@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs1986: (2015-12-12 )
MFINNYTLKIGNRILLENTNLDFEEGEINHLLGRNGSGKSQLAKDFIINRGNYFSNDIYEDTLIISSYSNLPSDVTINDLERTIPWKLSKEIYQLLNINQISKTVKLKQLSDGQKQKVKLLVLLSLDKHIIILDEITNALDKKSVDEINVFLQNYIQYYPEKIIINISHDINNIRSLKGNYFLIDNQKICKVDTLDDAISWYLGE

Atome Classification :

(20 SA) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10--.----.......20........30........40.------------....----------.----..50.-.....------------.---------------..------60--------.--------.-----------------.---.....70--------------.-----....-------.------..80....----------.-------------------.---.-.90-------.......----.--------------.100..----------...-------------.---.-------110--------------------........120.......130.......140......-.150.......160.......170.......180.......190.......200...---------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MFINNYTLKIG--N----RILLENTNLDFEEGEINHLLGRNGSGKSQL------------AKDF----------I----INR-G-NYFSN------------D---------------IY------ED--------T--------L-----------------I---ISSYSNL--------------P-----SDVT-------I------NDLERTIP----------W-------------------K---L-SK--------EIYQLLN----I--------------NQISKT----------VKL-------------K---Q-------LS---------------------DGQKQKVKLLVLLSLDKHIIILDEITNALDKKSVDEI-NVFLQNYIQYYPEKIIINISHDINNIRSLKGNYFLIDNQKICKVDTLDDAISWYLGE---------
91 HHSearch 86.4221% -79 - C1 -3GD7 CFTR_HUMAN (first) A:[20-244] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MTVKDLTAKYTEGG----NAILENISFSISPGQRVGLLGRTGSGKSTL------------LSAFLR--------L----LNT-E-GEIQI------------D---------------GV------SWDSITL---E--------Q-----------------W---RKAFGVI--------------P-----QKVF-------IFSGTF-RKNLDPNA----------AHSD----------------Q---E-IW--------KVADEVG----L--------------RSVIEQFPGKLDFVLVDGG-------------C---V-------LS---------------------HGHKQLMCLARSVLSKAKILLLDEPSAHLDPVTYQII-RRTLKQAF---ADCTVILCEARIEAM-LECDQFLVIEENKVRQYDSILELYHYPADR---------
9 PsiBlast_PDB 85.0923% -81 - C1 -4U00 ? A:[19-218] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLKGIHLEVAPGEKLVIIGPSGSGKSTL------------IR------------T----INRLE-DFQEG------------E---------------VV------VD--------G--------LSVKDDRALREIRREVGMV---FQQFNLF--------------PHMTVLENVT-------L------APM-RVRR----------WPRE----------------K---A-EK--------KALELLERVGIL--------------DQARKY----------PA------------------Q-------LS---------------------GGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEV-LDVMRDLAQGG--MTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEE---------
7 PsiBlast_PDB 84.4023% -71 - C1 -1OXU ? A:[12-227] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFKKG--K----VVALDNVNINIENGERFGILGPSGAGKTTF------------MR-I----------I----AGL-D-VPSTG------------E---------------LY------FD--------D--------R-----------------L---VASNGKLIVP-----------P-----EDRK-------I------GMVFQT------------WALYPNLTAFENIAFPLTNMK---M-SKEEIRKRVEEVAKILD----I--------------HHVLNH----------FP--------------R---E-------LS---------------------GGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSA-RALVKE-VQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSI---------
17 PsiBlast_PDB 84.2224% -69 - C1 -4MKI ECFA2_CALS4 B:[25-231] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VALKDINFSIDDEEFVGIIGHTGSGKSTL------------IQQLNGLL------K----PSK-G-KIYINGIDITDKKVSLKD---------------IR------KQ--------V--------G-----------------L---VFQYPEYQLFEETVFKDIAFGP-----SNLG-------L------SEEE--------------------------------------V-KE--------RVYEAME----I--------------VGISKE----------LAD-------------KSPFE-------LS---------------------GGQKRRVAIAGILAMRPKILILDEPTAGLDPKGKQEILNKIKEIHDKY--KMITILVSHNMEDIARIADKIIVMNRGKIELIGTPREVFREAERL---------
8 PsiBlast_PDB 84.1123% -71 - C1 -1OXV ? A:[12-227] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFKKG--K----VVALDNVNINIENGERFGILGPSGAGKTTF------------MR-I----------I----AGL-D-VPSTG------------E---------------LY------FD--------D--------R-----------------L---VASNGKLIVP-----------P-----EDRK-------I------GMVFQT------------WALYPNLTAFENIAFPLTNMK---M-SKEEIRKRVEEVAKILD----I--------------HHVLNH----------FP--------------R---E-------LS---------------------GGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSA-RALVKE-VQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSI---------
83 HHSearch 83.9024% -69 - C1 -2IT1 - ? A:[4-224] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKLENIVKKFG--N----FTALNNINLKIKDGEFMALLGPSGSGKSTL------------LYTIAG--------I----YKP-TSGKIYF------------D---------------EK------DVTEL-----P--------P-----------------K---DRNVGLV--------------F-----QNWA-------LYPHMTVYKNIAFPL----------ELRKAPREEID---------K---K-VR--------EVAKMLH----I--------------DKLLN-----------RYP-------------W---Q-------LS---------------------GGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEV-RAELKRLQK-ELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYK---------
10 PsiBlast_PDB 83.2023% -90 - C1 -4U02 ? A:[19-218] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VLKGIHLEVAPGEKLVIIGPSGSGKSTL------------IR------------T----INRLE-DFQEG------------E---------------VV------VD--------G--------LSVKDDRALREIRREVGMV---FQQFNLF--------------PHMTVLENVT-------L------APM-RVRR----------WPRE----------------K---A-EK--------KALELLERVGIL--------------DQARKY----------PA------------------Q-------LS---------------------GGQQQRVAIARALAMEPKIMLFDEPTSALDPEMVGEV-LDVMRDLAQGG--MTMVVVTHEMGFAREVADRVVFMDGGQIVEEGRPEEIFTRPKEE---------
19 PsiBlast_PDB 81.9622% -93 - C2 -1Q1B - MALK_ECOLI A:[6-215] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQNVTKAWG--E----VVVSKDINLDIHEGEFVVFVGPSGCGKSTL------------LR-M----------I----AGL-E-TITSG------------D---------------LFIGEKRMND--------TPPAERGVGM-----------------V---FQSYALY--------------P-----HLSV-------A------ENM--SFG----------L-------------------K---L-AG--------AKKEVINQR--V--------------NQVAEV----------LQLAHLLDRKP-----K---A-------LS---------------------GGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQM-RIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADR---------
102 Fugue 81.5623% -74 - C1 -3B60 MSBA_SALTY A:[10-581] WQTFRRLWPTIAPFKAGLIVAGIALILNAASDTFMLSLLKPLLDDGFGKTDRSVLLWMPLVVIGLMILRGITSYISSYCISWVSGKVVMTMRRRLFGHMMGMPVAFFDKQSTGTLLSRITYDSEQVASSSSGALITVVREGASIIGLFIMMFYYSWQLSIILVVLAPIVSIAIRVVSKRFRSISKNMQNTMGQVTTSAEQMLKGHKEVLIFGGQEVETKRFDKVSNKMRLQGMKMVSASSISDPIIQLIASLALAFVLYAASFPSVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMAACQTLFAILDSEQEKDEGKRVIDRATGDLEFRNVTFTYP--GRE--VPALRNINLKIPAGKTVALVGRSGSGKSTI------------ASLITRFYDIDEGHI----LMD-G-HDLREYTLA--------S---------------LR------NQ--------V--------A-----------------L---VSQNVHL--------------F-----NDTV-------A------NNIAYART----------E-------------------E---YSRE--------QIEEAAR----M--------------AYAMDF----------INKMDNGLDTIIGENGV---L-------LS---------------------GGQRQRIAIARALLRDSPILILDEATSALDTESERAI-QAALDELQK---NRTSLVIAHRLSTIEQAD-EIVVVEDGIIVERGTHSELLAQHGVYAQLHKMQFG
18 PsiBlast_PDB 80.9323% -61 - C1 -2IT1 - ? A:[6-220] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LENIVKKFG--N----FTALNNINLKIKDGEFMALLGPSGSGKSTLLYTI--------AGIY----------K----PTS-G-KIYFD------------EKDVTELPPKDRNVGLVF------QN--------W--------A-----------------LYPHMTVYKNI--------------A-----FPLE-------L------RKAPREEI----------D-------------------K---K-VR--------EVAKMLH----I--------------DKLLNR----------YPW-----------------Q-------LS---------------------GGQQQRVAIARALVKEPEVLLLDEPLSNLDALLRLEV-RAELKR-LQKELGITTVYVTHDQAEALAMADRIAVIREGEILQVGTPDEVYYKPKYK---------
5 PsiBlast_PDB 80.7023% -66 - C1 -1OXS ? C:[12-227] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFKKG--K----VVALDNVNINIENGERFGILGPSGAGKTTF------------MR-I----------I----AGL-D-VPSTG------------E---------------LY------FD--------D--------R-----------------L---VASNGKLIVP-----------P-----EDRK-------I------GMVFQT------------WALYPNLTAFENIAFPLTNMK---M-SKEEIRKRVEEVAKILD----I--------------HHVLNH----------FP--------------R---E-------LS---------------------GGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSA-RALVKE-VQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSI---------
20 PsiBlast_PDB 79.9922% -91 - C2 -1Q12 MALK_ECOLI A:[6-215] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LQNVTKAWG--E----VVVSKDINLDIHEGEFVVFVGPSGCGKSTL------------LR-M----------I----AGL-E-TITSG------------D---------------LFIGEKRMND--------TPPAERGVGM-----------------V---FQSYALY--------------P-----HLSV-------A------ENM--SFG----------L-------------------K---L-AG--------AKKEVINQR--V--------------NQVAEV----------LQLAHLLDRKP-----K---A-------LS---------------------GGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQM-RIEISRLHKRL-GRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADR---------
16 PsiBlast_PDB 79.7723% -64 - C1 -1OXX ? K:[12-227] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFKKG--K----VVALDNVNINIENGERFGILGPSGAGKTTF------------MR-I----------I----AGL-D-VPSTG------------E---------------LY------FD--------D--------R-----------------L---VASNGKLIVP-----------P-----EDRK-------I------GMVFQT------------WALYPNLTAFENIAFPLTNMK---M-SKEEIRKRVEEVAKILD----I--------------HHVLNH----------FP--------------R---E-------LS---------------------GAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSA-RALVKE-VQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSI---------
94 HHSearch 79.5122% -85 - C1 -3GFO ECFA3_CLOP1 A:[8-235] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LKVEELNYNYS--DG---THALKGINMNIKRGEVTAILGGNGVGKSTL------------FQNF----------NGI--LKPSS-GRILF------------D---------------NK------PIDYSRKGI-M--------K-----------------L---RESIGIV--------------F-----QDPDNQLFSASV------YQDVSFGAVNMKLPEDEIR-------------------K---R-VD--------NALKRTG----I--------------EHLK-D----------KPT-------------H---C-------LS---------------------FGQKKRVAIAGVLVMEPKVLILDEPTAGLDPMGVSEI-MKLLVEMQK-ELGITIIIATHDIDIVPLYCDNVFVMKEGRVILQGNPKEVFAEKEVI---------
21 PsiBlast_CBE 79.4931% -80 - C1 -4PL0 MCJD_ECOLX B:[360-540] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILNSVSLDLFTGKMYSLTGPSGSGKSTL------------VKII----------S----GYY-K-NYF-G------------D---------------IY------LN--------D--------I-----------------------SLRNI--------------------SDED-------L------ND----AI----------Y-------------------Y---L-TQ--------DDYIFMD----TLRFNLRLANYDASENEIFKV----------LKL-------------A---N-------LSVVNNEPVSLDTHLINRGNNYSGGQKQRISLARLFLRKPAIIIIDEATSALDYINESEI----LSSIRTHFPDALIINISHRINLLECSDCVYVLNEGNIVASGHFRDLMVSNEYIS---------
6 PsiBlast_PDB 79.2223% -72 - C1 -1OXT - ? A:[12-227] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------VFKKG--K----VVALDNVNINIENGERFGILGPSGAGKTTF------------MR-I----------I----AGL-D-VPSTG------------E---------------LY------FD--------D--------R-----------------L---VASNGKLIVP-----------P-----EDRK-------I------GMVFQT------------WALYPNLTAFENIAFPLTNMK---M-SKEEIRKRVEEVAKILD----I--------------HHVLNH----------FP--------------R---E-------LS---------------------GGQQQRVALARALVKDPSLLLLDEPFSNLDARMRDSA-RALVKE-VQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDNPVSI---------
84 HHSearch 78.9719% -72 - C1 -3FVQ FBPC_NEIG1 A:[5-230] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LHIGHLSKSFQ--N----TPVLNDISLSLDPGEILFIIGASGCGKTTL------------LRCLAG--------F----EQP-DSGEISL------------S---------------GK------TIFSKNTNL-P--------V-----------------R---ERRLGYL--------------V-----QEGV-------LFPHLTVYRNIAYGL----------GNGKGRTAQER---------Q---R-IE--------AMLELTG----I--------------SELAG-----------RYP-------------H---E-------LS---------------------GGQQQRAALARALAPDPELILLDEPFSALDEQLRRQI-REDMIAALR-ANGKSAVFVSHDREEALQYADRIAVMKQGRILQTASPHELYRQPADL---------
81 HHSearch 78.6521% -67 * C1 *3TUI METN_ECOLI C:[25-255] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IKLSNITKVFH--QGTRTIQALNNVSLHVPAGQIYGVIGASGAGKSTL------------IRCVNL--------L----ERP-TEGSVLV------------D---------------GQ------ELTTLSESELT--------K-----------------A---RRQIGMI--------------F-----QHFN-------LLSSRTVFGNVALPL----------ELDNTPKDEVK---------R---R-VT--------ELLSLVG----L--------------GDKHD-----------SYP-------------S---N-------LS---------------------GGQKQRVAIARALASNPKVLLCDQATSALDPATTRSI-LELLKDINR-RLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSHPKTP---------
1 PsiBlast_PDB 78.4831% -81 - C1 -4PL0 MCJD_ECOLX A:[360-540] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ILNSVSLDLFTGKMYSLTGPSGSGKSTL------------VKII----------S----GYY-K-NYF-G------------D---------------IY------LN--------D--------I-----------------------SLRNI--------------------SDED-------L------ND----AI----------Y-------------------Y---L-TQ--------DDYIFMD----TLRFNLRLANYDASENEIFKV----------LKL-------------A---N-------LSVVNNEPVSLDTHLINRGNNYSGGQKQRISLARLFLRKPAIIIIDEATSALDYINESEI----LSSIRTHFPDALIINISHRINLLECSDCVYVLNEGNIVASGHFRDLMVSNEYIS---------
13 PsiBlast_PDB 78.3723% -73 - C1 -4YMU ? J:[2-222] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IFVNDVYKNFG--S----LEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVF----------IDGVKINN-G-KVNIN------------K---------------VR------QK--------V--------G-----------------M---VFQHFNL--------------F-----PHLT-------A------IENITLAP----------V-------------------KVKKM-NK--------KEAEELA----V--------------DLLAKV----------GLL-------------D---KKDQYPIKLS---------------------GGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANEGM---TMVVVTHEMGFAREVGDRVIFMDDGVIVEEGTPEEIFYRAKNE---------