@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : bsu03360: (2016-06-05 )
MKKIPVTVLSGYLGAGKTTLLNSILQNREGLKIAVIVNDMSEVNIDAGLVKQEGGLSRTDEKLVEMSNGCICCTLREDLLIEVEKLAKDGRFDYIVIESTGISEPIPVAQTFSYIDEEMGIDLTKFCQLDTMVTVVDANRFWHDYQSGESLLDRKEALGEKDEREIADLLIDQIEFCDVLILNKCDLVSEQELEQLENVLRKLQPRARFIRSVKGNVKPQEILHTGLFNFEEASGSAGWIQELTAGHAEHTPETEEYGISSFVYKRRLPFHSTRFYRWLDQMPKNVVRAKGIVWCASHNNLALLMSQAGPSVTIEPVSYWVAALPKLEQEQVKQQEPEILEEWDPEFGDRLTQLVFIGTDLDEETITKELDQCLLTEYEFDSDWSLFEDPFKWKLNQ

Atome Classification :

(20 SA) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20.....-----.-.-----.30........40........---50......-..60........70....------.---.----.----.----80---..---.....---.-----.-----90----.........100....---.-..110.......120......---.130.......140.......150.......160.......170.......180.......190.--........200.......210.......220.......230....---...240.......250.......260.......270.......280----..----.....290.......300.......310....--...320.......330.......340.......-350.........360.....-..370.......380.......390.....---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKKIPVTVLSGYLGAGKTTLLNSILQ-----N-R-----EGLKIAVIVNDMSEVNIDAGL---VKQEGGLS-RTDEKLVEMSNGCICCTL------R---E----D----L----L----IE---VEKLA---K-----D-----G-----RFDYIVIESTGISEPI---P-VAQTFSYIDEEMGIDLTKFCQ---LDTMVTVVDANRFWHDYQSGESLLDRKEALGEKDEREIADLLIDQIEFCDVLILNKCDLVSE--Q--ELEQLENVLRKLQPRARFIRSVKGNVKPQEILHTGLFNFEEASGS---AGWIQELTAGHAEHTPETEEYGISSFVYKRRLPFHSTRFYRWLDQM----PK----NVVRAKGIVWCASHNNLALLMSQAGPSVTIEP--VSYWVAALPKLEQEQVKQQEPEILEEWDPEFGD-R--LTQLVFIGTDLDEETIT-KELDQCLLTEYEFDSDWSLFEDPFKWKLNQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21 HHSearch 90.9031%-136 - C4 -1NIJ - YJIA_ECOLI A:[2-317] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NPIAVTLLTGFLGAGKTTLLRHILN-----E-Q-----HGYKIAVIENEFGEVSVDDQL---IGD-------RATQIKTLTNGCICCSR------S---N----E----L----E----DA---LLDLL---D-----NLDKGNI-----QFDRLVIECTGMADPG---P-IIQTFFSHE-----VLCQRYL---LDGVIALVDAVHADEQMNQ-------------------FTIAQSQVGYADRILLTKTDVAGE------AEKLHERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEENVVS---------TKP-R-FHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESAD----KLLRYKGMLWIDGEPN-RLLFQGVQRLYSADW--DRPW---------GD----------------EK-P--HSTMVFIGIQLPEEEIR-AAFAGLR--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
41 Fugue 88.9129%-131 - C4 -1NIJ - YJIA_ECOLI A:[2-318] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NPIAVTLLTGFLGAGKTTLLRHILN-----E-Q-----HGYKIAVIENEFGEVSVDDQL---IGDRA-------TQIKTLTNGCICCSR------S---N----E----L----E----DA---LLDLL---D-----N-----LDKGNIQFDRLVIECTGMADPG---P-IIQTFFS-----HEVLCQRYL---LDGVIALVDAVHADEQMNQF-------------------TIAQSQVGYADRILLTKTDVAGE--A----EKLHERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEE-----------NVVSTKPRFHFIADKQNDISSIVVELDYPVDISEVSRVMENL----LLESADKLLRYKGMLWIDGEPNRLLFQGVQ--------------------------RLYSADWDRPWGDE--K-P--HSTMVFIGIQLPEEEIR-AAFAGL----------------------RK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 81.6627%-124 - C4 -1NIJ - YJIA_ECOLI A:[2-309] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NPIAVTLLTGFLGAGKTTLLRHILN-----E-Q-----HGYKIAVIENEFGEVSVDDQL---IGDRATQI-KT------LTNGCICCSR------S---N----E----L----E----DA---LLDLL---DNLDKGN-----I-----QFDRLVIECTGMADPG---P-IIQTF--FSHEV------LCQRYLLDGVIALVDA----------------VHADEQMNQFTIAQ---SQVGYADRILLTKTDVAGE--A----EKLHERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEE-----------NVVSTKPRFHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESAD----KLLRYKGMLWIDGEPNRLLF----------QG--VQRLYSA------------------DWDRPWGD-EKPHSTMVFIGIQLPEEEI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 81.4226%-120 - C4 -4IXN YJIA_ECOLI A:[1-309] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNPIAVTLLTGFLGAGKTTLLRHILN-----E-Q-----HGYKIAVIANEFGEVSVDDQL---IGDRATQI-KT------LTNGCIAASR------S---N----E----L----E----DA---LLDLL---DNLDKGN-----I-----QFDRLVIECTGMADPG---P-IIQTF--FSHEV------LCQRYLLDGVIALVDA----------------VHADEQMNQFTIAQ---SQVGYADRILLTKTDVAGE--A----EKLHERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEE-----------NVVSTKPRFHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESAD----KLLRYKGMLWIDGEPNRLLF----------QG--VQRLYSA------------------DWDRPWGD-EKPHSTMVFIGIQLPEEEI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 79.0927%-119 - C4 -4IXM YJIA_ECOLI A:[1-309] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNPIAVTLLTGFLGAGKTTLLRHILN-----E-Q-----HGYKIAVIENEFGEVSVDDQL---IGDRATQI-KT------LTNGCICCSR------S---N----E----L----E----DA---LLDLL---DNLDKGN-----I-----QFDRLVIECTGMADPG---P-IIQTF--FSHEV------LCQRYLLDGVIALVDA----------------VHADEQMNQFTIAQ---SQVGYADRILLTKTDVAGE--A----EKLHERLARINARAPVYTVTHGDIDLGLLFNTNGFMLEE-----------NVVSTKPRFHFIADKQNDISSIVVELDYPVDISEVSRVMENLLLESAD----KLLRYKGMLWIDGEPNRLLF----------QG--VQRLYSA------------------DWDRPWGD-EKPHSTMVFIGIQLPEEEI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
50 Fugue 58.8719% -64 - C4 -4XC8 ICMF_CUPMC A:[42-1113] GPANKVRFVTAASLFDGHDASINIMRRILQSQGCEVIHLGHNRSVQEVVTAALQEDVQGIAISSYQGGHVEYFKYMIDLLREHGGEHIQVFGGGGGVIVPDEIRELQAYGVARIYSPEDGQRMGLAGMITDMAQRCDIDLTRYAPTTLDTVVAGDRRALAQLITALENGKADPELVSALHAQAKAAAVPVLGITGTGGAGKSSLTDELIRRFRLDQ-D-----DALSIAVISIDPSRRKSGGAL---LGDRIRMN-AINHPNIFMRSLATREAG------S---E----I----SQA--L----PD---VIAAC---K-----A-----A-----RFDLVIVETSGIGQGD---A---------------AIVPHVD---LSLYVMTPEFGA--------ASQLEK----------------IDMLDFADFVAINKFD--RK--G--AQDAWRDVAKQVQRNREQWHS---RAEDMPVYGTQASRFNDDGVTMLYQGLVGALGARGMSLKPGTLPNLEGRISTGQNVIVPPAR-SRYLAEL----AD----TVRAYHRRVVAQSKLARERQQLRAAHDMLQGAGHESAALETLASERDVSLGAVERKLLAMWPQMQQAYS--GDEYVEIRTGLISTTLSGTKIRKVVLPRFEDEGEI------LKWLMRENVPGSFPYTAGVFAFKREGEDPTRMFAGEGDAFRTNRRFKLVSEGMEAKRLSTAFDSVTLYGEDPHERPDIYGKVGNSGVSIATLEDMKVLYDGFDLTNPSTSVSMTINGPAPTILAMFMNTAIDQQIDRFRADNGRDPTADEEAKIRAWVLQNVRGTVQADILKEDQGQNTCIFSTEFSLKVMGDIQEYFVHHQVRNFYSVSISGYHIAEAGANPISQLAFTLANGFTYVEAYLARGMHIDDFAPNLSFFFSNGMDPEYSVLGRVARRIWAVTMRDKYGANDRSQKLKYHIQTSGRSLHAQEIDFNDIRTTLQALIAIYDNCNSLHTNAYDEAITTPTAESVRRALAIQLIINREWGVAKCENPNQGSFLIEELTDLVEEAVLQEFERIAERGGVLGAMETGYQRGKIQEESLYYEQLKHDGTLPIIGVNTFRNPNGDPRSSEDEKQSQLHRLTEFHGAHQADAEAMLARLRQAVIDNRNVFAVLMDAVRVCSLGQITHALFEVGGQYRRNM
22 HHSearch 53.4921%-131 - C4 -2HF9 HYPB_METJA A:[37-204] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GVVAFDFMGAIGSGKTLLIEKLID-----N-LK----DKYKIACIAGDVIA-KFDAER---MEK-------HGAKVVPLNTGKECHLD------A---H----L----V----G----HA---LEDLN---------L-----D-----EIDLLFIENVGNLICP---A----DF-------------DLG---THKRIVVISTTEGDDTI----------------------EKHPGIMKTADLIVINKIDLADAVGA--DIKKMENDAKRINPDAEVVLLS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35 HHSearch 52.9720%-148 * C4 *3P32 Y1496_MYCTU A:[78-233] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NAHRVGITGVPGVGKSTAIEALGM-----H-LIE---RGHRVAVLAVD------------------------MARLAVHPNAYIRPSP-----------GTLGG----V----TRAT-RE---TVVLL---E-----A-----A-----GFDVILIETVGVGQSE---V---A--------------VANM---VDTFVLLTLARTGDQ-L---------------------QGIKKGVLELADIVVVNKADGEHH--K------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24 HHSearch 52.7119%-137 - C4 -4LPS HYPB_HELPY A:[44-214] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EGLYVLNFMSSPGSGKTTMLENLAD-----F-K------DFKFCVVEGDLQ-TNRDADR---LRK-------KGVSAHQITTGEACHLE------A--------S----M----I----EG---AFDLL---KDEGA-L-----E-----KSDFLIIENVGNLVCP---S----SY-------------NLG---AAMNIVLLSVPEGDDKVL----------------------KYPTMFMCADAVIISKADMVEVFNF--RVSQVKEDMQKLKPEAPIFLMS------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31 HHSearch 51.4724%-129 - C4 -4XC8 ICMF_CUPMC A:[228-399] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVPVLGITGTGGAGKSSLTDELIR-----R-FRLDQDDALSIAVISIDPSRRKSGGAL---LGD--------RIRMNAINHPNIFMRSLATREAG---S----E----I----S----QA---LPDVIAACK-----A-----A-----RFDLVIVETSGIGQGD---A-AI----------------VPH---VDLSLYVMTPEFGAASQ----------------------LEKIDMLDFADFVAINKFDRKGA--Q------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 HHSearch 50.8523% -93 - C4 -4HI0 UREG_HELPY E:[1-178] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MVKIGVCGPVGSGKTALIEALTR-----H-MS----KDYDMAVITNDIYTKE-DAEF---MCK-NSVM-PRERIIGVETGGCPHTAI------R---E----D----A----S----MNLEAVEEMH---GR----F-----P-----NLELLLIESGGDNL--------SA------------TFNPEL---ADFTIFVIDVAEGDKIP----------------------RKGGPGITRSDLLVINKIDLAPYVGA--DLKVMERDSKKMRGEKPFIFTNI-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 HHSearch 49.6421%-152 - C4 -2WWW MMAA_HUMAN A:[73-232] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAFRVGLSGPPGAGKSTFIEYFGK-----M-LTE---RGHKLSVLAVDP------------------------TELSRDMNAYIRPS----------------------TRTTN----EA---ILL-C---E-----G-----A-----GYDIILIETVGV--SE---F----AV-------------ADM---VDMFVLLLPPA----------------------------------IEMADLVAVTKSDGDLI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 HHSearch 48.4420%-119 - C4 -2P67 - ARGK_ECOLI A:[56-210] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TLRLGVTGTPGAGKSTFLEAFGM-----L-LIR---EGLKVAVIAVDPS---------------NDLARAEAAFIRPVPS-----G-------A---S----Q----R----A----RE---LMLLC---E-----A-----A-----GYDVVIVETVGVGQSE---T----EV-------------ARM---VDCFISLQIA-------Q---------------------GIKKGLMEVADLIVINKDDGDNH--T------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 HHSearch 48.4321%-114 - C4 -1YRB GPN_PYRAB A:[13-197] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ASMIVVFVGTAGSGKTTLTGEFGR-----Y-LE----DNYKVAYVNLDTGVKELPYEPSIDVRE-FVTV-EEIMREGYGPNGAIVESY------DRLME----K----F----N----EY---LNKIL---RL----E-----K-----ENDYVLIDTPGQMETF---L-FHEFGVR--------LMENLP---YPLVVYISDPEILKKPNDYC-------------FVRFFALLIDLRLGATTIPALNKVDLLSE--E--EKERHRKYFE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 HHSearch 47.8519%-175 - C4 -4NKR ? A:[1-114] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FPIVQVVGFQNSGKTTFIERILE-----K-ASE---QGLNLGCLKHH--------DR---YQA-------AGADVTAVEGAGVLQLT------A--------R----R----L----WD---LTRLI---ELYQ--F-----L-----ETDCLLIEGFKKA-PY---P-KVVILS-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40 HHSearch 46.3819%-129 - C4 -1J8M - SRP54_ACIAM F:[97-254] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IPYVIMLVGVQGTGKTTTAGKLAY-----F-YKK---KGFKVGLVGADVYRPAALEQL----QQ----------LGQQIGVPVYGEPG------E---K----D----V----VGIAKRG---VEKFL---------S-----E-----KMEIIIVDTAGRHGYGEEAA-LLEEMKN--------IYEAIK---PDEVTLVIDASIGQKAYD-------------------LASKFNQ-ASKIGTIIITKMDGTAK---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42 Fugue 45.7718% -90 - C4 -2WSM ? A:[11-213] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------LAENKRLAEKNREALRESGTVAVNIMGAIGSGKTLLIERTIE-----RIG-----NEVKIGAMLGDVVS-KADYER---VRRFG-------IKAEAISTGKECHLD------A---H----M----I----Y----HR---LKKFS---D------------------CDLLLIENVG---------------------------------------NLICPVDFDLGENYRVVMVSVTE--GDDVVEKHPEIFRV----ADLIVINKVALAEA--VGADVEKMKADAKLINPRAKIIEM---DLKTGKGFEEWIDFLRGILN--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 HHSearch 45.7719%-115 - C4 -2WSM ? A:[29-195] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTVAVNIMGAIGSGKTLLIERTIE-----R-IG----NEVKIGAMLGDVVSK-ADYER---VRR-------FGIKAEAISTGKECHLD------A---H----M----I----Y----HR---LKK-----------F-----S-----DCDLLLIENVGNLI---------CPVD-----------FDLG---ENYRVVMVSVTEGDDVV----------------------EKHPEIFRVADLIVINKVALAEAVGA--DVEKMKADAKLINPRAKIIEMDL-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37 HHSearch 45.1720%-112 - C4 -2V3C - SRP54_METJA C:[100-276] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QNVILLVGIQGSGKTTTAAKLAR-----Y-IQK---RGLKPALIAADTYRPAAYEQL----KQ-----------L-AEKIHVPIYGD------ETRTK----S----P----V----DI---VKEGME--K-----F-----K-----KADVLIIDTAGRHKEEK--G-LLEEMKQ--------IKEITN---PDEIILVIDGTIGQQAGI-------------------QAKAFKEAVGEIGSIIVTKLDGSA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
33 HHSearch 44.6319%-127 - C4 -3E70 ? C:[128-283] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KPYVIMFVGFNGSGKTTTIAKLAN-----W-LKN---HGFSVVIAASDTFRAGAIEQL---EEH---------AK--RIGVKVIKHSY------G---A----DPAAVA----Y----DA---IQHA----K-----A-----R-----GIDVVLIDTAGRSETN---RNLMDEMK--------KIARVTK---PNLVIFVGDALAGNAIVE-------------------QARQFN-EAVKIDGIILTKLDADAR---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------