@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu02070: (2016-06-03 )
MDVTLGYLRESLSNHLENEVCQRICKKMLAKRYANEEEFVKDLDDNEMSFLNHVLEKEIKYAQNEQDQKRAKELNEVYELLL
Atome Classification :
(20 SA)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10......--..20-------.-.......30.-...-.------...40--....----....50..-----------.--.....60.-.-.-.-....70........80.-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MD
V
T
L
G
Y
L
R
E
S
L
S
N
H
L
E
--
N
E
V
C
-------
Q
-
R
I
C
K
K
M
L
A
K
R-YA
N
-
E
------
E
E
F
V
K
--DLDD----
N
E
M
S
F
L
N
H
-----------
V
--
L
E
K
E
I
K
YA-Q-
N
-
E
-
Q
D
Q
K
R
A
K
E
L
N
E
V
Y
E
L
LL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49
Fugue
74.49
22%
-52
- C4 -
1D8B
-
A:
[11-91]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELN
N
L
R
M
T
Y
E
R
L
R
E
L
S
L
N
L
G
N
--
R
M
V
P
PVGNFMP
D
-
S
I
L
K
K
M
A
A
I
L
-
P
M
N
-
D
------
S
A
F
A
T
LG
T
V
E
D
----
K
Y
R
R
R
F
K
Y
--------------
F
K
A
T
I
A
D
L
-
S
-
K
-
K
-
R
S
S
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41
Fugue
72.50
20%
-46
- C2 -
1H6K
-
?
A:
[27-790]
T
E
D
H
L
E
S
L
I
C
K
VGEKSACS
L
E
S
N
L
E
G
L
A
G
V
L
E
A
D
LPNY
K
S
K
I
L
R
L
L
C
T
V
A
R
L
LPEK
L
T
I
Y
T
T
L
V
G
L
L
N
A
R
N
Y
N
F
G
G
E
F
V
E
A
M
I
R
Q
L
K
E
S
L
K
A
NN
Y
N
E
A
V
Y
L
V
R
F
L
S
D
L
V
N
C
HVIA
A
P
S
M
V
A
M
F
E
N
F
V
S
V
T
Q
EEDVP
Q
V
R
R
D
W
Y
V
Y
A
F
L
S
S
LPWV
G
K
E
L
Y
E
K
K
D
A
E
M
D
R
I
F
A
N
T
E
S
Y
L
K
R
RQKTHVPMLQVWTADKPHPQEE
Y
L
D
C
L
W
A
Q
I
Q
K
L
K
K
D
RWQERHILR
P
Y
L
A
F
D
SILCEAL
Q
H
N
L
P
P
FTPPPHTED
S
V
Y
P
M
P
R
V
I
F
R
M
F
DYTDDPEGPVMPGSHS
V
E
R
F
V
I
E
E
N
L
H
C
I
I
K
S
H
WKE
R
K
T
C
A
A
Q
L
V
S
YPGKNKIP
L
N
Y
H
I
V
E
V
I
F
A
E
L
F
QLPAPPHI
D
V
M
Y
T
T
L
L
I
E
L
C
K
L
Q
PGS
L
P
Q
V
L
A
Q
A
T
E
M
L
Y
M
R
L
D
TM
N
T
T
C
-------
V
-
D
R
F
I
N
W
F
S
H
H
-
L
S
N
-
F
QFRWSW
E
D
W
S
D
--
C
L
S
Q
DPES
P
K
P
K
F
V
R
E
-----------
V
--
L
E
K
C
M
R
L
------
S
-
Y
H
Q
R
I
L
D
I
V
P
P
T
F
S
A
L
C
PSNP
T
C
I
Y
KYGDESSNSLPG
H
S
V
A
L
C
L
A
V
A
F
K
S
KAT
N
D
E
I
F
S
I
L
K
D
VPNFN
P
L
K
I
E
V
F
V
Q
T
L
L
H
L
A
AKS
F
S
H
S
F
S
A
L
A
K
F
H
E
V
F
K
T
L
A
ES
D
E
G
K
L
H
V
L
R
V
M
F
E
V
WRNH
P
Q
M
I
A
V
L
V
D
K
M
I
R
T
QIVD
C
A
A
V
A
N
W
I
F
SSELSRDFTR
L
F
V
W
E
I
L
H
S
T
I
R
K
M
N
K
H
V
L
K
I
Q
K
E
L
E
E
A
K
E
KEQ
I
E
R
L
Q
E
K
V
E
S
A
Q
S
E
Q
K
N
L
F
L
V
I
F
Q
R
F
I
M
I
L
T
E
H
L
V
R
C
E
T
D
GTSVLT
P
W
Y
K
N
C
I
E
R
L
Q
Q
I
F
L
Q
H
H
Q
I
I
Q
Q
Y
M
V
T
L
E
N
L
LFTAELD
P
H
I
L
A
V
F
Q
Q
F
C
A
L
QA
33
HHSearch
66.07
24%
-31
- C2 -
2OUO
3
A:
[66-122]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
H
P
M
D
M
------
S
-
T
I
K
S
K
L
E
A
R
E
-
Y
R
D
-
A
------
Q
E
F
G
A
--
D
V
R
------------
L
-----------
M
--
F
S
N
C
Y
K
Y
N
-
P
-
P
D
H
-
E
V
V
A
M
A
R
K
L
Q
D
V
F
E
M
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
65.14
27%
-4
- C2 -
4F52
-
?
A:
[34-114]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
D
T
L
N
Q
V
M
E
K
F
K
K
--
D
--
K
D
V
F
-------
Q
-
K
F
Y
A
K
M
L
A
K
R
-
L
V
H
-
Q
------
N
S
A
S
D
--
D
A
E
A
----
S
M
I
S
K
L
K
Q
-----------
A
CG
F
E
Y
T
S
K
L
Q
-
R
-
M
-
F
-
Q
D
I
G
V
S
K
D
L
N
E
Q
F
K
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42
Fugue
64.57
23%
-40
- C2 -
2GSV
1
YVFG_BACSU
A:
[3-69]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
L
F
S
V
P
Y
F
I
E
N
L
K
Q
H
I
E
M
-
N
Q
S
E
-------
D
-
K
I
------
H
A
M
N
S
Y
-
Y
------
R
S
V
V
S
--
T
L
V
Q
----
D
Q
L
T
---------------------------
K
-
N
-
A
-
V
V
L
K
R
I
Q
H
L
D
E
A
Y
N
K
V
K
R
G-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
PsiBlast_PDB
62.27
40%
-93
- C2 -
5BZU
-
MPT5_YEAST
A:
[431-496]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
L
L
A
E
L
F
N
R
L
S
--
N
E
L
C
-------
Q
-
L
S
C
L
K
F
S
S
N
V
-
V
----------
E
K
F
I
K
--
K
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
61.71
40%
-92
- C2 -
5BYM
1
MPT5_YEAST
A:
[231-299]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
L
L
A
E
L
F
N
R
L
S
--
N
E
L
C
-------
Q
-
L
S
C
L
K
F
S
S
N
V
-
V
----------
E
K
F
I
K
--
K
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
61.06
40%
-93
- C2 -
5BZ1
1
MPT5_YEAST
A:
[231-290]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
L
L
A
E
L
F
N
R
L
S
--
N
E
L
C
-------
Q
-
L
S
C
L
K
F
S
S
N
V
-
V
----------
E
K
F
I
K
--
K
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40
HHSearch
60.77
24%
-17
* C2 *
3MQM
-
ASH1L_HUMAN
A:
[2489-2539]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
-
T
I
E
K
Q
I
L
T
G
Y
-
Y
K
T
-
V
------
E
A
F
D
A
--
D
M
L
------------
K
-----------
V
--
F
R
N
A
E
K
Y
Y
G
R
-
K
-
S
-
P
V
G
R
D
V
C
R
L
R
K
A
Y
Y
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
60.70
40%
-88
- C2 -
5BZV
1
MPT5_YEAST
A:
[231-296]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
L
L
A
E
L
F
N
R
L
S
--
N
E
L
C
-------
Q
-
L
S
C
L
K
F
S
S
N
V
-
V
----------
E
K
F
I
K
--
K
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
60.28
40%
-88
- C2 -
5BZ5
1
MPT5_YEAST
A:
[231-296]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Y
L
L
A
E
L
F
N
R
L
S
--
N
E
L
C
-------
Q
-
L
S
C
L
K
F
S
S
N
V
-
V
----------
E
K
F
I
K
--
K
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
57.94
32%
-32
- C2 -
4XKM
-
XYLA_BACTN
A:
[402-454]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
K
M
L
A
D
R
-
Y
A
S
F
D
------
G
G
K
G
K
--
E
F
E
D
----
G
K
L
T
------------------
L
E
D
V
V
A
Y
A
-
K
-
T
-
K
-
G
E
P
K
Q
T
S
G
K
Q
E
L
Y
E
A
I
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
57.63
35%
2
- C2 -
2VGM
-
DOM34_YEAST
A:
[229-289]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
Q
-
Y
A
E
-
E
------
E
H
N
K
K
--
I
L
D
N
----
K
G
M
F
F
I
A
H
C
STGYL
Q
G
I
N
E
V
--
L
K
N
P
L
-
Y
A
-
S
-
K
-
L
-
Q
D
T
K
Y
S
K
E
I
M
V
M
D
E
F
L
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
57.30
22%
-48
- C2 -
2RDP
2
?
A:
[103-143]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
E
K
G
-------
E
-
R
I
I
E
E
V
I
E
K
R
-
Q
R
D
-
L
------
A
N
V
L
E
--
S
F
S
D
----
E
E
I
V
V
F
E
R
-----------
C
--
L
R
K
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
56.25
12%
-44
- C2 -
4PTB
2
?
A:
[118-167]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
V
K
T
S
L
N
E
Q
M
-
Y
T
R
-
V
------
E
G
F
V
Q
--
D
M
R
------------
L
-----------
I
--
F
H
N
H
K
E
F
Y
-
R
-
E
-
D
-
K
F
T
R
L
G
I
Q
V
Q
D
I
F
E
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
54.31
24%
-12
- C2 -
3NXB
1
CECR2_HUMAN
A:
[60-111]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
-
S
M
E
K
K
L
N
G
G
L
-
Y
C
T
-
K
------
E
E
F
V
N
--
D
M
K
------------
T
-----------
M
--
F
R
N
C
R
K
Y
N
-
G
-
E
-
S
S
E
Y
T
K
M
S
D
N
L
E
R
C
F
H
R
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29
HHSearch
54.03
13%
-27
- C2 -
2GRC
-
SMCA4_HUMAN
A:
[1503-1559]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
P
V
D
-------
F
K
K
I
K
E
R
I
R
N
H
K
-
Y
R
S
-
L
------
N
D
L
E
K
--
D
V
M
------------
L
-----------
L
--
C
Q
N
A
Q
T
F
N
-
L
E
G
-
S
-
L
I
Y
E
D
S
I
V
L
Q
S
V
F
T
S
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
HHSearch
53.46
17%
-21
- C2 -
3LJW
1
PB1_HUMAN
A:
[58-110]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
-
T
I
A
Q
R
I
Q
N
G
S
-
Y
K
S
-
I
------
H
A
M
A
K
--
D
I
D
------------
L
-----------
L
--
A
K
N
A
K
T
Y
N
-
E
P
G
-
S
-
Q
V
F
K
D
A
N
S
I
K
K
I
F
Y
M
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
HHSearch
53.10
17%
-17
- C2 -
5FE6
6
KAT2B_HUMAN
A:
[59-111]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
-
T
M
S
E
R
L
K
N
R
Y
-
Y
V
S
-
K
------
K
L
F
M
A
--
D
L
Q
------------
R
-----------
V
--
F
T
N
C
K
E
Y
N
-
P
P
E
-
S
-
E
Y
Y
K
C
A
N
I
L
E
K
F
F
F
S
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36
HHSearch
52.50
15%
-32
- C2 -
2DAT
-
A:
[59-114]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
V
D
F
------
K
-
K
I
K
E
R
I
R
N
H
K
-
Y
R
S
-
L
------
G
D
L
E
K
--
D
V
M
------------
L
-----------
L
--
C
H
N
A
Q
T
F
N
-
L
E
G
-
S
-
Q
I
Y
E
D
S
I
V
L
Q
S
V
F
K
S
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------