITV---GKKAVD---GVVEVKIKRTGE--M----LEVRKEELESTLSILM--------------------------------------------------------------------------------------------
1 PsiBlast_PDB 95.4759% -83 - C1 -2J3L SYP_ENTFA A:[1-564] MKQSKMLIPTLREVPNDAEVLSHQILL-RA-GYIR------------Q---VAAGIYSYLPLANRVLEKLKTIMREEF-EK-IDAVEMLMPALLPAELWK-E-SGRYETYGPNLYR--------------------LKDR---------------------------------------------------------------------------------N----DRDY---------ILGP-----------THEETFTELIRDE---IN-SYKR---LPLNLYQIQTKYRDEKRS-R-SGLLRGREFI-MKDGYSFHADEASL--------DQS---------------------------------YRD---YEKAYSRIFE-R-CG-LE---FRAIIGDGG-------AM--GGKDSKEFMAIS------------------------------EI----------GEDT---IC-YSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEVANFFEVEPQRIIKSVLFIADEEPVMVLVRGDHDVNDVKLKNFLGADFLDEATEEDARRVLGAGFGSIGPVNVSEDVKIYADLAVQDLANAIVGANEDGYHLT---NVNPDRDFQ-PISYED---LRFVQEGDPSPDGN-GVLAFTKGIEIGHIFKLGTRYSDAMGATVLDE-NG-RE-KS--VIMG-CYGI--G-VSRLLSAIVEQNAD-------------ERGINWPTGIAPFDLHVVQM---NVK--D---E-------YQTKLSQEVEAMMTE--------------AGYEVLVDDR-N-ER-AGVKFADAD-LIGCP-IRITV---GKKAVD---GVVEVKIKRTGE--M----LEVRKEELESTLSILM--------------------------------------------------------------------------------------------
2 PsiBlast_PDB 94.8359% -76 - C1 -2J3M SYP_ENTFA A:[1-564] MKQSKMLIPTL-------EVLSHQILL-RA-GYIR------------Q---VAAGIYSYLPLANRVLEKLKTIMREEF-EK-IDAVEMLMPALLPAELWK-E-SGRYETYGPNLYR--------------------LKDR---------------------------------------------------------------------------------N----DRDY---------ILGP-----------THEETFTELIRDE---IN-SYKR---LPLNLYQIQTKYRDEKRS-R-SGLLRGREFI-MKDGYSFHADEASL--------DQS---------------------------------YRD---YEKAYSRIFE-R-CG-LE---FRAIIGD-------------GGKDSKEFMAIS------------------------------EI----------GEDT---IC-YSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEVANFFEVEPQRIIKSVLFIADEEPVMVLVRGDHDVNDVKLKNFLGADFLDEATEEDARRVLGAGFGSIGPVNVSEDVKIYADLAVQDLANAIVGANEDGYHLT---NVNPDRDFQ-PISYED---LRFVQEGDPSPDGN-GVLAFTKGIEIGHIFKLGTRYSDAMGATVLDE-NG-RE-KS--VIMG-CYGI--G-VSRLLSAIVEQNAD-------------ERGINWPTGIAPFDLHVVQM---NVK--D---E-------YQTKLSQEVEAMMTE--------------AGYEVLVDDR-N-ER-AGVKFADAD-LIGCP-IRITV---GKKAVD---GVVEVKIKRTGE--M----LEVRKEELESTLSILM--------------------------------------------------------------------------------------------
22 PsiBlast_CBE 94.7759% -80 - C1 -2J3L SYP_ENTFA B:[1-564] MKQSKMLIPTLREVPNDAEVLSHQILL-RA-GYIR------------Q---VAAGIYSYLPLANRVLEKLKTIMREEF-EK-IDAVEMLMPALLPAELWK-E-SGRYETYGPNLYR--------------------LKDR---------------------------------------------------------------------------------N----DRDY---------ILGP-----------THEETFTELIRDE---IN-SYKR---LPLNLYQIQTKYRDEKRS-R-SGLLRGREFI-MKDGYSFHADEASL--------DQS---------------------------------YRD---YEKAYSRIFE-R-CG-LE---FRAIIGDGG-------AM--GGKDSKEFMAIS------------------------------EI----------GEDT---IC-YSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEVANFFEVEPQRIIKSVLFIADEEPVMVLVRGDHDVNDVKLKNFLGADFLDEATEEDARRVLGAGFGSIGPVNVSEDVKIYADLAVQDLANAIVGANEDGYHLT---NVNPDRDFQ-PISYED---LRFVQEGDPSPDGN-GVLAFTKGIEIGHIFKLGTRYSDAMGATVLDE-NG-RE-KS--VIMG-CYGI--G-VSRLLSAIVEQNAD-------------ERGINWPTGIAPFDLHVVQM---NVK--D---E-------YQTKLSQEVEAMMTE--------------AGYEVLVDDR-N-ER-AGVKFADAD-LIGCP-IRITV---GKKAVD---GVVEVKIKRTGE--M----LEVRKEELESTLSILMNT------------------------------------------------------------------------------------------
21 PsiBlast_CBE 94.4859% -77 - C1 -2J3M SYP_ENTFA B:[1-564] MKQSKMLIPTL-------EVLSHQILL-RA-GYIR------------Q---VAAGIYSYLPLANRVLEKLKTIMREEF-EK-IDAVEMLMPALLPAELWK-E-SGRYETYGPNLYR--------------------LKDR---------------------------------------------------------------------------------N----DRDY---------ILGP-----------THEETFTELIRDE---IN-SYKR---LPLNLYQIQTKYRDEKRS-R-SGLLRGREFI-MKDGYSFHADEASL--------DQS---------------------------------YRD---YEKAYSRIFE-R-CG-LE---FRAIIGDGG-------AM--GGKDSKEFMAIS------------------------------EI----------GEDT---IC-YSTESDYAANLEMATSLYTPKKSHETQLDLEKIATPEVGTIAEVANFFEVEPQRIIKSVLFIADEEPVMVLVRGDHDVNDVKLKNFLGADFLDEATEEDARRVLGAGFGSIGPVNVSEDVKIYADLAVQDLANAIVGANEDGYHLT---NVNPDRDFQ-PISYED---LRFVQEGDPSPDGN-GVLAFTKGIEIGHIFKLGTRYSDAMGATVLDE-NG-RE-KS--VIMG-CYGI--G-VSRLLSAIVEQNAD-------------ERGINWPTGIAPFDLHVVQM---NVK--D---E-------YQTKLSQEVEAMMTE--------------AGYEVLVDDR-N-ER-AGVKFADAD-LIGCP-IRITV---GKKAVD---GVVEVKIKRTGE--M----LEVRKEELESTLSILM--------------------------------------------------------------------------------------------
46 HHSearch 68.6839% -66 - C1 -2I4L - SYP_RHOPA A:[1-436] MRLSRFFLPILKENPKEAEIVSHRLML-RA-GMLR------------Q---EAAGIYAWLPLGHRVLKKIEQIVREEQ-NR-AGAIELLMPTLQLADLWR-E-SGRYDAYGPEMLR--------------------IADR---------------------------------------------------------------------------------H----KREL---------LYGP-----------TNEEMITEIFRAY---IK-SYKS---LPLNLYHIQWKFRDEQRP-R-FGVMRGREFL-MKDAYSFDVDEAGA--------RKS---------------------------------YNK---MFVAYLRTFA-R-MG-LKA--IPMRAET-G-------PI--GGDLSHEFIVLAETG----------------------------------------ESG---VY-IDRDVLN---L--P----VP---------------D-----E-NV--------------DY-----------DG-------DLTP----------IIKQWTSVYAATE---------------------------------DVHE--------PARYE--------------------SEVPEANRLNTRGIEVGQIFYFGTKYSDSMKANVTGP-DG-TD-AP--IHGG-SYGV--G-VS