@TOME V2.3
(Nov 2016)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu02019: (2016-06-03 )
MNIICLKKSSKRLSTSQAVLVTDIADTGITAAAGADIIAATAAVRAKEDTTTVMAAVIVTNAGATAAVNPKKVLVPLLGQGFFYVTD
Atome Classification :
(20 SA)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20.......-.30..-....-..40........50........60........70--.........80......---------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------M
N
I
I
C
LKKSSKRLSTS
Q
A
V
L
V
T
DIADTG-ITAAA-GA
D
I
-
I
A
A
T
A
A
VRAKEDT
T
T
V
M
A
A
V
I
V
TNAGATAAVN
P
---
K
K
V
L
V
P
LLGQ
G
F
F
Y
VTD---------------------------------------------------------------------------------------------------------------
35
Fugue
90.13
25%
-101
- C10 -
1SQJ
-
CBHRE_GEOS1
A:
[4-786]
Y
E
F
K
N
VAIGGGGYIT
G
I
V
A
H
PKTKDL
L
Y
A
R
T
DI
G
G
A
Y
R
W
D
AGTS
K
W
I
P
LNDFIEAQDMNIMGTE
S
I
A
L
D
PNNPD
R
L
Y
L
A
Q
G
R
Y
VGDE
W
A
A
F
Y
V
S
EDRGQ
S
F
T
I
Y
E
S
P
F
P
M
G
ANDMGRNNGER
L
A
V
N
PFNSN
E
V
W
M
GTRTE
G
I
W
K
S
SDRAK
T
W
T
N
VTSIPDAFTNGIGYT
S
V
I
F
DPERNG
T
I
Y
A
S
A
TAPQG
M
Y
V
T
HDGGV
S
W
E
P
VAGQPSSWLNRTTGAFPDKKPASIAPQPM
K
V
A
L
T
PN
F
L
Y
V
T
Y
A
DYPGPWGVT
F
G
E
V
W
R
Q
NRTSG
A
W
D
D
ITPRVGNSSPAPYNNQTFPA
G
G
F
C
GLSVDATNPN
R
L
V
V
I
T
L
DRDPGPA
L
D
S
I
Y
L
S
TDAGATWKD
V
T
Q
L
S
SPSNLEGNWGHPTNAARYKDGTPVPWLDFNNGPQWGGYGAPHGTPGLTKFGWWMSAVLIDPFNPE
H
L
M
Y
G
T
GA
T
I
W
A
T
DTLSRVEKDWAP
S
W
Y
L
QIDG
I
E
E
N
A
I
LSLRSPKSGAA
L
L
S
G
I
G
DISGMKHDDLT
K
P
Q
K
M
FGAPQFSNLD
S
I
D
A
A
GNFPN
V
V
V
R
A
G
S
S
GHEYDSACARGAYATDGGD
A
W
T
I
FPTCPPGMNASHYQ
G
S
T
I
A
V
D
ASGS
Q
I
V
W
S
TKLDEQAS
G
P
W
Y
S
HDYGK
T
W
S
V
P
A
G
D
L
K
A
Q
T
A
N
V
L
S
D
K
------
V
Q
D
G
T
-
F
Y
A
T
D
-
G
G
K
F
-
F
V
S
T
D
G
G
K
----
S
Y
A
A
K
G
A
G
L
V
T
G
T
S
L
M
P
A
V
N
P
WVA
G
D
V
W
V
P
V
P
E
G
G
L
F
H
S
T
D
FGA
S
F
T
R
V
G
TANAT
L
V
S
V
G
A
P
KAPS
A
V
F
I
W
G
TDKPGSDI
G
L
Y
R
S
DDNGS
T
W
T
R
VNDQEHNYSGPT
M
I
E
A
D
PKVYG
R
V
Y
L
G
T
NGR
G
I
V
Y
A
D
L
T
NE
E
K
S
T
A
K
C
ANGQKGTHCY
14
PsiBlast_PDB
76.04
32%
-79
- C8 -
3AD9
-
?
A:
[298-359]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
V
S
E
L
A
A
S
G
G
V
V
A
V
I
-
D
A
R
Q
-
N
I
S
A
A
A
A
Q
A
V
T
D
G
V
T
V
L
T
G
S
V
V
A
N
T
E
A
D
A
S
G
E
L
---
S
A
V
L
V
A
T
L
D
E
----------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
75.42
32%
-89
- C8 -
3AD7
-
?
A:
[298-359]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
V
S
E
L
A
A
S
G
G
V
V
A
V
I
-
D
A
R
Q
-
N
I
S
A
A
A
A
Q
A
V
T
D
G
V
T
V
L
T
G
S
V
V
A
N
T
E
A
D
A
S
G
E
L
---
S
A
V
L
V
A
T
L
D
E
----------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
75.31
32%
-87
- C8 -
3ADA
-
?
A:
[298-359]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
V
S
E
L
A
A
S
G
G
V
V
A
V
I
-
D
A
R
Q
-
N
I
S
A
A
A
A
Q
A
V
T
D
G
V
T
V
L
T
G
S
V
V
A
N
T
E
A
D
A
S
G
E
L
---
S
A
V
L
V
A
T
L
D
E
----------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
74.37
32%
-82
- C8 -
1VRQ
1
?
A:
[298-359]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
V
S
E
L
A
A
S
G
G
V
V
A
V
I
-
D
A
R
Q
-
N
I
S
A
A
A
A
Q
A
V
T
D
G
V
T
V
L
T
G
S
V
V
A
N
T
E
A
D
A
S
G
E
L
---
S
A
V
L
V
A
T
L
D
E
----------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
74.28
32%
-84
- C8 -
1X31
-
?
A:
[298-359]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
V
S
E
L
A
A
S
G
G
V
V
A
V
I
-
D
A
R
Q
-
N
I
S
A
A
A
A
Q
A
V
T
D
G
V
T
V
L
T
G
S
V
V
A
N
T
E
A
D
A
S
G
E
L
---
S
A
V
L
V
A
T
L
D
E
----------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
74.05
32%
-84
- C8 -
3AD8
-
?
A:
[298-359]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
V
S
E
L
A
A
S
G
G
V
V
A
V
I
-
D
A
R
Q
-
N
I
S
A
A
A
A
Q
A
V
T
D
G
V
T
V
L
T
G
S
V
V
A
N
T
E
A
D
A
S
G
E
L
---
S
A
V
L
V
A
T
L
D
E
----------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
69.73
34%
-120
* C9 *
3FW6
-
?
A:
[438-483]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
D
T
S
-
V
T
A
T
A
P
N
P
D
N
-
V
S
A
F
A
A
V
R
S
S
D
G
A
L
T
V
M
V
I
N
K
Y
L
S
G
N
T
P
A
T
I
N
------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
69.16
34%
-106
- C9 -
3II1
-
?
A:
[438-483]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
D
T
S
-
V
T
A
T
A
P
N
P
D
N
-
V
S
A
F
A
A
V
R
S
S
D
G
A
L
T
V
M
V
I
N
K
Y
L
S
G
N
T
P
A
T
I
N
------------------------------------------------------------------------------------------------------------------------------------
19
PsiBlast_PDB
62.71
30%
-46
- C8 -
2I0K
2
?
A:
[108-179]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
T
A
G
A
-
G
A
S
I
-
E
A
I
V
T
E
L
Q
K
H
D
L
G
W
A
N
L
P
A
P
G
V
L
S
I
G
G
A
L
A
V
N
A
---
H
G
A
A
L
P
A
V
G
Q
----------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
62.48
30%
-52
- C8 -
1I19
1
?
A:
[108-175]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
T
A
G
A
-
G
A
S
I
-
E
A
I
V
T
E
L
Q
K
H
D
L
G
W
A
N
L
P
A
P
G
V
L
S
I
G
G
A
L
A
V
N
A
---
H
G
A
A
L
P
A
V
G
Q
----------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
58.16
31%
-45
- C8 -
3HB9
-
?
A:
[300-343]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
I
T
E
M
V
T
G
I
D
I
V
K
T
Q
-
I
L
V
A
A
-
G
A
D
L
-
F
G
E
E
I
N
M
P
Q
Q
K
D
I
T
T
L
G
Y
A
I
------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
57.47
31%
-37
- C8 -
3HBL
-
?
A:
[300-343]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
I
T
E
M
V
T
G
I
D
I
V
K
T
Q
-
I
L
V
A
A
-
G
A
D
L
-
F
G
E
E
I
N
M
P
Q
Q
K
D
I
T
T
L
G
Y
A
I
------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
57.08
31%
-41
- C8 -
4HNU
-
?
A:
[323-366]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
I
T
E
M
V
T
G
I
D
I
V
K
T
Q
-
I
L
V
A
A
-
G
A
D
L
-
F
G
E
E
I
N
M
P
Q
Q
K
D
I
T
T
L
G
Y
A
I
------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
56.86
31%
-24
- C8 -
3HO8
-
?
A:
[300-343]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
I
T
E
M
V
T
G
I
D
I
V
K
T
Q
-
I
L
V
A
A
-
G
A
D
L
-
F
G
E
E
I
N
M
P
Q
Q
K
D
I
T
T
L
G
Y
A
I
------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
56.40
31%
-40
- C8 -
3BG5
-
?
A:
[323-366]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
I
T
E
M
V
T
G
I
D
I
V
K
T
Q
-
I
L
V
A
A
-
G
A
D
L
-
F
G
E
E
I
N
M
P
Q
Q
K
D
I
T
T
L
G
Y
A
I
------------------------------------------------------------------------------------------------------------------------------------------------
27
HHSearch
56.22
40%
-46
- C5 -
2D7U
-
PURA_PYRHO
A:
[39-79]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
N
A
G
H
S
V
V
I
N
G
---
K
K
Y
A
V
R
Q
I
P
T
G
F
M
Q
------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
56.03
31%
-36
- C8 -
4HNT
-
?
A:
[323-366]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
I
T
E
M
V
T
G
I
D
I
V
K
T
Q
-
I
L
V
A
A
-
G
A
D
L
-
F
G
E
E
I
N
M
P
Q
Q
K
D
I
T
T
L
G
Y
A
I
------------------------------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
55.21
40%
-81
- C8 -
3FPL
2
ADH_CLOBE
A:
[131-172]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
N
L
A
I
L
P
K
D
---
M
P
L
E
N
A
V
M
I
T
D
M
M
T
T
G
-
F
H
G
A
E
-
L
A
D
I
E
L
G
A
T
V
A
V
-------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
55.21
31%
-36
- C8 -
4HNV
-
?
A:
[323-366]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
I
T
E
M
V
T
G
I
D
I
V
K
T
Q
-
I
L
V
A
A
-
G
A
D
L
-
F
G
E
E
I
N
M
P
Q
Q
K
D
I
T
T
L
G
Y
A
I
------------------------------------------------------------------------------------------------------------------------------------------------