@TOME V2.3
(Nov 2016)

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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : bsu35770: (2016-07-30 )
MRKKELFDFTNITPKLFTELRVADKTVLQSFNFDEKNHQIYTTQVASGLGKDNTQSYRITRLSLEGLQLDSMLLKHGGHGTNIGIENRNGTIYIWSLYDKPNETDKSELVCFPYKAGATLDENSKELQRFSNMPFDHRVTPALDMKNRQLAIRQYDTKNNNNKQWVTIFNLDDAIANKNNPLYTINIPDELHYLQGFFLDDGYLYWYTGDTNSKSYPNLITVFDSDNKIVLQKEITVGKDLSTRYENNFREPEGICMYTNPETGAKSLMVGITSGKEGNRISRIYAYHSYENFMNHVPMLRSPLLKTVGHQDTPPERFQPFIQTFILEYNAQNKKWMVPTSGYLPSYTSNLVRNITINADGNLQVTLNERYISLLHQSIEGDFRLKQKDIRMGSWYFAGGEKSNVLEIGFMKGSTKIRPDDAAISNASRMSIFMIVADKIEV

Atome Classification :

(20 SA) -------------------------------------.........-10..--..----..-..20........30-----........--40...-....-.50........60........70........--80..--...-.---------..90........100..------.....110......--..120........130---........-.140------.........150..---.-.....160......-.----170------------------..-----.......180..----..-----..-.190.......200...-.--.....210..---.....220.---.--...--.------------.230......------.240----.........250.......260----........270-----.-----....-----....-280.....-------.-.290........300--.-------......310.......320------------------........330-----.-...-....-340.-------------....---..-350.----------...-...360-.......370.....-------------..380.---------......390-----.-.......--400-.......-..410.....---------...420.......430.......440-----------------------------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) -------------------------------------MRKKELFDF-TNIT--PK----LF-TELRVADKTVLQSF-----NFDEKNHQ--IYTTQ-VASG-LGKDNTQSYRITRLSLEGLQLDSMLLKHGGH--GTNI--GIE-N---------RNGTIYIWSLYDKPNET------DKSELVC-FPYKAG--ATL-DENSKELQRF-----SNMPFDHR-VT--------PALDMKNRQLA-IR---Q-YDTKNNNNKQWVTI-F----N--------------------LD-----DAIANKNNPLYT----IN-----IP-DELHYLQGFFLD--DGY-L--YWYTGDTNSK---SYPNLITVF---D--SDN--K------------IVLQKEITVG------KD------LSTRYENNFREPEGICMYTNP-----ETGAKSLMV-------G-----ITSG-----KEGN-RISRIYAY-------H-SYE-NFMNHVPMLRS--P-------LLKTVGHQDTPPERFQPF-------------------IQTFILEYNA------Q-NKK-WMVP-TSGY-------------LPSY---TS-NLVR----------NIT-INADGN-LQVTLNERYISLLHQ-------------SIEGDF---------RLKQKDIR------M-GSWYFAG--G---EKSNVLE-IGFM-KGSTK---------IRPDDAAISNASRMSIFMIVADKIEV-----------------------------
26 Fugue 60.1015% -31 * C8 *4KPP ? A:[2-396] -------------------------------------DFTKEKFQL-LAIS--SL----TL-PWLISLA------F-----NYHHP-----------------------ALTQTLLSGLAVVSASFLISWAAE--TAEM--DV-------------------------PRSF------SLAIVAL-LAVLPE--YAV-DGYFAWKAGS-----VGGEYVHY-AT--------ANMTGANRLLI-GI--------------GWSLV-A----F--------------------IA-----FRTLKSK----E----VE-----LD-DGIR-LEIFFLF--LAT-L--YAFTLPLKGH---ISPFDALVF---V--SLY--A------------IYIYLSTKAE------REEVEVGGVPAYLCSLKTETRRLSVVVLF-----LFAGFTILM-------S-----VEAF-----SEGLLETARIAGI-------D-EFL-AVQWIAPLASE--S-------PELIVAIYFVRRFRVSAS-------------------MNALISSKVN------Q-WT--LLIG-TIAI-------------IYSI---SA-FKLQ----------SLP-LDARQS-EEVLLT-AAQSLFAV-------------AILLDL---------KISWKEASALFLLFI-VQLLFPG--V---EVRYIIS-AIYI-ILSLP---------ILFAKRKEIVESFRTVKRLISLE--------------------------------
31 Fugue 59.5512% -2 * C9 *1RI6 - 6PGL_ECOLI A:[2-334] ------------------------------------------------------------------------------------SLKQT--VYIAS-PESQ--------QIHVWNLNHEGALTLTQVVDVPGQ--VQPM--VVS-P---------DKRYLYVGV-------R------PEFRVLA-YRI---------APDDGALTFA-----AESALPGSLTH--------ISTDHQGQFVF-VG---S-YNAG------NVSV-T----R--------------------LE-----D-----GLPVGV----VD-----VV-EGLDGCHSANIS--PDN-R--TLWVPALKQ-------DRICLF---TVSDDG--H------------LVAQDPAEVT------TV------EGAGPRHMVFHPNEQYAYCVN-----ELNSSVDVW-------E-----LKD-----------------------------------------PH--G-------NIECVQTLDMMPENFSDT-------------------RWAADIHITP------D-GRH-LYAC-DRT----------------------A-SLIT----------VFS-VSEDGS-VLSKEGFQPTETQPR-------------GFNVDH---------S---------------GKYLIAA--G---QKSHHIS-VYEI-VGEQG---------LLHEKGRYAVGQGPMWVVVNAHE--------------------------------
24 Fugue 57.6415% 22 - C9 -3BWS ? A:[27-433] ---------------------------------------GTEIVKF-S-IH--PY----KG-TVIRLGEEIL--PF-----KVLEMDKN--IALVEMAIPV-YKDEKEIELKLSS---PGFQNSSYRIRKPEELNEKLI--ALD-K---------EGITHRFISRFKTGFQPKSVRFIDNTRLAIPLLEDEGM-DVL-DINSGQTVRL-----S-------------------PPEKYKKKLG-FV---E-TISIPEHNELWVSQMQ----A--------------------NA-----VHVFDLKTLAYK----AT-----VD-LTGKWSKILLYD--PIR-D--LVYCSNWISE-------DISVI---D--RKT--K------------LEIRKTDKIG------------------------LPRGLLL---S-----KDGKELYIA-------Q-----FSAS-----NQES-GGGRLGIY-------SMDKE-KLIDTIG-----------------------------PPG-------------------NKRHIVSGNT------E-NKI-YVSDMCCSK-------------IEVYDLKEK-KVQK----------SIP-VFDKPNTIALSPDGKYLYVSCRG------------PNHPTE---------GYLKKGLV------L-GKVYVID--TTTDTVKEFWE-AGNQ-PTGLD---------VSPDNRYLVISDFLDHQIRVYRRDGF-----------------------------
21 HHSearch 57.2316% -54 - C9 -1NPE A:[36-217] ----------------------------------------------------------------------KVIIGL-----AFDCVDKV--VYWTD-ISEP----------SIGRASLHGGEPTTIIRQDLGS--PEGI--ALD-H---------LGRTIF-WTDSQ------------LDRIEV-AKMDGT--Q---------RRVL-----FDTGLVNP-RG--------IVTDPVRGNLY-WT-------DWNR-DNPKIET-S----H--------------------MD-----GTNRR---IL-------------AQ-DNLGLPNGLTFDAFSSQ-L--CWVDAGT---------HRAECL---N--PAQ--PG-----------RRKVL--E-----------------------GLQYPFAVTSY--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
19 HHSearch 54.2716% -71 - C9 -3SOV LRP6_HUMAN A:[79-239] ----------------------------------------------------------------------LSPDGL-----ACDWLGEK--LYWTD-SETN----------RIEVSNLDGSLRKVLFWQELDQ--PRAI--ALD-P---------SSGFMY-WTDWGE-----------VPKIER-AGMDGS--SR---------FII-----INSEIYWP-NG--------LTLDYEEQKLY-WA-------DAK---LNFIHK-S----N--------------------LD-----GTNRQ---AVV-------------K-GSLPHPFALTLF--EDI-L--YWTDWST---------HSILAC---N--KYT--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
29 Fugue 54.1316% 32 - C6 -5BP8 ? A:[6-520] ---------------------------------APREAEAAALLAA-TVAD--PW----GL-VAPSVYDTARLVSLAPWLDGHRERLGY--LAKEQ-NQDGSWGAPDGYGLVPTLSAVEALLTELARTDSGAP--HLSP--DDL-A---------AACADGLGALRDGLLAG------PVPDTIG-VEFVAP--SLL-ADINTRLAAL-----TEQAPGKL-GAWSGTTLTSPAPDLDGALLAGVR---EMTEQAPLPEKLWHTL-E----A--------------------VTRDGTRGARPHEGAPPHNGSVGCS-----PA-ATAAWLGAAPDP--AAP-G--VAYLRDVQARFGGPVPSITPIV---Y--FEQ--A------------WVLNSLAASGLRYEAPAA------LLDSLEAGLTD-EGIAAAPGL-----PSDSDDTAA-------V-----LFAL-----AQHG-RTHRPDSLM------HFRRD-GYFSCFGVERT--PSTSTNAHILEALGHHVTVRPDDAGR-------------------YGAEI-----------RMISD-WLLD-NQ---------------LPDG---SWMDKWH----------ASP-YYATAC-CALALAEFGGPSARA-------------AVDRAA---------AWALATQR------ADGSWGRWQ--G---TTEETAYMVQLLMRTRTP---------GSPGTVARSAARGCDALLAHDDPASYPGLWHDKDIYAPVTVIRAARLAALALGGA
16 HHSearch 53.6910% -78 - C9 -1IJQ - LDLR_HUMAN A:[453-615] ----------------------------------------------------------------------QAPDGL-----AVDWIHSN--IYWTD-SVLG----------TVSVADTKGVKRKTLFRENGSK--PRAI--VVD-P---------VHGFM-YWTDWGT-----------PAKIKK-GGLNGV--DI---------YSL-----VTENIQWP-NG--------ITLDLLSGRLY-WV-------DSK---LHSISS-I----D--------------------VN-----GGNRK---TILE----D-------E-KRLAHPFSLAVF--EDK-V--FWTDIIN---------EAIFSA---N--RLT--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 Fugue 53.5313% 50 * C7 *1IOK - CH60_PARDE A:[2-526] -------------------------------------AAKEVKFN--SDAR--DR----ML-KGVNILADAVKVTL-----GPKGRNVV--IDKSF-GAPR-ITKDGVSVAKEIELSDKFENMGAQMVREVAS--RTNDEAGDG-T---------TTATVLAQAIVREGLKA------VAAGMNP-MDLKRGIDVAT-AKVVEAIKSA-----ARPVNDSS---------------------E-VA---Q-VGTISANGESFIGQ-Q----I--------------------AE-----AMQRVGNEGVIT----VEENKG-ME-TEVEVVEGMQFD--RGY-LSPYFVTNADKMI---AELEDAYIL---L--HEK--KLSSLQPQKPLLIVAEDVEIAAV------KAPG----FGDRRKAMLQDIAILTGGIDM-----LGRAKKVSI-------NKDNTTIVDGAGEKAEIEA-RVSQIRQQIEETTSDY-DRE-KLQERVAKLAGGVA-------VIRVGGMTEIEVKERKDR-------------------VDDALNATRA------A-VQE-GIVV-GGGV-------------ALVQ---GA-KVLE----------GLSGANSDQD-AGIAIIRRALEAPMR-------------QIAENAGVDGAVVAGKVRESSDK------A-FGFNAQT--E---EYGDMFK-FGV----IDP---------AKVVRTALEDAASVAGLLITTEAMIAEKP--------------------------
14 HHSearch 52.5310% -76 - C9 -3M0C - LDLR_HUMAN C:[473-633] ------------------------------------------------------------------------PDGL-----AVDWIHSN--IYWTD-SVLG----------TVSVADTKGVKRKTLFRENGSK--PRAI--VVD-P---------VHGFM-YWTDWGT-----------PAKIKK-GGLNGV--DI---------YSL-----VTENIQWP-NG--------ITLDLLSGRLY-W-------VDSK---LHSISS-I----D--------------------VN-----GGNRK---TIL------E-----DE-KRLAHPFSLAVF--EDK-V--FWTDIIN---------EAIFSA---N--RLT--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28 Fugue 50.6012% 12 - C1 -3OGZ ? A:[3-610] NPSNSNLQALREELCTPGLDQGHLFEGWPETVDECNERQIALLTDL-YMFS--NMYPGGVA-QYIRNGHELLARES-----EEVDFAALEMPPLIF-EAPS-LHRRTAERTALENAGTAMLCKTVFVLVAGGL--GERL--GYS-SIKVSLPVETATNTTYLAYYLRWAQRV------GGKEVPF-VIMTSD--DTH-DRTLQLLRELQLEVPNLHVLKQG-QV--------FCFADSAAHLA-LDETGK-LLRKPHGHGDVHSL-I----YNATVAQPL------------VN-----DWLAAGYESIVF----IQDTNAGAT-ITIPISLALSAE--HSLDM--NFTCIPRVPK---EPIGLLCRTKKNS--GDP--W------------LVANVEYNVF------AE------VSRALGFSPFPGSVNTLVFKL-----SSYVDRLRESHGIVPEF-----INPK-----YSDE-TRRSFKKP-------A-RIE-SLMQDIALLFS--E-------DDYRVGGTVFERFSYQPVKNSLEEAAGLVAQGNGAYCAATGEAAFYE------L-QRR-RLKA-IGLP-------------LFYS---SQ-PEVTVAKDAFGVRLFPI-IVLDTV-CASSGSLDDLARVFPTPEKVHIDQHSTLIVEGRV---------IIE--SLE------L-YGALTIR--G---PTDSMAL-PHVV-RNAVVRNAGWSVHAILSLCSRLSEVDRIRGFVLKKTAMAVMDC--------------------------
13 HHSearch 49.8211% -71 - C9 -1N7D LDLR_HUMAN A:[455-615] ------------------------------------------------------------------------PDGL-----AVDWIHSN--IYWTD-SVLG----------TVSVADTKGVKRKTLFREQGSK--PRAI--VVD-P---------VHGFMY-WTDWGT-----------PAKIKK-GGLNGV--DI---------YSL-----VTENIQWP-NG--------ITLDLLSGRLY-WV-------DSK---LHSISS-I----D--------------------VN-----GGNRK---TIL------E-----DE-KRLAHPFSLAVF--EDK-V--FWTDIIN---------EAIFSA---N--RLT--G--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32 Fugue 48.8518% -36 - C8 -4O6M ? A:[29-370] -------------------------------------MRLAYVKNH-EIYG--EK----LLGLTLRERIEKTLQRA-----GFDVRFFD-----------E-LSLEEAEDYLIILEPVLILERDLLL-----E--GRKI--LVS-D---------GFTVGYFFG--------------------------------------GDFRT---------VFDG------------------NLQSS-IE---K-YLSLNNLESYEIWA-I----K--------------------LS-----N----------------------------------------------------DNLK---TAEKLLLSS---L--IDG--W------------IAREINRKVS------LR------ISRLLADTSVTPNQITVFSFF-----LSLVGSALF-------L-----LNSY-----LTTL-LAGVIIQL-------H-SIIDGCDGEIARLKF--M-------ESKYGAWLDGVLDRYSDF-------------------IIVFSITYVL------S-ASN------PVYW-------------IIGF---LA-AFAS----------LMI-AYTGDK-FVAAYMRTY-------------------SPEGFA---------IPITRDFR------L-LIIFACSVVN---LPSLALV-IIAL-LGNFE---------ALRRIVALRSY--------------------------------------------
30 Fugue 44.9114% 48 - C2 -4UUW ? A:[1-394] -------------------------------------MERAEILGVGTELLYGET----LD-TNTAEIARS-LKPY-----ALKVER-T--LRVAD-EVAP-LAREVEEAFARARLVVLS----------GGL--GPTP--DDV-T---------REAVALALGEPLELDEA------VLGEIEA-FFRARG--RAMPEANRKQAMRI-----PSATWLKN-PR--------G----TAPGWW-VR---K-------GGKDLVLL-PGPPPE--------------------WR-----PMWQEVLPRLGL----PR-----RP-YAERVLKTWGIG--ESE-I--VERLGPLFVR---EEEVEVGTY---P--KVHGVE------------VVVRGREDRV------AE------LAERIKKKLLKE---VWGEGE-----MTLAEAVKR-------R-----ME-------REGA-TLSTMESL-------T-G---------GLLGA--E-------ITRVPGASR--------F-------------------YLGGVVSYSV------G-AKARFGVP-QDLL-------------SRTV---SA-ETAR----------AMA-EAARSL-FGST-----YALATT-------------GVAGPD---------PLEGEPP---------GTVYVAL--A---GPT------GAE-VRRYR---------FPGDRETVRLRSVYAALALLVT---------------------------------
22 HHSearch 44.5815%-105 - C9 -3M0C - LDLR_HUMAN C:[514-588] ----------------------------------------------------------------------SKPRAI-----VVDPVHGF--MYWTD-WGTP---------AKIKKGGLNGVDIYSLVTENIQW--PNGI--TLD-L---------LSGRLY-WVDSK------------LHSISS-IDVN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25 Fugue 41.8211% 35 - C9 -2P9W MALF1_MALFU A:[1-334] -----------------------------------------ALPDQ-IDVK--VKN---LT-PEDTIYDRTRQVFY-----QSNLYKGR--IEVYN-PKTQ-----SHFNVVIDGASSNG--------DGEQQ--MSGL--SLLTH---------DNSKRLFAVMKNAKSFN------FADQSSH-GASSFH--SFN-LPLSENSKPV-----WSVNFEKV-QD--------EFEKKAGKRPF-GV---V-QSAQDRDGNSYVAF-A----L--------------------------------GMPAIAR----VS-----ADGKTVSTFAWESGN--GGQ-R--PGYSGITFDP---HSNKLIAFG---G--PRA--L------------TAFDVSKPYA------WP------EPVKINGDFGTLSGTEKIVTV-----PVGNESVLV-------G-----ARAP---------------------------------------------------------------------Y-------------------AISFRSWDNW------K-SAN-IKKT-KRSE-------------LQNS---GF-TAVA----------DYY-QGSEQG-LYAVSA--------------------------------------------------------FFDN--G---AHGG---------RSDYP---------LYKLDNSIQNFHHHHH---------------------------------------
15 HHSearch 41.7818%-105 - C9 -3P5B - L:[203-264] -----------------------------------------------------------------------KPRAI-----VVDPVHGF--MYWTD-WGTP---------AKIKKGGLNGVDIYSLVTENIQW--PNGI--TLD-L---------LSGRLY-WVD-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12 PsiBlast_PDB 39.7736%-151 - C3 -4QA8 LPRF_MYCBO A:[184-216] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------WIVD-TNAS-------------TPAP---AA-NLVR----------MVI-DKDQGN-VDITLS----------------------------------------------------------------------------------------------------------------------------------------------------
20 HHSearch 37.7617% -78 - C4 -4XDQ ? A:[31-94] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLFADEFDGPAGSPPD-PAK-WFIV-PERETIRNPVEWDKPYNMGRY---VT-D-QE----------HVF-HDGNGN-LVIRAT----------------------------------------------------------------------------------------------------------------------------------------------------
4 PsiBlast_PDB 31.4219% -40 - C10 -3AMU TIAS_ARCFU A:[20-164] --------------------------------------------------------------------------------------------------------------------------------------------------------------HMRVWVGID---DT------DSSRGMC-TTYLAV--LAM-ERVERELGKV-----IGFPRLIR-LN--------PTIP-----NG-AV---S-FLVEVDDVGELVDV-V----NEVIIEHAMLDDEKTNPGAVFVD-----EELAVKLKPFAD----KA-----IK-DVLQIDEALFVI--GKY-F--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 29.6225% 24 - C10 -3M5W SYW_CAMJE A:[136-268] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LLFDTR-IV--------PVGKDQIQHVE-IA---R--DIALKVNNEWGEI-F----T--------------------LP-----EARV-------------------------AVVVG---------------TDGAKMSK---SYQNTIDIF---S--SEK----------------TLKKQISSI------VT------DSTALEDP-KDHENCNIFKIAKLFLDESGQKELQI-------R-----YEKG-----GEGY-GHFKIY------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------