@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : bsu13370: (2016-06-20 )
MFTILLSLAILVFVPFLYKANRNTKDVKVNTISIDQKDGLPARKKLNILHLSDLHLENISVSPEELYHLTKDQPVDIIALTGDFLDRKRNIPKLAGYLNALQKLKPAYGMYAVFGNHDYVLKEEDFQRLKRVLEENGCITLQNEHVRIETAAGPVNIIGIDDYSTNRSNITGSYQSLENGYHLVLTHDPNIILDMKDVHYDYLLSGHFHGGQIHWPKPYHLVKMGKLVRMNMIKGLHYHHDKPFYISEGLGQTGVNIRVGSRPEVTFHQI

Atome Classification :

(20 SA) .........10........20........30........40........50.....--------------.----------..----------60--------------------------------.........70.--.--......80.....--...-90---.-.--------.-.-....-.100.------------.---------------------------------.----------------.-.-..110..--....---------.120...-------.----...130....------..-.-140..---------.-------....-.--150--.---------........160----------...-----------------------.---------------.----------------.--------------.170---.---....-----.--..180----......------------------..190.----------------.------------------.---...--.--200.......210.......220......-.230..----.....240.......250.-......260.......270------------------------------------------------------------------------------------------------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MFTILLSLAILVFVPFLYKANRNTKDVKVNTISIDQKDGLPARKKLNILHLSDLHL--------------E----------NI----------S---------------------------------VSPEELYHLTKD--Q--PVDIIALTGDFLD--RKR-N----I-P--------K-L-AGYL-NALQK------------L---------------------------------K----------------P-A-YGMYAVF--GNHD---------YVLKEED-------F----QRLKRVLEEN------GC-I-TL-QN---------E-------HVRI-E--T----A---------AGPVNIIGIDD----------YST-----------------------N---------------R----------------S--------------NIT----G---SYQS-----L--ENGY-----HLVLTH------------------DPNIIL----------------D------------------M---KDV--H--YDYLLSGHFHGGQIHWPKPYHLVKMGKLV-RMNMIK----GLHYHHDKPFYISEGLGQT-GVNIRVGSRPEVTFHQI--------------------------------------------------------------------------------------------------------------------
27 HHSearch 78.8824%-131 - C3 -4NZV ? A:[16-236] ------------------------------------------LKELKILHTSDWHL--------------G----------VT----------SWTSSRPVDRREELK-------------------KALDKVVEEAEK--R--EVDLILLTGDLLH--SRN-NP---SVV--------A-L-HDLL-DYLKR------------M---------------------------------M----------------R-T-APVVVLP--GNHD---------WKGLKL--------F----GNFVTSI-SS------DI-T-FVMSF---------E-------PVDV-E--AK---R---------GQKVRILPFPY----------PDE-----------------------S---------------E----------------ALRKNEGDFRFFLESRLN----K---LYEEA----LK-KEDF-----AIFMGH------------------FTVEGLAGYAGIEQGREIIINRA------------------L---IPS--V--VDYAALGHIHSFREIQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40 HHSearch 78.8319%-123 - C3 -5FC1 ASM3A_MOUSE A:[16-286] --------------------------------------ADRAPAVGQFWHVTDLHL--------------D----------PT----------YHITDDRTKVCASSKGANASNPGPFGDVLCDSPYQLILSAFDFIKNSGQ--EASFMIWTGDSPP--HVP-V----P-ELSTGTVIKV-I-TNMT-MTVQN------------L---------------------------------F----------------P-N-LQVFPAL--GNHD---------YWPQDQLPIVTSKVYSAVADLWKPWLGEE------AI-S-TLKKG---------G-------FYSQ-K--VA---S---------NPGLRIISLNT----------NLY-----------------------YGPNIMTLNKTDPANQF----------------E--------------WLE----N---TLNS-----SLWNKEK-----VYIIAH------------------VPVGYLPYATDTPAIRQYYNE-KLLDI--------------F---RRY--SSVIAGQFYGHTHRDSLMV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
48 Fugue 76.6116%-120 - C3 -3IB7 CPDA_MYCTU A:[16-310] -----------------------------------LRAAEHPRPDYVLLHISDTHL--------------IGGDRRLYGAVDA----------D---------------------------------DRLGELLEQLNQSGL--RPDAIVFTGDLAD---KG-E----P-A--------A-Y-RKLR-GLVEP------------F---------------------------------A----------------A-Q-LGAELVWVMGNHD---------------D-------R----AELRKFLLDE-----------AP-SM---------A-------PLDR-V--C----M---------IDGLRIIVLDTSVPGHHHGEIRAS-----------------------Q---------------L----------------G--------------WLA----E---ELAT-----P--APDG-----TILALHHPPIPSVLDMAVTVELRDQAALGR----------------V------------------L---RGT--D--VRAILAGHLHYSTNATFVGIPVSVASATC-YTQDLTVAAGGTRGRDGAQGCNLVHVYPD-TVVHSVIPLGGGETVGTFVSPGQARRKIAESGIFIEPSRRD--------------------------------------------------------------------------------------------
26 HHSearch 75.4418%-134 - C3 -4LTY ? C:[12-250] ------------------------------------------IEFMRILHTSDWHL--------------G----------QN----------FYSKSREAEHQ-----------------------AFLDWLLETAQT--H--QVDAIIVAGDVFD--TGS-P----P-S--------YAR-TLYN-RFVVN------------L---------------------------------Q----------------QTG-CHLVVLA--GNHD---------SVATLN--------------ESRDIMAFL------NT-T-VV-AS---------AGHA----PQIL-PRRD----G---------TPGAVLCPIPF----------LRP-----------------------R---------------DIITSQEKQQHLLAAITD--------------YYQ----Q---HYADACKLRGD-QPLP-----IIATGH------------------LTTVGA----------------SKSDAVRDIYIGTLDA---FPAQNFP--P--ADYIALGHIHRAQII----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37 HHSearch 74.4720%-139 - C3 -1II7 MRE11_PYRFU A:[1-213] ---------------------------------------------MKFAHLADIHL--------------G----------YE----------QFHKPQREEEFA----------------------EAFKNALEIAVQ--E--NVDFILIAGDLFH--SSR-P----SPG--------T-L-KKAI-ALLQI------------P---------------------------------K----------------EHS-IPVFAIE--GNHD---------RTQRG--------------PSVLNLLEDF------GLVY-VI-GM---------RKEKVENEYLTSER--L----GNGEYLVKGVYKDLEIHGMKY----------MS----------------------------------------S----------------A--------------WFE----ANKEILKR-----LFRPTDN-----AILMLH------------------QGVREV----------------SEARGEDYFEIG-------LGD-LPE--G--YLYYALGHIHKRYET----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 HHSearch 73.1222%-136 - C3 -3THO RAD50_THEMA B:[1-218] ---------------------------------------------MKILHTSDWHL--------------G----------VT----------SWTSSRPVDRREELK-------------------KALDKVVEEAEK--R--EVDLILLTGDLLH--SRNNP----SVV--------A-L-HDLL-DYLKR------------M---------------------------------M----------------R-T-APVVVLP--GNQD---------WKGLKL--------F----GNFVTSI-SS------DI-T-FVMSF---------E-------PVDV-E--AK---R---------GQKVRILPFPY----------PDE-----------------------S---------------------------------KNEGDFRFFLES--RLN----K---LYEEA----LK-KEDF-----AIFMGH------------------FTVEGL----------------AGREIIINRA---------L---IPS--V--VDYAALGHIHSFREIQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 HHSearch 72.2619%-130 - C3 -3IB7 CPDA_MYCTU A:[21-227] ----------------------------------------HPRPDYVLLHISDTHL--------------I----------GGDRRLYGAVDAD---------------------------------DRLGELLEQLNQSGL--RPDAIVFTGDLAD--KGE-P----A----------A-Y-RKLR-GLVEP------------F---------------------------------AAQ--------------L-G-AELVWVM--GNHD---------DRAEL-----------------RKFLLDE------AP---SM-AP---------L-------DRVC---------M---------IDGLRIIVLDT----------SVP-----------------------GHHHGEIRASQ-----L----------------G--------------WLA----E---ELAT-----P--APDG-----TILALH------------------HPPIPS----------------VLDMAVTVELRDQAALGRVL---RGT--D--VRAILAGHLHYSTNAT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31 HHSearch 71.7320%-124 - C3 -3T1I MRE11_HUMAN A:[28-273] ----------------------------------------DDENTFKILVATDIHL--------------G----------FM----------EKDAVRGNDTF-----------------------VTLDEILRLAQE--N--EVDFILLGGDLFH--ENK-P----SRK--------T-L-HTCL-ELLRK------------Y---------------------------------CMGDRPVQFEILSDQLNI-S-IPVFSIH--GNHD---------DPTGAD--------A----LCALDILSCA------GF-VNHF-GRSMSVEKIDIS-------PVLL-Q--K----G---------STKIALYGLGS----------IPD-----------------------E---------------R----------------LYRMFVNKKVT----MLR----P---KED------E--NSWF-----NLFVIH------------------QNRSKHGSTNFIPE--------Q------------------F---LDD--F--IDLVIWGHEHECKIAP---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38 HHSearch 70.4621%-123 - C3 -4FBW RAD32_SCHPO A:[10-253] -----------------------------------------NENTIRILISSDPHV--------------G----------YG----------EKDPVRGNDSF-----------------------VSFNEILEIARE--R--DVDMILLGGDIFH--DNK-P----SRK--------A-L-YQAL-RSLRLNCLGDKPCELELLSNINYLDPNI-----------------------N----------------V-A-IPVFSIH--GNHD---------D-------------R----YSALDILQVT------GL-VNYF-GRVP--------NIVVS--PILL-Q--K----G---------FTKLALYGISN----------VRD-----------------------E---------------R----------------LYH------------SFRENKVK---FLRPDL---YR-DEWF-----NLLTVH------------------QNHSAH----------------TPTSYLPES----------F---IQD--F--YDFVLWGHEHECLID----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44 Fugue 70.2519%-113 - C3 -2HY1 CPDA_MYCTU A:[12-267] -----------------------------------------PRPDYVLLHISDTHL--------------I----------DA----------D---------------------------------DRLGELLEQLNQ--SGLRPDAIVFTGDLADKGEPA-A----Y-R--------K-L-RGLV-EPFAA------------Q---------------------------------L----------------G-A--ELVWVM--GNHD---------------D-------R----AELRKFLLDE-----------AP-SM---------A-------PLDR-V--C----M---------IDGLRIIVLDT----------SVP-----------------------G---------------H----------------H--------------HGE----I---RASQ-----L--GWLA-----EELATP------------------APDGTI----------------L------------------A-----L--H--HPPIPSVLDMAVTVELRDQAALGRVLRGT-DVRAIL----AGHLH--YSTNATFVGIPV-SVASATCGCNLVHVYPDTVVHSVIP------------------------------------------------------------------------------------------------------------
43 Fugue 68.9120%-134 - C3 -1II7 MRE11_PYRFU A:[1-333] ---------------------------------------------MKFAHLADIHLGYEQFHKPQRE---E----------EF----------A---------------------------------EAFKNALEIAVQ--E--NVDFILIAGDLFH--SSRPS----P-G--------T-L-KKAI-ALLQI------------P---------------------------------K----------------E-HSIPVFAIE--GNHDRTQRGPSVLNLLEDFG-------L----VYVIGMRKEKVENEYLTS-E-RL-GN---------G-------EYLV-K--G----V---------YKDLEIHGMKY----------MSS-----------------------A---------------W----------------FE-------------ANK----E---ILKR-----LFRPTDN-----AILMLHQGVREVSEARG-------EDYFEI----------------G------------------L---GDLPEG--YLYYALGHIHKRYETSYSGSPVVYPGSLE-RWDFGD----YEVRYEWDGIKFKERYGVNKGFYIVEDFKPRFVEIKVRPFIDVKIKGSEEEIRKAIKRLIPLIPKNAYVRLNIGWRKPFDLTEIKELLNVEYLKIDTWRI-----------------------------------------------------
29 HHSearch 64.3715%-122 - C3 -1UTE PPA5_PIG A:[3-229] -----------------------------------------PTPILRFVAVGDWGG--------------V----------PN----------APFHTAREM-------------------------ANAKAIATTVKT--L--GADFILSLGDNFY--FTG-VHDAKD-K--------R-FQETFE-DVFSD------------P---------------------------------SL---------------R-N-VPWHVLA--GNHD---------HLGNVSA-------Q----IAYSKISKRW------N-----F-PS---------P-------YYRL-R--FKIPRS---------NVSVAIFMLDT----------VTLCGNSDDFVSQQPERPRNLALARTQ---------------L----------------A--------------WIK----K---QLAA-----A--KEDY-----VLVAGH------------------YPVWSI----------------AEHGPTHCLVKQLLPL---L---TTH--K--VTAYLCGHDHNLQYLQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
30 HHSearch 64.3217%-129 - C3 -3D03 ? A:[1-203] ---------------------------------------------MLLAHISDTHF--------------R----------SR----------GEKLYGFIDVN-----------------------AANADVVSQLNA--LRERPDAVVVSGDIVN--CGR-P----E----------E-Y-QVAR-QILGS------------L----------------------------------------------------N-YPLYLIP--GNHD---------DKALFL-------------EYLQPLCPQL------GS------DA---------N-------NMRC-A--V----D---------DFATRLLFIDS----------SRA-----------------------GTSKGWLTDET-----I----------------S--------------WLE----A---QLFE-----G--GDKP-----ATIFMH------------------HPPLPL----------------GNAQMDPIACENGHRLLALV---ERFP-S--LTRIFCGHNHSLTMTQ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5 PsiBlast_PDB 63.5128%-197 - C3 -4O24 ? A:[16-107] -------------------------------------------KELKILHTSDWHLGVTSWTSSRPVDRRE----------EL----------K---------------------------------KALDKVVEEAEK--R--EVDLILLTGDLLH--SRN-NPS--V-V--------A-L-HDLL-DYLKR------------M---------------------------------M----------------R-T-APVVVLP--GNHD---------W-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36 HHSearch 63.2917%-101 - C3 -4YKE ? A:[5-250] ----------------------------------------AGPDTIRILVSTDNHV--------------G----------YE----------ERDPIRKDDSW-----------------------RTFDEIMQLART--K--DVDMVLLGGDLFH--DNK-P----SRK--------A-M-YQVM-RSLRK------------NCLGMKPCELEFLSDPAEVFEGAFPHVNYYDPDIN----------------V-S-IPVFSIH--GNHD---------DPSGDG--------H----LCSLDLLQVA------GL-VNYF-GRVPEA-----DNIHVK--PILL-Q--K----G---------KTKLALYGMSN----------VRD-----------------------E---------------R----------------IHR------------TFRDNKVR---FYRP------T-GDWF-----NLLTLH------------------QNHYAHTPTGYLSE--------N------------------M---LPD--F--LDLVIWGHEHECLID----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 62.9828%-197 - C3 -4O5G ? A:[17-108] -------------------------------------------KELKILHTSDWHLGVTSWTSSRPVDRRE----------EL----------K---------------------------------KALDKVVEEAEK--R--EVDLILLTGDLLH--SRN-NPS--V-V--------A-L-HDLL-DYLKR------------M---------------------------------M----------------R-T-APVVVLP--GNHD---------W-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 62.8428%-184 - C3 -4O43 ? A:[17-108] -------------------------------------------KELKILHTSDWHLGVTSWTSSRPVDRRE----------EL----------K---------------------------------KALDKVVEEAEK--R--EVDLILLTGDLLH--SRN-NPS--V-V--------A-L-HDLL-DYLKR------------M---------------------------------M----------------R-T-APVVVLP--GNHD---------W-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3 PsiBlast_PDB 62.4028%-191 - C3 -4O4K ? A:[17-108] -------------------------------------------KELKILHTSDWHLGVTSWTSSRPVDRRE----------EL----------K---------------------------------KALDKVVEEAEK--R--EVDLILLTGDLLH--SRN-NPS--V-V--------A-L-HDLL-DYLKR------------M---------------------------------M----------------R-T-APVVVLP--GNHD---------W-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 60.4428%-181 - C3 -4NZV ? A:[17-108] -------------------------------------------KELKILHTSDWHLGVTSWTSSRPVDRRE----------EL----------K---------------------------------KALDKVVEEAEK--R--EVDLILLTGDLLH--SRN-NPS--V-V--------A-L-HDLL-DYLKR------------M---------------------------------M----------------R-T-APVVVLP--GNHD---------W-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
51 Fugue 59.8016%-126 - C3 -3AV0 MRE11_METJA A:[18-386] ------------------------------------------GSHMMFVHIADNHLGYRQYNLDDRE---K----------DI----------Y---------------------------------DSFKLCIKKILE--I--KPDVVLHSGDLFN--DLR-P----P-V--------K-A-LRIAMQAFKK------------L---------------------------------H----------------E-NNIKVYIVA--GNHE---------MPRRLGE-------E----SPLALLKDY----------V-KI-LD---------G-------KDVI-N--V----N---------GEEIFICGTYY----------HKK-----------------------SK--------------R----------------E--------------EML----D---KLKN-----F--ESEAKNYKKKILMLHQGINPYIP----------LDYELE----------------H------------------F---DLP--K--FSYYALGHIHKRILERFNDGILAYSGSTEIIYRNEY----EDYKKEGKGFYLVDFSGND-LDISDIEKIDIECREFVEVNIKDKKSFNEAVNKIERCKNKPVVFGKIKREFKPWFDTLKDKILINKAIIVDDEFIDMPDNVDIESLNIKELLVDYANRQGIDGDLVLSLYKALLNNENWKELLDEYYNTKFRG