@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : bsu01170: (2016-06-02 )
MPKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYSYKLPKKVRRLAIKSVLSSKVIDNNIIVLEDLTLDTAKTKEMAAILKGLSVEKKALIVTADANEAVALSARNIPGVTVVEANGINVLDVVNHEKLLITKAAVEKVEEVLA

Atome Classification :

(20 SA) .........10........20........30........40........50........60........70........80........90...-.....100.......110.......120..----.....130.......140......-.-150.....---..----.---.160---.......170......---------------.---------------180.......190.......200.....
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MPKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTP-RSYSYKLPKKVRRLAIKSVLSSKVIDNNII----VLEDLTLDTAKTKEMAAILKGLSV-E-K--KALIV---TA----D---ANEA---VALSARNIPGVTVVEA---------------N---------------GINVLDVVNHEKLLITKAAVEKVEEVLA
1 PsiBlast_PDB 90.48100%-108 - C2 -3J3V - RL4_BACSU E:[2-207] -PKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTP-RSYSYKLPKKVRRLAIKSVLSSKVIDNNII----VLEDLTLDTAKTKEMAAILKGLSV-E-K--KALIV---TA----D---ANEA---VALSARNIPGVTVVEA---------------N---------------GINVLDVVNHEKLLITKAAVEKVEEVLA
27 HHSearch 86.45100% -92 - C2 -3J3W - RL4_BACSU E:[2-207] -PKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTP-RSYSYKLPKKVRRLAIKSVLSSKVIDNNII----VLEDLTLDTAKTKEMAAILKGLSV-E-K--KALIV---TA----D---ANEA---VALSARNIPGVTVVEA---------------N---------------GINVLDVVNHEKLLITKAAVEKVEEVLA
2 PsiBlast_PDB 86.45100% -92 - C2 -3J3W - RL4_BACSU E:[2-207] -PKVALYNQNGSTAGDIELNASVFGIEPNESVVFDAILMQRASLRQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTP-RSYSYKLPKKVRRLAIKSVLSSKVIDNNII----VLEDLTLDTAKTKEMAAILKGLSV-E-K--KALIV---TA----D---ANEA---VALSARNIPGVTVVEA---------------N---------------GINVLDVVNHEKLLITKAAVEKVEEVLA
28 HHSearch 75.8842%-110 - C2 -5GAE - RL4_ECOLI E:[1-201] -MELVLKD----AQSALTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLI----VVEKFSVEAPKTKLLAQKLKDMAL-E-D---VLII---TG----E---LDEN---LFLAARNLHKVDVRDA---------------T---------------GIDPVSLIAFDKVVMTADAVKQVEEMLA
19 PsiBlast_PDB 74.3343%-109 - C2 -5GAG - RL4_ECOLI E:[12-201] ----------------LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLI----VVEKFSVEAPKTKLLAQKLKDMAL-E----DVLII---TG----E---LDEN---LFLAARNLHKVDVRDA---------------T---------------GIDPVSLIAFDKVVMTADAVKQVEEMLA
20 PsiBlast_PDB 73.7543%-111 - C2 -5GAH - RL4_ECOLI E:[12-201] ----------------LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLI----VVEKFSVEAPKTKLLAQKLKDMAL-E----DVLII---TG----E---LDEN---LFLAARNLHKVDVRDA---------------T---------------GIDPVSLIAFDKVVMTADAVKQVEEMLA
17 PsiBlast_PDB 73.2443%-111 - C2 -5GAD - RL4_ECOLI E:[12-201] ----------------LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLI----VVEKFSVEAPKTKLLAQKLKDMAL-E----DVLII---TG----E---LDEN---LFLAARNLHKVDVRDA---------------T---------------GIDPVSLIAFDKVVMTADAVKQVEEMLA
18 PsiBlast_PDB 73.0543%-107 - C2 -5GAE - RL4_ECOLI E:[12-201] ----------------LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLI----VVEKFSVEAPKTKLLAQKLKDMAL-E----DVLII---TG----E---LDEN---LFLAARNLHKVDVRDA---------------T---------------GIDPVSLIAFDKVVMTADAVKQVEEMLA
33 HHSearch 72.5834% -97 - C2 -3J7Y - RM04_HUMAN F:[68-274] ----SLRGFEQERVGLADLHPDVFATAPRLDILHQVAMWQKNFKRISYAKTKTRAEVRGGGRKPWPQKGTGRARHGSIRSPLWRGGGVAHGPRGPTSYYYMLPMKVRALGLKVALTVKLAQDDLH----IMDSLELPTGDPQYLTELAHYRRW-G-D--SVLLV---DL----THEEMPQS---IVEATSRLKTFNLIPA---------------V---------------GLNVHSMLKHQTLVLTLPTVAFLEDKLL
32 HHSearch 71.4739% -80 - C2 -5DM6 - RL4_DEIRA C:[3-198] --QINVIGQNGGR--TIELPLP----EVNSGVLHEVVTWQLASRRRGTASTRTRAQVSKTGRKMYGQKGTGNARHGDRSVPTFVGGGVAFGPKP-RSYDYTLPRQVRQLGLAMAIASRQEGGKLV----AVDGFDIADAKTKNFISWAKQNGL-D-GTEKVLLV---T---------DDEN---TRRAARNVSWVSVLPV---------------A---------------GVNVYDILRHDRLVIDAAALEIVEE---
30 HHSearch 70.7148%-137 - C2 -1DMG RL4_THEMA A:[1-225] -AQVDLLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLS------------------------------------------------------DWSKKLNKKMKKLALRSALSVKYRENKLL----VLDDLKLERPKTKSLKEILQNLQL-S-DK-KTLIV---LP----WKEEGYMN---VKLSGRNLPDVKVIIADNPNNSKNGEKAVRID---------------GLNVFDMLKYDYLVLTRDMVSKIEEVLG
21 PsiBlast_CBE 70.4245%-141 - C2 -1DMG RL4_THEMA A:[2-225] --QVDLLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLS------------------------------------------------------DWSKKLNKKMKKLALRSALSVKYRENKLL----VLDDLKLERPKTKSLKEILQNLQLSD-K--KTLIV---LP----W---KEEGYMNVKLSGRNLPDVKVIIADNPNNSKNGEKAVRID---------------GLNVFDMLKYDYLVLTRDMVSKIEEVLG
11 PsiBlast_PDB 69.1143% -88 - C2 -4CSU - RL4_ECOLI E:[12-201] ----------------LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLI----VVEKFSVEAPKTKLLAQKLKDMAL-E----DVLII---TG----E---LDEN---LFLAARNLHKVDVRDA---------------T---------------GIDPVSLIAFDKVVMTADAVKQVEEMLA
16 PsiBlast_PDB 68.9543%-102 - C2 -5ADY - RL4_ECOLI E:[12-201] ----------------LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLI----VVEKFSVEAPKTKLLAQKLKDMAL-E----DVLII---TG----E---LDEN---LFLAARNLHKVDVRDA---------------T---------------GIDPVSLIAFDKVVMTADAVKQVEEMLA
14 PsiBlast_PDB 68.3043% -95 - C2 -3J8G - RL4_ECOLI E:[12-201] ----------------LTVSETTFGRDFNEALVHQVVVAYAAGARQGTRAQKTRAEVTGSGKKPWRQKGTGRARSGSIKSPIWRSGGVTFAARP-QDHSQKVNKKMYRGALKSILSELVRQDRLI----VVEKFSVEAPKTKLLAQKLKDMAL-E----DVLII---TG----E---LDEN---LFLAARNLHKVDVRDA---------------T---------------GIDPVSLIAFDKVVMTADAVKQVEEMLA
41 Fugue 68.0838%-136 - C2 -1DMG RL4_THEMA A:[1-225] -AQVDLLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQL------------------------------------------------------SDWSKKLNKKMKKLALRSALSVKYRENKLL----VLDDLKLERPKTKSLKEILQNLQL-S-D--KKTLI---VLPWKEE---GYMN---VKLSGRNLPDVKVIIADNPNNSKNGEKAVRID---------------GLNVFDMLKYDYLVLTRDMVSKIEEVLG
26 HHSearch 66.9760% -28 * C2 *4WFA - RL4_STAA8 C:[3-201] --NYDVLKLDGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPWKQKGTGRARQGTIRAPQWRGGGIVFGPTP-RSYAYKMPKKMRRLALRSALSFKAQENGLT----VVDAFNFEAPKTKEFKNVLSTLEQ-P-K--KVLVV---TE----N---EDVN---VELSARNIPGVQVTTA---------------Q---------------GLNVLDITNADSLVITEAAAKK------
5 PsiBlast_PDB 66.2562% -24 - C2 -4WFA - RL4_STAA8 C:[10-201] ---------DGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPWKQKGTGRARQGTIRAPQWRGGGIVFGPTP-RSYAYKMPKKMRRLALRSALSFKAQENGLT----VVDAFNFEAPKTKEFKNVLSTLEQ-P-K--KVLVV---TE----N---EDVN---VELSARNIPGVQVTTA---------------Q---------------GLNVLDITNADSLVITEAAAKK------
42 Fugue 65.9241%-128 - C2 -1DMG RL4_THEMA A:[1-225] -AQVDLLNVKGEKVGTLEISDFVFNIDPNYDVMWRYVDMQLSD------------------------------------------------------WSKKLNKKMKKLALRSALSVKYRE----NKLLVLDDLKLERPKTKSLKEILQNLQL-SDK--KTLIVLPWKE----E---GYMN---VKLSGRNLPDVKVIIA---------------DNPNNSKNGEKAVRIDGLNVFDMLKYDYLVLTRDMVSKIEEVLG
6 PsiBlast_PDB 65.8862% -30 - C2 -4WFB - RL4_STAA8 C:[10-201] ---------DGTKSGSIELSDAVFGIEPNNSVLFEAINLQRASLRQGTHAVKNRSAVSGGGRKPWKQKGTGRARQGTIRAPQWRGGGIVFGPTP-RSYAYKMPKKMRRLALRSALSFKAQENGLT----VVDAFNFEAPKTKEFKNVLSTLEQ-P-K--KVLVV---TE----N---EDVN---VELSARNIPGVQVTTA---------------Q---------------GLNVLDITNADSLVITEAAAKK------