@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu22840: (2016-07-05 )
MGKPVVAIVGRPNVGKSTIFNRIAGERISIVEDTPGVTRDRIYSSAEWLNYDFNLIDTGGIDIGDEPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEEVAKILYRTKKPVVLAVNKLDNTEMRANIYDFYSLGFGEPYPISGTHGLGLGDLLDAVAEHFKNIPETKYNEEVIQFCLIGRPNVGKSSLVNAMLGEERVIVSNVAGTTRDAVDTSFTYNQQEFVIVDTAGMRKKGKVYETTEKYSVLRALKAIDRSEVVAVVLDGEEGIIEQDKRIAGYAHEAGKAVVIVVNKWDAVDKDESTMKEFEENIRDHFQFLDYAPILFMSALTKKRIHTLMPAIIKASENHSLRVQTNVLNDVIMDAVAMNPTPTHNGSRLKIYYATQVSVKPPSFVVFVNDPELMHFSYERFLENRIRDAFGFEGTPIKIFARARK
Atome Classification :
(26 SA)
.........10........20........30........40.......-.50.........60.....--...70.--...-...-.---80........90........100...-....110.......120....--.--..----130..-----.------.-...140.......150.......160..----.--...----.170...--------....180.......190.......200.......210.......220.......230.......240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......-420.......430.....
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MGK
P
V
V
A
I
VGRPNV
G
K
S
T
I
F
N
R
IAG
E
R
I
S
I
VEDTPGV
T
R
D
R
IYSSA
E
W
-LN-YDF
N
L
IDTGGIDIGDE--
P
F
L
A
Q
I
--
R
Q
Q
-
A
E
I-A---MDEA
D
V
I
I
F
M
VNGREGVT
A
A
D
E
E
V
A
K
-
I
L
Y
RTKK
P
V
V
L
A
V
NKLDN
T
E
M
--
R
--
A
N
----
I
Y
D
F
Y
-----S------L-GFGEPYPISGTHGL
G
L
G
D
L
L
D
A
V
A
E
H
F
K----N--IPE----TK
Y
N
E
E
V
--------
I
Q
F
C
LIGRPNV
G
K
S
S
L
V
N
A
M
LGEE
R
V
I
V
SNVAGTTRDAVDTSFTYN
Q
Q
E
F
V
I
V
DTAGMRKKGK
V
Y
E
T
T
E
K
Y
S
V
L
R
A
L
K
AIDRS
E
V
V
A
V
V
LDGEE
G
I
I
E
Q
D
K
R
I
AGYAHEAG
K
A
V
V
I
V
V
NKWDAVDK
D
E
S
T
M
K
E
F
E
E
N
I
R
D
H
F
Q
F
L
D
Y
A
P
I
L
F
M
S
A
L
T
K
K
R
I
H
T
L
M
P
A
I
I
KASEN
H
S
L
R
V
Q
T
N
V
L
N
D
V
I
M
D
A
VAMNPTPTHNG
S
R
L
K
I
Y
Y
A
T
Q
V
SVKP
P
S
F
V
V
F
VNDP
E
L
M
H
F
S
Y
E
R
F
L
E
N
R
I
R
D
-AFGFEGT
P
I
K
I
-
F
A
RARK
1
PsiBlast_PDB
84.68
100%
-147
- C1 -
4DCS
2
DER_BACSU
A:
[23-455]
--
K
P
V
V
A
I
V
G
R
P
N
V
G
K
S
T
I
F
N
R
I
A
G
E
R
I
S
-----------
R
I
Y
S
S
A
E
W
-
L
N
-
Y
D
F
N
L
I
D
T
G
G
--------
P
F
L
A
Q
I
--
R
Q
Q
-
A
E
I
-
A
---
M
D
E
A
D
V
I
I
F
M
V
N
G
R
E
G
V
T
A
A
D
E
E
V
A
K
-
I
L
Y
R
T
K
K
P
V
V
L
A
V
N
K
L
----
M
--
R
--
A
N
----
I
Y
D
F
Y
-----
S
------
L
-
G
F
G
E
P
Y
P
I
S
G
T
H
G
L
G
L
G
D
L
L
D
A
V
A
E
H
F
K
----
N
--
I
P
E
----
T
K
Y
N
E
E
V
--------
I
Q
F
C
L
I
G
R
P
N
V
G
K
S
S
L
V
N
A
M
L
G
E
E
R
V
I
V
S
N
------
D
A
V
D
T
S
F
T
Y
N
Q
Q
E
F
V
I
V
D
T
A
G
M
R
K
K
G
K
V
Y
E
T
T
E
K
Y
S
V
L
R
A
L
K
A
I
D
R
S
E
V
V
A
V
V
L
D
G
E
E
G
I
I
E
Q
D
K
R
I
A
G
Y
A
H
E
A
G
K
A
V
V
I
V
V
N
K
W
D
A
V
D
K
D
E
S
T
M
K
E
F
E
E
N
I
R
D
H
F
Q
F
L
D
Y
A
P
I
L
F
M
S
A
L
T
K
K
R
I
H
T
L
M
P
A
I
I
K
A
S
E
N
H
S
L
R
V
Q
T
N
V
L
N
D
V
I
M
D
A
V
A
M
N
P
T
P
T
H
N
G
S
R
L
K
I
Y
Y
A
T
Q
V
S
V
K
P
P
S
F
V
V
F
V
N
D
P
E
L
M
H
F
S
Y
E
R
F
L
E
N
R
I
R
D
-
A
F
G
F
E
G
T
P
I
K
I
-
F
A
R
A
R
-
4
PsiBlast_PDB
83.93
97%
-146
- C1 -
2HJG
3
DER_BACSU
A:
[3-436]
--
K
P
V
V
A
I
V
G
R
P
N
V
G
K
S
T
I
F
N
R
I
A
G
E
R
I
S
-----------
R
I
Y
S
S
A
E
W
-
L
N
-
Y
D
F
N
L
I
D
-----------
P
F
L
A
Q
I
--
R
Q
Q
-
A
E
I
-
A
---
M
D
E
A
D
V
I
I
F
M
V
N
G
R
E
G
V
T
A
A
D
E
E
V
A
K
-
I
L
Y
R
T
K
K
P
V
V
L
A
V
N
K
L
D
N
---------
N
----
I
Y
D
F
Y
-----
S
------
L
-
G
F
G
E
P
Y
P
I
S
G
T
H
G
L
G
L
G
D
L
L
D
A
V
A
E
H
F
K
----
N
--
I
P
E
----
T
K
Y
N
E
E
V
--------
I
Q
F
C
L
I
G
R
P
N
V
G
K
S
S
L
V
N
A
M
L
G
E
E
R
V
I
V
S
---------
V
D
T
S
F
T
Y
N
Q
Q
E
F
V
I
V
D
T
A
G
M
R
K
K
G
K
V
Y
E
T
T
E
K
Y
S
V
L
R
A
L
K
A
I
D
R
S
E
V
V
A
V
V
L
D
G
E
E
G
I
I
E
Q
D
K
R
I
A
G
Y
A
H
E
A
G
K
A
V
V
I
V
V
N
K
W
D
A
V
D
K
D
E
S
T
M
K
E
F
E
E
N
I
R
D
H
F
Q
F
L
D
Y
A
P
I
L
F
M
S
A
L
T
K
K
R
I
H
T
L
M
P
A
I
I
K
A
S
E
N
H
S
L
R
V
Q
T
N
V
L
N
D
V
I
M
D
A
V
A
M
N
P
T
P
T
H
N
G
S
R
L
K
I
Y
Y
A
T
Q
V
S
V
K
P
P
S
F
V
V
F
V
N
D
P
E
L
M
H
F
S
Y
E
R
F
L
E
N
R
I
R
D
-
A
F
G
F
E
G
T
P
I
K
I
-
F
A
R
A
R
K
3
PsiBlast_PDB
83.75
100%
-150
- C1 -
4DCV
1
DER_BACSU
A:
[23-456]
--
K
P
V
V
A
I
V
G
R
P
N
V
G
K
S
T
I
F
N
R
I
A
G
E
R
I
S
-----------
R
I
Y
S
S
A
E
W
-
L
N
-
Y
D
F
N
L
I
D
T
G
G
--------
P
F
L
A
Q
I
--
R
Q
Q
-
A
E
I
-
A
---
M
D
E
A
D
V
I
I
F
M
V
N
G
R
E
G
V
T
A
A
D
E
E
V
A
K
-
I
L
Y
R
T
K
K
P
V
V
L
A
V
N
K
L
-----------------
Y
D
F
Y
-----
S
------
L
-
G
F
G
E
P
Y
P
I
S
G
T
H
G
L
G
L
G
D
L
L
D
A
V
A
E
H
F
K
----
N
--
I
P
E
----
T
K
Y
N
E
E
V
--------
I
Q
F
C
L
I
G
R
P
N
V
G
K
S
S
L
V
N
A
M
L
G
E
E
R
V
I
V
S
N
------
D
A
V
D
T
S
F
T
Y
N
Q
Q
E
F
V
I
V
D
T
A
G
M
R
K
K
G
K
V
Y
E
T
T
E
K
Y
S
V
L
R
A
L
K
A
I
D
R
S
E
V
V
A
V
V
L
D
G
E
E
G
I
I
E
Q
D
K
R
I
A
G
Y
A
H
E
A
G
K
A
V
V
I
V
V
N
K
W
D
A
V
D
K
D
E
S
T
M
K
E
F
E
E
N
I
R
D
H
F
Q
F
L
D
Y
A
P
I
L
F
M
S
A
L
T
K
K
R
I
H
T
L
M
P
A
I
I
K
A
S
E
N
H
S
L
R
V
Q
T
N
V
L
N
D
V
I
M
D
A
V
A
M
N
P
T
P
T
H
N
G
S
R
L
K
I
Y
Y
A
T
Q
V
S
V
K
P
P
S
F
V
V
F
V
N
D
P
E
L
M
H
F
S
Y
E
R
F
L
E
N
R
I
R
D
-
A
F
G
F
E
G
T
P
I
K
I
-
F
A
R
A
R
K
71
HHSearch
83.39
100%
-145
- C1 -
4DCU
2
DER_BACSU
A:
[23-454]
--
K
P
V
V
A
I
V
G
R
P
N
V
G
K
S
T
I
F
N
R
I
A
G
E
R
I
S
-----------
R
I
Y
S
S
A
E
W
-
L
N
-
Y
D
F
N
L
I
D
T
G
G
--------
P
F
L
A
Q
I
--
R
Q
Q
-
A
E
I
-
A
---
M
D
E
A
D
V
I
I
F
M
V
N
G
R
E
G
V
T
A
A
D
E
E
V
A
K
-
I
L
Y
R
T
K
K
P
V
V
L
A
V
N
K
L
-----------------
Y
D
F
Y
-----
S
------
L
-
G
F
G
E
P
Y
P
I
S
G
T
H
G
L
G
L
G
D
L
L
D
A
V
A
E
H
F
K
----
N
--
I
P
E
----
T
K
Y
N
E
E
V
--------
I
Q
F
C
L
I
G
R
P
N
V
G
K
S
S
L
V
N
A
M
L
G
E
E
R
V
I
V
S
N
------
D
A
V
D
T
S
F
T
Y
N
Q
Q
E
F
V
I
V
D
T
A
G
M
R
K
K
G
K
V
Y
E
T
T
E
K
Y
S
V
L
R
A
L
K
A
I
D
R
S
E
V
V
A
V
V
L
D
G
E
E
G
I
I
E
Q
D
K
R
I
A
G
Y
A
H
E
A
G
K
A
V
V
I
V
V
N
K
W
D
A
V
D
K
D
E
S
T
M
K
E
F
E
E
N
I
R
D
H
F
Q
F
L
D
Y
A
P
I
L
F
M
S
A
L
T
K
K
R
I
H
T
L
M
P
A
I
I
K
A
S
E
N
H
S
L
R
V
Q
T
N
V
L
N
D
V
I
M
D
A
V
A
M
N
P
T
P
T
H
N
G
S
R
L
K
I
Y
Y
A
T
Q
V
S
V
K
P
P
S
F
V
V
F
V
N
D
P
E
L
M
H
F
S
Y
E
R
F
L
E
N
R
I
R
D
-
A
F
G
F
E
G
T
P
I
K
I
-
F
A
R
A
--
2
PsiBlast_PDB
83.17
100%
-145
- C1 -
4DCU
2
DER_BACSU
A:
[23-454]
--
K
P
V
V
A
I
V
G
R
P
N
V
G
K
S
T
I
F
N
R
I
A
G
E
R
I
S
-----------
R
I
Y
S
S
A
E
W
-
L
N
-
Y
D
F
N
L
I
D
T
G
G
--------
P
F
L
A
Q
I
--
R
Q
Q
-
A
E
I
-
A
---
M
D
E
A
D
V
I
I
F
M
V
N
G
R
E
G
V
T
A
A
D
E
E
V
A
K
-
I
L
Y
R
T
K
K
P
V
V
L
A
V
N
K
L
-----------------
Y
D
F
Y
-----
S
------
L
-
G
F
G
E
P
Y
P
I
S
G
T
H
G
L
G
L
G
D
L
L
D
A
V
A
E
H
F
K
----
N
--
I
P
E
----
T
K
Y
N
E
E
V
--------
I
Q
F
C
L
I
G
R
P
N
V
G
K
S
S
L
V
N
A
M
L
G
E
E
R
V
I
V
S
N
------
D
A
V
D
T
S
F
T
Y
N
Q
Q
E
F
V
I
V
D
T
A
G
M
R
K
K
G
K
V
Y
E
T
T
E
K
Y
S
V
L
R
A
L
K
A
I
D
R
S
E
V
V
A
V
V
L
D
G
E
E
G
I
I
E
Q
D
K
R
I
A
G
Y
A
H
E
A
G
K
A
V
V
I
V
V
N
K
W
D
A
V
D
K
D
E
S
T
M
K
E
F
E
E
N
I
R
D
H
F
Q
F
L
D
Y
A
P
I
L
F
M
S
A
L
T
K
K
R
I
H
T
L
M
P
A
I
I
K
A
S
E
N
H
S
L
R
V
Q
T
N
V
L
N
D
V
I
M
D
A
V
A
M
N
P
T
P
T
H
N
G
S
R
L
K
I
Y
Y
A
T
Q
V
S
V
K
P
P
S
F
V
V
F
V
N
D
P
E
L
M
H
F
S
Y
E
R
F
L
E
N
R
I
R
D
-
A
F
G
F
E
G
T
P
I
K
I
-
F
A
R
A
--
21
PsiBlast_CBE
51.87
100%
-155
- C1 -
4KYU
5
DER_BACSU
B:
[3-163]
--
K
P
V
V
A
I
V
G
R
P
N
V
G
K
S
T
I
F
N
R
I
A
-----------------
I
Y
S
S
A
E
W
--
N
-
Y
D
F
N
L
I
D
T
G
G
I
D
I
G
D
E
--
P
F
L
A
Q
I
--
R
Q
Q
-
A
E
I
-
A
---
M
D
E
A
D
V
I
I
F
M
V
N
G
R
E
G
V
T
A
A
D
E
E
V
A
K
-
I
L
Y
R
T
K
K
P
V
V
L
A
V
N
K
L
D
N
T
E
M
--
R
--
A
N
----
I
Y
D
F
Y
-----
S
------
L
-
G
F
G
E
P
Y
P
I
S
G
T
H
G
L
G
L
G
D
L
L
D
A
V
A
E
H
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
76
HHSearch
50.74
100%
-130
- C1 -
4KYU
5
DER_BACSU
A:
[2-162]
-
G
K
P
V
V
A
I
V
G
R
P
N
V
G
K
S
T
I
F
N
R
I
A
G
E
R
I
----------
R
D
R
I
Y
S
S
A
E
W
-
L
N
-
Y
D
F
N
L
I
D
T
G
G
I
D
I
G
D
E
--
P
F
L
A
Q
I
--
R
Q
Q
-
A
E
I
-
A
---
M
D
E
A
D
V
I
I
F
M
V
N
G
R
E
G
V
T
A
A
D
E
E
V
A
K
-
I
L
Y
R
T
K
K
P
V
V
L
A
V
N
K
L
D
N
T
E
M
--
R
--
A
N
----
I
Y
D
F
Y
-----
S
------
L
-
G
F
G
E
P
Y
P
I
S
G
T
H
G
L
G
L
G
D
L
L
D
A
V
A
E
H
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
50.34
100%
-131
- C1 -
4KYU
6
DER_BACSU
A:
[2-163]
-
G
K
P
V
V
A
I
V
G
R
P
N
V
G
K
S
T
I
F
N
R
I
A
G
E
R
I
----------
R
D
R
I
Y
S
S
A
E
W
-
L
N
-
Y
D
F
N
L
I
D
T
G
G
I
D
I
G
D
E
--
P
F
L
A
Q
I
--
R
Q
Q
-
A
E
I
-
A
---
M
D
E
A
D
V
I
I
F
M
V
N
G
R
E
G
V
T
A
A
D
E
E
V
A
K
-
I
L
Y
R
T
K
K
P
V
V
L
A
V
N
K
L
D
N
T
E
M
--
R
--
A
N
----
I
Y
D
F
Y
-----
S
------
L
-
G
F
G
E
P
Y
P
I
S
G
T
H
G
L
G
L
G
D
L
L
D
A
V
A
E
H
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
69
HHSearch
49.90
38%
9
- C1 -
1MKY
6
DER_THEMA
A:
[2-439]
---
A
T
V
L
I
V
G
R
P
N
V
G
K
S
T
L
F
N
K
L
V
K
--------------
D
P
V
Q
D
T
V
E
W
-
Y
G
-
K
T
F
K
L
V
D
T
C
G
V
F
D
N
P
Q
D-
I
I
S
Q
K
M
--
K
E
V
-
T
L
N
-
M
---
I
R
E
A
D
L
V
L
F
V
V
D
G
K
R
G
I
T
K
E
D
E
S
L
A
D
-
F
L
R
K
S
T
V
D
T
I
L
V
A
N
K
A
E
N
L
R
E
--
F
E
R
E
V
----
K
P
E
L
Y
-----
S
------
L
-
G
F
G
E
P
I
P
V
S
A
E
H
N
I
N
L
D
T
M
L
E
T
I
I
K
K
L
E
----
E
--
K
G
L
DLES
K
P
E
I
T
D
A
--------
I
K
V
A
I
V
G
R
P
N
V
G
K
S
T
L
F
N
A
I
L
N
K
E
R
A
L
V
S
P
I
P
------
V
D
D
E
V
F
I
D
G
R
K
Y
V
F
V
D
T
A
G
L
----------
E
K
Y
S
N
Y
R
V
V
D
S
I
E
K
A
D
V
V
V
I
V
L
D
A
T
Q
G
I
T
R
Q
D
Q
R
M
A
G
L
M
E
R
R
G
R
A
S
V
V
V
F
N
K
W
D
L
V
V
H
R
E
K
R
Y
D
E
F
T
K
L
F
R
E
K
L
Y
F
I
D
Y
S
P
L
I
F
T
S
A
D
K
G
W
N
I
D
R
M
I
D
A
M
N
L
A
Y
A
S
Y
T
T
K
V
P
S
S
A
I
N
S
A
L
Q
K
V
L
A
F
T
N
L
P
R
----
G
L
K
I
F
F
G
V
Q
V
D
I
K
P
P
T
F
L
F
F
V
N
S
I
E
K
V
K
N
P
Q
K
I
F
L
R
K
L
I
R
D
Y
V
F
P
F
E
G
S
P
I
F
L
-
K
F
K
R
S
R
7
PsiBlast_PDB
49.80
37%
5
- C1 -
1MKY
6
DER_THEMA
A:
[4-439]
-----
V
L
I
V
G
R
P
N
V
G
K
S
T
L
F
N
K
L
V
K
--------------
D
P
V
Q
D
T
V
E
W
-
Y
G
-
K
T
F
K
L
V
D
T
C
G
V
F
D
N
P
Q
--
D
I
I
S
Q
K
--
M
K
E
-
V
T
L
N
M
---
I
R
E
A
D
L
V
L
F
V
V
D
G
K
R
G
I
T
K
E
D
E
S
L
A
D
-
F
L
R
K
S
T
V
D
T
I
L
V
A
N
K
A
E
N
L
R
E
F
E
R
--
E
V
----
K
P
E
L
Y
-----
S
------
L
-
G
F
G
E
P
I
P
V
S
A
E
H
N
I
N
L
D
T
M
L
E
T
I
I
K
K
L
E
E
K
GL
D
--
L
E
S
----
K
P
E
I
T
D
A
--------
I
K
V
A
I
V
G
R
P
N
V
G
K
S
T
L
F
N
A
I
L
N
K
E
R
A
L
V
S
P
I
P
------
V
D
D
E
V
F
I
D
G
R
K
Y
V
F
V
D
T
A
G
L
----------
E
K
Y
S
N
Y
R
V
V
D
S
I
E
K
A
D
V
V
V
I
V
L
D
A
T
Q
G
I
T
R
Q
D
Q
R
M
A
G
L
M
E
R
R
G
R
A
S
V
V
V
F
N
K
W
D
L
V
V
H
R
E
K
R
Y
D
E
F
T
K
L
F
R
E
K
L
Y
F
I
D
Y
S
P
L
I
F
T
S
A
D
K
G
W
N
I
D
R
M
I
D
A
M
N
L
A
Y
A
S
Y
T
T
K
V
P
S
S
A
I
N
S
A
L
Q
K
V
L
A
F
T
N
L
P
R
G
----
L
K
I
F
F
G
V
Q
V
D
I
K
P
P
T
F
L
F
F
V
N
S
I
E
K
V
K
N
P
Q
K
I
F
L
R
K
L
I
R
D
Y
V
F
P
F
E
G
S
P
I
F
L
K
F
K
R
S
R
-
70
HHSearch
48.17
40%
-27
- C1 -
3J8G
-
DER_ECOLI
X:
[1-460]
-
M
V
P
V
V
A
L
V
G
R
P
N
V
G
K
S
T
L
F
N
R
L
T
R
T
R
D
A
-----------
R
K
Y
G
R
A
E
I
-
E
G
-
R
E
F
I
C
I
D
--------
D
--
G
V
E
T
R
M
--
A
E
Q
-
S
L
L
-
A
---
I
E
E
A
D
V
V
L
F
M
V
D
A
R
A
G
L
M
P
A
D
E
A
I
A
K
-
H
L
R
S
R
E
K
P
T
F
L
V
A
N
K
T
D
G
L
D
P
--
D
--
Q
A
----
V
V
D
F
Y
-----
S
------
L
-
G
L
G
E
I
Y
P
I
A
A
S
H
G
R
G
V
L
S
L
L
E
H
V
L
L
P
W
M
----
E
--
D
L
A
PQD-
F
D
P
Q
S
L
P
--------
I
K
L
A
I
V
G
R
P
N
V
G
K
S
T
L
T
N
R
I
L
G
E
E
R
V
V
V
Y
D
M
P
G
T
T
R
D
S
I
Y
I
P
M
E
R
D
G
R
E
Y
V
L
I
D
T
A
G
V
R
K
R
G
K
I
T
D
A
V
E
K
F
S
V
I
K
T
L
Q
A
I
E
D
A
N
V
V
M
L
V
I
D
A
R
E
G
I
S
D
Q
D
L
S
L
L
G
F
I
L
N
S
G
R
S
L
V
I
V
V
N
K
W
D
G
L
S
Q
E
V
--
K
E
Q
V
K
E
T
L
D
F
R
L
G
F
I
D
F
A
R
V
H
F
I
S
A
L
H
G
S
G
V
G
N
L
F
E
S
V
R
E
A
Y
D
S
S
T
R
R
V
G
T
S
M
L
T
R
I
M
T
M
A
V
E
D
H
Q
P
P
L
V
R
G
R
R
V
K
L
K
Y
A
H
A
G
G
Y
N
P
P
I
V
V
I
H
G
N
Q
V
K
D
L
P
D
S
Y
K
R
Y
L
M
N
Y
F
R
K
-
S
L
D
V
M
G
S
P
I
R
I
-
Q
F
K
E
G
-
6
PsiBlast_PDB
45.28
38%
-16
- C1 -
3J8G
-
DER_ECOLI
X:
[3-455]
---
P
V
V
A
L
V
G
R
P
N
V
G
K
S
T
L
F
N
R
L
T
R
T
R
D
A
-----------
R
K
Y
G
R
A
E
I
-
E
G
-
R
E
F
I
C
I
D
--------
D
--
G
V
E
T
R
M
--
A
E
Q
-
S
L
L
-
A
---
I
E
E
A
D
V
V
L
F
M
V
D
A
R
A
G
L
M
P
A
D
E
A
I
A
K
-
H
L
R
S
R
E
K
P
T
F
L
V
A
N
K
T
D
G
L
D
P
--
D
--
Q
A
----
V
V
D
F
Y
-----
S
------
L
-
G
L
G
E
I
Y
P
I
A
A
S
H
G
R
G
V
L
S
L
L
E
H
V
L
L
P
W
M
----
E
DL
A
P
Q
-----------DFDPQSLP
I
K
L
A
I
V
G
R
P
N
V
G
K
S
T
L
T
N
R
I
L
G
E
E
R
V
V
V
Y
D
M
P
G
T
T
R
D
S
I
Y
I
P
M
E
R
D
G
R
E
Y
V
L
I
D
T
A
G
V
R
K
R
G
K
I
T
D
A
V
E
K
F
S
V
I
K
T
L
Q
A
I
E
D
A
N
V
V
M
L
V
I
D
A
R
E
G
I
S
D
Q
D
L
S
L
L
G
F
I
L
N
S
G
R
S
L
V
I
V
V
N
K
W
D
G
L
S
Q
E
--
V
K
E
Q
V
K
E
T
L
D
F
R
L
G
F
I
D
F
A
R
V
H
F
I
S
A
L
H
G
S
G
V
G
N
L
F
E
S
V
R
E
A
Y
D
S
S
T
R
R
V
G
T
S
M
L
T
R
I
M
T
M
A
V
E
D
H
Q
P
P
L
V
R
G
R
R
V
K
L
K
Y
A
H
A
G
G
Y
N
P
P
I
V
V
I
H
G
N
Q
V
K
D
L
P
D
S
Y
K
R
Y
L
M
N
Y
F
R
K
-
S
L
D
V
M
G
S
P
I
R
I
-------
84
HHSearch
42.65
44%
-127
- C1 -
2DYK
1
?
A:
[2-159]
---
H
K
V
V
I
V
G
R
P
N
V
G
K
S
S
L
F
N
R
L
L
K
K
R
S
-----------
D
L
K
E
G
V
V
E
T
-
D
R
-
G
R
F
L
L
V
D
T
G
G
L
W
S
G
D
K
---
W
E
K
K
I
--
Q
E
K
-
V
D
R
-
A
---
L
E
D
A
E
V
V
L
F
A
V
D
G
R
A
E
L
T
Q
A
D
Y
E
V
A
E
-
Y
L
R
R
K
G
K
P
V
I
L
V
A
T
K
V
D
D
P
K
H
--
E
--
L
Y
----
L
G
P
L
Y
-----
G
------
L
-
G
F
G
D
P
I
P
T
S
S
E
H
A
R
G
L
E
E
L
L
E
A
I
W
E
R
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
PsiBlast_CBE
42.16
43%
-136
- C1 -
2DYK
2
?
B:
[4-160]
-----
V
V
I
V
G
R
P
N
V
G
K
S
S
L
F
N
R
L
L
K
K
R
S
-----------
D
L
K
E
G
V
V
E
T
-
D
R
-
G
R
F
L
L
V
D
T
G
G
L
W
S
G
D
K
---
W
E
K
K
I
--
Q
E
K
-
V
D
R
-
A
---
L
E
D
A
E
V
V
L
F
A
V
D
G
R
A
E
L
T
Q
A
D
Y
E
V
A
E
-
Y
L
R
R
K
G
K
P
V
I
L
V
A
T
K
V
D
D
P
K
H
--
E
--
L
Y
----
L
G
P
L
Y
-----
G
------
L
-
G
F
G
D
P
I
P
T
S
S
E
H
A
R
G
L
E
E
L
L
E
A
I
W
E
R
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
42.11
43%
-133
- C1 -
2DYK
1
?
A:
[4-160]
-----
V
V
I
V
G
R
P
N
V
G
K
S
S
L
F
N
R
L
L
K
K
R
S
-----------
D
L
K
E
G
V
V
E
T
-
D
R
-
G
R
F
L
L
V
D
T
G
G
L
W
S
G
D
K
---
W
E
K
K
I
--
Q
E
K
-
V
D
R
-
A
---
L
E
D
A
E
V
V
L
F
A
V
D
G
R
A
E
L
T
Q
A
D
Y
E
V
A
E
-
Y
L
R
R
K
G
K
P
V
I
L
V
A
T
K
V
D
D
P
K
H
--
E
--
L
Y
----
L
G
P
L
Y
-----
G
------
L
-
G
F
G
D
P
I
P
T
S
S
E
H
A
R
G
L
E
E
L
L
E
A
I
W
E
R
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
89
HHSearch
40.99
28%
-150
- C1 -
3GEH
3
MNME_NOSS1
A:
[224-383]
--
G
L
K
V
A
I
V
G
R
P
N
V
G
K
S
S
L
L
N
A
W
S
Q
S
D
R
A
I
V
T
D
L
P
G
T
T
R
D
V
V
E
S
Q
L
V
V
-
G
G
-
I
P
V
Q
V
L
D
-------------------------
Q
-
A
---
A
N
T
A
D
L
V
L
L
T
I
D
A
A
T
G
W
T
T
G
D
Q
E
I
Y
E
-
Q
V
--
K
H
R
P
L
I
L
V
M
N
K
I
D
L
V
E
K
--
Q
--
L
I
----
T
S
L
E
Y
-----
P
------
E
-
N
I
T
Q
I
V
H
T
A
A
A
Q
K
Q
G
I
D
S
L
E
T
A
I
L
E
I
V
Q
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
57
PsiBlast_CBE
40.21
72%
-246
- C1 -
2DBY
1
?
A:
[4-32]
-----
V
G
I
V
G
L
P
N
V
G
K
S
T
L
F
N
A
L
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
88
HHSearch
39.34
31%
-136
- C1 -
1XZP
3
MNME_THEMA
A:
[240-405]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
N
R
G
--------
L
R
M
V
I
V
G
K
P
N
V
G
K
S
T
L
L
N
R
L
L
N
E
D
R
A
I
V
T
D
I
P
G
T
T
R
D
V
I
S
E
E
I
V
I
R
G
I
L
F
R
I
V
D
T
A
G
V
R
S
E
T
N
--
D
L
V
E
R
L
G
I
E
R
T
L
Q
E
I
E
K
A
D
I
V
L
F
V
L
D
A
S
S
P
L
D
E
E
D
R
K
I
L
E
R
I
K
--
N
K
R
Y
L
V
V
I
N
K
V
D
V
V
E
K
I
N
--
E
E
E
I
K
N
K
L
------
G
T
D
R
H
M
V
K
I
S
A
L
K
G
E
G
L
E
K
L
E
E
S
I
Y
R
E
T
Q
E
-----------------------------------------------------------------------------------------
81
HHSearch
38.69
26%
-145
- C1 -
1EGA
3
ERA_ECOLI
A:
[5-176]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
S
Y
C
--------
G
F
I
A
I
V
G
R
P
N
V
G
K
S
T
L
L
N
K
L
L
G
Q
K
I
S
I
T
S
R
K
A
Q
T
T
R
H
R
I
V
G
I
H
T
E
G
A
Y
Q
A
I
Y
V
D
T
P
G
L
H
M
E
E
K
R
--
A
I
N
R
L
M
N
K
A
A
S
S
S
I
G
D
V
E
L
V
I
F
V
V
E
G
T
R
W
-
T
P
D
D
E
M
V
L
N
K
L
R
E
G
K
A
P
V
I
L
A
V
N
K
V
D
N
V
Q
E
K
A
D
----
L
L
P
H
L
Q
F
L
A
S
Q
M
N
F
L
D
I
V
P
I
S
A
E
T
G
L
N
V
D
T
I
A
A
I
V
R
K
H
L
P
E
A
----------------------------------------------------------------------------------------
83
HHSearch
38.63
31%
-160
- C1 -
3GEH
3
MNME_NOSS1
A:
[221-383]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
R
T
G
--------
L
K
V
A
I
V
G
R
P
N
V
G
K
S
S
L
L
N
A
W
S
Q
S
D
R
A
I
V
T
D
L
P
G
T
T
R
D
V
V
E
S
Q
L
V
V
G
G
I
P
V
Q
V
L
D
-----------------------
Q
A
A
N
T
A
D
L
V
L
L
T
I
D
A
A
T
G
W
T
T
G
D
Q
E
I
Y
E
Q
V
--
K
H
R
P
L
I
L
V
M
N
K
I
D
L
V
E
K
Q
L
I
T
--
S
----
L
E
---
Y
P
E
N
I
T
Q
I
V
H
T
A
A
A
Q
K
Q
G
I
D
S
L
E
T
A
I
L
E
I
V
Q
------------------------------------------------------------------------------------------
82
HHSearch
31.35
32%
0
- C1 -
3IEV
2
ERA_AQUAE
A:
[10-182]
--
V
G
Y
V
A
I
V
G
K
P
N
V
G
K
S
T
L
L
N
N
L
L
G
T
K
V
S
I
I
S
P
K
A
G
T
T
R
M
R
V
L
G
V
K
N
I
P
N
E
-
A
Q
I
I
F
L
D
T
P
G
I
Y
E
P
K
K
SD
V
L
G
H
S
M
--
V
E
I
-
A
K
Q
-
S
---
L
E
E
A
D
V
I
L
F
M
I
D
A
T
E
G
W
R
P
R
D
E
E
I
Y
Q
N
F
I
K
P
L
N
K
P
V
I
V
V
I
N
K
I
D
K
I
G
P
--
A
--
K
N
V
L
P
L
I
D
E
I
H
-----
K
K
-----
H
P
E
L
T
E
I
V
P
I
S
A
L
K
G
A
N
L
D
E
L
V
K
T
I
L
K
Y
L
P
----
E
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
PsiBlast_CBE
30.76
32%
-58
- C1 -
3IEU
5
ERA_ECOLI
B:
[11-179]
-----
I
A
I
V
G
R
P
N
V
G
K
S
T
L
L
N
K
L
L
G
Q
K
I
S
I
T
S
R
K
A
Q
T
T
R
H
R
I
V
G
I
H
T
E
-
G
A
-
Y
Q
A
I
Y
V
D
T
P
G
L
H
M
E
E
K
--
R
A
I
N
R
L
--
M
N
K
A
A
S
S
-
S
---
I
G
D
V
E
L
V
I
F
V
V
E
G
T
R
W
-
T
P
D
D
E
M
V
L
N
-
K
L
R
E
G
K
A
P
V
I
L
A
V
N
K
V
D
N
V
Q
E
--
K
--
A
D
----
L
L
P
H
L
QFLAS
Q
------
M
-
N
F
L
D
I
V
P
I
S
A
E
T
G
L
N
V
-
D
T
I
A
A
I
V
R
--
K
----
H
--
L
P
E
----
A
T
H
H
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
PsiBlast_PDB
30.25
32%
-58
- C1 -
3IEU
4
ERA_ECOLI
A:
[11-179]
-----
I
A
I
V
G
R
P
N
V
G
K
S
T
L
L
N
K
L
L
G
Q
K
I
S
I
T
S
R
K
A
Q
T
T
R
H
R
I
V
G
I
H
T
E
-
G
A
-
Y
Q
A
I
Y
V
D
T
P
G
L
H
M
E
E
K
--
R
A
I
N
R
L
--
M
N
K
A
A
S
S
-
S
---
I
G
D
V
E
L
V
I
F
V
V
E
G
T
R
W
-
T
P
D
D
E
M
V
L
N
-
K
L
R
E
G
K
A
P
V
I
L
A
V
N
K
V
D
N
V
Q
E
--
K
--
A
D
----
L
L
P
H
L
Q
F
L
A
S
Q
------
M
-
N
F
L
D
I
V
P
I
S
A
E
T
G
L
N
V
-
D
T
I
A
A
I
V
R
--
K
----
H
--
L
P
E
----
A
T
H
H
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
PsiBlast_PDB
28.89
32%
2
- C1 -
3IEV
2
ERA_AQUAE
A:
[13-180]
-----
V
A
I
V
G
K
P
N
V
G
K
S
T
L
L
N
N
L
L
G
T
K
V
S
I
I
S
P
K
A
G
T
T
R
M
R
V
L
G
V
K
N
I
-
P
N
E
A
Q
I
I
F
L
D
T
P
G
I
---
Y
E
--
P
K
K
S
D
V
L
G
H
S
M
-
V
E
I
-
A
K
Q
S
L
E
E
A
D
V
I
L
F
M
I
D
A
T
E
G
W
R
P
R
D
E
E
I
Y
Q
N
F
I
K
P
L
N
K
P
V
I
V
V
I
N
K
I
D
K
I
G
P
--
A
--
K
N
----
V
L
P
L
I
-----
D
E
I
H
K
K
H
P
-
E
L
T
E
I
V
P
I
S
A
L
K
G
A
N
L
D
E
L
V
K
T
I
L
K
Y
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
PsiBlast_PDB
28.28
32%
1
- C1 -
3R9W
6
ERA_AQUAE
A:
[12-179]
-----
V
A
I
V
G
K
P
N
V
G
K
S
T
L
L
N
N
L
L
G
T
K
V
S
I
I
S
P
K
A
G
T
T
R
M
R
V
L
G
V
K
N
I
-
P
N
E
A
Q
I
I
F
L
D
T
P
G
I
---
Y
E
--
P
K
K
S
D
V
L
G
H
S
M
-
V
E
I
-
A
K
Q
S
L
E
E
A
D
V
I
L
F
M
I
D
A
T
E
G
W
R
P
R
D
E
E
I
Y
Q
N
F
I
K
P
L
N
K
P
V
I
V
V
I
N
K
I
D
K
I
G
P
--
A
--
K
N
----
V
L
P
L
I
-----
D
E
I
H
K
K
H
P
-
E
L
T
E
I
V
P
I
S
A
L
K
G
A
N
L
D
E
L
V
K
T
I
L
K
Y
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
17
PsiBlast_PDB
27.60
32%
8
- C1 -
3R9X
4
ERA_AQUAE
A:
[12-179]
-----
V
A
I
V
G
K
P
N
V
G
K
S
T
L
L
N
N
L
L
G
T
K
V
S
I
I
S
P
K
A
G
T
T
R
M
R
V
L
G
V
K
N
I
-
P
N
E
A
Q
I
I
F
L
D
T
P
G
I
---
Y
E
--
P
K
K
S
D
V
L
G
H
S
M
-
V
E
I
-
A
K
Q
S
L
E
E
A
D
V
I
L
F
M
I
D
A
T
E
G
W
R
P
R
D
E
E
I
Y
Q
N
F
I
K
P
L
N
K
P
V
I
V
V
I
N
K
I
D
K
I
G
P
--
A
--
K
N
----
V
L
P
L
I
-----
D
E
I
H
K
K
H
P
-
E
L
T
E
I
V
P
I
S
A
L
K
G
A
N
L
D
E
L
V
K
T
I
L
K
Y
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------