@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : bsu25560: (2016-07-10 )
MVFDVWKSLKKGEVHPVYCLYGKETYLLQETVSRIRQTVVDQETKDFNLSVFDLEEDPLDQAIADAETFPFMGERRLVIVKNPYFLTGEKKKEKIEHNVSALESYIQSPAPYTVFVLLAPYEKLDERKKLTKALKKHAFMMEAKELNAKETTDFTVNLAKTEQKTIGTEAAEHLVLLVNGHLSSIFQEIQKLCTFIGDREEITLDDVKMLVARSLEQNIFELINKIVNRKRTESLQIFYDLLKQNEEPIKIMALISNQFRLILQTKYFAEQGYGQKQIASNLKVHPFRVKLAMDQARLFSEEELRLIIEQLAVMDYEMKTGKKDKQLLLELFLLQLLKRNEKNDPHY

Atome Classification :

(20 SA) ------------------------------.........10........20........30.......----------------.40...------------------.------------------.-----------------...50....------.-----.---.---.----60........------.70---------------..-..-....80........90........100......-.110........120....---...130.......---140......--.150......-------.160---.-------......-.-.170.......180.......190......---.----200.......210..---.....220......----.230.......-240-.--......250.......260.......270.......280.......290.......300.......310.......320..-......330.......340.....-
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ------------------------------MVFDVWKSLKKGEVHPVYCLYGKETYLLQETVSRIRQT----------------VVDQET------------------K------------------D-----------------FNLSVFDLE------E-----D---P---L----D-QAIADAET------FPF---------------MG-ER-RLVIVKNPYFLTGEKKKEKIEHNVSALESYIQS-PAP-YTVFVLLAPYEKLDE---RKKLTKALKKHAF---MMEAKELNA--KETTDFTVNL-------AK-----T-------EQKTIG-T-EAAEHLVLLVNGHLSSIFQEIQKLCTFIGD---R----EEITLDDVKMLVARS---LEQNIFELINKIVN----RKRTESLQIFY-DLL-K--QNEEPIKIMALISNQFRLILQTKYFAEQGYGQKQIASNLKVHPFRVKLAMDQARLFSEEELRLIIEQLAVMDYEMKT-GKK-DKQLLLELFLLQLLKRNEKNDPHY-
26 Fugue 90.47100%-130 - C2 -3ZH9 YQEN_BACSU B:[1-339] ------------------------------MVFDVWKSLKKGEVHPVYCLYGKETYLLQETVSRIRQT----------------VVDQET------------------K------------------D-----------------FNLSVFDLE------E-----D---P---L----D-QAIADAET------FPF---------------MG-ER-RLVIVKNPYFLTGEKKKEKIEHNVSALESYIQS-PAP-YTVFVLLAPYEKLDE---RKKLTKALKKHAF---MMEAKELNA--KETTDFTVNL-------AK-----T-------EQKTIG-T-EAAEHLVLLVNGHLSSIFQEIQKLCTFIGD---R----EEITLDDVKMLVARS---LEQNIFELINKIVN----RKRTESLQIFY-DLL-K--QNEEPIKIMALISNQFRLILQTKYFAEQGYGQKQIASNLKVHPFRVKLAMDQARLFSEEELRLIIEQLAVMDYEMKT-GKK-DKQLLLELFLLQLLKR---------
6 HHSearch 90.47100%-130 - C2 -3ZH9 YQEN_BACSU B:[1-339] ------------------------------MVFDVWKSLKKGEVHPVYCLYGKETYLLQETVSRIRQT----------------VVDQET------------------K------------------D-----------------FNLSVFDLE------E-----D---P---L----D-QAIADAET------FPF---------------MG-ER-RLVIVKNPYFLTGEKKKEKIEHNVSALESYIQS-PAP-YTVFVLLAPYEKLDE---RKKLTKALKKHAF---MMEAKELNA--KETTDFTVNL-------AK-----T-------EQKTIG-T-EAAEHLVLLVNGHLSSIFQEIQKLCTFIGD---R----EEITLDDVKMLVARS---LEQNIFELINKIVN----RKRTESLQIFY-DLL-K--QNEEPIKIMALISNQFRLILQTKYFAEQGYGQKQIASNLKVHPFRVKLAMDQARLFSEEELRLIIEQLAVMDYEMKT-GKK-DKQLLLELFLLQLLKR---------
1 PsiBlast_PDB 90.47100%-130 - C2 -3ZH9 YQEN_BACSU B:[1-339] ------------------------------MVFDVWKSLKKGEVHPVYCLYGKETYLLQETVSRIRQT----------------VVDQET------------------K------------------D-----------------FNLSVFDLE------E-----D---P---L----D-QAIADAET------FPF---------------MG-ER-RLVIVKNPYFLTGEKKKEKIEHNVSALESYIQS-PAP-YTVFVLLAPYEKLDE---RKKLTKALKKHAF---MMEAKELNA--KETTDFTVNL-------AK-----T-------EQKTIG-T-EAAEHLVLLVNGHLSSIFQEIQKLCTFIGD---R----EEITLDDVKMLVARS---LEQNIFELINKIVN----RKRTESLQIFY-DLL-K--QNEEPIKIMALISNQFRLILQTKYFAEQGYGQKQIASNLKVHPFRVKLAMDQARLFSEEELRLIIEQLAVMDYEMKT-GKK-DKQLLLELFLLQLLKR---------
9 HHSearch 53.1613% 14 * C2 *1JR3 DPO3X_ECOLI A:[27-361] ---------------------------------ALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKG----------------LNCETG------------------ITATPCGVCDNCREIEQGRF-----------------VDLIEIDAA------SRTKV-E---D---T----R-DLLDNVQY------APA---------------RG-RF-KVYLIDEVHMLSR--------HSFNALLKTLEE-PPE-HVKFLLATT--DP------QKLPVTILSRCL---QFHLKALDV--EQIRHQLEHI-------LN-----E-------EHIAHE-P-RALQLLARAAEGSLRDALSLTDQAIASGDG---------QVSTQAVSAMLGTL---DDDQALSLVEAMVE----ANGERVMALIN-EAA-A--RGIEWEALLVEMLGLLHRIAMVQLSP------AALGNDMA---AIELRMRELARTIPPTDIQLYYQTLLIGRKELPY-AP--DRRMGVEMTLLRALAFHP-------
7 HHSearch 52.4816% -68 - C2 -1JR3 - HOLA_ECOLI D:[7-336] --------------------------------EQLRAQLNEG-LRAAYLLLGNDPLLLQESQDAVRQV----------------AAAQGF------------------E------------------E-----------------HHTFSIDPN------T---------D---W----N-AIFSLCQA------MSL---------------FA-SR-QTLLLLLPENGPN-------AAINEQLLTLTGL-LHD-DLLLIVRGN--KLSKAQENAAWFTALANRSV---QVTCQTPEQ--AQLPRWVAAR-------AK-----Q-------LNLELD-D-AANQVLCYCYEGNLLALAQALERLSLLWPD---G-----KLTLPRVEQAVNDA---AHFTPFHWVDALLM----GKSKRALHILQ-QLR-L--EGSEPVILLRTLQRELLLLVNLKRQSA-HTPLRALFDKHRVWQNRRGMMGEALNRLSQTQLRQAVQLLTRTELTLKQ-DYGQSVWAELEGLSLLLCHKPL-------
29 Fugue 49.7111% 13 - C2 -1JR3 DPO3X_ECOLI A:[3-368] ---------YQVLARKWRPQTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIE------------------Q------------------G-----------------RFVDLIEIDAASRTKV-----E---D---T----R-DLLDNVQY------APA---------------RG-RF-KVYLIDEVHMLS--------RHSFNALLKTLEE-PPE-HVKFLLAT-----TD---PQKLPVTILSRCL---QFHLKALDV--EQIRHQLEHI-------LN-----E-------EHIAHE-P-RALQLLARAAEGSLRDALSLTDQAIASGDG---Q------VSTQAVSAMLGTL---DDDQALSLVEAMVE----ANGERVMALIN-EAA-A--RGIEWEALLVEMLGLLHRIAMVQLSPAALGNDMAAI---------ELRMRELARTIPPTDIQLYYQTLLIGRKELPY--AP-DRRMGVEMTLLRALAFHPRMPLPEP
27 Fugue 47.5115% -2 - C2 -1JQJ - HOLA_ECOLI C:[1-333] ---------------------------MIRLYPEQLRAQLNEGLRAAYLLLGNDPLLLQESQDAVRQV----------------AAAQGF------------------E------------------E-----------------HHTFSID-P------N-----T---D---W----N-AIFSLCQA------MSL---------------FA-SR-QTLLLLLPENGPNAAINEQLLTLTG------LL-HDD-LLLIVRGNKLSKAQE---NAAWFTALANRSV---QVTCQTPEQ--AQLPRWVAAR-------AK-----Q-------LNLELD-D-AANQVLCYCYEGNLLALAQALERLSLLWPD---G----K-LTLPRVEQAVNDA---AHFTPFHWVDALLM----GKSKRALHILQ-QLR-L--EGSEPVILLRTLQRELLLLVNLKRQSAHTPLRALFDKH---RVWRRGMMGEALNRLSQTQLRQAVQLLTRTELTLKQ-DYG-QAEL--EGLSLLLCH----------
15 HHSearch 46.7214% 19 - C2 -2CHQ RFCS_ARCFU A:[37-316] -------------------------------------------NIPHLLFSGPPGTGKTATAIALARD----------------LFGE-N------------------W------------------R-----------------DNFIEMNAS------DERGIDV---V---R----H-KIKEFART------API---------------GGAPF-KIIFLDEADALTA--------DAQAALRRTMEM-YSK-SCRFILSCN--Y------VSRIIEPIQSRCA---VFRFKPVPK--EAMKKRLLEI-------CE-----K-------EGVKIT-E-DGLEALIYISGGDFRKAINALQGAAAIGE----------VVDADTIYQITATA---RPEEMTELIQTALK----GNFMEARELLD-RLM-VE-YGMSGEDIVAQLFREIISMP-IK----------------------------------DSLKVQLIDKLGEVDFRLTE-GAN--ERIQLDAYLAYLSTL---------
11 HHSearch 46.4616% 33 - C2 -1SXJ RFC3_YEAST C:[37-333] ----------------------------------VRKFVDE-GKLPHLLFYGPPGTGKTSTIVALARE----------------IYGK-N------------------Y------------------S-----------------NMVLELNAS------DDRGIDV---V---R----N-QIKDFAST------RQI---------------FSKGF-KLIILDEADAMTN--------AAQNALRRVIER-YTK-NTRFCVLAN--Y------AHKLTPALLSQCT---RFRFQPLPQ--EAIERRIANV-------LV-----H-------EKLKLS-P-NAEKALIELSNGDMRRVLNVLQSCKATLDNPD-E----DEISDDVIYECCGAP---RPSDLKAVLKSILE----DDWGTAHYTLN-KVR-SA-KGLALIDLIEGIVKILEDYEL----------------------------------QNEETRVHLLTKLADIEYSISK-GG--NDQIQGSAVIGAIKASFEN------
12 HHSearch 46.3913% -3 - C2 -1SXJ RFC5_YEAST E:[27-351] -----------------------------------KSLSDQPRDLPHLLLYGPNGTGKKTRCMALLES----------------IFGPGV------------------Y------------------RNVVSS------------PYHLEITPS-------NDR--I---V---I----Q-ELLKEVAQMEQ------------------------RY-KCVIINEANSLTK--------DAQAALRRTMEK-YSK-NIRLIMVCD--SM------SPIIAPIKSQCL---LIRCPAPSD--SEISTILSDV-------VT-----N-------ERIQLETK-DILKRIAQASNGNLRVSLLMLESMALNNE-----------LALKSSSPIIKPD---WIIVIHKLTRKIVKERSVNSLIECRAVLY-DLL-A--HCIPANIILKELTFSLL----------------------------------DVETLNTTNKSSIIEYSSVFDERLSL-GN--KAIFHLEGFIAKVMC----------
17 HHSearch 46.3716% 10 - C2 -1SXJ RFC4_YEAST B:[32-320] ---------------------------------RLQQIAKDG-NMPHMIISGMPGIGKTTSVHCLAHE----------------LLGR-S------------------Y------------------A-----------------DGVLELNAS------D-----DR--G---I----D-VVRNQIKHFAQKKLHLP---------------PG-KH-KIVILDEADSMTA--------GAQQALRRTMEL-YSN-STRFAFACN--QS------NKIIEPLQSQCA---ILRYSKLSD--EDVLKRLLQI-------IK-----L-------EDVKYT-N-DGLEAIIFTAEGDMRQAINNLQSTVAGHG----------LVNADNVFKIVDSP------HPLIVKKMLLA----SNLEDSIQILRTDLW-K--KGYSSIDIVTTSFRVTKNLAQVKES----------------------------------VRLEMIKEIGLTHMRILE-GVG--TYLQLASMLAKIHKLN--------
13 HHSearch 45.9514% -9 - C2 -1SXJ RFC2_YEAST D:[49-352] ----------------------------------LKKTLKS-ANLPHMLFYGPPGTGKTSTILALTKE----------------LYGPDL------------------M------------------K-----------------SRILELNAS------D-----ER--G---I----S-IVREKVKN------FARLTVSKPSKHDLENYPCP-PY-KIIILDEADSMTA--------DAQSALRRTMET-YSG-VTRFCLICN--YV------TRIIDPLASQCS---KFRFKALDA--SNAIDRLRFI-------SE-----Q-------ENVKCD-D-GVLERILDISAGDLRRGITLLQSASKGAQYLGDG----KNITSTQVEELAGVV---PHDILIEIVEKVKS----GDFDEIKKYVN-TFM-K--SGWSAASVVNQLHEYYITNDN----------------------------------FDTNFKNQISWLLFTTDSRLNN-GT--NEHIQLLNLLVKISQ----------
10 HHSearch 44.0013% -3 - C2 -1A5T HOLB_ECOLI A:[11-326] -------------------------------FEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRY----------------LLCQQPQGHKSCGHCRGCQLMQAGT------------------H-----------------PDYYTLAPEKGKN--TLGV--D---A---V----R-EVTEKLNE------HAR---------------LG-GA-KVVWVTDAALLTD--------AAANALLKTLEE-PPA-ETWFFLATR--EP------ERLLATLRSRCR---LHYLAPPPE--QYAVTWLSR------------------------EVTMS-Q-DALLAALRLSAGSPGAALALFQGD---------N----WQARETLCQALAYSV---PSGDWYSLLAALNH-------------------------EQAPARLHWLATLLMDALKR-----------------VTNVDVPGLVAELANHLSPSRLQAILGDVCHIREQLMSVTGI-NRELLITDLLLRIEHYLQPG-----
16 HHSearch 43.7014% 12 - C2 -1IQP RFCS_PYRFU A:[37-324] ----------------------------------LKHYVKT-GSMPHLLFAGPPGVGKTTAALALARE----------------LFGE-N------------------W------------------R-----------------HNFLELNAS------D-----ER--GINVI----REKVKEFART------KPI---------------GGASF-KIIFLDEADALTQ--------DAQQALRRTMEM-FSS-NVRFILSCN--YS------SKIIEPIQSRCA---IFRFRPLRD--EDIAKRLRYI-------AE-----N-------EGLELT-E-EGLQAILYIAEGDMRRAINILQAAAALDK----------KITDENVFMVASRA---RPEDIREMMLLALK----GNFLKAREKLR-EILLK--QGLSGEDVLVQMHKEVFNL-----------------------------------PIEEPKKVLLADKIGEYNFRLVE-GAN--EIIQLEALLAQFTLI---------
30 Fugue 42.9314% 14 - C2 -1IQP RFCS_PYRFU A:[2-327] SEEIREVKVLEKPWVEKYRPQRLDDIVGQEHIVKRLKHYVKTGSMPHLLFAGPPGVGKTTAALALARE----------------LFGENW------------------R------------------HNFLE-------------LNASDERGI------N-----V---I---R----E-KVKEFART------KPI---------------GG-ASFKIIFLDEADALT--------QDAQQALRRTMEM-FSS-NVRFILSCNY--------SSKIIEPIQSRCA---IFRFRPLRD--EDIAKRLRYI-------AE-----N-------EGLELT-E-EGLQAILYIAEGDMRRAINILQAAAA---L---D----KKITDENVFMVASRA---RPEDIREMMLLALK----GNFLKAREKLR-EIL-L--KQ--------------------------GLSGEDVLVQMHKEVFNLPI--------EEPKKVLLADKIGEYNFRLVE-GA--NEIIQLEALLAQFTLIGKK------
8 HHSearch 40.5113% 9 - C2 -2GNO ? A:[7-299] --------------------------------ETLKRIIEKSE-GISILINGEDLSYPREVSLELPEY----------------VEKFPP------------------K------------------A-----------------SDVLEIDPEGE----N-----IGIDD---I----R-TIKDFLNY------SPE---------------LY-TR-KYVIVHDCERMTQ--------QAANAFLKALEE-PPE-YAVIVLNTR--RW------HYLLPTIKSRVF---RVVVNVPKEFRDLVKEKIGDL-------WEELPLLE-------RDFKTA-L-EAYKLGAEKLSGLME-SLKVLETE-------------------KLLKKVLSKGLE-GYLACRELLERFSK----VESKEFFALFD-QVT-NTITGKDAFLLIQRLTRII---LHENTWES--VEDQKSVSFL--------DSILRVKIANLNNKLTLMNILAIHRERKR-------------------------------
22 HHSearch 39.5914% 1 - C2 -1NJG DPO3X_ECOLI A:[38-248] -------------------------------------GLSLGRIHHAYLFSGTRGVGKTSIARLLAKG----------------LNCETG------------------IT-----------------ATPCGVCDNCREIEQGRFVDLIEIDAA------SRTKV-E---D---T----R-DLLDNVQY------APA---------------RG-RF-KVYLIDEVHMLSR--------HSFNALLKTLEE-PPE-HVKFLLATT--DP------QKLPVTILSRCL---QFHLKALDV--EQIRHQLEHI-------LN-----E-------EHIAHE-P-RALQLLARAAEGSLRDALSLTDQAIASGD---------GQVSTQAVSAML------------------------------------------------------------------------------------------------------------------------------------------------------
19 HHSearch 38.9812% 3 - C2 -3PVS RARA_ECOLI A:[40-306] ---------------------------------PLPRAIEAGH-LHSMILWGPPGTGKTTLAEVIARY----------------ANAD-----------------------------------------------------------VERISAVTSG---V-----K---E---I----R-EAIERARQ------NRN---------------AG-RR-TILFVDEVHRF--------------AFLPHIED---G-TITFIGATT---ENP---SFELNSALLSRAR---VYLLKSLST--EDIEQVLTQA-------ME-----DKTRGYGGQDIVLP-D-ETRRAIAELVNGDARRALNTLEMMADMAEV---DDSGKRVLKPELLTEIAGERSARKGDRFYDLISALHKSVRGSAPDAALYWYA-RII-T--AGGDPLYVARRCL----------------------------------------------------------------------------------------------
14 HHSearch 38.4110% -35 - C2 -3U61 DPA44_BPT4 B:[38-321] ----------------------------------FKSITSKGKIPHIILHSPSPGTGKTTVAKALCHD----------------VN-----------------------------------------------------------ADMMFVNGS------D-----C---K---IDFVRG-PLTNFASA------ASF---------------DG-RQ-KVIVIDEFDRSGL-------AESQRHLRSFMEA-YSS-NCSIIITAN--N------IDGIIKPLQSRCR---VITFGQPTD--EDKIEMMKQMIRRLTEICK-----H-------EGIAIA-DMKVVAALVKKNFPDFRKTIGELDSYSSKGV------------LDA----------------IDDVLESLKN----KDVKQLRALAP-KYA------ADYSWFVGKLAEE------------------------------------IYSRVTPQSIIRMYEIVGENNQYHGI-AA--NTELHLAYLFIQLACEM--------
23 HHSearch 38.0510% -68 - C2 -3BOS ? A:[50-240] ------------------------------------------DGVQAIYLWGPVKSGRTHLIHAACAR----------------ANEL---------------------------------------E-----------------RRSFYIPLG------I-------------H----A-SISTALL--------EG---------------LE-QF-DLICIDDVDAVAGHP------LWEEAIFDLYNRVAEQKRGSLIVSASA-SPME---AGFVLPDLVSRMHWGLTYQLQPMMD--DEKLAALQRR-------AA-----M-------RGLQLP-E-DVGRFLLNRMARDLRTLFDVLDRLDKASMVH--Q----RKLTIPFVKEML------------------------------------------------------------------------------------------------------------------------------------------------------