@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu12680: (2016-06-19 )
MAKLTARFDLEDKVSKKLKRIHKGFQEVEKKVKTINRQIKISIRAEDQAFYRLRKINDYIILKFAKSLEIKVVLDDQVTSKLDAIERKLKRLPKETKLTVSLVDRTAAAYKKIKKMLSNQKLSFLLIPDDKVTSTVKRIIGYIKKNLKNGYTVKLKVIDEITKTVNRLTALLRKFEKTYYVKVVVKTKISDKINKKESLINKETSKKESDKSSDKGSDKNSDQKPGWVGKIKGWLKDWWTKSAWPWIKDTLNEIGKAFLDRFKERLIEKLKNDVFDKIIDKILGPQKKDDSGENSDTDKKVLNRNTGGNCCCDCCEGGISPGTKNKKTYRKKKSPTKAPNRTLKVPGEVIRRRQSGTPAESAPRTSGSKLKNWLGGLKSLGKDSSKLGKAFRGMGKAVPYVGSALAVFDLAGINKDNAGEKVGSIGGRIAGAEAGATAGAEAGATIGSFVGPEGTAIGGAIGGIGGGLVGGIGGEEAGKNIGKMFDTSKLKESISNSLFNKEWWSGKWNSISDTANGAITWIEDTWSKVSTWFDQYVFTPIYNVAVPVINFIVGLFAYAWDGILAVWNIVYPWFKDNVWDPISGAVTNVATTIWTGLCNAWTVISGIWSTVSTWFMDNVWNPVSEAVTTAATWIWSKINDAWTIISNIWTGVSNWFYDNVWNPIVKKVEDIKTSIKEKFDDARKFFEDAWDGIETWFNEHVKDPLVKVSEKIAEKFQWLFDLKDSVGGFVAKVIHRGEEVTHLKKKPIKKDSKEKKTSSKPTTNNIFAQSPSNNNMTVFQQALDQNATGGYITKPTISWIGEAGKEFVIPVDNNRGRGKMLLSQAASKLGMQVVDDMGAASSSGGSPASVSGGAAVSPLSGTASPVMNTANLTGQASTLGQQFSEGFGKGISDQPVKMEDWKKKNINTPFTQMISASPNYGKQMVSGYAKGQSGTATGTDGFLQSKVKTPFQATVSKSSSWGTGTVKGFAQGQNSTQTGTAQYVSTHVDKPFLRSKDTSNSWGSGLIGNFVTGMNSKSSEVKQAAKDMAKRVEQAFREELDIHSPSRVMMSLGRFASVGVVKGLDSVDVKKYAEKQAGSLAAAYSGMGAVGGNVKQWLMAAIMATKTPLSWLSGLMTIAQYESGGNPNSINLWDSNAKAGNPSQGLMQTVPTTFNAHKAPGMGNIRNPIHNAAAAIGYIKSRYGSIDNVPGIKSLKRGGPYVGYANGGLITKEQIARVGEGNKREWIIPEERGIRGRYLLQRAAQALGMEVTDPSQSQQSELSSGQVSAVTSASRPTAAVSGSKEIYIQFNGDQHFHNGQDAESLAAKIKQALIDELQKDINIGTKGVVAFD
Atome Classification :
(20 SA)
.........10........20........30........40........50........60........70........80........90--------..--------......100........110.......120-----....---....-----.130.......140.---....--..150.......160--.......170.......180-------.........190.......---200.......210....-...220.......230.......240.......250.......260.......---270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.....-..560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......--810.......820.......830.......840......-.850.......860.......870..-.....880.......890.......900.......910.......920.......930.......940.......950.......960.......970.......980.......990.......1000......1010......1020......1030......1040......1050......1060......1070......1080......1090......1100......1110......1120......1130......1140......1150......1160......1170......1180......1190......1200......1210......1220......1230......1240......1250......1260......1270......1280......1290......1300......1310......1320......1330
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MA
K
L
T
A
R
FD
L
E
D
K
V
S
K
K
L
K
R
I
H
K
G
F
Q
E
V
E
K
K
V
K
TIN
R
Q
I
K
I
S
I
RAE
D
Q
A
F
Y
R
L
R
KIN
D
Y
I
I
L
K
FAKS
L
E
I
K
V
V
LD
D
Q
V
T
S
K
L
D
A
I
E
R
K
L
K
R--------LP--------KET
K
L
T
V
S
-
L
V
D
R
T
A
A
A
Y
K
K
I
K
K
M
LSNQ-------
K
L
S
F
---
L
L
IP-----D
D
K
V
T
S
T
V
K
R
I
I
G
Y
I
---
K
K
NL--KNG
Y
T
V
K
L
K
V
I
D
E
I
T
--
K
T
V
N
R
L
T
A
L
L
R
K
FEK
T
Y
Y
---------
V
K
V
V
V
K
TKISDKI
N
K
K
E
S
L
---INKETSKKESDKSSDKG-SDKNSDQKPG
W
V
G
K
I
K
G
W
L
K
D
W
WTKSAW
P
W
I
K
D
T
L
N
E
I
G
K
A
F
L
D
R
F
K
E
R
L
I
E
K
---
L
K
N
D
V
F
D
K
I
I
D
K
ILGPQKKDDSGENSDT
D
K
K
V
LNRNTGG
N
C
C
C
D
C
C
EGGISPGTKN
K
K
T
Y
RKKKSPTKAPN
R
T
LKV
P
G
E
V
I
R
R
RQSGTPAESAPRTS
G
S
K
L
K
N
W
L
G
G
L
K
S
LGK
D
S
S
K
L
G
K
A
F
R
GMGKAVPYVG
S
A
L
A
V
F
D
LAGINKDNAGE
K
V
GSIGGRIAGAEAGATAGAEAGATIGSFVGPEGTAIG
G
A
I
G
GIG
G
G
L
VGGIG
G
E
E
A
G
K
N
I
G
K
MF
D
T
S
K
L
K
E
S
I
S
N
S
L
FNKEWWSGKWNSISDTAN
G
A
I
T
W
I
E
D
T
W
S
K
V
S
T
W
F
D
Q
Y
V
F
T
P
I
Y
N
V
A
V
P
V
I
N
F
I
V
G
L
F
A
-
Y
A
W
D
G
I
L
A
V
W
N
I
V
Y
P
W
FKDNVWDPI
S
G
A
V
T
N
V
A
T
T
I
W
T
G
L
C
N
A
W
T
V
I
S
G
I
W
S
T
V
S
T
W
F
M
D
NVW
N
P
V
S
E
A
V
T
T
A
A
T
W
I
W
S
KIN
D
A
W
T
I
I
S
N
I
W
T
G
V
S
N
W
F
Y
DN
V
W
N
P
I
V
K
K
V
E
D
I
K
T
S
I
K
E
K
F
D
D
A
R
K
F
F
E
D
A
W
D
G
I
E
T
W
F
N
EHVK
D
P
L
V
K
V
S
E
K
I
A
E
K
F
Q
W
L
F
D
L
K
D
S
V
G
G
F
V
A
K
V
I
HRGE
E
V
T
H
L
K
KKPIKKD
S
K
EKKTSSKPTTNN
I
F
AQSPSNN
N
M
T
V
F
Q
Q
A
L
DQNATGGYITK
P
T
I
S
W
I
G
EAG
K
E
F
V
I
--PVDNNRGR
G
K
M
L
L
S
Q
A
A
S
KL
G
M
Q
V
V
D
DMGAASSSGGSPA-SVSGGAAVSPLSGTASP
V
M
NTANLTG-
Q
A
S
T
L
G
Q
Q
F
S
E
G
FGKGISDQPV
K
M
E
D
W
K
KKNIN
T
P
F
T
Q
M
ISASPN
Y
G
K
Q
M
V
S
G
YAKGQSGTATGT
D
G
F
L
Q
S
K
VKTP
F
Q
ATVSKSSSWGTGT
V
K
GFAQGQNSTQTG
T
A
Q
Y
V
S
T
HVDKPFLRSKDTSNSWGS
G
L
I
G
N
F
V
TGMNS
K
S
S
E
V
K
Q
A
A
K
D
M
A
K
R
V
E
Q
A
F
R
E
ELDIH
S
P
S
R
V
M
M
S
L
G
R
F
A
S
V
G
V
VKG
L
D
S
V
D
V
K
K
Y
A
E
K
QA
G
S
L
A
A
A
Y
SGMGAVG
G
N
V
K
Q
W
L
M
A
A
I
M
ATK
T
P
L
S
W
L
S
G
L
M
T
I
A
Q
YESGGNPN
S
I
N
LWDSNAKAGNPSQ
G
L
M
Q
TVPTTFNAHKAPGMGNIR
N
P
I
H
N
A
A
A
A
I
G
Y
I
K
S
RYGSIDNVP
G
I
K
S
LKRGGP
Y
V
G
YANGGLI
T
K
E
Q
I
A
R
VGEGNKR
E
W
IIPEERGI
R
G
R
Y
L
L
Q
R
A
A
Q
ALGMEVTDPS
Q
S
Q
Q
S
ELSSGQ
V
S
A
V
TSASRP
T
A
AVSGS
K
E
I
Y
I
Q
FNGDQHFHNGQ
D
A
E
S
L
A
A
K
I
K
Q
A
L
I
D
E
L
Q
K
DINIGTK
G
V
V
AFD
46
Fugue
68.85
13%
-87
* C4 *
3W3W
1
IMB3_YEAST
A:
[3-1077]
--------
A
L
P
E
E
V
N
R
T
L
L
Q
I
V
Q
A
F
A
S
D
N
Q
I
R
S
V
A
E
K
A
L
S
E
E
W
I
T
E
N
----
N
I
E
Y
L
L
T
F
L
A
E
Q
A
A
F
S
Q
D
T
T
V
A
A
L
S
A
V
L
F
R
K
L
A
L
K
A
P
I
T
H
--------
I
R
-------------------------
K
E
V
L
A
Q
I
R
S
S
L
-------
L
K
G
F
---
L
S
E
R
-----
A
D
S
I
R
H
K
L
S
D
A
I
A
E
C
---
V
Q
D
---------------------
D
L
P
A
W
P
E
L
L
Q
A
L
I
E
S
L
K
---------
S
G
N
P
N
F
R
E
S
S
F
R
I
L
T
T
V
P
Y
---
L
I
T
A
V
D
I
N
S
I
L
P
I
F
Q
S
G
F
T
D
A
S
D
N
V
K
I
A
A
V
T
A
F
V
G
Y
F
K
Q
L
-
P
K
S
E
W
S
K
----
L
G
I
L
L
P
S
L
L
N
S
L
-
P
R
F
L
D
D
---
G
K
D
D
A
L
A
S
V
F
E
S
L
I
E
L
V
E
L
-------------------------------------------------
A
P
K
L
F
K
D
M
F
D
Q
I
I
Q
F
T
D
M
V
I
K
N
K
D
L
E
---
P
P
A
R
T
T
A
L
E
L
L
T
V
F
S
E
N
A
P
Q
M
C
K
S
N
Q
N
Y
G
Q
T
L
V
M
V
--
T
L
I
M
M
T
E
V
S
I
D
D
D
D
A
A
E
W
I
E
S
-
D
D
T
D
D
E
E
E
V
T
Y
D
H
A
R
Q
A
L
D
R
V
A
L
K
L
G
--------------------------
G
E
Y
L
A
A
P
L
-
F
Q
Y
L
Q
Q
M
I
T
S
T
E
W
R
E
R
F
A
A
--
M
M
A
L
S
S
A
A
E
G
C
A
D
V
L
I
G
E
I
P
K
I
L
D
M
V
I
P
L
I
N
D
P
H
P
R
V
Q
Y
G
C
C
N
V
L
G
Q
I
S
T
D
F
S
P
F
I
Q
R
T
A
H
D
R
I
L
P
A
L
I
S
K
L
T
S
E
C
T
S
R
V
Q
T
H
A
A
A
A
L
V
N
F
S
E
F
A
S
------
K
D
I
L
E
P
Y
L
D
S
L
L
T
N
L
L
V
L
L
Q
S
N
K
L
Y
V
Q
E
Q
A
L
T
T
I
A
F
I
A
E
A
A
K
N
K
F
I
K
Y
Y
D
T
L
M
P
L
L
L
N
V
L
K
-
V
N
S
V
L
K
G
K
C
M
E
C
A
T
L
I
G
F
A
V
G
--
K
E
K
F
H
E
H
-
S
Q
E
L
I
S
I
L
V
A
L
Q
N
S
D
A
L
R
S
Y
L
E
Q
S
W
S
R
I
C
R
I
L
---
G
D
D
F
V
P
L
L
P
I
V
I
P
P
L
L
I
T
A
K
A
T
Q
D
-------------------
V
G
L
I
E
E
E
E
A
A
N
F
Q
Q
Y
P
D
W
D
V
V
Q
V
Q
G
K
H
I
A
I
H
T
S
V
L
D
D
K
V
S
A
M
E
L
L
Q
S
Y
A
T
L
L
R
G
Q
F
A
V
Y
V
K
E
V
M
E
E
I
A
L
P
S
L
D
F
Y
L
H
D
G
V
R
A
A
G
A
T
L
I
P
I
L
L
S
C
L
L
A
A
E
E
L
V
L
L
W
H
K
A
S
S
K
L
I
G
G
L
M
S
E
P
-----------------
M
P
E
I
T
Q
V
Y
H
N
S
L
V
N
G
I
K
V
M
G
D
N
C
-------------------------
L
S
E
D
Q
L
A
A
F
T
K
G
V
S
A
N
L
T
D
T
Y
E
R
M
Q
---
D
R
D
E
Y
N
E
D
F
T
D
E
D
L
L
D
E
I
N
K
S
I
A
A
V
L
K
T
T
N
G
H
Y
L
K
N
L
E
N
I
W
P
M
I
N
T
F
L
L
E
P
I
L
V
I
F
A
L
V
V
I
G
D
L
I
Q
Y
E
Q
T
--------------
A
S
M
K
N
A
F
I
P
K
V
T
E
C
L
I
S
P
D
A
R
I
R
Q
A
A
S
Y
I
I
G
V
C
A
Q
Y
A
P
-----------------------------
S
T
Y
A
D
V
C
I
P
T
L
D
T
L
V
Q
I
V
D
G
S
K
L
E
E
N
R
S
S
T
E
N
A
S
A
A
I
A
K
I
L
Y
A
Y
N
S
--
N
I
P
-----------------------------
D
T
Y
T
A
N
W
F
--------
K
T
L
P
T
I
T
D
K
E
A
A
S
F
N
Y
Q
F
L
S
Q
V
C
A
Q
S
N
I
S
A
V
V
D
S
V
I
Q
A
L
N
E
-----
R
S
L
T
V
I
S
S
V
K
K
L
L
G
F
L
P
S
S
D
A
M
A
I
F
N
R
Y
P
A
D
I
M
E
K
V
H
K
W
F
-----------
9
PsiBlast_PDB
54.88
22%
-99
- C2 -
1JXL
5
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
53.94
22%
-101
- C2 -
1S0O
5
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
53.70
22%
-101
- C2 -
1S10
3
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
PsiBlast_PDB
53.52
22%
-96
- C2 -
2IA6
5
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
53.47
22%
-96
- C2 -
1N56
3
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
53.43
22%
-93
- C2 -
1RYS
4
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
53.43
22%
-96
- C2 -
4QW8
4
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
53.38
22%
-89
- C2 -
4QWD
5
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
14
PsiBlast_PDB
52.89
22%
-91
- C2 -
1S0M
5
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
52.78
22%
-91
- C2 -
4QWA
3
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
PsiBlast_PDB
52.71
22%
-97
- C2 -
1S9F
5
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
52.63
22%
-93
- C2 -
1RYR
3
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
52.62
22%
-88
- C2 -
4QW9
4
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
52.52
22%
-90
- C2 -
4QWE
4
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
52.19
22%
-94
- C2 -
1S97
3
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
51.06
22%
-95
- C2 -
1S0N
6
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
49.51
22%
-85
- C2 -
3V6K
5
DPO4_SULSO
A:
[112-322]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
P
H
G
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
49.32
22%
-95
- C2 -
1N48
3
DPO4_SULSO
A:
[107-317]
-----
A
Y
L
D
I
S
D
K
V
R
D
Y
R
E
A
Y
N
L
G
L
E
I
K
N
K
I
L
E
K
E
K
I
T
V
T
V
G
I
-
S
K
N
K
V
F
A
K
-------
I
A
A
D
M
A
K
P
N
G
I
K
V
I
D
D
E
E
V
K
R
L
I
R
E
L
D
--
I
A
D
--------
V
P
GIG
N
I
T
A
E
K
L
K
K
L
G
I
N
K
L
V
D
T
L
S
I
E
F
D
K
L
K
G
M
I
G
E
A
-------
K
A
K
Y
---
L
I
S
L
A
R
DE
Y
N
E
P
I
R
T
R
V
R
K
S
I
G
R
I
V
T
M
K
R
N
S
--
R
N
--------
L
E
E
I
K
--
P
Y
------
L
F
R
A
I
E
E
S
Y
Y
K
L
DKRIPK
A
I
H
V
V
A
V
T
E
D
L
D
I
V
S
R
G
R
T
F
PHG
I
S
K
E
T
A
Y
S
E
S
V
K
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
47
Fugue
46.69
14%
-83
- C3 -
3ETV
-
DSL1_YEAST (first)
A:
[9-350]
------------
N
I
N
D
R
I
K
Q
V
Q
N
E
R
N
E
L
A
S
K
L
Q
N
L
K
L
Q
R
E
A
I
L
A
N
E
L
N
I
L
D
N
L
K
T
F
L
N
-
L
I
K
E
V
K
T
N
L
N
I
L
E
L
--
E
N
C
Y
Y
S
L
Q
S
L
R
K
K
M
R
N
N
A
A
Y
L
K
QS
F
N
--------
F
Q
Q
S
I
S
T
Y
-
V
D
T
L
H
L
E
L
V
S
T
L
Y
K
I
L
T
N
G
F
W
K
I
T
EN
S
I
Q
F
T
PT
V
E
W
G
-----
K
D
K
V
H
I
E
Y
D
T
F
M
D
F
V
---
A
Q
Q
Y
FP
K
G
S
L
D
N
Q
A
W
F
I
L
D
M
T
S
A
D
S
Q
E
Q
V
R
A
K
L
N
T
I
M
K
E
Y
M
---------
N
L
S
R
I
V
S
M
I
K
N
S
I
F
I
S
G
K
E
---
I
S
Y
E
N
E
K
N
I
L
V
F
S
K
S
C
V
-
S
T
V
L
T
S
F
E
A
-
V
C
D
F
M
L
D
G
L
A
F
R
D
R
K
T
L
S
Y
E
L
G
P
L
F
N
T
E
F
T
K
F
V
K
N
N
A
S
I
I
L
E
S
LDS
P
L
K
N
L
V
S
V
I
N
N
K
L
T
R
L
V
A
K
S
E
V
T
N
W
T
H
S
G
K
E
I
Q
D
L
L
M
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------