@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : gbs2009: (2015-12-12 )
MTKIIYFADDEKNIRDLVVPFLEHDGFTVRAFETGDLLLEAYKNQKPDLVILDIMMPGTNGLDVMKSIRQYDNIPIIMLTARDSDVDFITAFNLGTDDYFTKPFSPIKLSLHVKALFKRLDEKAIKNDTQYQFLDLTLDTEKRIALLSNEEMPLTKTEFDFLLVLIEKPETAFSRETLLNRIWGFDDIESRAVDDTIKRLRKKFKQYHSQVSIKTVWGYGFKLIKEDK

Atome Classification :

(20 SA) .........10........20........30......---..40........50........60........70-.---.-.-.....80.......-.90........100.......110.......-120......-.130.......140.......150.......160.......170.......180...-.-..-.-190.......200..-....-.210........220......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MTKIIYFADDEKNIRDLVVPFLEHDGFTVRAFETGDL---LLEAYKNQKPDLVILDIMMPGTNGLDVMKSIRQY-D---N-I-PIIMLTARDSDVDF-ITAFNLGTDDYFTKPFSPIKLSLHVKALFKR-LDEKAIKND-TQYQFLDLTLDTEKRIALLSNEEMPLTKTEFDFLLVLIEKPETAFSRETLLNRIWGF-D-DI-E-SRAVDDTIKRLRKKF-KQYH-SQ-VSIKTVWGYGFKLIKEDK
114 HHSearch 86.0433%-109 - C6 -2GWR MTRA_MYCTU A:[7-228] --RI-LVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQ---ALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRAD-S---G-V-PIVMLTAKTDTVDV-VLGLESGADDYIMKPFKPKELVARVRARLRR-NDDEPA----EMLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGY-R--A-D-TRLVNVHVQRLRAKV-EKDPENP-TVVLTVRGVGYKAGPP--
20 PsiBlast_PDB 84.9932%-116 - C6 -2GWR MTRA_MYCTU A:[8-224] ----ILVVDDDASLAEMLTIVLRGEGFDTAVIGDGTQ---ALTAVRELRPDLVLLDLMLPGMNGIDVCRVLRAD-S---G-V-PIVMLTAKTDTVDV-VLGLESGADDYIMKPFKPKELVARVRARLRR-NDDEPAE----MLSIADVEIDVPAHKVTRNGEQISLTPLEFDLLVALARKPRQVFTRDVLLEQVWGYR---A-D-TRLVNVHVQRLRAKVEKDPE-NP-TVVLTVRGVGYKAGPP--
112 HHSearch 84.5332%-101 - C6 -1YS7 PRRA_MYCTU A:[9-232] --RV-LVVDDDSDVLASLERGLRLSGFEVATAVDGAE---ALRSATENRPDAIVLDINMPVLDGVSVVTALRAMDN---D-V-PVCVLSARSSVDDR-VAGLEAGADDYLVKPFVLAELVARVKALLRR-RGSTATSSS-ETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGY-DFA--D-TNVVDVFIGYLRRKL-EAG---P-RLLHTVRGVGFVLRMQ--
7 PsiBlast_PDB 83.9534%-122 - C5 -1KGS ? A:[5-220] ----VLVVEDERDLADLITEALKKEMFTVDVCYDGEE---GMYMALNEPFDVVILDIMLPVHDGWEILKSMRES-GV--N-T-PVLMLTAL-SDVEYRVKGLNMGADDYLPKPFDLRELIARVRALIRR----KSESKS-TKLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLVMNKNRVVTKEELQEHLW------V-F-SDVLRSHIKNLRKKV-DKGF-KK-KIIHTVRGIGYVARDE--
118 HHSearch 81.4133%-110 - C5 -1KGS ? A:[4-224] --RV-LVVEDERDLADLITEALKKEMFTVDVCYDGEE---GMYMALNEPFDVVILDIMLPVHDGWEILKSMRESGV---N-T-PVLMLTALSDVEYR-VKGLNMGADDYLPKPFDLRELIARVRALIRR-KSESKS----TKLVCGDLILDTATKKAYRGSKEIDLTKKEYQILEYLVMNKNRVVTKEELQEHLW------V-F-SDVLRSHIKNLRKKV-DKGF-KK-KIIHTVRGIGYVARDE--
22 PsiBlast_CBE 79.9434%-103 - C6 -1YS7 PRRA_MYCTU B:[27-230] ---------------------LRLSGFEVATAVDGAE---ALRSATENRPDAIVLDINMPVLDGVSVVTALRAM-D---NDV-PVCVLSARSSVDDR-VAGLEAGADDYLVKPFVLAELVARVKALLRR-RGSTATSSS-ETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGY-DFAA-D-TNVVDVFIGYLRRKL-EAGG--P-RLLHTVRGVGFVLRMQ--
21 PsiBlast_CBE 79.9133%-117 - C5 -4KNY KDPE_ECOLI B:[6-207] ----VLIVEDEQAIRRFLRTALEGDG--MRVFEAETLQRGLLEA-ATRKPDLIILDLGLPDGDGIEFIRDLRQW-S---A-V-PVIVLSARSEESDK-IAALDAGADDYLSKPFGIGELQARLRVALRR--HSATTAPD-PLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGP-N-AV-EHSHYLRIYMGHLRQKL-EQDP-AR-PRHFITETGIGYRFML--
5 PsiBlast_PDB 79.3834%-100 - C6 -1YS7 PRRA_MYCTU A:[27-230] ---------------------LRLSGFEVATAVDGAE---ALRSATENRPDAIVLDINMPVLDGVSVVTALRAM-D---NDV-PVCVLSARSSVDDR-VAGLEAGADDYLVKPFVLAELVARVKALLRR-RGSTATSSS-ETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGY-DFA--D-TNVVDVFIGYLRRKL-EAG---P-RLLHTVRGVGFVLRMQ--
2 PsiBlast_PDB 79.1733%-112 - C5 -4KNY KDPE_ECOLI A:[6-207] ----VLIVEDEQAIRRFLRTALEGDG--MRVFEAETLQRGLLEA-ATRKPDLIILDLGLPDGDGIEFIRDLRQW-S---A-V-PVIVLSARSEESDK-IAALDAGADDYLSKPFGIGELQARLRVALRR--H----APD-PLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGP-N-AV-EHSHYLRIYMGHLRQKL-EQDP-AR-PRHFITETGIGYRFML--
4 PsiBlast_PDB 79.1334%-100 - C6 -1YS6 PRRA_MYCTU A:[27-230] ---------------------LRLSGFEVATAVDGAE---ALRSATENRPDAIVLDINMPVLDGVSVVTALRAM-D---NDV-PVCVLSAR--VDDR-VAGLEAGADDYLVKPFVLAELVARVKALLRR-RGSTATSSS-ETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGY-DFAA-D-TNVVDVFIGYLRRKL-EAGG-GP-RLLHTVRGVGFVLRMQ--
23 PsiBlast_CBE 78.9134%-100 - C6 -1YS6 PRRA_MYCTU B:[27-230] ---------------------LRLSGFEVATAVDGAE---ALRSATENRPDAIVLDINMPVLDGVSVVTALRAM-D---NDV-PVCVLSARSSVDDR-VAGLEAGADDYLVKPFVLAELVARVKALLRR-RGSTATSSS-ETITVGPLEVDIPGRRARVNGVDVDLTKREFDLLAVLAEHKTAVLSRAQLLELVWGY-DFAA-D-TNVVDVFIGYLRRKL-EAGG-GP-RLLHTVRGVGFVLRMQ--
1 PsiBlast_PDB 78.6231% -96 - C6 -2OQR REGX3_MYCTU A:[4-228] -ATSVLIVEDEESLADPLAFLLRKEGFEATVVTDGPA---ALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRAR-S---S-V-PVIMVTARDSEIDK-VVGLELGADDYVTKPYSARELIARIRAVLRRGGDDDSEMSD-GVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGA-D-YVGD-TKTLDVHVKRLRSKI-EADP-ANPVHLVTVRGLGYKLE----
3 PsiBlast_PDB 78.3133%-108 - C5 -4KFC - KDPE_ECOLI A:[6-207] ----VLIVEDEQAIRRFLRTALEGDG--MRVFEAETLQRGLLEA-ATRKPDLIILDLGLPDGDGIEFIRDLRQW-S---A-V-PVIVLSARSEESDK-IAALDAGADDYLSKPFGIGELQARLRVALRR--HS---APD-PLVKFSDVTVDLAARVIHRGEEEVHLTPIEFRLLAVLLNNAGKVLTQRQLLNQVWGP-N-AV-EHSHYLRIYMGHLRQKL-EQDP-AR-PRHFITATGIGYRFML--
116 HHSearch 76.4031% -92 - C6 -2OQR REGX3_MYCTU A:[6-229] --SV-LIVEDEESLADPLAFLLRKEGFEATVVTDGPA---ALAEFDRAGADIVLLDLMLPGMSGTDVCKQLRAR-S---S-V-PVIMVTARDSEIDK-VVGLELGADDYVTKPYSARELIARIRAVLRR-GGDDDSEMSDGVLESGPVRMDVERHVVSVNGDTITLPLKEFDLLEYLMRNSGRVLTRGQLIDRVWGA-DYVG-D-TKTLDVHVKRLRSKI-EADPANP-VHLVTVRGLGYKLE----
13 PsiBlast_PDB 70.6542%-134 - C5 -1NXX - ? A:[2-118] --KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGRE---ALEQFEAEQPDIIILDL----IDGLEVAKTIRKT-S---S-V-PILMLSAKDSEFDK-VIGLELGADDYVTKPFSNRELQARVKALLRR-S--------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 69.9542%-138 - C5 -1NXO - ? A:[2-118] --KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGRE---ALEQFEAEQPDIIILDLM---IDGLEVAKTIRKT-S---S-V-PILMLSAKDSEFDK-VIGLELGADDYVTKPFSNRELQARVKALLRR-SQ-------------------------------------------------------------------------------------------------------------------
28 PsiBlast_CBE 69.7436%-141 - C5 -2IYN PHOB_ECOLI C:[3-122] --RRILVVEDEAPIREMVCFVLEQNGFQPVEAEDYDS---AVNQLNEPWPDLILLDWMLPGGSGIQFIKHLKRE-SMTRD-I-PVVMLTA-------------TGADDYITKPFSPKELVARIKAVMRR----------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 69.1142%-129 - C5 -1NXS - ? A:[2-118] --KKILIVDDEKPISDIIKFNMTKEGYEVVTAFNGRE---ALEQFEAEQPDIIILD--LPEIDGLEVAKTIRKT-S---S-V-PILMLSAKDSEFDK-VIGLELGADDYVTKPFSNRELQARVKALLRR-SQ-------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 69.0040%-124 - C5 -1MVO PHOP_BACSU A:[2-122] MNKKILVVDDEESIVTLLQYNLERSGYDVITASDGEE---ALKKAETEKPDLIVLDVMLPKLDGIEVCKQLRQQ-K---L-MFPILMLTAKDEEFDK-VLGLELGADDYMTKPFSPREVNARVKAILRR-S--------------------------------------------------------------------------------------------------------------------
24 PsiBlast_CBE 68.7141%-129 - C5 -2ZWM YYCF_BACSU B:[2-119] -DKKILVVDDEKPIADILEFNLRKEGYEVHCAHDGNE---AVEMVEELQPDLILLDIMLPNKDGVEVCREVRKK-Y---D-M-PIIMLTAKDSEIDK-VIGLEIGADDYVTKPFSTRELLARVKANLRR-QL-------------------------------------------------------------------------------------------------------------------