@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : bsu12229: (2016-06-19 )
METKKEEYETKGYDTSIVYEFNEYPDARSGRCDNCDYTLFKSSVKGGKFLRECRRCGMKKNI

Atome Classification :

(20 SA) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10........20........30........---40...-.-.-.------------.---------.----.50........60.---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------METKKEEYETKGYDTSIVYEFNEYPDARSGRCDNCDYTL---F-KSS-V-K-G------------G---------K----FLRECRRCGMKKNI---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20 HHSearch 71.9529% -35 - C7 -5AUN HYPA_THEKO A:[69-116] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AVFKCRNCNYE----W-KLK-EVK-DKFDERIKEDIHFI---------PEVVHAFLACPKCGSH------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26 Fugue 70.7622% -92 - C6 -5A1F KDM5B_HUMAN A:[1-458] ---------------------------------------------------------------------------------------------------------------------------------------------------------SMFLPPPECPVFEPSWEEFADPFAFIHKIRPIAEQTGICKVRPPPDWQPPFACDVDKLHFTPRIQRLNELEAQTRVRDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKEFWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDSPEEEEYLDSGWNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMKKLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCVEHYRLLHRYCVFSHDEMICKMASKADVLDVVVASTVQKDMAIMIEDEKALRETVRKLGVIDSERMDFELLPDDER-QCVKCKTTC---F-MSA-I-S-C------------SCKPGLLVCLH----HVKELCSCPPYKYKLRYRYTLDDLYPMMNALKLRAE-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 68.2735%-209 - C11 -3BH6 XRP2_HUMAN B:[74-110] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYIFDHSATVTIDDCTNC--II---F-LGP-V-K-G------------S---------V----FFRNCRDC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 64.0635%-197 - C11 -3BH7 XRP2_HUMAN B:[74-110] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYIFDHSATVTIDDCTNC--II---F-LGP-V-K-G------------S---------V----FFRNCRDC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 Fugue 63.5127% -92 * C7 *4NL4 ? H:[18-747] --------------------------------------------------------------------------------------------------SVAHVALPVPLPRTFDYLLPEGMAVKAGCRVRVPFGKQERIGIVAAVSERSELPLDELKPVAEALDDEPVFSTTVWRLLMWAAEYYHHPIGDVLFHALPVMLRQGKPASATPLWYWFATEQGQVVDLNGLKRSRKQQQALAALRQGKIWRHQVGELEFNEAALQALRGKGLAELACEATDWRSAYSVAGERLRLNTEQATAVGAIHSAADRFSAWLLAGITGSGKTEVYLSVLENVLAQGRQALVMVPEIGLTPQTIARFRQRFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIVIGTRSSLFTPFKDLGVIVIDEEHDSSYKQQEGWRYHARDLAVWRAHSEQIPIILGSATPALETLHNVRQGKYRQLTLSKPAQQHVLDLKGQPLQAGLSPALISRMRQHLQADNQVILFLNRR-------GFAPALLC-HDCGWIAECPRCDS-YYTL---H-QAQ----------------------------H----HLR-CHHCDSQRPIPRQCPSCGSTHLVPVGIGTEQLEQALAPLFPEVPISRIDRHLAAVHRGGARILIGTQMLAKGHHFPDVTLVSLLDVDGALFSADFRSAERFAQLYTQVSGRAGRAGKQGEVILQTHHPEHPLLQTLLYKGYDAFAEQALAERQTMQLPPWTSHVLIRAEDHNNQQAPLFLQQLRNLLQASPLADEKLWVLGPVPALRWQILLQHPSRVRLQHIVSGTLALINTLPEAWVLDVDPIEG
1 PsiBlast_PDB 62.5235%-199 * C11 *2BX6 - XRP2_HUMAN A:[72-111] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------IYIFDHSATVTIDDCTNC--II---F-LGP-V-K-G------------S---------V----FFRNCRDC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35 Fugue 52.7925%-133 - C1 -2M8V - ? A:[1-33] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ADRGWIKLKDCPN---V-ISS-I-C-A------------G---------T----IITACKNCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 Fugue 52.2425%-124 * C9 *3NA7 ? A:[1-237] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LGSNTHLKQLIEISHLDKEIDSLEPLIREKRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIKSERELRSLNIEEDIAKERSNQANREIENLQNEIKRKSEKQEDLKKEMLELEKLALELESLVENEVKNIKETQQIIFKKKEDLVEKTEPKIYSFYERIRRWAKNTSIVT-------IKKQACGGCFIRLNDKI-YTE-V-L-T------------S---------G----DMITCPYCG---RILYAEGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34 Fugue 51.4618% 23 - C7 -2GAI - TOP1_THEMA A:[7-601] KYIVVESPAKAKTIKSILGNEYEVFASMGHIIDLPKSKFGVDLEKDFEPEFAVIKGKEKVVEKLKDLAKKGELLIASDMDREGEAIAWHIARVTNTLGRKNRIVFSEITPRVIREAVKNPREIDMKKVRAQLARRILDRIVGYSLSPVLWRNFKSNLSAGRVQSATLKLVCDREREILRFVPKKYHRITVNFDGLTAEIDVKEKKFFDAETLKEIQSIDELVVEEKKVSVKKFAPPEPFKTSTLQQEAYSKLGFSVSKTMMIAQQLYEGVETKDGHIAFITYMRTDSTRVSDYAKEEARNLITEVFGEEYVGAHEAIRPTNVFMTPEEAGKYLNSDQKKLYELIWKRFLASQMKPSQYEETRFVLRTKDGKYRFKGTVLKKIFDGYEKVWKTERNTGEFPFEEGESVKPVVVKIEEQETKPKPRYTEGSLVKEMERLGIGRPSTYASTIKLLLNRGYIKKIRGYLYPTIVGSVVMDYLEKKYSDVVSVSFTAEMEKDLDEVEQGKKTDKIVLREFYESFSSVFDRND-----RIVVDFPTNQKCSCGKEM---R-LSF-G-K-Y------------G---------F----YLK-CE-CGKTRSVKNDEIAVIDDGKIFL------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6 HHSearch 51.2521%-139 - C7 -1PFT TF2B_PYRFU A:[5-32] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QKVCPACESAE---L-IYD-P-E-R------------G---------E----I--VCAKCGY-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14 HHSearch 48.8328%-118 - C7 -5FJ8 RPC10_YEAST I:[4-32] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FCPSCNNML---L-ITS-G-D-S------------G---------V----YTLACRSCPYE------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27 Fugue 46.8425% -44 - C7 -5AF6 ZRAN1_HUMAN F:[7-34] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GIKWACEYCTYEN---W-PSA-I-K---------------------------------CTMCRAQRP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9 HHSearch 45.9129% -61 - C7 -3WWL LYSW_THET8 A:[3-30] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GTCPECGAEL---R-LEN-P-E--------------L---------G----ELVVCEDCGA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 HHSearch 45.6819% -71 - C7 -5FMF - T2EA_YEAST R:[119-155] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PNGYMCPICLTKY---T-QLE-A-V-QLLNFDR------T---------E----FL--CSLCDEP------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 HHSearch 45.4631% -83 - C7 -1TWF RPB9_YEAST I:[6-35] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FCRDCNNML---Y-PRE-D-KEN------------N---------R----LLFECRTCSYV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21 HHSearch 43.4728% -54 - C7 -5FLM RPB9_BOVIN I:[16-45] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FCQECNNML---YPKED-K-E-N------------R---------I----LLYACRNCDYQ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 HHSearch 42.3118% 1 - C7 -2D74 IF2B_PYRFU B:[103-136] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EYVICPVCGSPD---T-KII-K-R-D------------R---------F----HFLKCEACGAETP----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7 HHSearch 41.7021%-127 * C10 *1DL6 TF2B_HUMAN A:[10-38] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PRVTCPNHPDAI---L-VED-Y-R-A------------G---------D----M--ICPECGL-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22 HHSearch 41.4228% -43 - C7 -3QT1 RPB9_YEAST I:[26-55] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------FCRDCNNML---Y-PREDK-E-N------------N---------R----LLFECRTCSYV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15 HHSearch 40.7731%-103 - C7 -2LK0 A:[7-29] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DWLCNKCCLNN---F-RKR-L----------------------------------KCFRCGADKF----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------