@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : bsu03040: (2016-06-05 )
MFAKRFKTSLLPLFAGFLLLFHLVLAGPAAASAETANKSNELTAPSIKSGTILHAWNWSFNTLKHNMKDIHDAGYTAIQTSPINQVKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVINHTTSDYAAISNEVKSIPNWTHGNTQIKNWSDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLDRALNDGADGFRFDAAKHIELPDDGSYGSQFWPNITNTSAEFQYGEILQDSASRDAAYANYMDVTASNYGHSIRSALKNRNLGVSNISHYASDVSADKLVTWVESHDTYANDDEESTWMSDDDIRLGWAVIASRSGSTPLFFSRPEGGGNGVRFPGKSQIGDRGSALFEDQAITAVNRFHNVMAGQPEELSNPNGNNQIFMNQRGSHGVVLANAGSSSVSINTATKLPDGRYDNKAGAGSFQVNDGKLTGTINARSVAVLYPDDIAKAPHVFLENYKTGVTHSFNDQLTITLRADANTTKAVYQINNGPETAFKDGDQFTIGKGDPFGKTYTIMLKGTNSDGVTRTEKYSFVKRDPASAKTIGYQNPNHWSQVNAYIYKHDGSRVIELTGSWPGKPMTKNADGIYTLTLPADTDTTNAKVIFNNGSAQVPGQNQPGFDYVLNGLYNDSGLSGSLPH

Atome Classification :

(20 SA) .........10........20........30........40........50-.--........60...-...-..-70........80....--....90........100.......110.......120.......130.......140...-----------....----------150------------....----.-----.-------------..-----160---.-------..-------..-----..--170........180.......190.......200.......210.......220.....--------..230......------.240-----------.------------........250......--..--.260.......270.......280----..-.-....290..---.---.---...300.......310.......-.----320-.........330-......-.-340....---------.-----------------------..350--..------------------.------....--360..--------.----.-----.---..370----.----......380....---..-.390...-.-.-..400.......410........420.......430.......440--------.---------.-----------...-...450-.....---.---.460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MFAKRFKTSLLPLFAGFLLLFHLVLAGPAAASAETANKSNELTAPSIKSG--T--ILHAWNWSFNTLK-HNM-KD-IHDAGYTAIQTSPINQ--VKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVINHTT-----------SDYA----------AI-------------SNEV----K-----S-------------IP-----NWT---H-------GN-------TQ-----IK--NW-SDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLDRALNDGADGFRFDAAKHIELPDD--------GSYGSQFWPNI------TN-------------T------------SAEFQYGEI--LQDSAS--RD--AAYANYMDVTASNYGHSIRSALKN----RN-L-GVSNISHYA---S---D---VSADKLVTWVESHDT-YANDDEE-S----T---WMSDDDIRLGWA-VIASRS-G-STPLFFS---------R-----------------------PEGGG--NG------------------V------RFPG--KSQIG--------D----R-----G---SALFE----D----QAITAVNRFHNVM---AG-QPEELSN-P-N-GNNQIFMNQRGSHG-VVLANAGSSSVSINTATKLPDGRYDNKAGA---------G---------S-----------FQV-NDGKLT-GTINA---R---SVAVLYPDDIAKAPHVFLENYKTGVTHSFNDQLTITLRADANTTKAVYQINNGPETAFKDGDQFTIGKGDPFGKTYTIMLKGTNSDGVTRTEKYSFVKRDPASAKTIGYQNPNHWSQVNAYIYKHDGSRVIELTGSWPGKPMTKNADGIYTLTLPADTDTTNAKVIFNNGSAQVPGQNQPGFDYVLNGLYNDSGLSGSLPH
1 PsiBlast_PDB 86.1499% -51 - C2 -1BAG AMY_BACSU A:[1-425] -----------------------------------------LTAPSIKSG--T--ILHAWNWSFNTLK-HNM-KD-IHDAGYTAIQTSPINQ--VKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVINHTT-----------FDYA----------AI-------------SNEV----K-----S-------------IP-----NWT---H-------GN-------TQ-----IK--NW-SDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLERALNDGADGFRFDAAKHIELPDD--------GSYGSQFWPNI------TN-------------T------------SAEFQYGQI--LQDSAS--RD--AAYANYMDVTASNYGHSIRSALKN----RN-L-GVSNISHYA---S---D---VSADKLVTWVESHDT-YANDDEE-S----T---WMSDDDIRLGWA-VIASRS-G-STPLFFS---------R-----------------------PEGGG--NG------------------V------RFPG--KSQIG--------D----R-----G---SALFE----D----QAITAVNRFHNVM---AG-QPEELSN-P-N-GNNQIFMNQRGSHG-VVLANAGSSSVSINTATKLPDGRYDNKAGA---------G---------S-----------FQV-NDGKLT-GTINA---R---SVAVLYPD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 85.6399% -46 - C2 -1UA7 AMY_BACSU A:[1-422] --------------------------------------------PSIKSG--T--ILHAWNWSFNTLK-HNM-KD-IHDAGYTAIQTSPINQ--VKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVINHTT-----------FDYA----------AI-------------SNEV----K-----S-------------IP-----NWT---H-------GN-------TQ-----IK--NW-SDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLERALNDGADGFRFDAAKHIELPDD--------GSYGSQFWPNI------TN-------------T------------SAEFQYGEI--LQDSAS--RD--AAYANYMDVTASNYGHSIRSALKN----RN-L-GVSNISHYA---S---D---VSADKLVTWVESHDT-YANDDEE-S----T---WMSDDDIRLGWA-VIASRS-G-STPLFFS---------R-----------------------PEGGG--NG------------------V------RFPG--KSQIG--------D----R-----G---SALFE----D----QAITAVNRFHNVM---AG-QPEELSN-P-Q-GNNQIFMNQRGSHG-VVLANAGSSSVSINTATKLPDGRYDNKAGA---------G---------S-----------FQV-NDGKLT-GTINA---R---SVAVLYPD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 84.7294% -50 - C2 -3DC0 ? A:[1-422] --------------------------------------------PSIKSG--T--ILHAWNWSFNTLK-NNM-KD-IHDAGYTAIQTSPINQ--VKEGNKGDKSMGNWYWLYQPTSYQIGNRYLGSEEEFKEMCAAAEEYGVKVIVDAVINHTT-----------SDYA----------AI-------------SNEI----K-----S-------------IS-----NWT---H-------GN-------TQ-----IK--NW-SDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLERALNDGADGFRYDAAKHIELPDD--------GNYGSQFWPNI------TN-------------T------------SAEFQYGEI--LQDSAS--RD--AAYANYMNVTASNYGHSIRSALKN----RN-L-SVSNISHYA---S---D---VSADKLVTWVESHDT-YANDDEE-S----T---WMSDDDIRLGWA-VIASRS-G-STPLFFS---------R-----------------------PDGGG--NG------------------V------RFPG--KTQIG--------D----R-----G---SALFE----D----QAIVAVNTFHNVM---AG-QPEELSN-P-N-GNNQIFMNQRGSKG-VVLANAGSSSVSINASTKLPDGSYDNKAGT---------G---------S-----------FQV-RDGKLT-GTINA---R---SVAVLYPD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
53 HHSearch 82.6096% -50 - C2 -1UA7 AMY_BACSU A:[3-421] ----------------------------------------------IKSG--T--ILHAWNWSFNTLK-HNM-KD-IHDAGYTAIQTSPINQ--VKEGNQGDKSMSNWYWLYQPTSYQIGNRYLGTEQEFKEMCAAAEEYGIKVIVDAVINHTT-----------FDYA----------AI-------------SNEV----K-----S-------------IP-----NWT---H-------GN-------TQ-----IK--NW-SDRWDVTQNSLLGLYDWNTQNTQVQSYLKRFLERALNDGADGFRFDAAKHIELPDD--------GSYGSQFWPNI------TN-------------T------------SAEFQYGEI--LQDSAS--RD--AAYANYMDVTASNYGHSIRSALKN----RN-L-GVSNISHYA---S---D---VSADKLVTWVESHDT-YANDDEE-S----T---WMSDDDIRLGWA-VIASRS-GSTPLFFSR---------------------------------PEGGG--NG------------------V------RFPG--KSQIG--------D----R-----G---SALFE----D----QAITAVNRFHNVM---AG-QPEELSN-P-QGNNQIFMNQ-RGSHG-VVLANAGSSSVSINTATKLPDGRYDNKAGA---------G---------S-----------FQV-NDGKLT-GTINA---R---SVAVLYP--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17 PsiBlast_PDB 50.9523% -55 - C2 -1DHK AMYP_PIG A:[3-449] -------------------------------------------APQTQSGRTS--IVHLFEWRWVDIA-LEC-ERYLGPKGFGGVQVSPPNE--NVVVTNPSRP---WWERYQPVSYKLCTRS-GNENEFRDMVTRCNNVGVRIYVDAVINHMC-----------GSGA----------AAGTGTTCGSYCNPGSREF----P-----A-------------VPYSAW-DFN---D-------GK-------CKTASGGIE--SY-NDPYQVRDCQLVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRIDASKHMWPGDI--------KAVLDKLHNLN------TNWFPA---------G------------SRPFIFQEVIDLGGEAI--QS--SEYFGNGRVTEFKYGAKLGTVVRKWSGEKM-S-YLKNWGEGW---G---F---MPSDRALVFVDNHDNQRGHGAGG-A----S---ILTFWDARL-YK-VAVGFM-L-AHPYGFT---------RVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKE------------------V------TINA--DTTCG--------N----D-----W---VCEHR----W----REIRNMVWFRNVV---DG-QPFANWW-D-N-GSNQVAFG-RGNRG-FIVFNNDDWQLSSTLQTGLPGGTY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11 PsiBlast_PDB 50.6423% -49 - C2 -1KXQ AMYP_PIG A:[3-449] -------------------------------------------APQTQSGRTS--IVHLFEWRWVDIA-LEC-ERYLGPKGFGGVQVSPPNE--NIVVTNPSRP---WWERYQPVSYKLCTRS-GNENEFRDMVTRCNNVGVRIYVDAVINHMC-----------GSGA----------AAGTGTTCGSYCNPGSREF----P-----A-------------VPYSAW-DFN---D-------GK-------CKTASGGIE--SY-NDPYQVRDCQLVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRIDASKHMWPGDI--------KAVLDKLHNLN------TNWFPA---------G------------SRPFIFQEVIDLGGEAI--KS--SEYFGNGRVTEFKYGAKLGTVVRKWSGEKM-S-YLKNWGEGW---G---F---MPSDRALVFVDNHDNQRGHGAGG-S----S---ILTFWDARL-YK-IAVGFM-L-AHPYGFT---------RVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKE------------------V------TINA--DTTCG--------N----D-----W---VCEHR----W----REIRNMVWFRNVV---DG-QPFANWW-D-N-GSNQVAFG-RGNRG-FIVFNNDDWQLSSTLQTGLPGGTY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16 PsiBlast_PDB 50.6323% -51 - C2 -1PPI AMYP_PIG A:[3-449] -------------------------------------------APQTQSGRTS--IVHLFEWRWVDIA-LEC-ERYLGPKGFGGVQVSPPNE--NVVVTNPSRP---WWERYQPVSYKLCTRS-GNENEFRDMVTRCNNVGVRIYVDAVINHMC-----------GSGA----------AAGTGTTCGSYCNPGSREF----P-----A-------------VPYSAW-DFN---D-------GK-------CKTASGGIE--SY-NDPYQVRDCQLVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRIDASKHMWPGDI--------KAVLDKLHNLN------TNWFPA---------G------------SRPFIFQEVIDLGGEAI--KS--SEYFGNGRVTEFKYGAKLGTVVRKWSGEKM-S-YLKNWGEGW---G---F---MPSDRALVFVDNHDNQRGHGAGG-S----S---ILTFWDARL-YK-VAVGFM-L-AHPYGFT---------RVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKE------------------V------TINA--DTTCG--------N----D-----W---VCEHR----W----REIRNMVWFRNVV---DG-EPFANWW-D-N-GSNQVAFG-RGNRG-FIVFNNDDWQLSSTLQTGLPGGTY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13 PsiBlast_PDB 50.5423% -51 - C2 -1KXV - AMYP_PIG A:[3-449] -------------------------------------------APQTQSGRTS--IVHLFEWRWVDIA-LEC-ERYLGPKGFGGVQVSPPNE--NIVVTNPSRP---WWERYQPVSYKLCTRS-GNENEFRDMVTRCNNVGVRIYVDAVINHMC-----------GSGA----------AAGTGTTCGSYCNPGSREF----P-----A-------------VPYSAW-DFN---D-------GK-------CKTASGGIE--SY-NDPYQVRDCQLVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRIDASKHMWPGDI--------KAVLDKLHNLN------TNWFPA---------G------------SRPFIFQEVIDLGGEAI--KS--SEYFGNGRVTEFKYGAKLGTVVRKWSGEKM-S-YLKNWGEGW---G---F---MPSDRALVFVDNHDNQRGHGAGG-S----S---ILTFWDARL-YK-IAVGFM-L-AHPYGFT---------RVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKE------------------V------TINA--DTTCG--------N----D-----W---VCEHR----W----REIRNMVWFRNVV---DG-QPFANWW-D-N-GSNQVAFG-RGNRG-FIVFNNDDWQLSSTLQTGLPGGTY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 49.6423% -47 - C2 -1KXT AMYP_PIG A:[3-449] -------------------------------------------APQTQSGRTS--IVHLFEWRWVDIA-LEC-ERYLGPKGFGGVQVSPPNE--NIVVTNPSRP---WWERYQPVSYKLCTRS-GNENEFRDMVTRCNNVGVRIYVDAVINHMC-----------GSGA----------AAGTGTTCGSYCNPGSREF----P-----A-------------VPYSAW-DFN---D-------GK-------CKTASGGIE--SY-NDPYQVRDCQLVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRIDASKHMWPGDI--------KAVLDKLHNLN------TNWFPA---------G------------SRPFIFQEVIDLGGEAI--KS--SEYFGNGRVTEFKYGAKLGTVVRKWSGEKM-S-YLKNWGEGW---G---F---MPSDRALVFVDNHDNQRGHGAGG-S----S---ILTFWDARL-YK-IAVGFM-L-AHPYGFT---------RVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKE------------------V------TINA--DTTCG--------N----D-----W---VCEHR----W----REIRNMVWFRNVV---DG-QPFANWW-D-N-GSNQVAFG-RGNRG-FIVFNNDDWQLSSTLQTGLPGGTY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 PsiBlast_PDB 49.3723% -51 - C2 -1BVN AMYP_PIG P:[3-451] -------------------------------------------APQTQSG--RTDIVHLFEWRWVDIA-LEC-ERYLGPKGFGGVQVSPPNE--NVVVTNPSRP---WWERYQPVSYKLCTRS-GNENEFRDMVTRCNNVGVRIYVDAVINHMC-----------GSGA----------AAGTGTTCGSYCNPGSREF----P-----A-------------VPYSAW-DFN---D-------GK-------CKTASGGIE--SY-NDPYQVRDCQLVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRLDASKHMWPGDI--------KAVLDKLHNLN------TNWFPA---------G------------SRPFIFQEVIDLGGEAI--SS--SEYFGNGRVTEFKYGAKLGTVVRKWSGEKM-S-YLKNWGEGW---G---F---MPSDRALVFVDNHDNQRGHGAGG-S----S---ILTFWDARL-YK-VAVGFM-L-AHPYGFT---------RVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKE------------------V------TINA--DTTCG--------N----D-----W---VCEHR----W----REIRNMVWFRNVV---DG-QPFANWW-D-N-GSNQVAFG-RGNRG-FIVFNNDDWQLSSTLQTGLPGGTYCN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 PsiBlast_PDB 48.6423% -50 - C2 -1PIG AMYP_PIG A:[3-451] -------------------------------------------APQTQSGRTS--IVHLFEWRWVDIA-LEC-ERYLGPKGFGGVQVSPPNE--NVVVTNPSRP---WWERYQPVSYKLCTRS-GNENEFRDMVTRCNNVGVRIYVDAVINHMC-----------GSGA----------AAGTGTTCGSYCNPGSREF----P-----A-------------VPYSAW-DFN---D-------GK-------CKTASGGIE--SY-NDPYQVRDCQLVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRIDASKHMWPGDI--------KAVLDKLHNLN------TNWFPA---------G------------SRPFIFQEVIDLGGEAI--SS--SEYFGNGRVTEFKYGAKLGTVVRKWSGEKM-S-YLKNWGEGW---G---F---MPSDRALVFVDNHDNQRGHGAGG-S----S---ILTFWDARL-YK-VAVGFM-L-AHPYGFT---------RVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKE------------------V------TINA--DTTCG--------N----D-----W---VCEHR----W----REIRNMVWFRNVV---DG-QPFANWW-D-N-GSNQVAFG-RGNRG-FIVFNNDDWQLSSTLQTGLPGGTYCN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10 PsiBlast_PDB 48.2923% -48 - C2 -4X0N AMYP_PIG A:[3-451] -------------------------------------------APQTQSGRTS--IVHLFEWRWVDIA-LEC-ERYLGPKGFGGVQVSPPNE--NVVVTNPSRP---WWERYQPVSYKLCTRS-GNENEFRDMVTRCNNVGVRIYVDAVINHMC-----------GSGA----------AAGTGTTCGSYCNPGSREF----P-----A-------------VPYSAW-DFN---D-------GK-------CKTASGGIE--SY-NDPYQVRDCQLVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRIDASKHMWPGDI--------KAVLDKLHNLN------TNWFPA---------G------------SRPFIFQEVIDLGGEAI--SS--SEYFGNGRVTEFKYGAKLGTVVRKWSGEKM-S-YLKNWGEGW---G---F---MPSDRALVFVDNHDNQRGHGAGG-S----S---ILTFWDARL-YK-VAVGFM-L-AHPYGFT---------RVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKE------------------V------TINA--DTTCG--------N----D-----W---VCEHR----W----REIRNMVWFRNVV---DG-QPFANWW-D-N-GSNQVAFG-RGNRG-FIVFNNDDWQLSSTLQTGLPGGTYCN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
61 HHSearch 47.8422% -66 - C2 -1JAE AMY_TENMO A:[4-469] ------------------------------------------ANFASGRN--S--IVHLFEWKWNDIA-DECERF-LQPQGFGGVQISPPNE--YLVA-----DGRPWWERYQPVSYI-INTRSGDESAFTDMTRRCNDAGVRIYVDAVINHMT-----------GMNG----------VG-------------TSGS----S-----ADHDGMNYPAVPYGSG-----DFH---S--------P-------CE-----VN--NY-QDADNVRNCELVGLRDLNQGSDYVRGVLIDYMNHMIDLGVAGFRVDAAKHMSPG----------------DLSVI------FSGLKNLNTDYGFADG------------ARPFIYQEV--IDLGGE--AISKNEYTGFGCVLEFQFGVSLGNAFQG----GN---QLKNLANWG---PEWGL---LEGLDAVVFVDNHDN-QRTGGSQIL----T---YKNPKPYKMAIA-FMLAHPYG-TTRIMSS---------F------------------------DFTD--ND------------------Q------GPPQDGSGNLI--------SPGIND-----DNTCSNGYVCEHRW----RQVYGMVGFRNAV---EGTQVENWWSND-D-NQIAFSRG--SQGF-VAFTNGGDLNQNLN--TGLPAGTYCDVISGELSGGSCTGK---------S-----------VTVGDNGSAD-ISLGS---AEDDGVLAIHVNA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 47.2123% -47 - C2 -1PIF AMYP_PIG A:[3-451] -------------------------------------------APQTQSGRTS--IVHLFEWRWVDIA-LEC-ERYLGPKGFGGVQVSPPNE--NVVVTNPSRP---WWERYQPVSYKLCTRS-GNENEFRDMVTRCNNVGVRIYVDAVINHMC-----------GSGA----------AAGTGTTCGSYCNPGSREF----P-----A-------------VPYSAW-DFN---D-------GK-------CKTASGGIE--SY-NDPYQVRDCQLVGLLDLALEKDYVRSMIADYLNKLIDIGVAGFRIDASKHMWPGDI--------KAVLDKLHNLN------TNWFPA---------G------------SRPFIFQEVIDLGGEAI--SS--SEYFGNGRVTEFKYGAKLGTVVRKWSGEKM-S-YLKNWGEGW---G---F---MPSDRALVFVDNHDNQRGHGAGG-S----S---ILTFWDARL-YK-VAVGFM-L-AHPYGFT---------RVMSSYRWARNFVNGEDVNDWIGPPNNNGVIKE------------------V------TINA--DTTCG--------N----D-----W---VCEHR----W----REIRNMVWFRNVV---DG-QPFANWW-D-N-GSNQVAFG-RGNRG-FIVFNNDDWQLSSTLQTGLPGGTYCN-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
64 HHSearch 46.3422% -61 - C2 -4X9Y AMYP_HUMAN A:[4-494] ------------------------------------------PNTQQGRT--S--IVHLFEWRWVDIALECE-RY-LAPKGFGGVQVSPPNE--NVAIY---NPFRPWWERYQPVSY-KLCTRSGNEDEFRNMVTRCNNVGVRIYVDAVINHMC-----------GNAVSAGTSSTCGSYF-------------NPGS----RDFPAVP-------------YS-----GWD---F-------NDGKCKTGSGD-----IE--NY-NDATQVRDCRLTGLLDLALEKDYVRSKIAEYMNHLIDIGVAGFRLDASKHMWP----------------GDIKAI------LD-------------KLHNLNSNWFPAGSKPFIYQEV--IDLGGEPIKS--SDYFGNGRVTEFKYGAKLGTVIRK----WN-GEKMSYLKNWGEGWG---F---VPSDRALVFVDNHDN-QRGHGAG-GASILT---FWDARLYKMAVG-FMLAHPYG-FTRVMSSYR-------W-----------------------PRQFQ--NG------------------NDVNDWVGPPN--NNGVIKEVTINPDT----T-----C---GNDWVCEHRW----RQIRNMVIFRNVVD--GQ-PFTNWYD-NGS-NQVAFGRG---NRG-FIVFNNDDWSFSLTLQTGLPAGTYCDVISG---------DKINGNCTGIK-----------IYVSDDGKAH-FSISNSAED---PFIAIHAES------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18 PsiBlast_PDB 45.4323% -53 - C2 -1XGZ AMYP_HUMAN A:[3-449] -------------------------------------------SPNTQQGRTS--IVHLFEWRWVDIA-LEC-ERYLAPKGFGGVQVSPPN-----ENVAIYNPFRPWWERYQPVSYKLCTRS-GNEDEFRNMVTRCNNVGVRIYVDAVINHMC-----------GNAV----------SAGTSSTCGSYFNPGSRDF----P-----A-------------VPYS---GWD---FNDGKCKTGS-------GD-----IE--NY-NDATQVRDCRLTGLLDLALEKDYVRSKIAEYMNHLIDIGVAGFRLDASKHM-WPGDIKAILDKLHNLNSNWFP---------A-------------G------------SKPFIYQEVIDLGGEPI--KS--SDYFGNGRVTEFKYGAKLGTVIRK----WNGE-KMSYLKNWG---E---GWGFVPSDRALVFVDSHDNQRGHGAGG-A----S---ILTFWDARL-YK-MAVGFM-L-AHPYGFT---------RVMSSYRW----------------PRQFQ--NGNDVNDWVGPPNNNGVIKEV------TINP--DTTCG--------N----D-----W---VCEHR----W----RQIRNMVIFRNVV---DG-QPFTNWY-D-N-GSNQVAFG-RGNRG-FIVFNNDDWSFSLTLQTGLPAGTY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 PsiBlast_PDB 45.3623% -53 - C2 -1XH1 AMYP_HUMAN A:[3-449] -------------------------------------------SPNTQQGRTS--IVHLFEWRWVDIA-LEC-ERYLAPKGFGGVQVSPPN-----ENVAIYNPFRPWWERYQPVSYKLCTRS-GNEDEFRNMVTRCNNVGVRIYVDAVINHMC-----------GNAV----------SAGTSSTCGSYFNPGSRDF----P-----A-------------VPYS---GWD---FNDGKCKTGS-------GD-----IE--NY-NDATQVRDCRLTGLLDLALEKDYVRSKIAEYMNHLIDIGVAGFRLDASKHM-WPGDIKAILDKLHNLNSNWFP---------A-------------G------------SKPFIYQEVIDLGGEPI--KS--SDYFGNGRVTEFKYGAKLGTVIRK----WNGE-KMSYLKNWG---E---GWGFVPSDRALVFVDSHDNQRGHGAGG-A----S---ILTFWDARL-YK-MAVGFM-L-AHPYGFT---------RVMSSYRW----------------PRQFQ--NGNDVNDWVGPPNNNGVIKEV------TINP--DTTCG--------N----D-----W---VCEHR----W----RQIRNMVIFRNVV---DG-QPFTNWY-D-N-GSNQVAFG-RGNRG-FIVFNNDDWSFSLTLQTGLPAGTY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 PsiBlast_PDB 45.0423% -55 - C2 -1XH0 AMYP_HUMAN A:[3-449] -------------------------------------------SPNTQQGRTS--IVHLFEWRWVDIA-LEC-ERYLAPKGFGGVQVSPPN-----ENVAIYNPFRPWWERYQPVSYKLCTRS-GNEDEFRNMVTRCNNVGVRIYVDAVINHMC-----------GNAV----------SAGTSSTCGSYFNPGSRDF----P-----A-------------VPYS---GWD---FNDGKCKTGS-------GD-----IE--NY-NDATQVRDCRLTGLLDLALEKDYVRSKIAEYMNHLIDIGVAGFRLDASKHM-WPGDIKAILDKLHNLNSNWFP---------A-------------G------------SKPFIYQEVIDLGGEPI--KS--SDYFGNGRVTEFKYGAKLGTVIRK----WNGE-KMSYLKNWG---E---GWGFVPSDRALVFVDSHDNQRGHGAGG-A----S---ILTFWDARL-YK-MAVGFM-L-AHPYGFT---------RVMSSYRW----------------PRQFQ--NGNDVNDWVGPPNNNGVIKEV------TINP--DTTCG--------N----D-----W---VCEHR----W----RQIRNMVIFRNVV---DG-QPFTNWY-D-N-GSNQVAFG-RGNRG-FIVFNNDDWSFSLTLQTGLPAGTY---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
68 HHSearch 44.4721% -61 - C2 -1G94 AMY_PSEHA A:[2-445] ------------------------------------------------PT--T--FVHLFEWNWQDVA-QECEQY-LGPKGYAAVQVSPPNE--HITG-------SQWWTRYQPVSY-ELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLINHMA-----------AGSG----------TG-------------TAGNSFGNK-----S-------------FPIYSPQDFH---E--------S-------CT-----INNSDYGNDRYRVQNCELVGLADLDTASNYVQNTIAAYINDLQAIGVKGFRFDASKHVAA----------------SDIQSL------MA-------------KVN----------GSPVVFQEV--IDQGGEAVGA--SEYLSTGLVTEFKYSTELGNTFRN----GS-L---AWLSNFGEGWG---F---MPSSSAVVFVDNHDN-QRGHGGA-G----NVITFEDGRLYDLANV-FMLAYPYG-YPKVMSS---------------------------------YDFHG--DT------------------D------AGGP--NVPVH--------N----NGNLECF---ASNWK----CEHRWSYIAGGVDFRNNTADNWA-VTNWWDN-T-N-NQISFGRG---SSG-HMAINKEDSTLTATVQTDMASGQYCNVLKG---------E---------LSADAKSCSGEVITVNSDGTIN-LNIGA---W---DAMAIHKNA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 PsiBlast_PDB 44.1224% -58 - C2 -1CLV AMY_TENMO A:[12-444] ----------------------------------------------------S--IVHLFEWKWNDIA-DEC-ERFLQPQGFGGVQISPPNEYLVADGRP-------WWERYQPVSYIINTRS-GDESAFTDMTRRCNDAGVRIYVDAVINHMTGMNGVGTSGSSADHD----------GM-------------N--Y----P-----A-------------VP-----YGSGDFH-------SP-------CE-----VN--NY-QDADNVRNCELVGLRDLNQGSDYVRGVLIDYMNHMIDLGVAGFRVDAAKHMS-PGD--------LSVIFSGLKNLNTDYGFAD-------------G------------ARPFIYQEVIDLGGEAI--SK--NEYTGFGCVLEFQFGVSLGNAFQG----GN-Q--LKNLANWG---P---EWGLLEGLDAVVFVDNHDN-QRTGGSQ-IL---T---YKNPKPYKMAIAFMLAHPY-G-TTRIMSSFDFTDNDQGP-----------------------PQDGS--GN------------------L------ISPG--INDDN--------T----C-----S---NGYVC----EHRW-RQVYGMVGFRNAV---EG-TQVENWW-S-N-DDNQIAFS-RGSQGFVAFTNGGDLNQNLNTG--LPAGTY-------------------------------------CDV-ISGELSGGSCTG---K---SVTV-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------