@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu00870: (2016-06-02 )
MAKTKSKFICQSCGYESPKWMGKCPGCGAWNTMVEEMIKKAPANRRAAFSHSVQTVQKPSPITSIETSEEPRVKTQLGEFNRVLGGGVVKGSLVLIGGDPGIGKSTLLLQVSAQLSGSSNSVLYISGEESVKQTKLRADRLGINNPSLHVLSETDMEYISSAIQEMNPSFVVVDSIQTVYQSDITSAPGSVSQVRECTAELMKIAKTKGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEMGIFEMREEGLTEVLNPSEIFLEERSAGSAGSSITASMEGTRPILVEIQALISPTSFGNPRRMATGIDHNRVSLLMAVLEKRVGLLLQNQDAYLKVAGGVKLDEPAIDLAIVISIASSFRDTPPNPADCFIGEVGLTGEVRRVSRIEQRVKEAAKLGFKRMIIPAANLDGWTKPKGIEVIGVANVAEALRTSLGG
Atome Classification :
(20 SA)
.........10........20........30........40........50........60........70........80........90........100.......110.....----------..-120.......--130........-------------.140..----.---------.-----.------------------------.-----------------------.----------------------150----------.---------..--..-------..---160---.----.----.---.--.------...170.......180....---.---..190.......200.......-210....--..-----.220.-----....---..230.......240...---------.--.----..250.......260.-.......270........280.......290.......300----....-------------...310......-.320.......----330.......340.......350.......360--...-.....370.......380.......390.......400.......410.......420.-----......430..---.....-440.......450......---------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MAK
T
K
S
K
F
I
C
Q
SCGYESPKWMGKCPGCG
A
W
N
T
M
V
E
E
M
I
K
KAPANR
R
A
A
FSHSVQTVQKPSPITSIETSEEP
R
V
K
T
Q
L
G
E
F
N
R
V
LGGG
V
V
K
G
S
L
V
L
IGGDPGIGK
S
T
L
L
L
Q
V
S
A
Q
LSG----------SS-N
S
V
L
Y
ISGEE--
S
--
V
K
Q
T
K
L
R
A
-------------
D
RLGIN----N---------P-----
S
------------------------
L
-----------------------
H
----------------------
V
LS----------E---------T
D
--
M
E
-------
Y
I
---
S
S
----
A
----
I
----
Q
---E--M------NP
S
F
V
V
V
D
S
I
Q
T
V
Y
Q
SDITS---A---P
G
S
V
S
Q
V
R
E
C
T
A
E
L
M
K
I
A
KTKG-
I
P
I
F
I
V
G
--
H
V-----TKEGS-----IA
G
P
---
R
L
L
E
H
M
V
D
T
V
L
Y
FEGER
H
---------
H
--
T
----
F
R
I
L
R
A
V
K
N
RFGS-TN-EM
G
I
F
E
M
R
E
-
E
G
L
T
E
VL
N
P
S
E
I
F
L
EERSAGSAGS
S
I
T
ASME----GT
R
P
-------------
I
L
V
E
I
Q
A
L
ISPT-SFGNP
R
R
M
ATG----ID
H
N
R
V
S
L
L
M
A
V
L
E
K
R
V
G
L
L
LQNQD
A
Y
L
K
V
AG---GVK-LDEPAID
L
A
I
V
I
S
I
A
S
S
FRDTPP
N
P
A
D
C
F
I
GEVGL
T
G
E
V
R
R
V
S
R
I
E
Q
R
V
K
E
A
A
KLGF
K
R
-----
M
I
I
PAANLDGW---TKPK
G
-
I
E
V
I
G
V
A
N
V
A
E
A
L
R
T
SLGG---------------------------------------------------
34
Fugue
84.33
16%
-66
- C1 -
1TF7
4
KAIC_SYNE7
A:
[14-497]
-----------------------------------------------------------------
E
H
Q
A
I
A
K
M
R
T
M
I
E
G
F
D
D
I
S
H
G
G
L
P
I
G
R
S
T
L
V
S
G
T
S
G
T
G
K
T
L
F
S
I
Q
F
L
Y
N
G
I
I
----------
E
F
D
E
P
G
V
F
V
T
F
E
E
--
T
--
P
Q
D
I
I
K
N
A
-------------
R
S
F
G
W
D
----
L
---------
A
-----
K
------------------------
L
-----------------------
V
D
E
GK
L
F
I
L
D
ASPDP
E
G
Q
E
VVGG
F
D
L
----------
S
---------
A
L
--
I
E
-------
R
I
---
N
Y
----
A
----
I
----
Q
---
K
--
Y
------
R
A
R
R
V
S
I
D
S
V
-----
T
S
V
F
Q
---
Q
---
Y
D
A
S
S
V
V
R
R
E
L
F
R
L
V
A
R
L
K
Q
I
G
A
T
T
V
M
T
T
E
--
R
I
-----
E
E
Y
G
P
-----
I
A
R
Y
---
G
V
E
E
F
V
S
D
N
V
V
I
L
R
N
V
L
E
---------
G
E
R
R
----
R
R
T
L
E
I
L
K
L
R
G
T
S
H
M
K
-
G
E
Y
P
F
T
I
T
D
-
H
G
I
N
I
F
P
L
G
A
M
R
L
T
Q
R
S
S
N
V
R
V
S
S
G
V
V
R
L
D
E
M
C
G
G
G
F
F
K
D
S
I
I
L
A
T
G
A
TGTG
K
T
L
L
V
S
R
F
V
E
N
A
-
C
A
N
K
E
R
A
I
L
F
A
----
Y
E
E
S
R
A
Q
L
L
R
N
A
Y
S
W
G
M
D
F
E
E
M
E
R
Q
N
L
L
K
I
V
C
---
A
Y
P
-
E
S
A
G
L
E
D
H
L
Q
I
I
K
S
E
I
N
----
D
F
K
P
A
R
I
A
I
D
S
L
S
A
L
A
R
G
V
S
N
N
A
F
R
Q
F
V
I
G
V
T
G
Y
A
K
Q
E
E
I
T
G
L
F
T
N
T
S
D
Q
F
M
G
A
---
H
S
I
T
D
-
S
H
I
S
T
I
T
D
T
I
I
L
L
Q
Y
V
E
I
R
G
E
M
S
R
A
I
N
VFKMRGSWHDKAI
R
E
F
M
I
S
DK
G
P
D
I
K
D
S
FRNFERIISG
S
P
T
R
I
44
HHSearch
79.24
24%
-81
* C1 *
2CVH
-
RADB_THEKO
A:
[1-219]
-----------------------------------------------------------------------
M
L
S
T
G
T
K
S
L
D
S
L
L
G
G
G
F
A
P
G
V
L
T
Q
V
Y
G
P
Y
A
S
G
K
T
T
L
A
L
Q
T
G
L
L
-------------
S
G
-
K
K
V
A
Y
V
D
T
E
G
GF
S
--
P
E
R
L
V
Q
M
A
-------------
E
T
R
G
L
N
----
P
---------
E
E
A
L
S
-
R
------------------------
F
-----------------------
I
----------------------
L
F
T
----------
P
---------
S
D
--
F
K
-------
E
Q
R
R
V
I
G
----
S
----
L
----
K
KTV
D
--
S
------
N
F
A
L
V
V
V
D
S
I
T
A
H
Y
R
A
E
E
N
----
R
---
S
G
L
I
A
E
L
S
R
Q
L
Q
V
L
L
W
I
A
R
K
H
N
-
I
P
V
I
V
I
N
--
Q
V
-----
H
F
D
S
R
TEMTK
P
V
A
E
---
Q
T
L
G
Y
R
C
K
D
I
L
R
L
D
K
L
P
K
---------
P
--
G
----
L
R
V
A
V
L
E
R
H
R
F
R
P
-
E
G
-
L
M
A
Y
F
R
I
T
E
-
R
G
I
E
D
V
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
Fugue
78.72
23%
-95
- C1 -
2CVH
-
RADB_THEKO
A:
[1-220]
-----------------------------------------------------------------------
M
L
S
T
G
T
K
S
L
D
S
L
L
G
G
G
F
A
P
G
V
L
T
Q
V
Y
G
P
Y
A
S
G
K
T
T
L
A
L
Q
T
G
L
L
S
G
--------------
K
K
V
A
Y
V
D
T
E
G
--
G
--
F
S
P
E
R
L
V
Q
M
A
E
T
R
GLN
P
E
E
A
L
S
R
F
I
L
F
----
T
---------
P
-----
S
------------------------
D
-----------------------
F
----------------------
K
E
Q
----------
R
---------
R
V
--
I
G
-------
S
L
---
K
K
----
T
----
V
----
D
---
S
---------
N
F
A
L
V
V
V
D
S
I
T
A
H
Y
R
A
E
E
N
R
-------
S
G
L
I
A
E
L
S
R
Q
L
Q
V
L
L
W
I
A
R
K
H
N
-
I
P
V
I
V
I
N
--
Q
V
H
FDSR
T
E
M
T
K
-----
P
V
A
E
---
Q
T
L
G
Y
R
C
K
D
I
L
R
L
D
K
L
P
K
---------
P
--
G
----
L
R
V
A
V
L
E
R
H
R
F
R
P
-
E
G
-
L
M
A
Y
F
R
I
T
E
-
R
G
I
E
D
V
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48
HHSearch
77.95
24%
-85
- C1 -
2DR3
2
Y284_PYRHO
A:
[3-239]
----------------------------------------------------------------------
R
R
V
K
T
G
I
P
G
V
D
E
I
L
H
G
G
I
P
E
R
N
V
V
L
L
S
G
G
P
G
T
G
K
T
I
F
S
Q
Q
F
L
W
N
G
L
K
----------
M
G
-
E
P
G
I
Y
V
A
L
E
E
--
H
--
P
V
Q
V
R
Q
N
M
-------------
A
Q
F
G
W
D
----
V
---------
K
-----
P
------------------------
Y
E
E
K
GM
F
A
M
V
D
AFTAGIGKEYEKY
I
----------------------
V
H
D
----------
L
---------
T
D
--
I
R
-------
E
F
---
I
E
V
L
R
Q
A
----
I
----
R
---
D
--
I
------
N
A
K
R
V
V
V
D
S
V
T
T
L
Y
I
N
K
-------------
P
A
M
A
R
S
I
I
L
Q
L
K
R
V
L
A
G
T
G
-
C
T
S
I
F
V
S
--
Q
V
-----
S
---------
G
F
G
----
P
G
V
E
H
G
V
D
G
I
I
R
L
D
L
D
E
I
DG-------
E
--
L
----
K
R
S
L
I
V
W
K
M
R
G
T
S
-
H
S
M
R
R
H
P
F
D
I
T
D
-
K
G
I
I
V
Y
P
D
K
V
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
59
HHSearch
76.71
19%
-101
- C1 -
1NLF
1
REPJ_ECOLX
A:
[10-265]
---------------------------------------------------------------------
L
E
A
F
A
A
A
P
P
P
L
D
Y
V
L
P
N
-
M
V
A
G
T
V
G
A
L
V
S
P
G
G
A
G
K
S
M
L
A
L
Q
L
A
A
Q
I
A
G
GPDLLEV
G
E
L
P
T
-
G
P
V
I
Y
L
P
A
E
D
--
P
--
P
T
A
I
H
H
R
L
-------------
H
A
L
G
A
H
----
L
S
A
E
E
R
Q
A
V
A
D
-----
G
------------------------
L
-----------------------
L
----------------------
I
Q
P
LIGSLPNIMA
P
---------
E
W
--
F
D
-------
G
L
---
K
R
----
A
----
A
-----------
E
------
G
R
R
L
M
V
L
D
T
L
R
R
F
H
I
E
E
----------
E
N
A
S
G
P
M
A
Q
V
I
G
R
M
E
A
I
A
A
D
T
G
-
C
S
I
V
F
L
H
--
H
A
-----------------------
V
L
V
D
N
I
R
W
Q
S
Y
L
S
S
M
T
S
A
E
A
E
E
W
GVD
D
--
D
QRRF
F
V
R
F
G
V
S
K
A
N
Y
G
A
-
P
F
-
A
D
R
W
F
R
R
H
D
-
G
G
V
L
K
P
A
V
L
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
76.25
23%
-82
- C1 -
2CVH
-
RADB_THEKO
A:
[9-219]
-------------------------------------------------------------------------------
L
D
S
L
L
G
G
G
F
A
P
G
V
L
T
Q
V
Y
G
P
Y
A
S
G
K
T
T
L
A
L
Q
-
T
G
L
L
S
G
----------
K
K
-
V
A
Y
V
D
T
E
G
G
F
--
S
--
P
E
R
L
V
Q
M
A
-------------
E
T
R
G
L
N
----
P
---------
E
-----
E
A
L
S
R
--------------------
F
-----------------------
I
----------------------
L
F
T
----------
P
---------
S
D
--
F
K
-------
E
Q
---
R
R
----
V
----
I
----
G
---
S
--
L
K
KTVDS
N
F
A
L
V
V
V
D
S
I
T
A
H
Y
R
A
E
-
E
N
---
R
---
S
G
L
I
A
E
L
S
R
Q
L
Q
V
L
L
W
I
A
R
K
H
N
-
I
P
V
I
V
I
N
Q
V
H
F
-----
D
S
R
T
E
-----
M
T
K
P
VAE
Q
T
L
G
Y
R
C
K
D
I
L
R
L
D
K
L
P
K
---------
P
--
G
----
L
R
V
A
V
L
E
R
H
R
F
R
P
-
E
G
-
L
M
A
Y
F
R
I
T
E
-
R
G
I
E
D
V
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
73.29
23%
-82
- C1 -
2CVF
-
RADB_THEKO
A:
[9-219]
-------------------------------------------------------------------------------
L
D
S
L
L
G
G
G
F
A
P
G
V
L
T
Q
V
Y
G
P
Y
A
S
G
K
T
T
L
A
L
Q
-
T
G
L
L
S
G
----------
K
K
-
V
A
Y
V
D
T
E
G
G
F
--
S
--
P
E
R
L
V
Q
M
A
-------------
E
T
R
G
L
N
----
P
---------
E
-----
E
A
L
S
R--------------------
F
-----------------------
I
----------------------
L
F
T
----------
P
---------
S
D
--
F
K
-------
E
Q
---
R
R
----
V
----
I
----
G
---
S
--
L
K
KTVDS
N
F
A
L
V
V
V
D
S
I
T
A
H
Y
R
A
E
-
E
N
---
R
---
S
G
L
I
A
E
L
S
R
Q
L
Q
V
L
L
W
I
A
R
K
H
N
-
I
P
V
I
V
I
N
QV
H
F
-----
D
S
R
T
E
-----
M
T
K
P
VAE
Q
T
L
G
Y
R
C
K
D
I
L
R
L
D
K
L
P
K
---------
P
--
G
----
L
R
V
A
V
L
E
R
H
R
F
R
P
-
E
G
-
L
M
A
Y
F
R
I
T
E
-
R
G
I
E
D
V
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
72.66
29%
-98
- C2 -
1Z0E
-
LONB_ARCFU
A:
[441-600]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
V
L
P
I
I
A
E
V
T
P
S
M---
E
G
R
V
I
A
T
G
RL
Q
E
I
A
R
E
A
V
M
N
V
S
A
I
I
K
K
Y
T
G
R
D
I
S
N
M
D
V
H
I
Q
F
V
G
TYE
G
V
E
-
G
D
S
A
S
I
S
I
A
T
--
A
V
I
S
A
I
E
G
I
P
V
D
Q
S
V
A
M
T
G
S
L
S
V
K
G
E
V
L
P
V
G
G
V
T
Q
K
I
E
A
A
I
Q
A
G
L
K
K
-----
V
I
I
P
K
D
N
I
D
D
V
LLD
A
E
H
E
G
K
I
E
V
I
P
V
S
R
I
N
E
V
L
E
H
V
L
-----------------------------------------------------
3
PsiBlast_PDB
72.55
29%
-98
- C2 -
1Z0G
-
LONB_ARCFU
A:
[441-600]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
V
L
P
I
I
A
E
V
T
P
S
M---
E
G
R
V
I
A
T
G
RL
Q
E
I
A
R
E
A
V
M
N
V
S
A
I
I
K
K
Y
T
G
R
D
I
S
N
M
D
V
H
I
Q
F
V
G
T
Y
E
G
V
E
-
G
D
S
A
S
I
S
I
A
T
--
A
V
I
S
A
I
E
G
I
P
V
D
Q
S
V
A
M
T
G
S
L
S
V
K
G
E
V
L
P
V
G
G
V
T
Q
K
I
E
A
A
I
Q
A
G
L
K
K
-----
V
I
I
P
K
D
N
I
D
D
V
LLD
A
E
H
E
G
K
I
E
V
I
P
V
S
R
I
N
E
V
L
E
H
V
L
-----------------------------------------------------
8
PsiBlast_PDB
72.47
26%
-110
- C2 -
1Z0C
-
LONB_ARCFU
A:
[441-600]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
V
L
P
I
I
A
E
V
T
P
S
M---
E
G
R
V
I
A
T
G
RL
Q
E
I
A
R
E
A
V
M
N
V
S
A
I
I
K
K
Y
T
G
R
D
I
S
N
M
D
V
H
I
Q
F
V
G
---
T
Y
E
G
V
E
G
A
S
A
S
I
S
I
A
T
A
V
I
S
A
I
E
G
I
P
V
D
Q
S
V
A
M
T
G
S
L
S
V
K
G
E
V
L
P
V
G
G
V
T
Q
K
I
E
A
A
I
Q
A
G
L
K
K
-----
V
I
I
P
K
D
N
I
D
D
V
LLD
A
E
H
E
G
K
I
E
V
I
P
V
S
R
I
N
E
V
L
E
H
V
L
-----------------------------------------------------
7
PsiBlast_PDB
71.30
29%
-94
- C2 -
1Z0B
2
A:
[27-186]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
V
L
P
I
I
A
E
V
T
P
S
M---
E
G
R
V
I
A
T
G
RL
Q
E
I
A
R
E
A
V
M
N
V
S
A
I
I
K
K
Y
T
G
R
D
I
S
N
M
D
V
H
I
Q
F
V
G
TYE
G
V
A
-
G
D
S
A
S
I
S
I
A
T
--
A
V
I
S
A
I
E
G
I
P
V
D
Q
S
V
A
M
T
G
S
L
S
V
K
G
E
V
L
P
V
G
G
V
T
Q
K
I
E
A
A
I
Q
A
G
L
K
K
-----
V
I
I
P
K
D
N
I
D
D
V
L
L
D
A
E
H
E
G
K
I
E
V
I
P
V
S
R
I
N
E
V
L
E
H
V
L
-----------------------------------------------------
6
PsiBlast_PDB
70.86
29%
-97
- C2 -
1Z0W
2
A:
[27-186]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
V
L
P
I
I
A
E
V
T
P
S
M---
E
G
R
V
I
A
T
G
RL
Q
E
I
A
R
E
A
V
M
N
V
S
A
I
I
K
K
Y
T
G
R
D
I
S
N
M
D
V
H
I
Q
F
V
G
TYE
G
V
E
-
G
D
S
A
S
I
S
I
A
T
--
A
V
I
S
A
I
E
G
I
P
V
D
Q
S
V
A
M
T
G
S
L
S
V
K
G
E
V
L
P
V
G
G
V
T
Q
K
I
E
A
A
I
Q
A
G
L
K
K
-----
V
I
I
P
K
D
N
I
D
D
V
L
L
D
A
E
H
E
G
K
I
E
V
I
P
V
S
R
I
N
E
V
L
E
H
V
L
-----------------------------------------------------
4
PsiBlast_PDB
70.83
29%
-98
- C2 -
1Z0T
-
LONB_ARCFU
A:
[441-600]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
V
L
P
I
I
A
E
V
T
P
S
M---
E
G
R
V
I
A
T
G
RL
Q
E
I
A
R
E
A
V
M
N
V
S
A
I
I
K
K
Y
T
G
R
D
I
S
N
M
D
V
H
I
Q
F
V
G
TYE
G
V
E
-
G
D
S
A
S
I
S
I
A
T
--
A
V
I
S
A
I
E
G
I
P
V
D
Q
S
V
A
M
T
G
S
L
S
V
K
G
E
V
L
P
V
G
G
V
T
Q
K
I
E
A
A
I
Q
A
G
L
K
K
-----
V
I
I
P
K
D
N
I
D
D
V
LLD
A
E
H
E
G
K
I
E
V
I
P
V
S
R
I
N
E
V
L
E
H
V
L
-----------------------------------------------------
5
PsiBlast_PDB
70.60
29%
-98
- C2 -
1Z0V
-
LONB_ARCFU
A:
[441-600]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
V
L
P
I
I
A
E
V
T
P
S
M---
E
G
R
V
I
A
T
G
RL
Q
E
I
A
R
E
A
V
M
N
V
S
A
I
I
K
K
Y
T
G
R
D
I
S
N
M
D
V
H
I
Q
F
V
G
TYE
G
V
E
-
G
D
S
A
S
I
S
I
A
T
--
A
V
I
S
A
I
E
G
I
P
V
D
Q
S
V
A
M
T
G
S
L
S
V
K
G
E
V
L
P
V
G
G
V
T
Q
K
I
E
A
A
I
Q
A
G
L
K
K
-----
V
I
I
P
K
D
N
I
D
D
V
L
L
D
A
E
H
E
G
K
I
E
V
I
P
V
S
R
I
N
E
V
L
E
H
V
L
-----------------------------------------------------
53
HHSearch
69.73
18%
-84
- C1 -
2W0M
5
?
A:
[3-233]
----------------------------------------------------------------------
S
R
L
S
T
G
I
L
D
F
D
K
L
I
Q
G
G
I
P
Q
G
F
F
I
A
L
T
G
E
P
G
T
G
K
T
I
F
S
L
H
F
I
A
K
G
L
R
----------
D
G
-
D
P
C
I
Y
V
T
T
E
E
--
S
--
R
D
S
I
I
R
Q
A
-------------
K
Q
F
N
W
D
----
F
---------
E
EYIEK
K
------------------------
L
-----------------------
I
----------------------
I
I
D
----------
A
LMDQWSLVN
L
T
--
P
E
-------
E
L
---
V
N
----
K
----
V
I
E
A
K
Q
---
K
L
G
Y
------
G
K
A
R
L
V
I
D
S
V
S
A
L
F
L
D
K
-------------
P
A
M
A
R
K
I
S
Y
Y
L
K
R
V
L
N
K
W
N
-
F
T
I
Y
A
T
S
--
Q
------------------------
G
V
E
H
V
A
D
G
I
I
R
F
R
R
M
I
R
NG-------
E
--
L
----
H
R
Y
I
L
I
E
K
M
R
Q
T
D
-
H
D
K
H
V
W
E
I
D
I
V
N
G
K
G
I
V
L
K
G
R
L
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
57
HHSearch
68.93
20%
-81
- C1 -
3LDA
2
RAD51_YEAST
A:
[156-396]
--------------------------------------------------------------------
E
L
I
C
L
T
T
G
S
K
N
L
D
T
L
L
G
G
G
V
E
T
G
S
I
T
E
L
F
G
E
F
R
T
G
K
S
Q
L
C
H
T
L
A
V
T
C
Q
I
PLDIGG----
G
E
-
G
K
C
L
Y
I
D
T
E
G
--
T
FR
P
V
R
L
V
S
I
A
-------------
Q
R
F
G
L
D
P
D
D
A
L
---------
N
-----
N
------------------------
V
-----------------------
A
----------------------
Y
A
R
----------
A
---------
Y
N
--
A
D
H
Q
L
R
L
L
D
A
A
---
A
Q
----
M
----
M
----
S
---
E
--
S
------
R
F
S
L
I
V
V
D
S
V
M
A
L
Y
R
-----GE-
L
---
S
A
R
Q
M
H
L
A
K
F
M
R
A
L
Q
R
L
A
D
Q
F
G
-
V
A
V
V
V
T
N
--
Q
V
----------------------
N
I
M
A
Y
S
S
T
T
R
L
G
F
K
K
G
K
----------
G
--
C
----
Q
R
L
C
K
V
V
D
S
P
C
L
P
-
E
--
A
E
C
V
F
A
I
Y
E
-
D
G
V
G
D
P
R
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
56
HHSearch
68.68
17%
-88
- C1 -
4HYY
-
DMC1_HUMAN
A:
[96-338]
-------------------------------------------------------------------
K
M
V
F
H
I
T
T
G
S
Q
E
F
D
K
L
L
G
G
G
I
E
S
M
A
I
T
E
A
F
G
E
F
R
T
G
K
T
Q
L
S
H
T
L
C
V
T
A
Q
L
PGAGGY----
P
G
-
G
K
I
I
F
I
D
T
E
N
TF
R
--
P
D
R
L
R
D
I
A
-------------
D
R
F
N
V
D
----
H
D
A
V
L
-----
D
-----
N
------------------------
V
-----------------------
L
----------------------
Y
A
R
----------
A
---------
Y
T
--
S
E
H
Q
M
----
E
L
---
L
D
----
Y
V
A
A
K
F
----
H
E
E-
A
--
G
------
I
F
K
L
L
I
I
D
S
I
M
A
L
F
R
V
D
F
S
G
---
R
GEL
A
E
R
Q
Q
K
L
A
Q
M
L
S
R
L
Q
K
I
S
E
E
Y
N
-
V
A
V
F
V
T
N
--
Q
M
-----
T
----K----
P
I
G
G
---
H
I
L
A
H
A
S
T
T
R
I
S
L
R
K
G
R
----------
G
--
E
----
L
R
I
A
K
I
Y
D
S
P
E
M
P
-
E
N
--
E
A
T
F
A
I
T
A
-
G
G
I
G
D
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
55
HHSearch
68.53
19%
-79
- C1 -
2Z43
-
RADA_SULSO
A:
[84-323]
-------------------------------------------------------------------
M
N
V
K
K
I
S
T
G
S
Q
A
L
D
G
L
L
A
G
G
I
E
T
R
T
M
T
E
F
F
G
E
F
G
S
G
K
T
Q
L
C
H
Q
L
S
V
N
V
Q
L
PPEKGG----
L
S
-
G
K
A
V
Y
I
D
T
E
G
--
T
FR
W
E
R
I
E
N
M
A
-------------
K
A
L
G
L
D
----
I
D
N
V
M
-----
N
-----
N
------------------------
I
-----------------------
Y
----------------------
Y
I
R
----------
A
---------
I
N
--
T
D
H
Q
I
A
I
V
D
D
L
---
Q
E
----
L
----
V
----
S
K
--
D
--
P
------
S
I
K
L
I
V
V
D
S
V
T
S
H
F
R
A
E
Y
P
G
REN
L
---
A
V
R
Q
Q
K
L
N
K
H
L
H
Q
L
T
R
L
A
E
V
Y
D
-
I
A
V
I
I
T
N
--
Q
V
-----------------------------
G
I
R
I
Q
L
K
K
S
R
----------
G
--
N
----
R
R
I
A
R
V
V
D
A
P
H
L
P
-
E
G
--
E
V
V
F
A
L
T
E
-
E
G
I
R
D
A
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
58
HHSearch
66.55
18%
-84
- C1 -
1V5W
-
DMC1_HUMAN
A:
[96-339]
-------------------------------------------------------------------
K
M
V
F
H
I
T
T
G
S
Q
E
F
D
K
L
L
G
G
G
I
E
S
M
A
I
T
E
A
F
G
E
F
R
T
G
K
T
Q
L
S
H
T
L
C
V
T
A
Q
L
PGAGGY----
P
G
-
G
K
I
I
F
I
D
T
E
N
TF
R
--
P
D
R
L
R
D
I
A
-------------
D
R
F
N
V
D
----
H
D
A
V
L
-----
D
-----
N
------------------------
V
-----------------------
L
----------------------
Y
A
R
----------
A
---------
Y
T
--
S
E
H
Q
M
E
L
L
D
Y
V
---
A
A
----
K
----
F
----
H
E
E-
A
--
G
------
I
F
K
L
L
I
I
D
S
I
M
A
L
F
R
V
D
F
S
G
RGE
L
---
A
E
R
Q
Q
K
L
A
Q
M
L
S
R
L
Q
K
I
S
E
E
Y
N
-
V
A
V
F
V
T
N
--
Q
M
------------------
G
---
H
I
L
A
H
A
S
T
T
R
I
S
L
R
K
G
R
----------
G
--
E
----
L
R
I
A
K
I
Y
D
S
P
E
M
P
-
E
N
--
E
A
T
F
A
I
T
A
-
G
G
I
G
D
A
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
65.86
23%
-95
- C1 -
2DR3
1
Y284_PYRHO
A:
[4-195]
-----------------------------------------------------------------------
R
V
K
T
G
I
P
G
V
D
E
I
L
H
G
G
I
P
E
R
N
V
V
L
L
S
G
G
P
G
T
G
K
T
I
F
S
Q
Q
F
L
W
N
G
L
K
----------
M
G
-
E
P
G
I
Y
V
A
L
E
E
--
H
--
P
V
Q
V
R
Q
N
M
-------------
A
Q
F
G
W
D
V---
K
---------
P
-----
Y
E
E
K
GM
F
A
M
V
D
AFTAGIGKEYEKYI
V
-----------------------
H
----------------------
D
L
T
----------
D
---------
I
R
E
F
I
E
-------
V
L
---
R
Q
----
A
----
I
----
R
---
D
--
I
------
N
A
K
R
V
V
V
D
S
V
T
T
L
Y
I
N
K
P
A
M
---
A
---
R
S
I
I
L
Q
L
K
R
V
------
L
A
G
T
G
C
-
T
S
I
F
V
S
Q
--
V
S
---------
G
-----
F
G
-
P
---
G
-
V
E
H
G
V
D
G
I
I
R
L
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------