@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu02510: (2016-06-04 )
MAMNLRKNQAPLYIKVHEIDNTAIIVNDGGLPKGTVFSCGLVLEEDVPQGHKVALTDLNQGDEIVRYGEVIGFADETIKRGSWIREALVRMPAPPALDDLPLANRVPQPRPPLEGYTFEGYRNADGSAGTKNILGITTSVQCVVGVLDYAVKRIKEELLPKYPNVDDVVPLHHQYGCGVAINAPDAVIPIRTIQNLAKHPNFGGEVMVIGLGCEKLLPERIASENDDDILSLQDHRGFAAMIQSILEMAEERLIRLNSRTRVSCPVSDLVIGLQCGGSDAFSGVTANPAVGYAADLLVRAGATVLFSEVTEVRDAIHLLTPRAVSEEVGQSLIKEMKWYDSYLRRGDADRSANPSPGNKKGGLSNVVEKALGSVAKSGTSPISGVLGPGERAKQKGLLFAATPASDFVCGTLQLAAGMNLQVFTTGRGTPYGLAAAPVLKVSTRHSLSEHWADLIDINAGRIATGEASIEDVGWEIFRTILDVASGRKQTWADRWGLHNDLCLFNPAPVT
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------.........10........20....---....30.......---.40--....------------.....50....---------...--.60...-.....70.-....--...80-......--..90---........100-------------........110.......120-.......130.......140.......-----150--.-......160......-.170.......180.......190.......200....--------------..-----.---------210-------........220--....--...230.------......240...--.--...250.......-----260.......270------.......280....-...290...-----...---.300..---.....310-.------.-------.....320........-------330.......340...--....350......----.360.......370...--....380-........390----.........400.---......410...-....420.......430--.........440.......450.......460.......470-........480.......490........500.......510-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------MAMNLRKNQA
P
L
Y
I
K
V
H
EIDN
T
A
I
I
---
V
NDGGLPKG
T
V
F
S
---
C
G
---
L
V
L
E------------EDVPQG
H
K
V
A
L
---------TDL--NQGD
E
I
-
V
R
Y
G
E
VIG-F
A
D
E
--
T
I
K
R
G
-
S
W
I
R
E
A
--
L
V
RM---PAPPALDDLP--------------LANRVPQPRPPLEGYTFEGYR-NADGSAGT
K
N
I
L
G
I
T
T
S
V
Q
C
V
V
G
V
L
D
Y
-----
A
V
K
--
R
-
I
K
E
E
LLPKYPNVDDV-VPLHHQYGC
G
V
A
INAPD
A
V
I
P
I
R
T
I
Q
N
L
A
KHPNFGG
E
V
--------------
M
V
-----
I
---------GL--------
G
C
E
K
L
L
P
E
R
IA--SEND--D
D
I
L
S
L
Q
------DHR
G
F
A
A
M
I
Q
S
I
--
L
--
E
M
A
E
E
R
L
I
RLNSR-----TRVSCPVS
D
L
V
I
G
------
L
QCGGSDAFSGVTA-NPA
V
G
Y
A
A
D
-----
L
L
V
---RAG
A
T
V
---
L
F
S
E
V
T
E
V
-
R
------
D
-------
A
I
H
LLT
P
-
R
A
V
S
E
E
V
G
-------
Q
S
L
I
K
E
M
K
W
Y
D
S
Y
L
RR--GDADRSANPSPGN----KKG
G
L
S
N
V
V
E
K
A
L
G
S
V
A
--KSGTSP--ISGVLGP
G
E
------
R
A
KQK
G
L
L
F
A
ATP---ASD
F
V
C
G
T
L
Q
LA-AGM
N
L
Q
V
F
TTGRGTP----YGLAAA
P
V
L
K
V
S
T
R
H
S
L
S
E
H
W
A
D
L
I
DINAGRIATGEA
S
I
E
D
--
V
G
W
E
I
F
R
T
I
L
D
V
ASGRKQ
T
W
-
A
D
RWGLHND
L
C
LFNPAPVT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31
Fugue
64.00
17%
-78
- C2 -
3RFU
3
?
A:
[74-736]
VSP
E
Y
L
D
M
R
R
R
F
W
I
A
L
M
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T
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P
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M
G
GHGLKHFISGNG
S
S
W
I
Q
L
L
L
A
T
P
V
V
LWGG
W
P
F
F
K
R
G
W
Q
S
L
K
TGQLN
M
F
T
L
I
A
M
G
I
G
V
A
W
I
Y
S
M
V
A
V
L
WPGVFP
H
A
F
R
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E
G
V
V
A
V
Y
F
E
A
A
A
V
I
T
T
L
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---
L
G
Q
V
L
E
L
K
A
R
E
Q
T
---
G
S
---
A
I
R
A
L
L
KLVPE
S
A
H
R
I
K
E
D
G
S
E
E
E
V
S
L
---------
D
N
V
--
A
V
G
D
L
L
R
V
R
P
G
E
K
I
--
P
V
D
G
--
E
V
Q
E
G
R
S
F
V
D
E
S
--
M
V
T
G
---
E
P
I
P
V
A
K
E
A
S
A
K
V
I
G
ATINQT
G
S
F
V
M
K
A
L
H
V
G
S
D
T
M
L
A
R
I
V
Q
M
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S
-
D
A
Q
R
S
R
A
P
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R
L
A
D
T
V
S
G
W
F
V
P
A
V
I
L
V
-----
A
V
L
--
S
F
I
V
W
A
L
L
G
P
Q
P
A
L
S
Y
G
-
L
I
A
A
V
S
V
L
I
I
A
C
P
C
A
L
G
L
A
T
P
M
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M
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G
V
G
K
G
A
Q
S
G
V
L
I
KN
A
E
A
L
E
R
M
E
K
VN
T
L
V
-----
V
D
K
T
GTLTEG
H
P
--------
K
L
T
R
I
V
T
D
D
F
V
--
E
D
N
A
--
L
A
L
A
A
A
L
------
E
H
Q
S
E
H
P
L
A
N
A
I
--
V
--
H
A
A
K
E
K
G
L
S
L
G
S
V
-----
E
A
F
E
A
P
T
G
K
G
V
V
G
Q
V
DGH
H
V
A
I
G
N
A
R
L
M
Q
E
H
G
G
D
N
A
P
L
F
E
K
A
D
-----
E
L
R
---
G
K
G
A
S
V
---
M
F
M
A
V
D
G
---------
K
-------
T
V
A
L
L
V
V
-
E
D
P
I
K
S
S
T
-------
P
E
T
I
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E
L
Q
Q
S
G
I
E
I
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M
L
T
G
D
S
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R
T
A
E
A
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A
G
T
L
GIK
K
V
V
A
E
I
M
P
E
D
K
S
R
I
V
S
E
--
L
K
D
K
G
L
--
I
V
A
M
A
G
D
G
V
ND
A
P
--
A
L
A
K
A
D
I
G
I
A
M
G
T
---
G
T
D
----
V
A
I
E
S
-
A
G
V
T
L
L
-----
H
G
D
L
----
R
G
I
A
K
A
R
R
L
S
E
S
T
M
S
N
I
R
Q
N
L
F
F
A
F
I
Y
N
V
L
G
V
P
L
A
A
----
G
--
V
L
Y
P
L
T
G
L
L
L
S
P
M
I
A
A
A
A
M
A
-
L
S
S
V
S
V
I
I
N
A
L
R
L
K
R
V
T
L
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
Fugue
62.86
15%
-79
- C5 -
4UZY
2
?
A:
[9-650]
-------------------------QQPA
R
P
I
A
EGQ
Y
T
Q
T
I
Y
T
L
I
K
E
QK
F
A
E
A
I
Q
H
L
Q
Y
Q
L
Q
N
V
P
ES
R
A
A
L
S
L
L
G
Y
C
Y
Y
Y
T
GQ
Y
D
M
A
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Q
M
Y
E
Q
L
V
T
L
Y
P
SN
E
D
Y
K
L
Y
Y
A
Q
S
L
Y
K
G
G
M
Y
P
E
A
S
K
A
V
V
---
K
V
E
G
H
Q
K
A
V
T
T
L
L
---
V
A
---
C
S
Y
E
------------
Q
D
D
L
T
G
C
R
R
Q
L
D
K
CAPED
P
D
T
M
V
--
N
T
G
C
I
M
-
F
K
E
G
K
F
E
A
-
A
R
Q
K
F
N
D
Y
Q
P
E
-
L
L
Y
N
I
A
--
L
C
Y
Y
K
TK
Q
F
G
P
A
L
K
H
L
A
E
-------------
I
I
E
K
A
V
R
E
H
P
E
L
S
V
G
S
D
G
M
E
V
-
R
S
V
G
N
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T
L
K
E
T
A
L
I
E
A
F
N
L
K
A
A
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Y
T
M
KN
V
E
A
A
K
--
E
-
A
L
T
D
M
P
P
R
A
E
E
E
L
D
P
-
V
T
L
H
N
S
A
L
I
N
---
M
D
S
D
P
T
G
G
F
K
K
L
N
F
L
L
Q
S
P
P
F
P
P
E
T
--------------
F
A
-----
N
---------
L
L
L
L
Y
C
KPSH
G
F
Y
D
L
A
A
D
V
L
A
E
N
P
Q
Y
A
--
G
K
L
L
S
P
D
------
L
Y
D
Y
L
Q
A
A
I
G
R
Y
KS
P
--
E
E
A
F
R
R
F
D
E
L
A
T
R
H
V
E
Q
L
R
R
L
T
K
Q
I
Q
D
A
R
I
A
------
R
D
N
D
A
I
K
R
A
I
N
E
Y
D
-
E
A
L
E
A
Y
I
P
G
-----
L
M
A
---
M
A
S
I
Y
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D
M
E
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Y
S
N
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E
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I
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R
------
Q
-------
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A
E
F
C
S
E
H
E
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K
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N
V
A
-------
H
T
F
F
M
Q
D
N
H
Y
K
E
A
I
R
Y
--
Y
E
P
V
V
K
K
N
A
D
--
N
----
L
L
G
V
T
A
I
V
L
A
N
L
C
V
S
Y
I
--
M
T
S
Q
N
E
--
E
A
E
E
L
M
R
K
V
------
E
K
E
E
E
R
S
S
M
Q
D
P
D
---
K
P
C
F
H
L
C
I
I
N
L
V
-
I
G
-
T
L
Y
C
A
K
G
N
Y
E
F
G
----
V
S
R
I
I
K
S
L
E
E
T
D
T
W
Y
Y
A
K
R
C
F
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A
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I
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A
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M
I
V
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S
S
F
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--
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A
F
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A
E
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G
K
D
I
R
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F
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N
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I
A
S
E
A
R
M
L
K
K
M
F
L
K
L
R-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30
Fugue
58.91
15%
-31
- C3 -
3EPO
1
THIC_CAUCR
A:
[5-546]
---------------------------------------------------------------------------------------------------------
S
T
I
K
A
V
A
E
T
I
S
T
G
P
I
P
G
S
R
K
V
---
Y
Q
A
G
E
L
F
P
E
L
R
V
P
---
F
R
---
E
V
A
V
------------
H
P
S
A
N
E
P
P
V
T
I
---------
Y
D
P
SG
P
Y
S
D
P
A
-
I
Q
I
D
I
E
K
G
-
L
P
R
-----
T
R
E
-
A
L
V
V
A
R
GD
V
E
E
V
---
A
D
P
R
Q
V
P
E
F
P
--------------
D
T
G
R
K
I
Y
R
A
K
P
G
K
L
V
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Q
L
E
Y
A
-
R
A
G
I
---------
I
T
A
E
M
E
Y
V
A
I
R
E
N
L
-----
R
R
E
--
Q
-
D
R
P
C
V
R
D
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E
D
F
G
A
S
I
-
P
D
F
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N
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G
E
L
E
P
M
A
I
G
R
N
F
--------------
L
V
K
I
N
A
N
I
---------
G
N
--------
T
V
A
D
E
V
D
K
L
V
W
--
A
T
R
W
GA
D
T
V
M
D
L
S
------
T
G
R
N
----------
I
--
H
N
I
R
D
W
I
I
R
-
N
S
S
-----
V
P
I
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P
I
Y
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A
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E
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K
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E
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E
V
F
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E
Q
GVDY
F
T
I
---
H
A
G
V
R
L
---
P
F
I
P
M
T
A
K
-
R
VTGIVS
R
-------
G
G
S
I
M
A
K
-
W
C
L
A
H
H
K
E
N
F
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A
Y
D
V
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S
L
--
G
D
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L
R
P
G
S
T
A
D
A
N
------
D
E
A
Q
F
S
E
L
R
T
L
G
E
L
T
--
K
V
A
W
K
H
G
V
Q
V
M
I
E
G
P
G
H
VAMHK
I
K
A
N
M
D
E
Q
L
K
H
C
H
E
---
A
P
F
Y
T
L
G
P
L
T
T
D
-
I
A
P
G
Y
D
H
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A
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M
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K
E
H
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G
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P
D
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D
D
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T
G
V
I
T
Y
K
L
A
A
H
A
A
D
L
A
K
GH
P
G
A
A
M
W
D
D
A
I
S
R
A
R
F
E
F
R
-
W
-
E
D
Q
F
N
L
G
L
D
P
E
T
A
R
K
F
H
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
HHSearch
55.12
59%
-103
- C6 -
3LAZ
-
GARD_ECOLI
A:
[10-94]
------------------------------------------------------------------------------------------------------------
T
P
T
A
F
Y
I
K
V
H
D
T
D
N
V
A
I
I
---
V
N
D
N
G
L
K
A
G
T
R
F
P
---
D
G
---
L
E
L
I
------------
E
H
I
P
Q
G
H
K
V
A
L
---------
L
D
I
--
P
A
N
G
E
I
-
I
R
Y
G
E
V
I
G
-
Y
A
V
R
--
A
I
P
R
G
-
S
W
I
D
E
S
--
M
V
V
L
---
P
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
53.99
61%
-106
- C6 -
3LAZ
-
GARD_ECOLI
A:
[14-94]
----------------------------------------------------------------------------------------------------------------
F
Y
I
K
V
H
D
T
D
N
V
A
I
I
---
V
N
D
N
G
L
K
A
G
T
R
F
P
---
D
G
---
L
E
L
I
------------
E
H
I
P
Q
G
H
K
V
A
L
---------
L
D
I
--
P
A
N
G
E
I
-
I
R
Y
G
E
V
I
G
-
Y
A
V
R
--
A
I
P
R
G
-
S
W
I
D
E
S
--
M
V
V
L
---
P
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
HHSearch
47.79
36%
-85
- C6 -
3K3S
1
?
A:
[21-104]
--------------------------------------------------------------------------------------------------------------
G
M
Q
Y
I
K
I
H
A
L
D
N
V
A
V
A
---
L
A
--
D
L
A
E
G
T
E
V
S
V
DN
Q
T
---
V
T
L
R
------------
Q
D
V
A
R
G
H
K
F
A
L
---------
T
D
I
--
A
K
G
A
N
V
-
I
K
Y
G
L
P
I
G
-
Y
A
L
A
--
D
I
A
A
G
-
E
H
V
H
A
H
--
N
T
R
T
---
N
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
47.45
39%
-104
- C6 -
3K3S
1
?
A:
[21-96]
--------------------------------------------------------------------------------------------------------------
G
M
Q
Y
I
K
I
H
A
L
D
N
V
A
V
A
---
L
A
D
--
L
A
E
G
T
E
V
S
---
V
D
N
Q
T
V
T
L
R
------------
Q
D
V
A
R
G
H
K
F
A
L
---------
T
D
I
--
A
K
G
A
N
V
-
I
K
Y
G
L
P
I
G
-
Y
A
L
A
--
D
I
A
A
G
-
E
H
V
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
Fugue
45.45
20%
-64
- C5 -
4Q05
2
?
A:
[34-360]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
N
S
W
Q
I
G
P
R
T
L
P
A
P
S
G
A
S
D
-----
V
L
Y
--
N
-
I
I
S
K
T
P
T
P
V
P
T
I
N
L
N
-
L
V
P
R
T
E
S
E
W
R
A
A
I
T
Q
L
D
E
G
-
K
V
D
M
A
R
E
I
S
K
Q
L
S
V
S
V
E
H
--------------
G
V
-----
I
E--------
G
V
--------
S
V
Y
Y
V
T
P
V
E
V
A
--
P
D
L
E
--
D
K
L
F
V
H
T
H
G
G
AFV
L
N
G
G
E
A
G
T
I
E
A
I
--
V
I
A
T
L
A
K
V
R
V
L
S
I
D
Y
R
-----
M
P
P
S
H
P
A
P
-------------
A
A
R
D
D
V
F
T
V
Y
Q
H
-
L
L
K
Q
G
S
A
Q
K
-----
I
A
L
G
G
S
S
G
G
A
N
L
---
T
M
G
L
V
Q
H
L
-
I
------
E
Q
EVDLPG
A
L
F
L
G
T
P
-
G
A
D
M
S
K
T
G
-----------------
D
S
Y
Y
I
N
--
D
G
I
D
R
N
L
V
T
Y
D
G
------------
F
L
E
A
A
V
R
L
Y
A
N
G
R
D
L
K
D
P
--
L
V
S
P
L
Y
G
D
L
------
H
G
F
P
P
T
F
L
I
T
G
T
R
DLL
L
S
A
T
V
R
T
H
I
K
L
R
Q
S
G
V
V
A
D
L
F
V
Y
-
E
G
I
A
----
H
G
D
Y
A
V
D
L
T
A
P
E
T
Q
H
A
F
A
E
L
N
A
F
L
L
Q
H
L
R
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_CBE
45.24
40%
-101
- C6 -
3K3S
1
?
C:
[24-96]
-----------------------------------------------------------------------------------------------------------------
Y
I
K
I
H
A
L
D
N
V
A
V
A
---
L
A
D
--
L
A
E
G
T
E
V
S
---
V
D
NQT
V
T
L
R
------------
Q
D
V
A
R
G
H
K
F
A
L
---------
T
D
I
--
A
K
G
A
N
V
-
I
K
Y
G
L
P
I
G
-
Y
A
L
A
--
D
I
A
A
G
-
E
H
V
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_CBE
44.60
40%
-97
- C6 -
3K3S
2
?
H:
[24-96]
-----------------------------------------------------------------------------------------------------------------
Y
I
K
I
H
A
L
D
N
V
A
V
A
---
L
A
D
--
L
A
E
G
T
E
V
S
---
V
D
NQT
V
T
L
R
------------
Q
D
V
A
R
G
H
K
F
A
L
---------
T
D
I
--
A
K
G
A
N
V
-
I
K
Y
G
L
P
I
G
-
Y
A
L
A
--
D
I
A
A
G
-
E
H
V
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_CBE
43.99
40%
-99
- C6 -
3K3S
2
?
G:
[24-96]
-----------------------------------------------------------------------------------------------------------------
Y
I
K
I
H
A
L
D
N
V
A
V
A
---
L
A
D
--
L
A
E
G
T
E
V
S
---
V
D
NQT
V
T
L
R
------------
Q
D
V
A
R
G
H
K
F
A
L
---------
T
D
I
--
A
K
G
A
N
V
-
I
K
Y
G
L
P
I
G
-
Y
A
L
A
--
D
I
A
A
G
-
E
H
V
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_CBE
43.80
40%
-99
- C6 -
3K3S
2
?
B:
[24-96]
-----------------------------------------------------------------------------------------------------------------
Y
I
K
I
H
A
L
D
N
V
A
V
A
---
L
A
D
--
L
A
E
G
T
E
V
S
---
V
D
NQT
V
T
L
R
------------
Q
D
V
A
R
G
H
K
F
A
L
---------
T
D
I
--
A
K
G
A
N
V
-
I
K
Y
G
L
P
I
G
-
Y
A
L
A
--
D
I
A
A
G
-
E
H
V
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_CBE
43.72
40%
-100
- C6 -
3K3S
1
?
E:
[24-96]
-----------------------------------------------------------------------------------------------------------------
Y
I
K
I
H
A
L
D
N
V
A
V
A
---
L
A
D
--
L
A
E
G
T
E
V
S
---
V
D
NQT
V
T
L
R
------------
Q
D
V
A
R
G
H
K
F
A
L
---------
T
D
I
--
A
K
G
A
N
V
-
I
K
Y
G
L
P
I
G
-
Y
A
L
A
--
D
I
A
A
G
-
E
H
V
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_CBE
43.34
40%
-103
- C6 -
3K3S
1
?
D:
[24-96]
-----------------------------------------------------------------------------------------------------------------
Y
I
K
I
H
A
L
D
N
V
A
V
A
---
L
A
D
--
L
A
E
G
T
E
V
S
---
V
D
NQT
V
T
L
R
------------
Q
D
V
A
R
G
H
K
F
A
L
---------
T
D
I
--
A
K
G
A
N
V
-
I
K
Y
G
L
P
I
G
-
Y
A
L
A
--
D
I
A
A
G
-
E
H
V
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_CBE
43.00
40%
-90
- C6 -
3K3S
1
?
F:
[24-96]
-----------------------------------------------------------------------------------------------------------------
Y
I
K
I
H
A
L
D
N
V
A
V
A
---
L
A
D
--
L
A
E
G
T
E
V
S
---
V
D
NQT
V
T
L
R
------------
Q
D
V
A
R
G
H
K
F
A
L
---------
T
D
I
--
A
K
G
A
N
V
-
I
K
Y
G
L
P
I
G
-
Y
A
L
A
--
D
I
A
A
G
-
E
H
V
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
40.86
14%
-245
- C6 -
3TEE
1
FLGA_SALTY
A:
[70-93]
--------------------------------------------------------------------------------------------------------------------
V
Q
A
T
G
N
Y
V
A
V
---
A
A
--
P
I
A
R
G
G
K
L
T
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
Fugue
39.20
11%
-48
- C4 -
5GAN
-
PRP6_YEAST
J:
[155-898]
-----------------------------------------------------------------GNVDLNKLTEEREKLLQSQIDENLAQLTKNASNPIQ
V
N
K
P
N
A
A
T
D
A
L
S
Y
L
K
D
L
E
N
D
R
V
N
S
L
SDA
T
L
E
D
L
Q
K
M
R
T
I
L
K
---
S
Y
---
R
K
A
D
------------
P
T
N
P
Q
G
W
I
A
S
A
---------
R
L
E
--
E
K
A
R
K
F
-
S
V
A
K
K
I
I
E
-
N
G
C
Q
--
E
C
P
R
S
-
S
D
I
W
L
E
--
N
I
R
L
---
H
E
S
D
V
H
Y
C
K
T
--------------
L
V
A
T
A
I
N
F
N
P
T
S
P
L
L
W
F
K
A
I
D
L
E
S
T
T
V
N
K
Y
R
V
V
R
K
A
L
Q
E
I
P
R
D
E
G
L
W
K
L
-----
A
V
S
FE
A
-
D
K
A
Q
V
I
K
M
L
E
K
A
T
Q
F
-
I
P
Q
S
M
D
L
-
L
T
A
Y
T
N
L
Q
S
Y
H
N
A
K
M
T
L
N
S
F
R
K
I
L
P
Q
E
P
E
I
--------------
W
I
-----
I
---------
S
T
--------
L
L
E
E
R
N
N
P
K
L
V
--
S
L
L
K
--
E
G
L
L
E
L
S
------
K
-
N
G
Y
K
A
T
L
S
A
W
--
L
--
K
R
A
E
A
L
N
D
A
P
N
S
N
-----
L
T
C
Q
A
I
V
Y
A
I
L
E
W
------
L
R
E
S
G
E
Y
E
S
E
L
N
N
V
-
D
Q
I
L
E
K
M
P
H
-----
S
-----
K
V
Q
I
A
V
---
L
K
K
L
I
Q
W
D
-
P
------
C
-------
D
T
V
L
W
S
R
-
L
K
M
A
T
E
S
Y
-------
E
E
L
L
A
F
F
Q
E
L
L
F
Q
T
S
D
--
D
I
R
A
N
M
R
E
K
S
P
G
L
----
L
M
M
Y
V
S
E
Y
W
K
A
Q
K
G
D
T
---
R
Q
T
L
V
L
--
I
D
Q
I
I
D
F
A
P
------
H
N
L
D
L
R
F
F
K
I
K
L
L
---
G
R
S
L
Q
L
D
E
L
R
D
F
-
F
Q
Q
T
F
S
S
L
E
D
F
K
I
S
G
----
T
E
R
L
Y
Y
K
Y
V
N
F
L
R
Y
Q
D
L
N
E
E
A
I
K
F
L
N
E
R
C
L
K
S
F
P
I
C
H
K
F
F
L
--
Q
L
G
Q
I
Y
H
S
M
G
N
I
E
M
S
R
E
T
Y
L
S
G
T
R
L
V
P
N
C
P
L
L
W
V
S
L
S
K
I
D
EIDLKNPVRARSILDRGLLKNPDDVLFYIAKIQMEIRLGNLDQAELLVTQALQKFPSNALLWVEQIKLFKHGNKSSLKKTIFQDALRRTQNDHRVLLEIGVSFYAEAQYETSLKWLERALKKCSRYGDTWVWLFRTYARLGKDTVDLYNMFDQCEPTYGPEWIAASKNCTPREILLRLMND
17
HHSearch
28.52
16%
-127
- C6 -
1WVO
-
A:
[6-70]
------------------------------------------------------------------------------------------------------------------------
S
G
S
V
V
A
---
K
V
--
K
I
P
E
G
T
I
L
T
M--
D
M
---
L
T
-
V
------------
K
V
G
E
P
K
G
-
Y
----------------
P
P
E
-----
D
I
F
N
L
V
G
K
K
V
L
V
--
T
V
E
E
D
-
D
T
I
M
E
E
--
L
V
D
N
---
H
G
K
K
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
27.33
27%
-60
- C5 -
1WDN
1
GLNH_ECOLI
A:
[97-170]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
N
N
D
V
K
S
V
K
D
L
D
G
K
V
V
A
V
K
S
G
T
G
S
V
D
Y
-----
A
K
A
--
N
-
I
K
T
K
D
L
R
Q
F
P
N
I
D
N
A
Y
M
E
L
G
T
N
R
A
D
A
V
L
H
D
T
P
N
I
L
Y
F
I
K
T
A
G
N
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
26.66
27%
-50
- C5 -
1GGG
-
GLNH_ECOLI
A:
[97-170]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
N
N
D
V
K
S
V
K
D
L
D
G
K
V
V
A
V
K
S
G
T
G
S
V
D
Y
-----
A
K
A
--
N
-
I
K
T
K
D
L
R
Q
F
P
N
I
D
N
A
Y
M
E
L
G
T
N
R
A
D
A
V
L
H
D
T
P
N
I
L
Y
F
I
K
T
A
G
N
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------