@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu03240: (2016-06-05 )
MFRLLVLMGFTFFFYHLHASGNLTKYINMKYAYLSFIAIFLLAILTAVQAYLFIKSPEKSGHHHDHDCGCGHDHEHDHEQNKPFYQRYLIYVVFLFPLVSGIFFPIATLDSSIVKTKGFSFKAMESGDHYSQTQYLRPDASLYYAQDSYDKQMKQLFNKYSSKKEISLTDDDFLKGMETIYNYPGEFLGRTIEFHGFAYKGNAINKNQLFVLRFGIIHCIADSGVYGMLVEFPKDMDIKDDEWIHIKGTLASEYYQPFKSTLPVVKVTDWNTIKKPDDPYVYRGF
Atome Classification :
(20 SA)
-------------------------------------------------------------------.........--10-....--.....20........30........40..-------......50.......--.60----.........70....----....---80........----90---------.........100-------..-----------------------------.....110...-....120....---------------...130.......140....------...150.......---160.----------.....---.170..----.....180..--.....190---------------...----.....-----.200..---.--.-...210..-----.---.----...220.----------.-.-----..--..-..230----.--..----.----.--.-...-240-.....-------------.----..250.....-..--260....----...----.270.......280...
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-------------------------------------------------------------------M
F
R
L
L
V
L
M
G
--
F
--
T
F
F
F
--
Y
HLHASGN
L
T
K
Y
I
N
M
K
Y
A
Y
L
S
F
I
A
I
F
L
L
A
-------
I
L
T
A
V
Q
A
Y
L
F
I
KSPE--KS-----GHHHDHDCGCGHDHE----HDHE---QN
K
P
F
Y
Q
R
Y
L
----
I
----------
Y
V
V
F
L
F
P
L
V
S
G
I
-------
F
F
-----------------------------
P
I
A
TLDS
S
I
VK-TKG
F
S
F
K
AMES---------------GDHYSQTQYLRPDA
S
L
Y
Y
AQ------D
S
Y
D
K
Q
M
K
Q
L
F
N
K
---YSSK----------
K
E
ISL---T
D
D
D
F
L
----
K
G
M
E
T
I
YNY
P
--
G
E
F
LG
R
-----------------
T
I
E
----
F
H
G
F
A
-----YKGNAI---N--K-N
Q
L
F
V
L
R
F
-----
G
---
I
----
I
H
CI--A----------D-S-----G
V
--
Y
G
-
M
LV------E--FP----K----D--M-DIK-DD--
E
W
I
H
I
-------------
K
----G
T
L
A
S
E
Y
Y
Q
P
-
F
K
--S-TL
P
V
V
----
K
VT----DWNTIKKPDDPYVYRGF
29
Fugue
71.02
18%
-100
- C2 -
4B46
1
CETZ1_HALVD
A:
[1-367]
-------------------------------------------------------------------
M
K
--
L
A
M
I
G
--
F
---------
G
Q
A
G
G
K
V
V
D
K
F
V
E
Y
D
R
E
R
N
A
G
I
V
R
A
A
V
A
-------
V
N
S
A
K
A
D
L
L
G
L
K
N
I
P
--
K
D
Q
R
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L
I
G
Q
S
R
V
K
G
H
G
V
G
A
D
N
E
----
L
G
A
E
I
A
E
E
D
I
D
E
V
Q
G
A
I
D
S
IP
V
----------
H
E
V
D
A
F
L
V
V
S
G
L
GGG
T
G
S
G
G
A
-----------------------------
P
V
L
A
K
H
L
K
R
I
Y
-
T
E
P
V
Y
G
L
G
I
L
P
---------------
G
S
D
E
G
G
I
Y
T
L
N
A
A
R
S
F
Q
T
F
V
------
R
E
V
D
N
L
L
--
V
F
D
N
---
D
A
W
R
----------
K
T
G
E
S
---
V
Q
G
G
Y
D
----
E
I
N
E
E
I
V
N
R
F
--
G
V
L
F
G
S
VVD
S
S
E
I
I
N
T
L
AGG
G
V
S
T
V
G
----
Y
A
S
E
G
-----
V
T
A
H
T
T
---
N
--
R
-
I
T
S
L
V
R
K
A
-----
A
---
L
GRLT
L
P
C
E
--
I
----------
E
-
G
-----
A
E
--
R
A
-
L
L
V
L
A
G
PPE
H
--
L
N
----
R
----
K
--
G
-
I
E
R
-
G
R
--
K
W
I
E
E
-------------
Q
TGSM
E
V
R
G
G
D
Y
P
I
P
-
G
A
--
E
-
K
V
A
G
V
I
L
L
S
G
V
T
----
N
V
P
R
I
K
E
L
Q
Q
V
A
I
E
A
Q
D
26
HHSearch
56.29
11%
-150
- C4 -
3ULP
-
?
A:
[84-194]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
I
M
----
L
I
G
R
V
-----
G
C
E
P
D
I
---
K
I
L
N
-
G
G
D
K
V
A
T
F
-----
S
---
L
----
A
T
N
E
--
F
W
R
D
RNTN
E
L
K
S
K
T
-----
D
W
--
H
R
-
I
V
V
------
Y
--
D
Q
N
I
V
D
L
I
---
D
--
K
-
Y
L
R
-
K
G
--
R
R
V
Y
V
-------------
Q
----
G
S
L
H
T
R
K
W
H
T
--
S
Q
P
K
-
Q
I
T
E
I
----
I
L
S
Y
NK
G
D
L
I
F
L
D
-----------
24
HHSearch
55.15
11%
-169
* C4 *
4GS3
-
?
A:
[9-103]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
N
-----------------
T
V
T
----
L
V
G
K
V
-----
F
T
P
L
E
F
---
S
HE
L
-
Y
G
E
K
F
F
N
F
-----
I
---
L
----
E
V
P
R
--
L
----------
S
-
E
-----
T
K
--
D
Y
-
L
P
I
------
T
--
I
S
N---
R
LFEG
M
----
N
L
E
-
V
G
--
T
R
V
K
I
-------------
E
----
G
Q
L
R
S
Y
N
R
-------
K
-
L
I
L
T
V
----
F
A
R
----
D
I
S
V
V
P
-----------
37
Fugue
52.77
19%
-73
- C1 -
4NY2
4
?
A:
[5-408]
------------------------------------------------PK
G
T
I
Y
L
T
F
D
DGPV
N
A
S
V
E
V
I
K
V
L
N
Q
G
G
--
V
K
A
T
F
Y
F
NA
W
H
L
D
G
I
G
D
E
N
E
D
R
A
L
E
A
L
K
L
A
L
D
S
G
H
I
V
G
N
HSYDHM
I
H
N
C
V
E
E
F
G
P
T
S
G
A
D
C
N
A
T
-----
G
N
H
Q
I
H
S
Y
Q
D
P
V
R
D
A
----
A
S
F
E
---
Q
N
L
I
T
L
E
K
Y
L
----
P
TIRSYPNYKG
Y
E
L
A
R
L
P
Y
T
N
G
W
-------
R
V
TKH
F
Q
A
D
GLCATSDNLKPWEPG
Y
V
C
D
PAN
P
S
N
S
V
K
A
S
I
Q
V
-
Q
N
I
L
A
N
Q
G
Y
Q
T
H
G
W
DVDWAPENWGIP
M
P
A
N
S
L
T
E
A
V
P
F
L
A
Y
V
D
K
A
L
------
N
S
C
S
P
T
T
I
E
P
I
N
S
---
K
T
Q
E
FPCGTPLHAD
K
V
I
V
L
---
T
H
D
F
L
F
EDGK
R
G
M
G
A
T
Q
N
L
P
K
L
A
E
F
I
R
I
-----------------
A
K
E
A
G
Y
V
F
D
T
M
D
NYTPR
W
S
V
G
K
T
---
Y
--
Q
-
A
G
E
Y
V
L
Y
Q
-----
G
---
V
----
V
Y
K
A
--
V
----------
I
-
S
-----
H
T
-------
A
------
Q
--
Q
D
----
W
----
A
--
P
-
S
S
T
-
S
S
--
L
W
T
N
A
DPATNWTLNVSYE
Q
----
G
D
I
V
N
Y
K
G
K
R
-
Y
L
--
V
-
S
V
P
H
V
----
S
Q
Q
----
D
W
-
T
P
D
T
Q
N
T
L
F
T
A
L
E
L
8
HHSearch
51.33
17%
-182
- C4 -
4GNX
-
?
A:
[14-75]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
Q
Y
V
G
Q
-----------------
T
V
R
----
I
V
G
K
V
-----
H
K
V
T
----------
G
----
N
T
L
-----
L
---
M
----
Q
T
S
--------------
D
-
L
-----
G
N
--
V
E
---
I
------
A
--
M
T
----
P
----
D
--
S
-
D
V
S
-
S
S
--
T
F
V
E
V
-------------
T
----
G
K
V
S
D
A
G
-------------------------------------------
15
HHSearch
51.29
19%
-165
- C4 -
3KF6
-
B:
[514-573]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
C
K
D
G
Q
-----------------
K
L
R
----
F
L
G
C
V
-----
Q
S
Y
K
----------
N
G
I
L
R
L
----------------
I
D
---------------
G
--------
S
--
S
S
-
V
T
C
------
D
--
V
T
----
V
----
V
LP
D
V
S
I
Q
-
K
H
--
E
W
L
N
I
-------------
V
----
G
R
K
R
Q
D
G
-------------------------------------------
21
HHSearch
51.00
6%
-152
- C4 -
4GN4
1
?
B:
[17-106]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
H
G
S
-----------------
E
V
V
----
V
A
G
W
V
-----
A
H
L
G
D
Y
---
G
--
R
-
V
K
I
V
K
V
S
D
REGGA
A
---
V
----
P
V
Y
L
--
E
----------
R
-
G
------
K
--
T
P
-
D
H
L
------
F
---
K
----
V
----
F
--
A
-
E
L
S
-
R
E
--
D
V
V
V
I
-------------
K
----
G
I
V
E
A
S
E
Q
Y
G
-
S
A
--
T
-
G
-
V
E
I
----
F
P
S
----
E
I
W
I
L
N
-----------
13
HHSearch
50.70
15%
-177
- C4 -
4JOI
-
TEN1L_HUMAN
D:
[12-97]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
W
E
V
S
A
-
G
--
Q
V
P
D
G
S
-----------------
T
L
R
----
T
F
G
R
L
-----
C
L
Y
D
M
I
--------
Q
S
R
V
T
L
M
A
-----
Q
---
H
----
G
-----
S
----------
D
-
Q
---------
H
Q
-
V
L
V
------
C
--
T
K
LV--
E
----
P
--
F
-
H
A
Q
-
V
G
--
S
L
Y
I
V
-------------
L
----
G
E
L
Q
H
Q
Q
D
---------
R
G
S
V
V
----
K
A
R
----
V
L
T
C
V
------------
18
HHSearch
50.28
11%
-112
- C4 -
1WYD
-
SYDND_SULTO
A:
[12-99]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
E
Y
D
G
K
-----------------
E
V
I
----
W
A
G
W
V
-----
H
L
L
R
D
L
---
G
--
G
-
K
K
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I
I
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R
D
-----
K
T
G
L
G
----
Q
V
V
V
--
D
----------
K
-
N
-----
S
---
S
-----------
A
--
F
G
----
I
----
S
--
Q
-
E
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T
-
Q
E
--
S
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I
Q
V
-------------
R
----
G
I
V
K
A
D
K
R
----
A
--
P
-
R
G
I
E
L
----
H
A
E
----
E
I
T
L
L
S
K
A
---------
23
HHSearch
49.62
11%
-195
- C4 -
1TXY
-
PRIB_ECOLI
A:
[4-100]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
L
V
----
L
S
G
T
V
-----
C
R
A
P
L
R
---
K
V
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P
-
S
G
I
P
H
C
Q
F
-----
V
---
L
----
E
H
R
S
V
Q
E
----------
E
-
A
G
F
H
R
Q
A
W
C
Q
M
P
-
V
I
V
------
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--
G
H
----
E
N
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A
I
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--
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S
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V
G
--
S
R
I
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Q
----
G
F
I
S
C
-------------
K
M
V
L
----
H
A
E
----
Q
I
E
L
I
------------
22
HHSearch
49.33
7%
-132
- C4 -
3NEM
-
SYD_THEKO
A:
[12-100]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
E
L
N
G
Q
-----------------
K
V
K
----
V
A
G
W
V
-----
W
E
V
K
D
L
---
G
--
G
-
I
K
F
L
W
I
R
D
-----
R
D
G
I
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----
Q
I
T
A
--
P
----------
K
-
K
------
K
--
V
D
-
P
E
L
---------
F
K
----
L
----
I
--
P
-
K
L
R
-
S
E
--
D
V
V
A
V
-------------
E
----
G
V
V
N
F
T
P
K
----
A
--
K
-
L
G
F
E
I
----
L
P
E
----
K
I
V
V
L
N
R
----------
11
HHSearch
49.10
12%
-152
- C4 -
3KDF
1
RFA3_HUMAN
A:
[18-76]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
Q
F
I
D
K
-----------------
P
V
C
----
F
V
G
R
L
-----
E
K
I
H
P
T
------
G
-
K
M
F
I
-------------
L
----
S
D
G
--------------
E
-
G
-----
K
N
--
G
T
-
I
--------
E
--
L
M
----
E
----
P
--
L
-
D
E
E
-
I
S
--
G
I
V
E
V
-------------
V
----
G
R
V
T
A
K
--------------------------------------------
20
HHSearch
48.95
14%
-172
- C4 -
3FHW
1
PRIB_BORPA
A:
[3-100]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
L
E
----
L
S
A
R
V
-----
L
E
C
G
A
M
---
R
HT
P
-
A
G
L
P
A
L
E
L
-----
L
---
L
----
V
H
E
S
--
E
----------
V
-
V
E
AGR
R
V
E
--
L
T
-
I
S
A
------
V
A
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G
D
L
A
--
L
L
---
L
--
A
-
D
T
P
-
L
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--
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E
M
Q
V
-------------
Q
----
G
F
L
A
P
A
R
K
---
D
---
S
-
V
K
V
K
L
----
H
L
Q
----
Q
A
R
R
I
A
G
S
M
--------
30
Fugue
48.60
23%
-99
- C2 -
5B0O
-
?
E:
[5-139]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
I
H
A
R
M
Q
Q
L
V
S
-
E
F
Q
N
T
L
D
A
L
D
S
---------------
V
I
A
S
R
L
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Q
M
A
L
E
A
A
R
Q
V
I
G
Q
TPAVDN
S
A
L
I
K
Q
I
Q
Q
L
L
Q
Q
EPL
F
S
G
K
----------
P
Q
L
R
V
---
H
P
D
D
L
Q
----
R
--------
V
--
E
E
M
L
G
A
-----------------
T
L
S
----
L
H
G
W
R
-----
L
R
G
D
P
-------------
T
L
H
H
-----
G
---
G
----
C
K
V
S
--
A
----------
D
-
E
-----
G
---------------
D
--
L
D
----
A
----
S
--
V
-
A
T
R
-
W
Q
--
E
L
C
R
L
-------------
A
----
A
P
G
V
----------------------------------------------
14
HHSearch
47.92
8%
-118
- C4 -
2VW9
1
SSB_HELPY
A:
[4-109]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
V
I
----
M
V
G
R
L
-----
T
R
N
V
E
L
---
K
Y
L
P
-
S
G
S
A
A
A
T
I
-----
G
---
L
----
A
T
S
R
--
R
F
K
K
QDG
T
L
G
E
E
-
V
-----
C
F
--
I
D
-
A
R
L
------
F
--
G
R
----
T
A
E
I
A
N
--
Q
-
Y
L
S
-
K
G
--
S
S
V
L
I
-------------
E
----
G
R
L
T
Y
E
S
W
M
D
Q
T
G
K
K
N
-
S
R
H
T
I
----
T
A
D
----
S
L
Q
F
M
D
K
K
S
--------
17
HHSearch
47.54
9%
-128
- C4 -
1NNX
1
YGIW_ECOLI
A:
[36-107]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
D
T
-----------------
W
V
T
----
L
R
G
N
I
-----
V
E
R
I
S
-------
D
-
D
L
Y
V
F
K
---------------------------------
D
-
A
-----
S
G
---
T
-
I
N
V
------
D
--
I
D
----
H
KRWN
G
--
V
-
T
V
T
-
P
K
--
D
T
V
E
I
-------------
Q
----
G
E
V
D
K
D
W
N
----------
S
V
E
I
----
D
V
K
----
Q
I
R
K
V
------------
19
HHSearch
47.12
9%
-146
- C4 -
3KOJ
-
?
A:
[3-97]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
C
I
----
L
Q
A
T
V
-----
V
E
A
P
Q
L
---
R
Y
A
Q
D
N
Q
T
P
V
A
E
M
-----
V
---
V
----
Q
F
P
G
-------------
A
-
P
-----
A
R
--
L
K
-
V
V
G
------
W
--
G
A
----
V
A
Q
E
L
Q
--
D
-
R
C
R
-
L
N
--
D
E
V
V
L
-------------
E
----
G
R
L
R
I
N
S
---------E
K
Q
T
E
L
----
T
V
T
----
R
V
H
--------------
10
HHSearch
46.45
13%
-159
- C4 -
2PI2
-
RFA3_HUMAN
E:
[39-98]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
Q
F
I
D
K
-----------------
P
V
C
----
F
V
G
R
L
-----
E
K
I
H
P
-------
T
-
G
K
----
M
F
-----
I
---
L
----
S
D
G
--------------
E
-
G
-----
K
N
--
G
T
-
I
E
L
------
M
--
E
P
------------
L
-
D
E
E
-
I
S
--
G
I
V
E
V
-------------
V
----
G
R
V
T
A
K
A
-------------------------------------------
7
HHSearch
45.14
7%
-138
- C4 -
4HSP
5
?
A:
[47-147]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
P
V
V
--
K
A
L
D
G
I
-----------------
E
A
K
----
L
P
G
Y
I
-----
V
P
L
E
I
S
EAG
L
--
V
-
T
E
F
L
L
V
P
Y
-----
Y
---
G
----
A
C
I
H
--
V
----------
P
-
P
-----
P
P
S-
N
Q
I
V
Y
V
------
K
--
T
A
----
K
----
G
--
V
-
Q
M
D
E
L
Y
--
Q
P
F
W
V
-------------
E
----
G
T
F
K
V
E
N
A
S
S
E
L
A
--
A
-
A
G
Y
R
M
----
Q
A
S
----
K
V
T
P
Y
E
Y
----------
32
Fugue
43.35
10%
-69
* C3 *
2ZKL
2
?
A:
[1-369]
M
N
I
V
I
T
GAKG
F
V
G
K
N
L
K
A
D
L
T
S
T
T
D
H
H
I
F
E
V
H
RQTK
E
E
E
L
E
S
A
L
L
K
ADFIVHLAGVFSLGNVS
Y
L
D
H
V
L
D
I
L
T
R
N
T
KK
P
--
A
I
L
L
--
S
S
S
I
Q
A
T
Q
D
N
P
Y
G
E
S
K
L
Q
G
E
Q
L
L
R
E
Y
A
E
E
-------
Y
G
N
T
V
Y
I
Y
R
W
P
N
L
F
G
--
K
W
-----
C
K
P
N
Y
N
S
V
I
A
T
F
C
Y
K
I
A
R
N
E
E
I
Q
---
V
N
D
R
N
V
E
L
T
L
----
N
----------
Y
V
D
D
I
V
A
E
I
K
R
A
-------
I
E
-----------------------------
G
T
P
T
I
E
N
G
V
P
T
V
P
N
V
F
K
V
T
L
G
E
I
---------------
V
D
L
L
Y
K
F
K
Q
S
R
L
D
R
T
L
P
K
L
D
------
N
L
F
E
K
D
L
Y
S
T
Y
L
S
---
Y
L
P
S
----------
T
D
F
S
Y
P
L
L
M
N
V
D
D
R
----
G
S
F
T
E
F
I
K
T
P
--
D
R
G
Q
V
S
-----------------
V
N
I
----
S
K
P
G
I
-----
T
K
G
N
H
W
---
H
--
H
-
T
K
--
N
E
K
F
-----
L
---
V
----
V
S
G
K
--
G
----------
V
-
I
-----
R
F
--
R
H
-
V
N
D
------
D
--
E
I
----
I
----
E
--
Y
-
Y
V
S
-
G
D
K
L
E
V
V
D
I
-------------
P
----
V
G
Y
T
H
N
I
E
N
L
-
G
D
--
T
-
D
M
V
T
I
----
M
W
V
----
N
E
M
F
D
P
N
Q
P
D
T
Y
F
L
E
V
-