@TOME V2.3
(Nov 2016)

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3D Common Core:

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Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : bsu32240: (2016-07-23 )
MNEADMLFSVTVPGSTANLGPGFDSVGMALSRYLKLTVFESDKWSFEAETETVAGIPAGTDNLIYQVAKRTADLYGKEMPPVHVKVWSDIPLARGLGSSAAAIVAAIELADELCGLKLSEADKLHLASLEEGHPDNAGASLVGGLVIGLHEDDETQMIRVPNADIDVVVVIPFYEVLTRDARDVLPKEFPYADAVKASAVSNILIAAIMSKDWPLVGKIMKKDMFHQPYRAMLVPELSKVEHVAEMKGAYGTALSGAGPTILVMTEKGKGEELKEQLALHFPHCEVDALTVPKEGSIIERNPLYQVKSV

Atome Classification :

(20 SA) .........10........20----.....-....30------.--...------...-.40-.-.......50.----..-....--.-.-60-........70....--....80........90........100.......110.......120-.......130----.------.--------.......140.---....--..150.......160.-..---.....170-.......180...-----------..--...---------190--------........200.......210.......220.......230.---........240.....------..250......--.260.-.......-270.......280---.......290.......300.......--------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MNEADMLFSVTVPGSTANLG-----PGFDS-VGMALS------R--YLK------LTV-FES-D-KWSFEAET-E----TV-AGIP--A-G-TD-NLIYQVAKRTADLY--GKEMPPVHVKVWSDIPLARGLGSSAAAIVAAIELADELCGLKLSEAD-KLHLASLE------E------G--------HPDNAGASLVG---GLVI--GLHEDDETQMIRVP-N-AD---IDVVVVIP-FYEVLTRD-ARDV-----------LP--KEF---------P-Y--------ADAVKASAVSNILIAAIMSKDWPLVGKIMKKDMFHQPYR--A---MLVPELSKVEHVAEMK------GAYGTALSGAG--PTI-L-VMTEKGK-GEELKEQLALHFP---HCEVDALTVPKEGSIIERNPLYQVKSV--------------
1 PsiBlast_PDB 79.5041% -53 - C1 -3HUL KHSE_LISMO A:[2-284] ------SLRIRVPATTANLG-----PGFDS-CGLALT------L--YLT------LDIGAEA-D-SWYIEHNI-G-------GGIP--H-D-ET-NVIIETALNLA------PNLTPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLAELNLSKEE-KVRIAAEI------E------G--------HPDNVAPAVLG---NWVV--GAKLDGEDFYVRHL-F-P----CALIAFIP-KAELL--------------------P--DTL---------P-F--------KEAVQASSIANVMIAAILRNDMTLAGEMMERDLW-------S---QLVPHLAQIRDVAKNQ------GAYAACLSGAG--PTV-L-VFAPRNL-ANKL--QTSLQTL---EIDADVLLLDVEGS---------------------------
29 HHSearch 77.9941% -43 - C1 -3HUL KHSE_LISMO A:[2-292] ------SLRIRVPATTANLG-----PGFDS-CGLALT------L--YLT------LDI-GAE-ADSWYIEHNI-G-------GGIP--H-D-ET-NVIIETALNLAPN------LTPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLAELNLSKEE-KVRIAAEI------E------G--------HPDNVAPAVLG---NWVV--GAKLDGE-DFYVRH-LFP----CALIAFIP-KAELL--------------------P--DTL---------P-F--------KEAVQASSIANVMIAAILRNDMTLAGEMMERDLW-------S---QLVPHLAQIRDVAKNQ------GAYAACLSGAG--PTV-L-VFAPRNL-ANKLQTSLQTLEI---DADVLLLDVEGSGAEVFREG---------------------
21 PsiBlast_CBE 77.8441% -42 - C1 -3HUL KHSE_LISMO B:[2-284] ------SLRIRVPATTANLG-----PGFDS-CGLALT------L--YLT------LDIGAEA-D-SWYIEHNI------------P--H-D-ET-NVIIETALNLA------PNLTPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLAELNLSKEE-KVRIAAEI------E------G--------HPDNVAPAVLG---NWVV--GAKLDGEDFYVRHL-F-PD---CALIAFIP-KAELL--------------------P--DTL---------P-F--------KEAVQASSIANVMIAAILRNDMTLAGEMMERDLW--------------PHLAQIRDVAKNQ------GAYAACLSGAG--PTV-L-VFAPRNL-ANKL--QTSLQTL---EIDADVLLLDVEGS---------------------------
31 HHSearch 70.3827% 2 * C1 *4RPF KHSE_YERPN A:[2-309] ------MVKIYAPASIGNVS-----VGFDV-LGAAVSPIDGTLL--GDC------VSV-TAA-E-RFSLHNEG-R----FV-SKLP--DDP-KQ-NIVYQCWERFCQEM--GK-EIPVAMVLEKNMPIGSGLGSSACSVVAGLMAMNEFCGQPLDKVT-LLGMMGEL------E------GRVSGSI--HFDNVAPCYLG---GMQL--ILEQEGY-ISQDVP-GFSD---WLWVMAYP-GIKVSTAE-ARAI-----------LP--AQY---------R-R--------QDCITHGRNLAGFIHACHTQQPDLAAKMMKDV-IAEPYR--T---QLLPGFAAARQAAQDI------GALACGISGSG--PTL-F-AVCNDQATAQRMAGWLQNHYLQNDEGFVHICRLDTAGARLL------------------------
32 HHSearch 70.3327% 13 - C1 -1H72 KHSE_METJA C:[1-295] -----MKVRVKAPCTSANLG-----VGFDV-FGLCLKE-----P--YDV------IEV-EAIDDKEIIIEVDD-K--------NIPT-D-P-DK-NVAGIVAKKMIDDF--NI-GKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLK-LVDYASYG------ELASSGAK--------HADNVAPAIFG---GFTM--VTNYEP-LEVLHIP-IDFK---LDILIAIP-NISINTKE-AREI-----------LP--KAV---------G-L--------KDLVNNVGKACGMVYALYNKDKSLFGRYMM-S-DKVIEPVRG---KLIPNYFKIKEEVKD-------KVYGITISGSG--PSI-I-AFPKEEF-IDEVENILRDY-----YENTIRTEVG-KGVEV-------------------------
55 Fugue 69.7226% -12 - C1 -1H72 KHSE_METJA C:[1-296] -----MKVRVKAPCTSANLG-----VGFD-VFGLCLK-------EPYDV------IEV-EAI-D-DKEIIIEV-D----DK-NIPT--D-P-DK-NVAGIVAKKMIDDF--N-IGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLK-LVDYASYGELASSGA------K--------HADNVAPAIFG---GFTMVTNY---EPLEVLHIP-I---DFKLDILIAIPN-ISINTKE-AREI-------------LPKAV---------G-L--------KDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVR--G---K------LIPNYFKIKEEVKDK-VYGITISGSG--PSI-I-AFPKEEF-IDEVENILRDYYE------------------------------NTIRTEVGKGVEVV
54 Fugue 69.1326% 8 - C1 -1FWK KHSE_METJA A:[1-296] -----MKVRVKAPCTSANLG-----VGFDV-FGLCLKE-----P--YDV------IEV-EAI-D-DKEIIIEV-D----DK-NIPT--D-P-DK-NVAGIVAKKMIDDF--NIG-KGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLK-LVDYASYG------ELASSGAK--------HADNVAPAIFG---GFTM--VTNYEPLEVLHIPI-D-FK---LDILIAIP-NISINTKE-AREI-----------LP--KAV---------G-L--------KDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVR--G---KLIPNYFKIKEEVK-D------KVYGITISGSG--PSI-I-AFPKEEF-IDEVENILRDYYE----------------NTIRTEVGKGVEVV--------------
52 Fugue 68.6925% 5 - C1 -1H72 KHSE_METJA C:[1-296] -----MKVRVKAPCTSANLG-----VGFDV-FGLCLK------EP-YDV------IEV-EAI-D-DKEIIIEV-D----DK-NIPT--D-P-DK-NVAGIVAKKMIDDF--NIG-KGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLK-LVDYASYG------ELASSGAK--------HADNVAPAIFG---GFTM--VTNYEPLEVLHIPI-D-FK---LDILIAIP-NISINTKE-AREI-----------LP--KAV---------G-L--------KDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVR--G---KLIPNYFKIKEEVK-D------KVYGITISGSG--PSI-I-AFPKEEF-IDEVENILRDYYE---NTIRTEVG---KGVEVV------------------------
6 PsiBlast_PDB 68.2827% 23 - C1 -1H72 KHSE_METJA C:[1-283] -----MKVRVKAPCTSANLG-----VGFDV-FGLCLK------EP-YDV------IEV-EAI-D-DKEIIIEV-D----D--KNIP--T-D-PDKNVAGIVAKKMIDDFNIGK---GVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLK-LVDYASYG------ELASSGAK--------HADNVAPAIFG---GFTM---VTNYEPLEVLHIPID-FK---LDILIAIP-NISINTKE-AREI-----------LP--KAV---------G-L--------KDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVR--G---KLIPNYFKIKEEVKDK-------VYGITISGSG--PSI-I-AFPKEEF-IDEVENILRDYYE---N----------------------------------------
8 PsiBlast_PDB 68.1927% 20 - C1 -1H73 KHSE_METJA A:[1-283] -----MKVRVKAPCTSANLG-----VGFDV-FGLCLK------EP-YDV------IEV-EAI-D-DKEIIIEV-D----D--KNIP--T-D-PDKNVAGIVAKKMIDDFNIGK---GVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLK-LVDYASYG------ELASSGAK--------HADNVAPAIFG---GFTM---VTNYEPLEVLHIPID-FK---LDILIAIP-NISINTKE-AREI-----------LP--KAV---------G-L--------KDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVR--G---KLIPNYFKIKEEVKDK-------VYGITISGSG--PSI-I-AFPKEEF-IDEVENILRDYYE---N----------------------------------------
2 PsiBlast_PDB 67.4526% -0 - C1 -4RPF KHSE_YERPN A:[2-288] ------MVKIYAPASIGNVS-----VGFDV-LGAAVS------P--IDGTLLGDCVSV-TAA-E-RFSLHNEG-R----FV-SKLP--D-DPKQ-NIVYQCWERFCQEM--GKEIP-VAMVLEKNMPIGSGLGSSACSVVAGLMAMNEFCGQPLDKVT-LLGMMGEL------E------GRVSGSI--HFDNVAPCYLG---GMQL--ILEQEGYISQDVPG-F-SD---WLWVMAYP-GIKVSTAE-ARAI-----------LP--AQY---------R-R--------QDCITHGRNLAGFIHACHTQQPDLAAKMMK-DVIAEPYR--T---QLLPGFAAARQAAQDI------GALACGISGSG--PTL-FAVCNDQAT-AQRMAGWLQNHY---------------------------------------------
5 PsiBlast_PDB 67.3827% 19 - C1 -1FWL - KHSE_METJA A:[5-287] -----MKVRVKAPCTSANLG-----VGFDV-FGLCLK------EP-YDV------IEV-EAI-D-DKEIIIEV-D----D--KNIP--T-D-PDKNVAGIVAKKMIDDFNIGK---GVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLK-LVDYASYG------ELASSGAK--------HADNVAPAIFG---GFTM---VTNYEPLEVLHIPID-FK---LDILIAIP-NISINTKE-AREI-----------LP--KAV---------G-L--------KDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVR--G---KLIPNYFKIKEEVKDK-------VYGITISGSG--PSI-I-AFPKEEF-IDEVENILRDYYE---N----------------------------------------
7 PsiBlast_PDB 67.3527% 19 - C1 -1H74 KHSE_METJA A:[1-283] -----MKVRVKAPCTSANLG-----VGFDV-FGLCLK------EP-YDV------IEV-EAI-D-DKEIIIEV-D----D--KNIP--T-D-PDKNVAGIVAKKMIDDFNIGK---GVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLK-LVDYASYG------ELASSGAK--------HADNVAPAIFG---GFTM---VTNYEPLEVLHIPID-FK---LDILIAIP-NISINTKE-AREI-----------LP--KAV---------G-L--------KDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVR--G---KLIPNYFKIKEEVKDK-------VYGITISGSG--PSI-I-AFPKEEF-IDEVENILRDYYE---N----------------------------------------
53 Fugue 67.2625% 7 - C1 -1H74 KHSE_METJA A:[1-296] -----MKVRVKAPCTSANLG-----VGFDV-FGLCLKE-----P--YDV------IEV-EAI-D-DKEIIIEV-D----DK-NIPT--D-P-DK-NVAGIVAKKMIDDF--NIG-KGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLK-LVDYASYG------E------LASSGAK--HADNVAPAIFG---GFTM--VTNYEPLEVLHIPI-D-FK---LDILIAIP-NISINTKE-AREI-----------LP--KAV---------G-L--------KDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVR--G---KLIPNYFKIKEEVKDK-------VYGITISGSG--PSI-I-AFPKEEF-IDEVENILRDYYE---NTIRTE---VGKGVEVV------------------------
4 PsiBlast_PDB 67.1227% 22 - C1 -1FWK KHSE_METJA A:[1-283] -----MKVRVKAPCTSANLG-----VGFDV-FGLCLK------EP-YDV------IEV-EAI-D-DKEIIIEV-D----D--KNIP--T-D-PDKNVAGIVAKKMIDDFNIGK---GVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLK-LVDYASYG------ELASSGAK--------HADNVAPAIFG---GFTM---VTNYEPLEVLHIPID-FK---LDILIAIP-NISINTKE-AREI-----------LP--KAV---------G-L--------KDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVR--G---KLIPNYFKIKEEVKDK-------VYGITISGSG--PSI-I-AFPKEEF-IDEVENILRDYYE---N----------------------------------------
16 PsiBlast_PDB 63.0223% -67 - C1 -3PYG ISPE_MYCTU A:[37-279] ----------------------------------AVS------L--VDE------VTV-RNA-D-VLSLELVG-E----GA-DQLP--T-D-ER-NLAWQAAELMAEHV--GRA-PDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLG------S------D--------VP----FALHG---GTAL--GTGRGEELATVLSR-N-T----FHWVLAFA-DSGLLTSA-VYNE-----------LD--RLR---------E-V--------GDPPRLGEPGPVL-AALAAGDPDQLAPLLGNEM--QAAA--V---SLDPALARALRAGVEA------GALAGIVSGSG--PTCAF-LCTSASS-AIDVGAQLS------------------------------------------------
15 PsiBlast_PDB 62.4523% -64 - C1 -3PYF ISPE_MYCTU A:[37-279] ----------------------------------AVS------L--VDE------VTV-RNA-D-VLSLELVG-E----GA-DQLP--T-D-ER-NLAWQAAELMAEHV--GRA-PDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLG------S------D--------VP----FALHG---GTAL--GTGRGEELATVLSR-N-T----FHWVLAFA-DSGLLTSA-VYNE-----------LD--RLR---------E-V--------GDPPRLGEPGPVL-AALAAGDPDQLAPLLGNEM--QAAA--V---SLDPALARALRAGVEA------GALAGIVSGSG--PTCAF-LCTSASS-AIDVGAQLS------------------------------------------------
14 PsiBlast_PDB 61.1523% -67 - C1 -3PYE ISPE_MYCTU A:[37-279] ----------------------------------AVS------L--VDE------VTV-RNA-D-VLSLELVG-E----GA-DQLP--T-D-ER-NLAWQAAELMAEHV--GRA-PDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLG------S------D--------VP----FALHG---GTAL--GTGRGEELATVLSR-N-T----FHWVLAFA-DSGLLTSA-VYNE-----------LD--RLR---------E-V--------GDPPRLGEPGPVL-AALAAGDPDQLAPLLGNEM--QAAA--V---SLDPALARALRAGVEA------GALAGIVSGSG--PTCAF-LCTSASS-AIDVGAQLS------------------------------------------------
13 PsiBlast_PDB 60.8523% -66 - C1 -3PYD ISPE_MYCTU A:[37-279] ----------------------------------AVS------L--VDE------VTV-RNA-D-VLSLELVG-E----GA-DQLP--T-D-ER-NLAWQAAELMAEHV--GRA-PDVSIMIDKSIPVAGGMAGGSADAAAVLVAMNSLWELNVPRRDLRMLAARLG------S------D--------VP----FALHG---GTAL--GTGRGEELATVLSR-N-T----FHWVLAFA-DSGLLTSA-VYNE-----------LD--RLR---------E-V--------GDPPRLGEPGPVL-AALAAGDPDQLAPLLGNEM--QAAA--V---SLDPALARALRAGVEA------GALAGIVSGSG--PTCAF-LCTSASS-AIDVGAQLS------------------------------------------------
48 HHSearch 60.7122% 7 - C1 -2CZ9 GAL1_PYRHO A:[1-327] ------MIKVKSPGRVNLIGEHTDYTYGYV-MPMAIN------L--YTK------IEA-EKH-G-EVILYSEHFGEERKFSLNDLRKEN-S-WI-DYVKGIFWVLKE-S--DYEVGGIKGRVSGNLPLGAGLSSSASFEVGILETLDKLYNLKLDSLS-KVLLAKKA------E------NEFVGVPCGILDQF-AVVFGREGNVIF--LDTHT--LDYEYIP-FPKD---VSILVFYT-GVR----SSEYAERKHIAEESLKILG--KGSSKEVREGELSKLPPLHRKFFGYIVRENARVLEVRDALKEGNVEEVGKIL-TT-AHWDLA--KNYEVSCKELDFFVERALKL------GAYGARLTGAGFGGSA-I-ALVDKED-AETIGEEILR-----------------------------------------------