@TOME V2.3
(Nov 2016)

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : bsu00870: (2016-06-02 )
MAKTKSKFICQSCGYESPKWMGKCPGCGAWNTMVEEMIKKAPANRRAAFSHSVQTVQKPSPITSIETSEEPRVKTQLGEFNRVLGGGVVKGSLVLIGGDPGIGKSTLLLQVSAQLSGSSNSVLYISGEESVKQTKLRADRLGINNPSLHVLSETDMEYISSAIQEMNPSFVVVDSIQTVYQSDITSAPGSVSQVRECTAELMKIAKTKGIPIFIVGHVTKEGSIAGPRLLEHMVDTVLYFEGERHHTFRILRAVKNRFGSTNEMGIFEMREEGLTEVLNPSEIFLEERSAGSAGSSITASMEGTRPILVEIQALISPTSFGNPRRMATGIDHNRVSLLMAVLEKRVGLLLQNQDAYLKVAGGVKLDEPAIDLAIVISIASSFRDTPPNPADCFIGEVGLTGEVRRVSRIEQRVKEAAKLGFKRMIIPAANLDGWTKPKGIEVIGVANVAEALRTSLGG

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90........100.......110.....----------..-120.......--130........-------------.140..----.---------.-----.------------------------.-----------------------.----------------------150----------.---------..--..-------..---160---.----.----.---.--.------...170.......180....---.---..190.......200.......-210....--..-----.220.-----....---..230.......240...---------.--.----..250.......260.-.......270........280.......290.......300----....-------------...310......-.320.......----330.......340.......350.......360--...-.....370.......380.......390.......400.......410.......420.-----......430..---.....-440.......450......---------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MAKTKSKFICQSCGYESPKWMGKCPGCGAWNTMVEEMIKKAPANRRAAFSHSVQTVQKPSPITSIETSEEPRVKTQLGEFNRVLGGGVVKGSLVLIGGDPGIGKSTLLLQVSAQLSG----------SS-NSVLYISGEE--S--VKQTKLRA-------------DRLGIN----N---------P-----S------------------------L-----------------------H----------------------VLS----------E---------TD--ME-------YI---SS----A----I----Q---E--M------NPSFVVVDSIQTVYQSDITS---A---PGSVSQVRECTAELMKIAKTKG-IPIFIVG--HV-----TKEGS-----IAGP---RLLEHMVDTVLYFEGERH---------H--T----FRILRAVKNRFGS-TN-EMGIFEMRE-EGLTEVLNPSEIFLEERSAGSAGSSITASME----GTRP-------------ILVEIQALISPT-SFGNPRRMATG----IDHNRVSLLMAVLEKRVGLLLQNQDAYLKVAG---GVK-LDEPAIDLAIVISIASSFRDTPPNPADCFIGEVGLTGEVRRVSRIEQRVKEAAKLGFKR-----MIIPAANLDGW---TKPKG-IEVIGVANVAEALRTSLGG---------------------------------------------------
34 Fugue 84.3316% -66 - C1 -1TF7 KAIC_SYNE7 A:[14-497] -----------------------------------------------------------------EHQAIAKMRTMIEGFDDISHGGLPIGRSTLVSGTSGTGKTLFSIQFLYNGII----------EFDEPGVFVTFEE--T--PQDIIKNA-------------RSFGWD----L---------A-----K------------------------L-----------------------VDEGKLFILDASPDPEGQEVVGGFDL----------S---------AL--IE-------RI---NY----A----I----Q---K--Y------RARRVSIDSV-----TSVFQ---Q---YDASSVVRRELFRLVARLKQIGATTVMTTE--RI-----EEYGP-----IARY---GVEEFVSDNVVILRNVLE---------GERR----RRTLEILKLRGTSHMK-GEYPFTITD-HGINIFPLGAMRLTQRSSNVRVSSGVVRLDEMCGGGFFKDSIILATGATGTGKTLLVSRFVENA-CANKERAILFA----YEESRAQLLRNAYSWGMDFEEMERQNLLKIVC---AYP-ESAGLEDHLQIIKSEIN----DFKPARIAIDSLSALARGVSNNAFRQFVIGVTGYAKQEEITGLFTNTSDQFMGA---HSITD-SHISTITDTIILLQYVEIRGEMSRAINVFKMRGSWHDKAIREFMISDKGPDIKDSFRNFERIISGSPTRI
44 HHSearch 79.2424% -81 * C1 *2CVH - RADB_THEKO A:[1-219] -----------------------------------------------------------------------MLSTGTKSLDSLLGGGFAPGVLTQVYGPYASGKTTLALQTGLL-------------SG-KKVAYVDTEGGFS--PERLVQMA-------------ETRGLN----P---------EEALS-R------------------------F-----------------------I----------------------LFT----------P---------SD--FK-------EQRRVIG----S----L----KKTVD--S------NFALVVVDSITAHYRAEEN----R---SGLIAELSRQLQVLLWIARKHN-IPVIVIN--QV-----HFDSRTEMTKPVAE---QTLGYRCKDILRLDKLPK---------P--G----LRVAVLERHRFRP-EG-LMAYFRITE-RGIEDV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 Fugue 78.7223% -95 - C1 -2CVH - RADB_THEKO A:[1-220] -----------------------------------------------------------------------MLSTGTKSLDSLLGGGFAPGVLTQVYGPYASGKTTLALQTGLLSG--------------KKVAYVDTEG--G--FSPERLVQMAETRGLNPEEALSRFILF----T---------P-----S------------------------D-----------------------F----------------------KEQ----------R---------RV--IG-------SL---KK----T----V----D---S---------NFALVVVDSITAHYRAEENR-------SGLIAELSRQLQVLLWIARKHN-IPVIVIN--QVHFDSRTEMTK-----PVAE---QTLGYRCKDILRLDKLPK---------P--G----LRVAVLERHRFRP-EG-LMAYFRITE-RGIEDVE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48 HHSearch 77.9524% -85 - C1 -2DR3 Y284_PYRHO A:[3-239] ----------------------------------------------------------------------RRVKTGIPGVDEILHGGIPERNVVLLSGGPGTGKTIFSQQFLWNGLK----------MG-EPGIYVALEE--H--PVQVRQNM-------------AQFGWD----V---------K-----P------------------------YEEKGMFAMVDAFTAGIGKEYEKYI----------------------VHD----------L---------TD--IR-------EF---IEVLRQA----I----R---D--I------NAKRVVVDSVTTLYINK-------------PAMARSIILQLKRVLAGTG-CTSIFVS--QV-----S---------GFG----PGVEHGVDGIIRLDLDEIDG-------E--L----KRSLIVWKMRGTS-HSMRRHPFDITD-KGIIVYPDKVL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
59 HHSearch 76.7119%-101 - C1 -1NLF REPJ_ECOLX A:[10-265] ---------------------------------------------------------------------LEAFAAAPPPLDYVLPN-MVAGTVGALVSPGGAGKSMLALQLAAQIAGGPDLLEVGELPT-GPVIYLPAED--P--PTAIHHRL-------------HALGAH----LSAEERQAVAD-----G------------------------L-----------------------L----------------------IQPLIGSLPNIMAP---------EW--FD-------GL---KR----A----A-----------E------GRRLMVLDTLRRFHIEE----------ENASGPMAQVIGRMEAIAADTG-CSIVFLH--HA-----------------------VLVDNIRWQSYLSSMTSAEAEEWGVDD--DQRRFFVRFGVSKANYGA-PF-ADRWFRRHD-GGVLKPAVL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 76.2523% -82 - C1 -2CVH - RADB_THEKO A:[9-219] -------------------------------------------------------------------------------LDSLLGGGFAPGVLTQVYGPYASGKTTLALQ-TGLLSG----------KK-VAYVDTEGGF--S--PERLVQMA-------------ETRGLN----P---------E-----EALSR--------------------F-----------------------I----------------------LFT----------P---------SD--FK-------EQ---RR----V----I----G---S--LKKTVDSNFALVVVDSITAHYRAE-EN---R---SGLIAELSRQLQVLLWIARKHN-IPVIVINQVHF-----DSRTE-----MTKPVAEQTLGYRCKDILRLDKLPK---------P--G----LRVAVLERHRFRP-EG-LMAYFRITE-RGIEDV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 73.2923% -82 - C1 -2CVF - RADB_THEKO A:[9-219] -------------------------------------------------------------------------------LDSLLGGGFAPGVLTQVYGPYASGKTTLALQ-TGLLSG----------KK-VAYVDTEGGF--S--PERLVQMA-------------ETRGLN----P---------E-----EALSR--------------------F-----------------------I----------------------LFT----------P---------SD--FK-------EQ---RR----V----I----G---S--LKKTVDSNFALVVVDSITAHYRAE-EN---R---SGLIAELSRQLQVLLWIARKHN-IPVIVINQVHF-----DSRTE-----MTKPVAEQTLGYRCKDILRLDKLPK---------P--G----LRVAVLERHRFRP-EG-LMAYFRITE-RGIEDV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 72.6629% -98 - C2 -1Z0E - LONB_ARCFU A:[441-600] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVLPIIAEVTPSM---EGRVIATGRLQEIAREAVMNVSAIIKKYTGRDISNMDVHIQFVGTYEGVE-GDSASISIAT--AVISAIEGIPVDQSVAMTGSLSVKGEVLPVGGVTQKIEAAIQAGLKK-----VIIPKDNIDDVLLDAEHEGKIEVIPVSRINEVLEHVL-----------------------------------------------------
3 PsiBlast_PDB 72.5529% -98 - C2 -1Z0G - LONB_ARCFU A:[441-600] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVLPIIAEVTPSM---EGRVIATGRLQEIAREAVMNVSAIIKKYTGRDISNMDVHIQFVGTYEGVE-GDSASISIAT--AVISAIEGIPVDQSVAMTGSLSVKGEVLPVGGVTQKIEAAIQAGLKK-----VIIPKDNIDDVLLDAEHEGKIEVIPVSRINEVLEHVL-----------------------------------------------------
8 PsiBlast_PDB 72.4726%-110 - C2 -1Z0C - LONB_ARCFU A:[441-600] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVLPIIAEVTPSM---EGRVIATGRLQEIAREAVMNVSAIIKKYTGRDISNMDVHIQFVG---TYEGVEGASASISIATAVISAIEGIPVDQSVAMTGSLSVKGEVLPVGGVTQKIEAAIQAGLKK-----VIIPKDNIDDVLLDAEHEGKIEVIPVSRINEVLEHVL-----------------------------------------------------
7 PsiBlast_PDB 71.3029% -94 - C2 -1Z0B A:[27-186] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVLPIIAEVTPSM---EGRVIATGRLQEIAREAVMNVSAIIKKYTGRDISNMDVHIQFVGTYEGVA-GDSASISIAT--AVISAIEGIPVDQSVAMTGSLSVKGEVLPVGGVTQKIEAAIQAGLKK-----VIIPKDNIDDVLLDAEHEGKIEVIPVSRINEVLEHVL-----------------------------------------------------
6 PsiBlast_PDB 70.8629% -97 - C2 -1Z0W A:[27-186] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVLPIIAEVTPSM---EGRVIATGRLQEIAREAVMNVSAIIKKYTGRDISNMDVHIQFVGTYEGVE-GDSASISIAT--AVISAIEGIPVDQSVAMTGSLSVKGEVLPVGGVTQKIEAAIQAGLKK-----VIIPKDNIDDVLLDAEHEGKIEVIPVSRINEVLEHVL-----------------------------------------------------
4 PsiBlast_PDB 70.8329% -98 - C2 -1Z0T - LONB_ARCFU A:[441-600] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVLPIIAEVTPSM---EGRVIATGRLQEIAREAVMNVSAIIKKYTGRDISNMDVHIQFVGTYEGVE-GDSASISIAT--AVISAIEGIPVDQSVAMTGSLSVKGEVLPVGGVTQKIEAAIQAGLKK-----VIIPKDNIDDVLLDAEHEGKIEVIPVSRINEVLEHVL-----------------------------------------------------
5 PsiBlast_PDB 70.6029% -98 - C2 -1Z0V - LONB_ARCFU A:[441-600] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IVLPIIAEVTPSM---EGRVIATGRLQEIAREAVMNVSAIIKKYTGRDISNMDVHIQFVGTYEGVE-GDSASISIAT--AVISAIEGIPVDQSVAMTGSLSVKGEVLPVGGVTQKIEAAIQAGLKK-----VIIPKDNIDDVLLDAEHEGKIEVIPVSRINEVLEHVL-----------------------------------------------------
53 HHSearch 69.7318% -84 - C1 -2W0M ? A:[3-233] ----------------------------------------------------------------------SRLSTGILDFDKLIQGGIPQGFFIALTGEPGTGKTIFSLHFIAKGLR----------DG-DPCIYVTTEE--S--RDSIIRQA-------------KQFNWD----F---------EEYIEKK------------------------L-----------------------I----------------------IID----------ALMDQWSLVNLT--PE-------EL---VN----K----VIEAKQ---KLGY------GKARLVIDSVSALFLDK-------------PAMARKISYYLKRVLNKWN-FTIYATS--Q------------------------GVEHVADGIIRFRRMIRNG-------E--L----HRYILIEKMRQTD-HDKHVWEIDIVNGKGIVLKGRL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
57 HHSearch 68.9320% -81 - C1 -3LDA RAD51_YEAST A:[156-396] --------------------------------------------------------------------ELICLTTGSKNLDTLLGGGVETGSITELFGEFRTGKSQLCHTLAVTCQIPLDIGG----GE-GKCLYIDTEG--TFRPVRLVSIA-------------QRFGLDPDDAL---------N-----N------------------------V-----------------------A----------------------YAR----------A---------YN--ADHQLRLLDAA---AQ----M----M----S---E--S------RFSLIVVDSVMALYR-----GE-L---SARQMHLAKFMRALQRLADQFG-VAVVVTN--QV----------------------NIMAYSSTTRLGFKKGK----------G--C----QRLCKVVDSPCLP-E--AECVFAIYE-DGVGDPR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
56 HHSearch 68.6817% -88 - C1 -4HYY - DMC1_HUMAN A:[96-338] -------------------------------------------------------------------KMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGY----PG-GKIIFIDTENTFR--PDRLRDIA-------------DRFNVD----HDAVL-----D-----N------------------------V-----------------------L----------------------YAR----------A---------YT--SEHQM----EL---LD----YVAAKF----HEE-A--G------IFKLLIIDSIMALFRVDFSG---RGELAERQQKLAQMLSRLQKISEEYN-VAVFVTN--QM-----T----K----PIGG---HILAHASTTRISLRKGR----------G--E----LRIAKIYDSPEMP-EN--EATFAITA-GGIGDA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
55 HHSearch 68.5319% -79 - C1 -2Z43 - RADA_SULSO A:[84-323] -------------------------------------------------------------------MNVKKISTGSQALDGLLAGGIETRTMTEFFGEFGSGKTQLCHQLSVNVQLPPEKGG----LS-GKAVYIDTEG--TFRWERIENMA-------------KALGLD----IDNVM-----N-----N------------------------I-----------------------Y----------------------YIR----------A---------IN--TDHQIAIVDDL---QE----L----V----SK--D--P------SIKLIVVDSVTSHFRAEYPGRENL---AVRQQKLNKHLHQLTRLAEVYD-IAVIITN--QV-----------------------------GIRIQLKKSR----------G--N----RRIARVVDAPHLP-EG--EVVFALTE-EGIRDAE--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
58 HHSearch 66.5518% -84 - C1 -1V5W - DMC1_HUMAN A:[96-339] -------------------------------------------------------------------KMVFHITTGSQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTLCVTAQLPGAGGY----PG-GKIIFIDTENTFR--PDRLRDIA-------------DRFNVD----HDAVL-----D-----N------------------------V-----------------------L----------------------YAR----------A---------YT--SEHQMELLDYV---AA----K----F----HEE-A--G------IFKLLIIDSIMALFRVDFSGRGEL---AERQQKLAQMLSRLQKISEEYN-VAVFVTN--QM------------------G---HILAHASTTRISLRKGR----------G--E----LRIAKIYDSPEMP-EN--EATFAITA-GGIGDAK--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 65.8623% -95 - C1 -2DR3 Y284_PYRHO A:[4-195] -----------------------------------------------------------------------RVKTGIPGVDEILHGGIPERNVVLLSGGPGTGKTIFSQQFLWNGLK----------MG-EPGIYVALEE--H--PVQVRQNM-------------AQFGWDV---K---------P-----YEEKGMFAMVDAFTAGIGKEYEKYIV-----------------------H----------------------DLT----------D---------IREFIE-------VL---RQ----A----I----R---D--I------NAKRVVVDSVTTLYINKPAM---A---RSIILQLKRV------LAGTGC-TSIFVSQ--VS---------G-----FG-P---G-VEHGVDGIIRLD---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------