@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu26550: (2016-07-11 )
MMEQGKDCREVVTQLAASRNAIDRAMGLIVSTNLEHCVRESLEKGEDTQNLVKEAVDLLVKSR
Atome Classification :
(20 SA)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.....-....10........20.---.......30...-.....40.....-.----..-50........60..----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MMEQG-
K
D
C
R
E
V
V
T
Q
L
A
AS
R
N
A
I
---
D
R
A
M
G
L
IVST
N
L
-
E
H
C
V
R
E
S
L
EKGE-
D
----
T
Q
-
N
L
V
K
E
A
V
D
L
L
VKSR----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
HHSearch
80.18
25%
-108
- C2 -
4ADZ
2
?
A:
[71-134]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
V
D
E
D
-
V
Y
C
I
D
I
L
T
Q
V
S
A
S
T
K
A
L
---
Q
S
F
A
L
Q
L
L
E
E
H
L
-
R
H
C
V
A
D
A
A
L
K
G
G
T
E
----
I
D
-
A
K
V
E
E
A
T
K
A
I
G
R
L
L
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
71.59
26%
-134
* C2 *
2HH7
1
CSOR_MYCTU
A:
[29-84]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
L
E
S
D
-
A
Y
C
V
D
V
M
K
Q
I
S
A
V
Q
S
S
L
---
E
R
A
N
R
V
M
L
H
N
H
L
-
E
T
C
F
S
T
A
V
L
D
G
H
-
G
-----
Q
-
A
A
I
E
E
L
I
D
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
7
HHSearch
71.58
28%
-173
- C2 -
3AAI
-
?
A:
[33-92]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
L
E
D
E
K
V
Y
C
V
D
V
L
K
Q
L
K
A
V
E
G
A
L
---
D
R
V
G
E
M
V
L
R
A
H
L
-
K
D
H
--------
D
------
V
E
-
E
I
V
E
E
L
M
E
A
L
K
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
68.26
23%
-68
- C2 -
4M1P
3
?
A:
[42-99]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
V
E
D
N
-
R
Y
C
I
D
I
L
V
Q
I
S
A
I
Q
A
A
L
---
R
Q
V
G
M
Q
L
L
E
R
H
A
-
N
H
C
V
A
K
A
I
R
E
G
S
-
G
----
E
Q
-
S
L
-
R
E
L
M
D
V
I
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
HHSearch
68.06
19%
-112
- C2 -
4M1P
3
?
A:
[42-103]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
V
E
D
N
-
R
Y
C
I
D
I
L
V
Q
I
S
A
I
Q
A
A
L
---
R
Q
V
G
M
Q
L
L
E
R
H
A
-
N
H
C
V
A
K
A
I
R
E
G
S
------
G
E
-
Q
S
L
R
E
L
M
D
V
I
K
Q
F
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
67.98
28%
-172
- C2 -
4UIG
1
?
A:
[71-115]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
V
D
E
D
-
V
Y
C
I
D
I
L
T
Q
V
S
A
S
T
K
A
L
---
Q
S
F
A
L
Q
L
L
E
E
H
L
-
R
H
C
V
A
D
A
A
L
K
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
67.85
28%
-175
- C2 -
4ADZ
2
?
A:
[71-115]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
V
D
E
D
-
V
Y
C
I
D
I
L
T
Q
V
S
A
S
T
K
A
L
---
Q
S
F
A
L
Q
L
L
E
E
H
L
-
R
H
C
V
A
D
A
A
L
K
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
Fugue
67.76
32%
1
- C- -
4MBQ
-
?
A:
[871-919]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
E
A
A
T
K
L
D
L
A
R
A
Y
I
---
D
M
G
----
D
S
E
G
A
-
R
D
I
L
D
E
V
L
A
E
G
N
-
D
----
S
Q
-
Q
--
A
E
A
R
E
L
L
E
R
L
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
HHSearch
66.19
25%
-151
- C2 -
2HH7
1
CSOR_MYCTU
A:
[29-88]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
L
E
S
D
-
A
Y
C
V
D
V
M
K
Q
I
S
A
V
Q
S
S
L
---
E
R
A
N
R
V
M
L
H
N
H
L
-
E
T
C
F
S
T
A
V
L
D
G
H
------
G
Q
-
A
A
I
E
E
L
I
D
A
V
K
F
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
Fugue
56.04
19%
7
- C2 -
4KBL
6
ARI1_HUMAN
A:
[101-554]
Y
R
Y
E
V
L
T
A
E
Q
I
L
Q
H
M
V
E
C
I
R
E
V
NEVIQNP
A
T
I
T
R
I
L
L
S
H
F
NWD
K
E
K
L
M
E
R
Y
F
D
GNMPCQICYLNYPNSY
F
T
G
L
ECG
H
K
F
C
M
Q
C
W
S
E
Y
L
T
T
K
I
MEEGMGQTISCPAHGCD
I
L
V
D
D
N
T
V
M
R
L
ITDS
K
V
K
L
K
Y
Q
H
L
I
T
N
S
F
V
E
C
NRLLKWCPAPDCH
H
V
V
K
V
QYPDAKPVRCKCG
R
Q
F
C
FNCGENWHDPVK
C
K
W
L
K
K
W
I
K
K
CIAAN
T
K
E
C
PKCH
V
T
I
E
K
DGGCNH
M
V
C
R
N
QNCK
A
E
F
C
WVCLGPWEPHGS
A
W
Y
N
C
-
N
R
Y
N
R
S
R
A
A
L
Q
R
Y
L
F
Y
C
---
N
R
Y
M
N
H
M
Q
S
L
R
F
-
E
H
K
L
Y
A
Q
V
K
Q
K
M
-
E
WI--
E
V
-
Q
F
L
K
K
A
V
D
V
L
C
Q
C
R
A
T
L
M
Y
T
Y
V
F
A
F
Y
LKKN
N
Q
S
I
I
F
E
N
N
Q
A
D
L
E
N
A
T
E
V
L
S
G
Y
L
E
R
D
I
S
Q
D
SLQD
I
K
Q
K
V
Q
D
K
Y
R
Y
C
E
S
R
R
R
V
L
L
Q
H
V
H
E
G
YEKDLW-----------------------------------------------------------------------------------------------------------------------------
24
Fugue
55.14
20%
122
- C- -
4GA2
-
RBP2_PANTR
A:
[2-145]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RRS
K
A
D
V
E
R
Y
I
A
S
V
Q
G
S
TPS
P
R
Q
K
S
I
K
G
F
Y
F
A
K
L
Y
Y
E
A
KE
Y
D
L
A
K
K
Y
I
C
T
Y
I
N
V
Q
E
R
D
-
P
K
A
H
R
F
L
G
L
L
Y
E
L
E
E
N
------------
T
D
K
A
-
V
E
C
Y
R
R
S
V
E
L
N
P
-
T
----
Q
K
-
D
L
V
L
K
I
A
E
L
L
C
K
N
D
VTDG
R
A
K
Y
W
V
E
R
A
A
K
L
F
PGS
P
A
V
Y
K
L
K
E
Q
L
L
D
C
EGED---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
Fugue
51.50
20%
127
- C2 -
2HH7
1
CSOR_MYCTU
A:
[4-88]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ELT
A
K
K
R
A
A
L
N
R
L
K
T
V
R
G
H
L
D
G
I
V
R
M
L
E
S
D
-
A
Y
C
V
D
V
M
K
Q
I
S
A
V
Q
S
S
L
---
E
R
A
N
R
V
M
L
H
N
H
L
-
E
T
C
F
S
T
A
V
L
D
G
H
-
G
----
Q
A
-
A
I
E
E
L
I
D
A
V
K
F
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
Fugue
49.54
18%
85
- C2 -
3FVW
-
?
A:
[3-184]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------K
R
I
L
F
I
V
GSFSEGS
F
N
R
Q
L
A
K
K
A
E
T
I
I
GDR
A
Q
V
S
Y
L
S
YDRVP
F
F
N
Q
D
-
L
E
-
T
S
V
H
P
E
V
A
H
A
R
E
E
V
---
Q
E
A
D
A
I
W
I
F
S
P
----------
V
Y
N
Y
-
A
----
I
P
-
G
P
V
K
N
L
L
D
W
L
S
R
S
L
DLSDPTGPSVLQD
K
I
V
T
V
S
S
V
A
N
G
AEVF
E
D
Y
R
S
L
L
PFIRMHLVDQ
L
T
G
V
P
I
N
S
E
A
W
S
TG
I
L
K
V
S
A
E
K
L
A
E
L
S
A
Q
A
D
A
L
L
S
A
I
E
N----------------------------------------------------------------------------------------------------------------------------
17
HHSearch
45.69
23%
-291
- C2 -
3D24
-
PRGC1_HUMAN
B:
[8-19]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
P
C
S
E
L
L
K
Y
L
T
T
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
Fugue
45.04
16%
44
- C2 -
4PU7
-
HIPB_SHEON
A:
[17-87]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LET
I
M
A
S
P
-
L
N
Q
Q
S
L
G
L
L
I
K
E
R
R
K
S
A
ALT
Q
D
V
A
A
M
L
C
G
V
T
K
-
K
T
L
I
R
--
V
E
K
G
E
-
D
VYIS
T
V
-
F
K
I
L
D
G
L
G
I
D
I
V
S
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
HHSearch
41.54
6%
-296
- C2 -
1OMZ
1
EXTL2_MOUSE
A:
[201-229]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
I
D
E
T
-
Q
N
C
D
D
I
A
M
N
F
L
V
T
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
HHSearch
40.01
15%
-149
- C2 -
2MHW
-
A:
[7-26]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
L
S
A
G
K
A
A
L
---
K
G
L
A
K
V
L
A
E
K
Y
A
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19
Fugue
39.30
23%
78
- C2 -
3CSV
15
?
A:
[4-333]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------S
R
E
D
E
I
R
D
F
L
A
T
H
GYAD
W
N
R
T
PR
Y
Q
R
L
R
S
PTG
A
K
A
V
L
M
D
W
S
PEEGGDT
Q
P
F
V
D
L
A
Q
Y
L
R
N
L
D
---------
I
S
A
P
E
I
Y
A
E
---
E
H
A
R
G
L
L
L
I
E
D
L
G
D
A
L
F
T
E
V
I
N
N
D
P
-
A
----
Q
E
M
P
L
Y
R
A
A
V
D
L
L
I
H
L
H
D
AQTPELARLD
P
E
T
L
S
E
M
T
RLAFSEYRYAILGDAA
E
D
N
R
K
R
F
E
H
R
F
A
Q
I
L
S
A
Q
LEGDMVFVHRDFHAQNLLWLPEREGLAR
V
G
V
I
DFQD
A
K
L
G
H
RA
Y
D
L
V
S
L
L
Q
DARRDVP
A
Q
V
E
A
Q
M
I
D
H
Y
I
Q
A
T
GVD
E
S
H
F
R
S
A
Y
A
V
I
A
V
Q
R
N
M
R
I
L
G
I
F
A
R
L
S
Q
RFGKR
H
Y
I
E
F
V
P
R
V
W
A
H
F
E
R
G
L
A
HPALASA
A
E
E
I
L
N
A
L
PAPA
P
E
V
L
E
R
L
R
A
12
HHSearch
36.57
14%
-276
- C2 -
2MRE
1
B:
[19-32]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
S
H
I
N
K
H
L
-
D
S
C
L
S
R
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
Fugue
35.07
14%
74
- C1 -
3H05
1
?
B:
[1-177]
-------------------------------------------------------------------------------------------------------------------------------------------------------------MK
K
I
A
I
F
G
S
AFNPPS
L
G
H
K
S
V
I
E
S
L
SHFD
L
V
L
L
E
P
S
INMLD
Y
P
I
R
C
K
L
V
D
A
F
I
K
D
M
GLSN
V
Q
R
S
D
L
E
Q
A
L
YVT
T
Y
A
L
L
E
K
I
Q
E
I
Y
PT
A
D
I
T
F
V
I
G
-
P
D
N
F
F
K
F
A
K
F
Y
K
A
E
E
I
T
---
E
R
W
T
V
M
A
C
P
E
K
V
-
S
T
D
I
R
N
A
L
I
E
G
K
-
D
----
I
S
-
T
Y
T
T
P
T
V
S
E
L
L
L
N
E
GLYRETLSGK------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------