@TOME V2.3
(Nov 2016)
Ref.
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu17800: (2016-06-28 )
MKRNGIVSALCFIGFLAAEAPDISVAEALVLLSILFFVPGIFPFVFRQSPVRAAQFMENGLIQCYPVAAFFAVLALVTEVGGFALIWWMYTVFNALYAILRLWETKIHRIEETSVLFGLIYLAGGGFWFFAYAAHLQIMQFGPLIILLTAVHFHYSAFLIPIFNGLLGRTIRKHRMLYSWITWVILLSPLLIALGITYSKTLDVIAVSIYMAAIYLHAFLVFTAAFRTKTGTFLIRLSSAVLMITIAFSMIYSFGVFRQEVTLTINQMIWIHGFVNAFGVILPALIGWRIEDAKPFDADSVKTFSRIYGKRKIGEEFLANIQAENNARYSGLVDDMGSLRSKDFSPEKLAPLILSFYEQTIEYNIKAKVTWSTWFRPLAIIYEWFSRRIGQIHLSTNPDWYRMYSKIKGVHSKKDGRERVRAWIRTNEKNETIFTALYSVYRSNGEGYMNISLPLPFSSMTGILKPYHHQEKLVLTSRRRKSRAGDEGIYLQTRAGTCPLPLSETFLIEAVHDNKLTAVHHMWLFGIKFLTVHYSITHINQPIERT
Atome Classification :
(20 SA)
----------------------------------------.....-....10....------....-20---...--......30..-----------.------------.....40---........50-------.........60........70----........80.----------....------...90-----..------------.......100----------------........110.---...--..-.120..---...-----..130.......-------------------------------------140--...-----....150....-----------------.--..160.--.-.....170..--------......180.-----......---------190.......200...----------.---...210....-...220.....---------...230..--.....240.-.---..------------------------..----------------.250.....-..260--.........270.---......280--------.......290-----........--------300.......-----------310-.........320-----.....----.----..330....-----..-------------.340---.....----...350......--------.360.---...--....-370.......------380-------.....--..390..--....-------.400.------------.....------..410.......420...--....-----430.-.--...--..440.......450..------.....460.......-470.....--..480.---....--------------..490.......500........510----........520....-..--.530.-......540....-----------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
----------------------------------------MKRN
G
-
I
V
S
A
L
C
F
I
G
F
------
L
AAE-A----P
D
I
--
S
V
A
E
A
L
V
L
L
S
-----------
I
------------
L
F
F
VP
G
I
---
F
P
F
V
FRQSP--------
V
R
A
A
Q
F
M
ENGL
I
Q
C
Y
P
V
A
A
F
F
----
A
V
L
A
L
V
T
EVG
G
----------
F
A
L
I
------
W
W
M
Y
------
T
V
------------
F
N
A
L
Y
A
I
L
R
-----------------
L
W
E
T
K
I
H
R
IE
E
T
---
S
V
L
--
F
G
-
L
I
Y
LAG---G
G
F
-----
W
F
F
A
Y
A
A
H
L
Q
I
M
-------------------------------------QFG--PL
I
-----
I
L
L
T
A
V
H
F
H
Y
S
-----------------
A
--
F
L
I
P
I
F
--
N
-
G
L
L
G
R
T
-
I
R
K
--------
H
R
M
L
Y
S
W
I
T
W
-----
V
I
L
L
S
P
---------
L
L
I
A
LGITYSK
T
L
D
V
I
----------
A
---
V
S
I
Y
M
A
A
I
Y
L
-
H
A
F
L
-
V
F
T
A
A
F---------RTKT
G
T
F
L
--
I
R
LSS
A
V
L
M
-
I
---
T
I
------------------------
A
F
----------------
S
M
I
Y
S
F
G
V
F
-
R
Q
E
----
V
T
L
T
I
N
Q
M
I
W
I
H
G
---
F
V
N
A
F
G
V
I
L
--------
P
A
L
IGWRIE------DAKPF
D
A
D
--------
S
V
K
T
F
S
R
I
YG-----------K---RKI
G
E
E
F
L
A
N
I
------QAENN----A----RYS
G
L
V
D
D
M
-----
G
S
-------------
L
RS----KDF
S
P
----
E
K
L
A
P
L
I
L
S
F
Y
E
--------
Q
T
I
-
E
---
Y
N
I
--
K
A
K
V
-
T
W
S
T
W
F
R
P
L
A
------
I
I
Y
-------
E
W
F
S
R--RI
G
Q
I
H
L--STN
P
-------
D
W
-
Y
R
------------
M
Y
S
K
I
------KGVHSKKD
G
R
E
R
V
R
A
W
I
R--TNEK-----N
E
T
I
-
F
--
T
A
L
--
Y
S
V
Y
RSNGE
G
Y
M
N
I
S
LP------L
P
F
S
S
M
T
G
I
LKPYHH-
Q
E
K
L
V
L
T
S
--
R
RRKSR---AGDE--------------
G
I
Y
L
QTRAGTCPLP-LS
E
T
F
L
I
E
A
V-----HDNK
L
T
A
V
H
H
M
W
L
F
G
-
I
K
--
F
L
T
V
H
-
Y
S
I
T
HINQPIERT-----------------
38
Fugue
65.13
19%
-38
- C1 -
5C2V
10
?
A:
[1-781]
--------------------------------------EP
V
M
T
G
G
-
P
V
Q
G
K
A
L
W
T
D
------
Y
S
G
M
-
S
----
K
E
V
QG
P
V
S
Q
I
L
F
T
Q
S
P
RTAKGDPYQN
Y
------------
P
H
Y
I
P
E
G
---
S
R
I
V
L
F
D
L
N
--------
T
K
E
L
K
V
L
T
N
D
F
A
T
A
F
D
P
C
T
Y
W
DGK
K
F
A
F
A
G
V
H
K
K
G
G
----------
G
C
Q
I
------
W
E
M
N
IDGSGL
R
Q
------------
M
T
D
L
K
G
T
C
R
S
P
I
Y
Y
A
A
GSIE
E
G
E
G
R
I
I
W
R
D
R
E
G
D
W
K
E
H
---
G
M
V
EK
T
G
-
M
I
I
F
S
G
---
S
P
E
GVMDE
F
H
N
P
Y
A
Y
N
L
Y
R
L
D
TQGG
K
I
I
Q
R
I
TGHVLSGIEFPHLN
T
T
I
D
Q
ITYNLSS
N
F
D
--
P
W
L
T
PD
G
N
I
L
F
S
S
V
Q
A
N
G
S
RAGG
E
G
R
V
M
I
C
V
D
N
WDG
A
--
Y
P
R
P
I
Y
--
G
-
N
C
D
G
E
I
-
G
G
T
--------
S
G
R
S
Q
A
K
I
T
F
GDRKI
V
Y
V
E
S
P
YMNWG
V
G
Q
L
A
A
V
S
W
D
A
P
F
N
K
T
Y
E
K
L
----------
T
GKD
G
G
L
Y
R
S
P
Y
P
L
P
D
D
R
M
-
L
V
S
Y
A
E
---------
R
G
D
F
G
I
Y
W
--
F
N
F
S
K
C
A
A
G
-
D
---
K
V
YDDPNWNDHQ
P
A
P
V
Y
V
K
Y
K
P
R
W
I
N
T
F
----------------
T
A
G
K
N
F
G
V
---
T
V
----
V
T
Y
Q
P
F
D
Q
V
K
V
E
G
---
Y
P
H
S
W
G
T
W
I
C
FDTTLSD
Q
P
V
G
P
Y
P
H
Q
------
K
A
K
N
V
S
H
G
--------
D
I
K
A
V
R
I
I
Q
G
Y
Q
CVEPDSTRF
R
---
V
G
A
G
A
H
L
L
G
G
E
------
R
S
S
S
N
----
S
GTAF
Q
Q
R
G
I
I
G
Y
Q
Y
V
E
SD
G
S
-------------
T
V
T
----
S
Q
L
S
D
-----------
V
P
Y
Y
M
--------
Q
I
L
-
D
DKG
M
S
V
--
Q
T
A
L
-
T
W
A
-
Y
L
R
P
Y
H
------
G
R
I
C
SGCHYG
S
Y
R
G
R
--
A
F
K
N
I
H
A
--
K
A
L
Y
-------
N
W
-
W
Y
DDRSHYDSPFAF
R
Y
L
K
F
D
NDGNY
K
G
V
K
H
G
E
D
V
V
G
T
T
S
Q
P
V
E
GL
T
L
D
K
-----
Q
R
T
V
-
D
FR
R
D
I
--
Q
P
I
L
D
A
K
C
A
M
C
H
D
S
N
N
P
PNLGGG
L
E
L
V
S
V
D
G
I
A
A
Y
S
R
A
-
Y
N
S
L
L
E
P
Q
--
R
G
K
D
P
N
---
I
G
G
K
YVNPSAAINS
L
L
V
W
R
L
Y
E
A
E
L
S
A
N
A
P
R
E
-
K
I
F
P
I
E
G
R
L
L
-----
H
N
K
F
L
T
Q
D
E
R
Y
A
I
---
V
E
--
W
I
D
L
G
-
A
Q
W
D
N
I
P
G
P
D
F
Y
P
GYLV-------------
33
Fugue
60.83
14%
-51
- C4 -
4M59
3
?
A:
[6-714]
PD
A
Q
V
L
V
L
A
I
S
S
HPLPT
L
A
A
F
L
A
S
R
R
D
E
L
L
R
AD
I
T
S
L
L
K
A
L
E
L
S
G
H
W
E
W
A
L
A
L
L
R
W
------
A
G
K
E
G
A
----
A
D
A
--
S
A
L
E
M
V
V
R
A
L
-----------
G
------------
R
E
G
Q
H
D
A
---
V
C
A
L
L
D
E
T
P
LPPG
S
R
L
D
V
R
A
Y
T
T
V
L
H
A
L
S
R
A
G
R
Y
E
R
A
L
----
E
L
F
A
E
L
R
R
Q
G
V
A
P
T
L
V
T
Y
N
V
V
L
D
V
Y
------
G
R
M
G
------
R
S
------------
W
P
R
I
V
A
L
L
D
-----------------
E
M
R
A
A
G
V
E
P
D
G
F
---
T
A
S
--
T
V
-
I
A
A
C
S
R
---
D
G
L
-----
V
D
E
A
V
A
F
F
E
D
L
K
-------------------------------------
A
R
G
HA
P
S
V
-----
V
T
Y
N
A
L
L
Q
V
F
G
KAGN
Y
------------
T
--
E
A
L
R
V
L
--
G
-
E
M
E
Q
N
G
-
C
Q
P
--------
D
A
V
T
Y
N
E
L
A
G
-----
T
E
E
A
A
R
---------
C
L
D
T
M
A
S
P
N
A
F
T
Y
N
T
V
----------
M
---
T
A
Y
G
N
V
G
K
V
D
-
E
A
L
A
-
L
F
D
Q
M
K
---------
K
T
G
F
V
P
N
V
--
N
T
Y
N
L
V
L
G
M
-
L
G
K
K
S
R
------------------------
F
T
----------------
V
M
L
E
M
L
G
E
M
-
S
R
S
G
C
T
P
N
R
V
T
W
N
T
M
L
A
V
S
G
---
K
R
G
M
E
D
Y
V
T
--------
R
V
L
E
G
M
R
S
S
------
G
-
V
E
L
S
R
D
--------
T
Y
N
T
L
I
A
A
Y
G
-----------
R
C
GS
R
T
N
A
F
K
M
Y
N
E
M
------
T
S
A
G
F
T
P
C
I
T
----
T
Y
N
A
L
L
N
V
L
-----
S
R
Q
GD
W
S
T
A
Q
S
I
V
S
K
M
R
T
----
K
G
F
K
P
N
---
E
Q
S
Y
S
L
L
L
Q
C
Y
A
K
G
GN
V
A
G
I
A
A
I
-
E
---
N
E
V
Y
G
S
G
A
V
-
F
P
S
W
V
I
L
R
T
L
------
V
I
A
-------
N
F
K
C
R
--
R
L
D
G
M
E
T
--
A
F
Q
E
V
K
A
RG
Y
N
P
D
-
L
V
------------
I
F
N
S
M
------
L
S
I
Y
A
K
N
G
M
Y
S
K
A
T
E
V
F
D
--
S
I
K
R
S
G
L
S
P
D
L
I
T
-
Y
--
N
S
L
--
M
D
M
Y
A
K
C
S
E
S
W
E
A
E
K
I
L
------
N
Q
L
K
C
-
S
Q
T
M
K
P
D
V
V
-
S
Y
N
T
V
I
N
G
F
C
K
Q
G
L
V
K
---
E
A
Q
R
--------------
V
L
S
E
M
V
A
D
G
M
A
P
C
A
-
V
T
Y
H
T
L
V
G
G
Y
S
S
LEM
F
S
E
A
R
E
V
I
G
Y
M
V
Q
H
G
-
L
K
PM
E
L
T
Y
R
-
R
V
V
E
S
Y
C
R
A
F
E
E
A
R
G
F
L
S
EVKAL
E
A
Y
I
E
D
A
31
Fugue
58.51
18%
-39
- C4 -
4O5P
-
?
A:
[3-813]
---NFGFHIAPTHPVAGRLTYD
S
K
K
L
S
E
N
I
L
K
Q
Q
S
D
E
R
V
F
S
R
A
Q
C
-
C
K
A
I
H
I
T
L
G
F
D
G
TNNN
D
K
A
D
-
G
SSVS
P
S
C
--
S
N
V
A
R
L
I
H
A
S
-----------
I
GSG
D
D
I
N
S
R
G
I
F
K
Y
Y
C
P
G
V
GTV
F
P
D
I
K
E
F
T
P
SNMGLIG
A
E
G
G
E
N
R
I
N
W
G
L
V
Q
L
V
D
A
L
F
Y
T
----
L
L
K
S
R
L
K
L
N
D
V
----------
Q
G
L
V
E
E
M
STN
W
T
V
S
------
T
L
T
G
G
L
L
E
N
G
E
K
K
R
R
A
A
L
E
P
K
L
K
-----------------
E
L
E
E
K
L
R
Q
R
Q
N
S
GQK
P
H
I
--
L
A
M
R
L
Y
I
Y
G
F
S
R
G
A
A
-----
E
A
R
A
F
A
N
W
L
Q
E
L
T
RVSDADG
R
V
E
Y
-------------------------
R
F
A
G
L
P
I
S
-----
I
E
F
L
G
L
F
D
T
V
A
-----------------
A
--
V
G
L
P
F
A
A
G
H
M
D
W
A
D
D
T
M
R
L
P
--------
D
E
A
L
P
E
D
C
S
F
-----
L
K
R
C
V
H
---------
L
V
S
C
H
E
Q
R
A
S
F
P
L
D
S
I
RRRDMNGRRT
G
---
P
S
C
Y
R
K
W
T
V
E
-
Y
A
Y
P
G
V
H
S
D
V
G
GGYGVGNQG
K
A
V
G
G
S
E
F
--
L
L
S
Q
I
A
L
Q
H
M
Y
---
A
E
------------------------
A
F
E
A
GAPLQVPEWRVMV
P
K
I
E
A
E
F
S
V
S
--
E
E
----
L
A
T
R
F
N
A
W
Q
A
Q
A
K
A
G
P
L
E
E
V
I
R
R
E
T
--------
A
L
I
T
A
W
R
I
D
R
YAGGL
R
N
K
A
F
F
A
N
VPPDMP
E
A
Q
Q
K
A
W
E
A
L
H
K
-----------
R
---
R
S
R
E
Y
A
A
A
Q
Q
L
PPMS
A
A
E
Q
A
E
W
----
D
----
R
N
V
A
L
I
G
G
E
-----
D
Q
-------------
L
R
D
LRVE
K
Q
F
D
P
PL
D
Q
R
Q
L
L
G
A
A
A
E
F
A
H
--------
D
Y
K
G
D
---
W
G
V
--
L
D
D
G
M
T
V
G
G
V
I
D
L
L
L
G
G
T
V
F
L
I
N
E
-------
E
D
E
A
E
--
E
Y
S
Q
I
H
R
--
D
G
S
A
-------
R
Y
-
H
Q
------------
L
F
S
A
P
------
D
R
V
---
A
P
G
Q
E
K
L
V
A
L
F
D
--
E
Q
V
H
-----
D
S
R
A
P
F
--
T
D
Y
FR
Y
R
L
V
H
F
D
N
E
S
N
K
R
L
S
V
L
------
A
T
A
G
R
V
V
G
V
----
G
V
M
L
A
S
V
G
L
S
V
--
K
R
R
D
P
R
MLL
G
G
L
P
--------------
E
I
S
A
F
D
P
L
T
G
I
A
L
P
M
V
G
G
A
A
L
D
N
L
R
AFTRE
P
G
D
K
V
E
Q
I
G
Q
L
P
P
P
P
P
L
A
--
V
A
A
V
Q
S
P
A
L
Q
Q
V
L
L
A
Q
Q
T
V
-----------------
10
PsiBlast_PDB
42.20
25%
-137
- C5 -
3C7K
1
GNAO_MOUSE
A:
[92-152]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
M
E
------
D
T
E
P
F
S
A
E
--------
L
L
S
A
M
M
R
L
W
G
-----------
D
---
S
G
I
Q
E
C
F
N
R
S
R
------
E
Y
Q
L
N
----
D
----
S
A
K
Y
Y
L
D
S
L
-----
D
R
-------------
I
G
A
----
G
D
Y
Q
P
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
HHSearch
39.23
19%
-234
* C5 *
1Q90
2
PETG_CHLRE
G:
[19-30]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
G
L
-
F
--
V
T
A
--
Y
L
Q
Y
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------
11
PsiBlast_PDB
38.64
33%
-211
- C5 -
4GRV
1
ENLYS_BPT4 (first)
A:
[121-179]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
Y
A
T
A
L
N
V
A
----------
S
---
L
S
V
A
R
Y
L
A
I
C
-
H
P
F
K
-
A
K
T
L
M
S
---------
R
S
R
T
K
K
F
I
S
A
I
W
L
A
S
A
L
L
A
-
I
---
P
M
------------------------
L
F
----------------
T
M
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
37.52
33%
-216
- C5 -
4XES
1
ENLYS_BPT4 (first)
A:
[121-230]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
Y
A
T
A
L
N
V
A
----------
S
---
L
S
V
A
R
Y
L
A
I
C
-
H
P
F
K
-
A
K
T
L
M
S
---------
R
S
R
T
K
K
F
I
S
A
I
W
L
A
S
A
L
L
A
-
I
---
P
M
------------------------
L
F
----------------
T
M
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
13
PsiBlast_PDB
35.52
33%
-199
- C5 -
4XEE
-
ENLYS_BPT4
A:
[121-229]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
Y
A
T
A
L
N
V
A
----------
S
---
L
S
V
E
R
Y
L
A
I
C
-
H
P
F
K
-
A
K
T
L
M
S
---------
R
S
R
T
K
K
F
I
S
A
I
W
L
A
S
A
L
L
A
-
I
---
P
M
------------------------
L
F
----------------
T
M
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
34.89
32%
-191
- C5 -
3ZEV
2
NTR1_RAT
A:
[106-173]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
C
T
Y
A
T
A
L
N
V
V
----------
S
---
L
S
V
E
L
Y
L
A
I
C
-
H
P
F
K
-
A
K
T
L
M
S
---------
R
S
R
T
K
K
F
I
S
A
I
W
L
A
S
A
L
L
A
-
I
---
P
M
------------------------
L
F
----------------
T
M
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
34.77
32%
-190
- C5 -
4BUO
4
NTR1_RAT
A:
[105-170]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
C
T
Y
A
T
A
L
N
V
V
----------
S
---
L
S
V
E
L
Y
L
A
I
C
-
H
P
F
K
-
A
K
T
L
M
S
---------
R
S
R
T
K
K
F
I
S
A
I
W
L
A
S
A
L
L
A
-
I
---
P
M
------------------------
L
F
----------------
T
M
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
34.28
32%
-203
- C5 -
4BWB
-
NTR1_RAT
A:
[106-174]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
C
T
Y
A
T
A
L
N
V
V
----------
S
---
L
S
V
E
L
Y
L
A
I
C
-
H
P
F
K
-
A
K
T
L
M
S
---------
R
S
R
T
K
K
F
I
S
A
I
W
L
A
S
A
L
L
A
-
I
---
P
M
------------------------
L
F
----------------
T
M
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_CBE
34.12
33%
-181
- C5 -
3ZEV
1
NTR1_RAT
B:
[108-173]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
Y
A
T
A
L
N
V
V
----------
S
---
L
S
V
E
L
Y
L
A
I
C
-
H
P
F
K
-
A
K
T
L
M
S
---------
R
S
R
T
K
K
F
I
S
A
I
W
L
A
S
A
L
L
A
-
I
---
P
M
------------------------
L
F
----------------
T
M
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
33.77
11%
-143
- C5 -
3QAP
7
BACS2_NATPH
A:
[157-219]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
S
L
Y
--
V
R
L
R
N
L
T
V
I
-
L
---
W
A
------------------------
I
Y
----------------
P
F
I
W
L
L
G
P
P
G
V
A
------
L
L
T
P
T
V
D
V
A
L
I
V
---
Y
L
D
L
V
T
K
V
G
--------
F
G
F
I
A
L
D
A
A
------
A
T
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_CBE
33.46
33%
-177
- C5 -
4BUO
3
NTR1_RAT
B:
[107-162]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
Y
A
T
A
L
N
V
V
----------
S
---
L
S
V
E
L
Y
L
A
I
C
-
H
P
F
K
-
A
K
T
L
M
S
---------
R
S
R
T
K
K
F
I
S
A
I
W
L
A
S
A
L
L
A
-
I
---
P
M
------------------------
L
F
----------------
T
M
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
HHSearch
30.48
14%
-156
- C5 -
3MK7
4
CCON1_PSEST
A:
[303-402]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
D
P
I
L
R
---
F
L
V
--
V
S
-
L
A
F
Y
G
M
---
S
T
F
-----
E
G
P
M
M
A
I
K
--
T
V
-------------------------------------
N
A
L
--
S
H
Y
-----
T
D
W
T
I
G
H
V
H
A
G
-----------------
A
LG
W
V
A
M
V
S
--
I
-
G
A
L
Y
H
L
-
V
P
K
VFGREQMH
S
I
G
L
I
N
T
H
F
W
-----
L
A
T
I
G
T
---------
V
L
Y
I
A
S
M
W
V
N
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
29.58
32%
-178
- C5 -
4BV0
-
NTR1_RAT
A:
[108-174]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
Y
A
T
A
L
N
V
V
----------
S
---
L
S
V
E
L
Y
L
A
I
R
-
H
P
------
L
M
S
---------
R
S
R
T
K
K
F
I
S
A
I
W
L
A
S
A
L
L
A
-
I
---
P
M
------------------------
L
F
----------------
T
V
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
28.01
30%
-73
- C5 -
3LDL
-
GRP78_HUMAN
A:
[108-150]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
I
-----
G
G
-------------
G
Q
T
----
K
T
F
A
P
----
E
E
I
S
A
M
V
L
T
K
M
K
--------
E
T
A
-
E
---
A
Y
L
--
G
K
K
V
-
T
H
A
V
V
T
V
P
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
27.11
30%
-47
- C5 -
3LDP
-
GRP78_HUMAN
A:
[108-150]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
I
-----
G
G
-------------
G
Q
T
----
K
T
F
A
P
----
E
E
I
S
A
M
V
L
T
K
M
K
--------
E
T
A
-
E
---
A
Y
L
--
G
K
K
V
-
T
H
A
V
V
T
V
P
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
Fugue
26.85
16%
-8
* C6 *
4UN1
1
?
B:
[21-179]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
S
H
Q
F
S
P
E
--------
E
Q
A
V
L
R
I
V
Q
A
-----------
N
---
L
P
D
S
L
T
P
Y
A
D
L
------
A
E
Q
A
G
----
M
----
T
E
A
Q
V
L
E
L
L
-----
G
R
-------------
L
K
A
----
S
G
-
A
I
----
R
R
F
G
A
---
S
I
K
H
--------
Q
K
T
-
G
---
W
T
H
--
N
A
M
V
-
A
W
K
V
T
P
D
Q
V
D
------
D
C
G
-------
R
K
A
A
E
HS
H
I
S
H
V
Y
Y
R
P
S
S
A
P
-------
D
W
P
Y
E
------------
M
Y
T
M
I
------
H
G
-
R
S
E
A
E
C
L
G
V
V
E
D
V
K
R
--
T
T
S
L
-----
K
E
H
A
-
I
--
L
R
S
--
L
K
E
L
K
K
T
S
M
T
Y
F
T
-----------------------------------------------------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
26.29
30%
-38
- C5 -
3IUC
-
GRP78_HUMAN
A:
[129-171]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
I
-----
G
G
-------------
G
Q
T
----
K
T
F
A
P
----
E
E
I
S
A
M
V
L
T
K
M
K
--------
E
T
A
-
E
---
A
Y
L
--
G
K
K
V
-
T
H
A
V
V
T
V
P
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------