@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : bsu35940: (2016-07-30 )
MQIEMKDIHKTFGKNQVLSGVSFQLMPGEVHALMGENGAGKSTLMNILTGLHKADKGQISINGNETYFSNPKEAEQHGIAFIHQELNIWPEMTVLENLFIGKEISSKLGVLQTRKMKALAKEQFDKLSVSLSLDQEAGECSVGQQQMIEIAKALMTNAEVIIMDEPTAALTEREISKLFEVITALKKNGVSIVYISHRMEEIFAICDRITIMRDGKTVDTTNISETDFDEVVKKMVGRELTERYPKRTPSLGDKVFEVKNASVKGSFEDVSFYVRSGEIVGVSGLMGAGRTEMMRALFGVDRLDTGEIWIAGKKTAIKNPQEAVKKGLGFITENRKDEGLLLDTSIRENIALPNLSSFSPKGLIDHKREAEFVDLLIKRLTIKTASPETHARHLSGGNQQKVVIAKWIGIGPKVLILDEPTRGVDVGAKREIYTLMNELTERGVAIIMVSSELPEILGMSDRIIVVHEGRISGEIHAREATQERIMTLATGGR
Atome Classification :
(24 SA)
---------------------------------------------------------------------.........10..-.-------.-....20....-.------...30........40........50.....--...60--------...---.-----------.....--70.----.-......--80-.......-..90........100..----.---..-----------------..----110.----------...-----...120-....-------.--.--.130........140.......150.......160......---.170.......180.....-..190.......200.......210......-.-220.-...-...----------------------------------------230---------------.------------------------------------------.-------.-------.--.--------------------------------------------------------.---.---------.-----------------------------------------.--------240----.------------------.--.-----------------------------.----------------------------------------------------------..----------.-----.---.--------------------------------------------------------250.......260---.-------......270.....-----..280.......290.......300.......310...-....--320.......330..--------....------------------------------------------.--340.......350.......360-----------------------------.........370.......380.....-....390.......400.......410.......420.......430.......440.-.......450.......460.....-----.--.470.......480.......490.-----------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
---------------------------------------------------------------------M
Q
I
E
M
K
D
I
H
K
T
FG-K-------N-QVLSGV
S
F
Q
L-M------PG
E
V
H
A
LMGENGA
G
K
S
T
L
M
N
I
L
T
G
LHKADK--
G
Q
I
S
---------ING---N-----------ETYFS--N
P
K
----
E
-
A
E
Q
H
G
I
--
A
--
F
I
H
Q
E
LN-IWP
E
M
T
V
L
E
N
L
FI
G
K
E
I
----
S
---
S
K
-----------------L
G
----
V
L
Q
T
----------
R
K
M
-----
K
A
L
A
K
E
-
Q
F
D
K-------
L
--
S
--
V
S
-
L
S
LDQEAGECSV
G
Q
Q
Q
M
I
E
I
A
K
A
L
MTNA
E
V
I
I
MDEP
T
A
---
A
L
T
E
R
E
I
S
K
L
F
E
V
I
T
A
L
K
K-N
G
V
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I
V
Y
I
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H
R
M
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I
F
A
I
C
D
R
I
T
I
M
RDGKTV-D-TTNI-SET-
D
F
D
----------------------------------------
E
-----------------
V
------------------------------------------
V
-------
K
-------
K
--
M
--------------------------------------------------------
V
---
G
---------
R
-----------------------------------------
E
--------
L
------
T
------------------
E
--R-----------------------------Y----------------------------------------------------------PK----------R-----T---P--------------------------------------------------------SLGD
K
V
F
E
V
KNAS---V-------KGSFE
D
V
S
F
Y
V
RSG-----
E
I
V
GVSGLMGA
G
R
T
E
M
M
R
A
L
FGVDRLDTG
E
I
W
IAGKKT-AIK
N
--
P
Q
E
A
V
K
K
G
L
G
F
ITEN--------RKDE------------------------------------------
G
--
L
L
LD
T
S
I
RENIALPNLSSFSP-------------------------------KGLID
H
K
R
E
A
E
F
V
D
L
L
I
K
R
L--TIKTA-SPE
T
H
A
R
HLSGGNQ
Q
K
V
V
I
A
K
WIGIG
P
K
V
L
I
LDEPTRGVDVGAK
R
E
I
Y
T
L
M
N
E
L
T
E-R-
G
V
A
I
I
M
VSSE
L
P
E
I
LGMS
D
R
I
I
V
V
H-----E--GRIS
G
E
I
H
A
R
E
A
T
Q
E
R
I
M
T
LATGGR-----------------------------------
39
HHSearch
66.92
24%
41
- C1 -
4F4C
2
PGP1_CAEEL
A:
[415-1305]
----------------------------------------------------------------------
D
I
T
V
E
N
V
H
F
T
Y
P
-
S
RPD----
V
-
P
I
L
R
G
M
N
L
R
V
-
N
------
A
G
Q
T
V
A
L
V
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S
S
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C
G
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I
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---------
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D
G
---
V
-----------
D
V
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--
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L
-----
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-
F
L
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N
V
--
A
--
V
V
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A
-
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-
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N
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----
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T
R
-----------------
E
E
-----
M
V
A
----------
A
C
K
-----
M
A
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-
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T
-------
L
PN
G
--
Y
N
-
T
L
V
G
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R
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L
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G
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L
L
L
D
E
A
T
S
---
A
L
D
A
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Q
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D
K
A
A
--
K
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R
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-
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A
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G
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V
V
-
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-
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D
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L
Y
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A
V
D
S
A
A
E
GER
I
G
K
D
A
L
S
R
L
K
Q
E
L
E
E
N
NAQKTN-----------
L
F
E
I
L
Y
H
A
RPH
A
L
S
L
F
I
G
M
S
T
A
T
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G
G
F
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Y
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F
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M
N
V
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A
GNPADFL
S
-------
Q
G
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F
W
A
L
M
F
L
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L
A
A
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L
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L
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R
N
V
L
S
QHIGFFDSPQNA
S
---
G
---------
K
I
S
T
R
L
A
T
D
V
P
N
L
R
T
A
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F
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L
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A
G
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L
A
F
F
Y
G
W
Q
-------
M
------
A
L
L
I
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A
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L
P
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V
A
F
G
Q
Y
L
R
G
R
RF
T
GKNVKSA
S
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L
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L
L
N
T
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A
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R
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L
A
L
I
I
TDP
P
T
----------
M
-----
Q
---
P
M
R
V
L
R
V
M
Y
A
I
T
I
S
T
S
TLGFAT
S
Y
F
P
E
Y
A
K
A
T
F
A
G
G
I
I
F
G
M
L
R
KISKIDSLSLAGEK
K
K
L
Y
G
K
V
I
F
K
N
V
R
---
F
A
Y
PERPE
I
E
I
L
K
G
L
S
F
S
V
E
P
G
-----
Q
T
L
A
L
V
G
P
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G
C
G
K
S
T
V
V
A
L
L
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R
F
Y
D
T
L
G
G
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I
F
I
D
G
S
E
I
-
K
T
L
N
---
P
E
H
T
R
S
Q
I
A
I
V
S
Q
E
--------
P
T
-----------------------------------------------
L
F
-
D
C
S
I
A
E
N
I
I
Y
G
L
D
P
S
S
V
T
-------------------------------
M
A
Q
V
E
E
A
A
R
L
A
N
I
H
N
F
I
A
E
L
PE
G
F
E
-
T
-
R
V
G
D
R
G
T
Q
L
S
G
G
Q
K
Q
R
I
A
I
A
R
A
L
V
R
N
P
K
I
L
L
L
D
E
A
T
S
A
L
D
T
E
S
E
K
V
V
Q
E
A
L
D
R
A
R
--
E
-
G
R
T
C
I
V
I
A
H
R
L
N
T
V
M
-
N
A
D
C
I
A
V
V
S
-----
N
--
G
T
I
I
E
K
G
T
H
T
Q
L
M
S
E
---------------------------------------------
41
HHSearch
64.03
22%
23
- C1 -
3BK7
4
?
A:
[83-547]
----------------------------------------------------------------------
A
I
S
I
V
N
L
P
E
Q
L
D
-
E
D
CVHRYG
V
-
N
A
F
V
L
Y
R
L
P
I
V
K
------
D
G
M
V
V
G
I
V
G
P
N
G
T
G
K
T
T
A
V
K
I
L
A
G
Q
L
I
P
N
L
--
C
E
D
N
DS
W
D
N
V
I
R
A
F
R
G
---
N
-----------
E
L
Q
N
Y
--
F
E
R
----
L
K
N
G
E
I
R
P
--
V
--
V
K
P
Q
Y
V
D
-
L
L
P
K
-
A
V
K
G
K
V
R
E
-------------------------------------
L
L
K
K
----------
V
D
E
-----
V
G
K
F
E
E
-
V
V
K
E
-------
L
--
E
--
L
E
-
N
V
L
D
R
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L
H
Q
L
S
G
G
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L
Q
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V
A
I
A
A
A
L
L
R
K
A
H
F
Y
F
F
D
E
P
S
S
---
Y
L
D
I
R
Q
R
L
K
V
A
R
V
I
R
R
L
A
N
-
E
G
K
A
V
L
V
V
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D
L
A
V
L
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Y
L
S
D
V
I
H
V
V
Y
G
E
P
G
V
-
Y
-
G
I
F
S
-
K
P
K
G
T
R
N
----------------------------------------
G
-----------------
I
------------------------------------------
N
-------
E
-------
F
--
L
--------------------------------------------------------
Q
---
G
YLKDENVRF
R
-----------------------------------------
P
--------
Y
------
E
------------------
I
--
R
-----------------------------
F
----------------------------------------------------------
T
K
----------
L
-----
S
ERV
D
--------------------------------------------------------
V
E
R
E
T
L
V
E
Y
P
R
L
V
---
K
D
YG----
S
F
K
L
E
V
E
P
G
E
I
R
K
G
-----
E
V
I
G
I
V
G
P
N
G
I
G
K
T
T
F
V
K
M
L
A
G
V
E
E
P
T
E
G
K
V
E
W
D
L
-----------------
T
V
A
Y
K
P
Q
Y
--------
I
K
-----------------------------------------------
A
E
Y
E
G
T
V
Y
E
L
L
S
K
I
D
S
S
K
------------------------------------
L
----
N
S
N
F
Y
K
T
E
L
L
K
P
L
--
G
I
I
-
D
-
L
Y
D
R
N
V
E
D
L
S
G
G
E
L
Q
R
V
A
I
A
A
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L
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R
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A
D
I
Y
L
L
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E
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A
Y
L
D
V
E
Q
R
L
A
V
S
R
A
I
R
H
L
M
E
K
N
-
E
K
T
A
L
V
V
E
H
D
V
L
M
I
D
Y
V
S
D
R
L
I
V
F
E
-----
G
--------------------------------------------------------------
38
HHSearch
63.87
23%
29
- C1 -
4FIN
13
ETTA_ECOLI
A:
[5-520]
----------------------------------------------------------------------
V
Y
T
M
H
R
V
G
K
V
V
P
P
K
-------
R
-
H
I
L
K
N
I
S
L
S
F
-
F
------
P
G
A
K
I
G
V
L
G
L
N
G
A
G
K
S
T
L
L
R
I
M
A
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I
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K
D
I
E
--
G
E
A
R
---------
P
Q
P
---------------------------------
D
I
K
I
--
G
--
Y
L
P
Q
E
P
Q
-
L
N
P
E
H
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S
I
E
E
A
V
S
E
----
V
---
V
N
A
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A
L
YADPDA
D
F
D
---
K
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A
A
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L
-----
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V
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R
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-------
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L
P
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---
H
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F
----
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-
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----------------------------------------
K
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A
R
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K
S
I
------------------------------------------
E
-------
K
E
L
E
W
V
R
Q
G
--
T
--------------------------------------------------------
K
--------------------------------------------------------KGKARLAR
F
------
E
------------------
E
--
L
-----------------------------
N
S
T
E
Y
------------------------------------------------------
Q
K
R
N
E
TNE
L
F
I
P
P
-----
G
---
P
--------------------------------------------------------
R
L
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D
K
V
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E
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S
N
L
R
---
K
S
Y
GD---
R
L
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I
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D
L
S
F
S
I
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G
-----
A
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I
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L
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E
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V
---------------
K
L
A
S
V
D
Q
F
--------
R
--
D
------------------------------------------
S
--
M
D
N
S
K
T
V
W
E
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G
G
L
D
I
M
K
I
--------------------------------------
G
N
T
E
M
P
S
R
A
Y
V
G
R
F
--
N
F
K
G
V
-
D
Q
G
K
R
V
G
E
L
S
G
G
E
R
G
R
L
H
L
A
K
L
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N
M
L
L
L
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E
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T
N
D
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I
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T
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R
A
L
E
N
A
L
L
E
F
P
-----
G
C
A
M
V
I
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H
D
R
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F
L
D
R
I
A
T
H
I
L
D
Y
Q
-----
D
--
E
G
K
V
--------------------------------------------------------
51
HHSearch
63.34
26%
-121
* C1 *
4TQU
-
?
S:
[4-223]
----------------------------------------------------------------------
S
V
S
I
Q
N
V
V
K
R
Y
D
-
K
-------
T
-
T
V
V
H
G
V
S
L
D
I
-
E
------
P
G
E
F
V
V
L
V
G
P
S
G
C
G
K
S
T
T
L
R
M
V
A
G
L
E
E
I
S
G
--
G
T
I
R
---------
I
D
G
---
R
-----------
V
I
N
D
L
--
A
P
--------
K
D
R
D
V
--
A
--
M
V
F
Q
N
Y
A
-
L
Y
P
H
L
N
V
R
D
N
I
S
F
G
L
R
L
----
K
---
R
-------------------------
T
K
K
----------
S
V
I
-----
D
A
A
V
K
T
-
A
A
D
I
-------
L
--
G
--
L
Q
-
P
L
L
E
R
K
P
S
D
L
S
G
G
Q
R
Q
R
V
A
M
G
R
A
I
V
R
D
P
K
V
F
L
F
D
Q
P
L
S
---
N
L
D
A
K
L
R
T
Q
M
R
A
E
I
K
R
L
H
Q
R
L
G
T
T
V
I
Y
V
T
H
D
Q
V
E
A
M
T
L
A
D
R
I
V
V
M
R
D
G
L
I
E
-
Q
-
I
G
K
P
-
M
D
L
-
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
44
HHSearch
62.78
20%
-6
- C1 -
2IW3
7
EF3A_YEAST
A:
[439-979]
--------------------------------------------------------------------------
C
E
F
S
L
A
Y
G
-
A
-------
K
-
I
L
L
N
K
T
Q
L
R
L
-
K
------
R
A
R
R
Y
G
I
C
G
P
N
G
C
G
K
S
T
L
M
R
A
I
A
N
--------
G
Q
V
-----------
D
G
---
F
-----------
P
T
Q
--------------
E
E
C
R
T
--
V
--
Y
V
E
H
D
I
D
G
T
H
S
D
T
S
V
L
D
F
V
F
E
S
G
V
-------------------------------------------------
G
T
-----
K
E
A
I
K
D
-
K
L
I
E
-------
F
--
G
--
F
T
D
E
M
I
A
M
P
I
S
A
L
S
G
G
W
K
M
K
L
A
L
A
R
A
V
L
R
N
A
D
I
L
L
L
D
E
P
T
N
---
H
L
D
T
V
N
V
A
W
L
V
N
Y
L
N
T
C
----
G
I
T
S
I
T
I
S
H
D
S
V
F
L
D
N
V
C
E
Y
I
I
N
Y
E
G
L
K
L
R
-
K
Y
K
G
N
F
-
T
E
F
-
V
K
K
----------------------------------------
C
-----------------
P
------------------------------------------
A
A------
K
-------
A
--
Y
--------------------------------------------------------
E
ELS
N
---------
T
-----------------------------------------
D
--------
L
------
E
------------------
F
--
K
-----------------------------
F
----------------------------------------------------------
P
E
----------
P
GYLEG
V
---
K
--------------------------------------------------------
T
K
Q
K
A
I
V
K
V
T
N
M
E
---
F
Q
Y
PGTS-
K
P
Q
I
T
D
I
N
F
Q
C
S
L
S
-----
S
R
I
A
V
I
G
P
N
G
A
G
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S
T
L
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L
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T
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Y
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K
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H
A
F
A
H
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H
L
D
K
T
P
S
E
Y
I
Q
W
R
F
Q
T
G
E
D
R
ETMDRANRQINEND
A
E
A
M
N
K
I
F
K
I
EG
T
P
R
R
IAGIH
S
R
R
K
F
KN
T
Y
E
Y
E
C
S
F
L
L
G
E
N
I
G
M
K
S
E
R
W
V
P
M
M
SVD
N
A
W
I
P
RGELVESH
S
K
M
V
A
E
V
D
M
K
E
A
L
A
S
G
Q
-
F
R
P
L
T
R
K
E
I
E
E
H
C
S
M
L
--
G
L
D
P
E
I
V
S
H
S
R
I
R
G
L
S
G
G
Q
K
V
K
L
V
L
A
A
G
T
W
Q
R
P
H
L
I
V
L
D
E
P
T
N
Y
L
D
R
D
S
L
G
A
L
S
K
A
L
K
E
F
-----
E
G
G
V
I
I
I
T
H
S
A
E
F
T
K
N
L
T
E
E
V
W
A
V
K
-----
D
--
G
R
M
T
P
S
------------------------------------------------------
53
HHSearch
61.49
29%
-114
- C1 -
4YER
4
?
A:
[5-253]
----------------------------------------------------------------------
I
I
V
V
E
N
L
V
K
K
F
G
-
D
-------
F
-
E
A
V
K
G
V
S
F
S
V
-
K
------
K
G
E
I
F
A
F
L
G
P
N
G
A
G
K
T
T
T
I
H
M
L
T
T
L
L
K
P
T
S
--
G
K
A
W
---------
V
A
G
---
H
-----------
D
V
L
K
E
--
P
------
R
-
E
V
R
R
K
I
--
G
--
I
V
F
Q
D
Q
S
-
L
D
R
E
L
T
A
Y
E
N
M
Y
I
H
G
K
I
----
Y
---
G
-------------------------
Y
G
G
----------
E
K
L
-----
K
K
R
I
L
E
-
L
L
E
F
-------
V
--
E
--
L
L
-
E
F
K
D
K
P
V
K
T
F
S
G
G
M
A
R
R
L
E
I
A
R
S
L
I
H
E
P
E
V
L
F
L
D
E
P
T
I
---
G
L
D
P
H
T
R
A
H
M
W
E
Y
I
S
K
M
K
K
E
H
N
M
T
I
F
L
T
T
H
Y
M
D
E
A
E
Q
L
A
D
R
V
A
I
I
D
H
G
K
I
I
-
A
-
L
G
T
P
-
T
E
L
-
K
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
55
HHSearch
60.84
28%
-109
- C1 -
2IT1
-
?
A:
[3-221]
----------------------------------------------------------------------
E
I
K
L
E
N
I
V
K
K
F
G
-
N
-------
F
-
T
A
L
N
N
I
N
L
K
I
-
K
------
D
G
E
F
M
A
L
L
G
P
S
G
S
G
K
S
T
L
L
Y
T
I
A
G
I
Y
K
P
T
S
--
G
K
I
Y
---------
F
D
E
---
K
-----------
D
V
T
E
L
--
P
P
--------
K
D
R
N
V
--
G
--
L
V
F
Q
N
W
A
-
L
Y
P
H
M
T
V
Y
K
N
I
A
F
P
L
E
L
----
R
---
K
-------------------------
A
P
R
----------
E
E
I
-----
D
K
K
V
R
E
-
V
A
K
M
-------
L
--
H
--
I
D
-
K
L
L
N
R
Y
P
W
Q
L
S
G
G
Q
Q
Q
R
V
A
I
A
R
A
L
V
K
E
P
E
V
L
L
L
D
E
P
L
S
---
N
L
D
A
L
L
R
L
E
V
R
A
E
L
K
R
L
Q
K
E
L
G
I
T
T
V
Y
V
T
H
D
Q
A
E
A
L
A
M
A
D
R
I
A
V
I
R
E
G
E
I
L
-
Q
-
V
G
T
P
-
D
E
V
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
40
HHSearch
60.60
19%
16
- C1 -
3J16
2
RLI1_YEAST
B:
[82-559]
---------------------------------------------------------------------------
H
V
T
H
R
Y
S
-
A
-------
N
S
F
K
L
H
R
L
-
P
T
P
-
R
------
P
G
Q
V
L
G
L
V
G
T
N
G
I
G
K
S
T
A
L
K
I
L
A
G
K
Q
K
P
N
L
--
G
R
F
D
---------
D
P
P
---
E
W
Q
E
I
I
K
Y
F
RGS
E
L
Q
N
Y
--
F
T
-----
K
-
M
L
E
D
D
I
--
K
A
I
I
K
P
Q
Y
V
D
-
N
I
P
R
-
A
I
K
G
P
V
Q
K
V
G
E
L
----
L
---
K
-------------------------
L
R
M
----------
E
K
S
-----
P
E
D
V
K
R
-
Y
I
K
I
-------
L
--
Q
--
L
E
-
N
V
L
K
R
D
I
E
K
L
S
G
G
E
L
Q
R
F
A
I
G
M
S
C
V
Q
E
A
D
V
Y
M
F
D
E
P
S
S
---
Y
L
D
V
K
Q
R
L
N
A
A
Q
I
I
R
S
L
L
A
-
P
T
K
Y
V
I
C
V
E
H
D
L
S
V
L
D
Y
L
S
D
F
V
C
I
I
Y
G
V
P
S
V
-
Y
-
G
V
V
T
-
L
P
A
-
S
V
R
----------------------------------------
E
-----------------
G
------------------------------------------
I
-------
N
-------
I
F
-
L
--------------------------------------------------------
D
---
G
HIPAENLRF
R
-----------------------------------------
T
--------
E
------
A
------------------
L
--
Q
-----------------------------
F
----------------------------------------------------------
R
I
----------
A
-----
D
---
A
TEDLQN--------------------------------------------------
D
S
A
S
R
A
F
S
Y
P
S
L
K
K
T
Q
G
-------
D
F
V
L
N
V
E
E
G
E
F
S
D
S
-----
E
I
L
V
M
M
G
E
N
G
T
G
K
T
T
L
I
K
L
L
A
G
A
L
K
P
D
E
G
Q
D
I
P
-----------------
K
L
N
V
S
M
K
P
Q
K
--------
I
A
-----------------------------------------------
P
K
F
P
G
T
V
R
Q
L
F
F
K
K
I
R
G
Q
-------------------------------------
F
L
---
N
P
Q
F
Q
T
D
V
V
K
P
L
--
R
I
D
-
D
-
I
I
D
Q
E
V
Q
H
L
S
G
G
E
L
Q
R
V
A
I
V
L
A
L
G
I
P
A
D
I
Y
L
I
D
E
P
S
A
Y
L
D
S
E
Q
R
I
I
C
S
K
V
I
R
R
F
I
L
H
N
-
K
K
T
A
F
I
V
E
H
D
F
I
M
A
T
Y
L
A
D
K
V
I
V
F
E
-----
G
I
P
S
K
N
A
H
A
R
A
P
E
S
L
L
T
----------------------------------------------
43
HHSearch
55.92
20%
39
- C1 -
3OZX
5
?
A:
[4-465]
---------------------------------------------------------------------------
E
V
I
H
R
Y
K
-
V
N------
G
-
F
K
L
F
G
L
P
T
-
P
-
K
------
N
N
T
I
L
G
V
L
G
K
N
G
V
G
K
T
T
V
L
K
I
L
A
G
E
I
I
P
N
F
--
G
D
P
N
---------
S
K
V
---
G
-----------
K
D
E
V
----
L
K
----
R
-
F
R
G
K
E
I
--
Y
--
N
Y
F
K
E
L
Y
--
S
N
E
L
K
I
V
H
K
I
Q
Y
V
E
Y
A
S
KFL
K
G--
T
V
-----------------
N
E
----
I
L
T
K
----------
I
D
E
-----
R
G
K
K
D
E
-
V
K
E
L
-------
L
--
N
--
M
T
-
N
L
W
N
K
D
A
N
I
L
S
G
G
G
L
Q
R
L
L
V
A
A
S
L
L
R
E
A
D
V
Y
I
F
D
Q
P
S
S
---
Y
L
D
V
R
E
R
M
N
M
A
K
A
I
R
E
L
L
K
--
N
K
Y
V
I
V
V
D
H
D
L
I
V
L
D
Y
L
T
D
L
I
H
I
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Y
G
E
S
-
S
-
V
-
Y
G
R
V
-
S
K
S
-
Y
A
A
----------------------------------------
R
-----------------
V
G
I
----------------------------------------
N
-------
N
-------
F
--
L
--------------------------------------------------------
K
---
G
---------
Y
LP---------------------------------------
A
--------
E
------
N
------------------
M
--
K
-----------------------------
I
----------------------------------------------------------
R
P
DEIKFMLK-----------------------------------------------------------------------
L
K
T
K
M
K
W
T
K
I
I
K
K
L
G
-------
D
F
Q
L
V
V
D
N
G
E
A
K
E
G
-----
E
I
I
G
I
L
G
P
N
G
I
G
K
T
T
F
A
R
I
L
V
G
E
I
T
A
D
E
G
S
V
T
P
E
K
Q
----------------
I
L
S
Y
K
P
Q
R
--------
I
---------------------------------------------
F
--
P
N
Y
D
G
T
V
Q
Q
Y
L
E
N
A
S
K
D
A
L
---------------------------------------
S
T
S
S
W
F
F
E
E
V
T
K
R
L
--
N
L
H
-
R
-
L
L
E
S
N
V
N
D
L
S
G
G
E
L
Q
K
L
Y
I
A
A
T
L
A
K
E
A
D
L
Y
V
L
D
Q
P
S
S
Y
L
D
V
E
E
R
Y
I
V
A
K
A
I
K
R
V
T
R
E
R
-
K
A
V
T
F
I
I
D
H
D
L
S
I
H
D
Y
I
A
D
R
I
I
V
F
K
-----
G
--
E
P
E
K
--------------------------------------------------------
33
Fugue
55.66
19%
36
- C1 -
3J16
4
RLI1_YEAST
B:
[1-608]
MS
D
K
N
S
R
I
A
I
V
S
ADKCKPKKCRQ
E
C
K
R
S
C
P
V
V
K
T
GKLC
I
E
V
T
PTSK
I
A
F
I
S
EILCIGCG
I
C
V
K
K
CPFDA
I
Q
I
I
N
L
P
T
N
L
E
A
H
-
V
-------
T
-
H
R
Y
S
A
N
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L
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H
R
L
P
T
P
R
P
G
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V
L
G
L
V
G
T
N
G
I
G
K
S
T
A
L
K
I
L
A
G
K
Q
K
P
N
L
--
G
--
R
---------
F
D
D
---
P
-----------
P
E
W
Q
E
--
I
I
K
----
Y
-
F
R
G
S
E
L
--
Q
--
N
Y
F
T
K
M
L
-
E
D
D
I
K
A
I
I
K
P
Q
Y
V
D
N
I
P
----
R
---
A
I
-----------------
K
G
PVQK
V
G
E
L
----------
L
K
L
R
MEKS
P
E
D
V
K
R
-
Y
I
K
I
-------
L
--
Q
--
L
E
-
N
V
L
K
R
D
I
E
K
L
S
G
G
E
L
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F
A
I
G
M
S
C
V
Q
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A
D
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Y
M
F
D
E
P
S
S
---
Y
L
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A
A
Q
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I
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S
L
L
A
-
P
T
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Y
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V
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H
D
L
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L
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Y
L
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F
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C
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Y
G
V
P
S
V
-
Y
-
G
V
V
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P
A
-
S
V
R
----------------------------------------
E
-----------------
G
------------------------------------------
I
-------
N
-------
I
--
F
--------------------------------------------------------
L
---
D
---------
G
-----------------------------------------
H
--------
I
------
P
------------------
A
--
E
NLRFRT
E
A
L
Q
F
RIA---------------
D
----------------------------------------------------------
A
T
----------
E
-----
D
---
L
--------------------------------------------------------
Q
N
D
S
A
S
R
A
F
S
Y
P
S
---
L
-------
K
K
T
Q
G
D
F
V
L
N
V
E
E
G
E
F
S
D
S
E
I
L
V
M
M
G
E
N
G
T
G
K
T
T
L
I
K
L
L
A
G
A
L
K
P
D
E
G
Q
D
--
I
P
K
L
N
-
V
S
M
K
--
P
Q
K
I
A
P
K
F
P
G
T
V
R
Q
L
--------
F
F
K
K
------------------------------------------
I
--
R
-------------------------------------------------------
G
Q
F
L
N
P
Q
F
Q
T
D
V
V
K
P
L
--
R
I
D
D
I
--
I
D
Q
E
V
Q
H
L
S
G
G
E
L
Q
R
V
A
I
V
L
A
L
G
I
P
A
D
I
Y
L
I
D
E
P
S
A
Y
L
D
S
E
Q
R
I
I
C
S
K
V
I
R
R
F
I
L
-
H
N
K
K
T
A
F
I
V
E
H
D
F
I
M
A
T
Y
L
A
D
K
V
I
V
F
E
G
I
PS
K
N
--
A
H
A
R
A
P
E
S
L
L
T
G
C
N
R
F
L
K
N
L
N
V
T
F
R
RDPNSF
R
P
R
I
N
K
L
DS
Q
M
D
K
E
Q
K
S
S
GNYFFLDNTGI
42
HHSearch
54.24
21%
15
- C1 -
1YQT
4
?
A:
[25-480]
--------------------------------------------------------------------------
E
D
C
V
H
R
Y
G
-
V
N------
A
-
F
V
L
Y
R
L
P
-
V
V
-
K
------
E
G
M
V
V
G
I
V
G
P
N
G
T
G
K
S
T
A
V
K
I
L
A
G
Q
L
I
P
N
L
CG
D
N
D
S
---------
W
D
G
---
V
-----------
I
R
A
F
R
GN
E
L
Q
N
Y
F
E
K
-
L
K
N
G
E
I
R
P
V
--
V
K
P
Q
Y
V
D
-
L
I
P
K
A
V
K
G
K
V
I
E
L
--------------------------------------
L
K
K
----------
A
D
E
-----
T
G
K
L
E
E
-
V
V
K
A
-------
L
--
E
--
L
E
-
N
V
L
E
R
E
I
Q
H
L
S
G
G
E
L
Q
R
V
A
I
A
A
A
L
L
R
N
A
T
F
Y
F
F
D
E
P
S
S
---
Y
L
D
I
R
Q
R
L
N
A
A
R
A
I
R
R
L
S
E
-
E
G
K
S
V
L
V
V
E
H
D
L
A
V
L
D
Y
L
S
D
I
I
H
V
V
Y
G
E
P
G
V
-
Y
-
G
I
F
S
Q
P
K
G
-
T
R
N
----------------------------------------
G
-----------------
I
------------------------------------------
N
-------
E
-------
F
--
L
--------------------------------------------------------
R
GYL
K
---------
D
-----------------------------------------
E
--------
N
VRFRP
Y
E
------------------
I
--
K
-----------------------------
F
----------------------------------------------------------
T
K
----------
T
-----
G
ERV
E
--------------------------------------------------------
I
E
R
E
T
L
V
T
Y
P
R
L
V
K
D
Y
G
-------
S
F
R
L
E
V
E
P
G
E
I
K
K
G
-----
E
V
I
G
I
V
G
P
N
G
I
G
K
T
T
F
V
K
M
L
A
G
V
E
E
P
T
E
G
K
I
E
W
D
L
-----------------
T
V
A
Y
K
P
Q
Y
--------
I
---------------------------------------------
K
--
A
D
Y
E
G
T
V
Y
E
L
L
S
K
I
D
A
S
K
L
----------------------------------------
N
S
N
F
Y
K
T
E
L
L
K
P
L
--
G
I
I
-
D
-
L
Y
D
R
E
V
N
E
L
S
G
G
E
L
Q
R
V
A
I
A
A
T
L
L
R
D
A
D
I
Y
L
L
D
E
P
S
A
Y
L
D
V
E
Q
R
L
A
V
S
R
A
I
R
H
L
M
E
K
N
-
E
K
T
A
L
V
V
E
H
D
V
L
M
I
D
Y
V
S
D
R
L
M
V
F
E
-----
G
--
E
P
G
---------------------------------------------------------
57
HHSearch
53.80
28%
-113
- C1 -
2YYZ
3
?
A:
[3-221]
----------------------------------------------------------------------
S
I
R
V
V
N
L
K
K
Y
F
G
-
K
-------
V
-
K
A
V
D
G
V
S
F
E
V
-
K
------
D
G
E
F
V
A
L
L
G
P
S
G
C
G
K
T
T
T
L
L
M
L
A
G
I
Y
K
P
T
S
--
G
E
I
Y
---------
F
D
D
---
V
-----------
L
V
N
D
I
--
P
P
--------
K
Y
R
E
V
--
G
--
M
V
F
Q
N
Y
A
-
L
Y
P
H
M
T
V
F
E
N
I
A
F
P
L
R
A
----
R
---
R
-------------------------
I
S
K
----------
D
E
V
-----
E
K
R
V
V
E
-
I
A
R
K
-------
L
--
L
--
I
D
-
N
L
L
D
R
K
P
T
Q
L
S
G
G
Q
Q
Q
R
V
A
L
A
R
A
L
V
K
Q
P
K
V
L
L
F
D
E
P
L
S
---
N
L
D
A
N
L
R
M
I
M
R
A
E
I
K
H
L
Q
Q
E
L
G
I
T
S
V
Y
V
T
H
D
Q
A
E
A
M
T
M
A
S
R
I
A
V
F
N
Q
G
K
L
V
-
Q
-
Y
G
T
P
-
D
E
V
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
53.28
27%
-124
- C1 -
4U00
3
?
A:
[5-218]
-----------------------------------------------------------------------
I
R
I
R
N
L
H
K
W
F
G
-
P
-------
L
-
H
V
L
K
G
I
H
L
E
V
-
A
------
P
G
E
K
L
V
I
I
G
P
S
G
S
G
K
S
T
L
I
R
T
I
N
R
L
E
D
F
Q
E
--
G
E
V
V
---------
V
D
G
---
L
-----------
S
V
K
D
D
--
R
A
L
----
R
-
E
I
R
R
E
V
--
G
--
M
V
F
Q
Q
F
N
-
L
F
P
H
M
T
V
L
E
N
V
T
L
A
-------
P
---
M
R
-----------------
V
R
----
R
W
P
R
----------
E
K
A
-----
E
K
K
A
L
E
-
L
L
E
R
-------
V
--
G
--
I
L
-
D
Q
A
R
K
Y
P
A
Q
L
S
G
G
Q
Q
Q
R
V
A
I
A
R
A
L
A
M
E
P
K
I
M
L
F
D
E
P
T
S
---
A
L
D
P
E
M
V
G
E
V
L
D
V
M
R
D
L
A
Q
-
G
G
M
T
M
V
V
V
T
H
E
M
G
F
A
R
E
V
A
D
R
V
V
F
M
D
G
G
Q
I
V
-
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
3
PsiBlast_PDB
52.24
35%
-42
- C1 -
1GAJ
6
LIVG_METJA
A:
[11-232]
--------------------------------------------------------------------------
E
N
I
V
K
Y
F
G
-
E
-------
F
-
K
A
L
D
G
V
S
I
S
V
-
N
------
K
G
D
V
T
L
I
I
G
P
N
G
S
G
K
S
T
L
I
N
V
I
T
G
F
L
K
A
D
E
--
G
R
V
Y
---------
F
E
N
---
K
-----------
D
I
T
N
K
--
E
P
A
----
E
-
L
Y
H
Y
G
I
--
V
--
R
T
F
Q
T
P
Q
-
P
L
K
E
M
T
V
L
E
N
L
L
I
G
-
E
I
----
N
PGE
S
P
-----------------
L
N
----
S
L
F
Y
----------
K
K
W
-----
I
P
K
E
E
E
-
M
V
E
K
A
F
K
I
L
E
F
L
--
K
--
L
S
-
H
L
Y
D
R
K
A
G
E
L
S
G
G
Q
M
K
L
V
E
I
G
R
A
L
M
T
N
P
K
M
I
V
M
D
Q
P
I
A
---
G
V
A
P
G
L
A
H
D
I
F
N
H
V
L
E
L
K
A
-
K
G
I
T
F
L
I
I
E
H
R
L
D
I
V
L
N
Y
I
D
H
L
Y
V
M
F
N
G
Q
I
I
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
12
PsiBlast_PDB
51.80
29%
-46
- C1 -
2IT1
-
?
A:
[2-223]
---------------------------------------------------------------------
V
E
I
K
L
E
N
I
V
K
K
F
G
-
N
-------
F
-
T
A
L
N
N
I
N
L
K
I
-
K
------
D
G
E
F
M
A
L
L
G
P
S
G
S
G
K
S
T
L
L
Y
T
I
A
G
I
Y
K
P
T
S
--
G
K
I
Y
---------
F
D
E
---
K
-----------
D
V
T
E
L
--
P
P
K
----
D
----
R
N
V
--
G
--
L
V
F
Q
N
W
A
-
L
Y
P
H
M
T
V
Y
K
N
I
A
F
P
L
E
L
----
R
---
K
A
-----------------
P
R
----
E
E
I
D
----------
K
K
V
-----
R
E
V
A
K
M
L
H
I
D
K
-------
L
----------
L
N
R
Y
P
W
Q
L
S
G
G
Q
Q
Q
R
V
A
I
A
R
A
L
V
K
E
P
E
V
L
L
L
D
E
P
L
S
NLD
A
L
L
R
L
E
V
R
A
--
E
L
K
R
L
Q
K
E
-
L
G
I
T
T
V
Y
V
T
H
D
Q
A
E
A
L
A
M
A
D
R
I
A
V
I
R
E
G
E
I
L
-
Q
-
V
G
T
P
-
D
E
V
-
Y
Y
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
51.80
27%
-120
- C1 -
4U02
1
?
A:
[5-218]
-----------------------------------------------------------------------
I
R
I
R
N
L
H
K
W
F
G
-
P
-------
L
-
H
V
L
K
G
I
H
L
E
V
-
A
------
P
G
E
K
L
V
I
I
G
P
S
G
S
G
K
S
T
L
I
R
T
I
N
R
L
E
D
F
Q
E
--
G
E
V
V
---------
V
D
G
---
L
-----------
S
V
K
D
D
--
R
A
L
----
R
-
E
I
R
R
E
V
--
G
--
M
V
F
Q
Q
F
N
-
L
F
P
H
M
T
V
L
E
N
V
T
L
A
-------
P
---
M
R
-----------------
V
R
----
R
W
P
R
----------
E
K
A
-----
E
K
K
A
L
E
-
L
L
E
R
-------
V
--
G
--
I
L
-
D
Q
A
R
K
Y
P
A
Q
L
S
G
G
Q
Q
Q
R
V
A
I
A
R
A
L
A
M
E
P
K
I
M
L
F
D
E
P
T
S
---
A
L
D
P
E
M
V
G
E
V
L
D
V
M
R
D
L
A
Q
-
G
G
M
T
M
V
V
V
T
H
E
M
G
F
A
R
E
V
A
D
R
V
V
F
M
D
G
G
Q
I
V
-
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
59
HHSearch
51.66
24%
-113
- C1 -
1V43
-
?
A:
[12-237]
----------------------------------------------------------------------
E
V
K
L
E
N
L
T
K
R
F
G
-
N
-------
F
-
T
A
V
N
K
L
N
L
T
I
-
K
------
D
G
E
F
L
V
L
L
G
P
S
G
C
G
K
T
T
T
L
R
M
I
A
G
L
E
E
P
T
E
--
G
R
I
Y
---------
F
G
D
---
R
-----------
D
V
T
Y
L
--
P
P
--------
K
D
R
N
I
--
S
--
M
V
F
Q
-------
H
M
T
V
Y
E
N
I
A
F
P
L
------
K
---
K
-------------------------
F
P
K
----------
D
E
I
-----
D
K
R
V
R
W
-
A
A
E
L
-------
L
--
Q
--
I
E
-
E
L
L
N
R
Y
P
A
Q
L
S
G
G
Q
R
Q
R
V
A
V
A
R
A
I
V
V
E
P
D
V
L
L
M
D
E
P
L
S
---
N
L
D
A
K
L
R
V
A
M
R
A
E
I
K
K
L
Q
Q
K
L
K
V
T
T
I
Y
V
T
H
D
Q
V
E
A
M
T
M
G
D
R
I
A
V
M
N
R
G
Q
L
L
-
Q
-
I
G
S
P
-
T
E
V
-
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
50.82
35%
-53
- C1 -
1G6H
3
LIVG_METJA
A:
[11-232]
--------------------------------------------------------------------------
E
N
I
V
K
Y
F
G
-
E
-------
F
-
K
A
L
D
G
V
S
I
S
V
-
N
------
K
G
D
V
T
L
I
I
G
P
N
G
S
G
K
S
T
L
I
N
V
I
T
G
F
L
K
A
D
E
--
G
R
V
Y
---------
F
E
N
---
K
-----------
D
I
T
N
K
--
E
P
A
----
E
-
L
Y
H
Y
G
I
--
V
--
R
T
F
Q
T
P
Q
-
P
L
K
E
M
T
V
L
E
N
L
L
I
G
-
E
I
----
C
PGE
S
P
-----------------
L
N
----
S
L
F
Y
----------
K
K
W
-----
I
P
K
E
E
E
-
M
V
E
K
A
F
K
I
L
E
F
L
--
K
--
L
S
-
H
L
Y
D
R
K
A
G
E
L
S
G
G
Q
M
K
L
V
E
I
G
R
A
L
M
T
N
P
K
M
I
V
M
D
E
P
I
A
---
G
V
A
P
G
L
A
H
D
I
F
N
H
V
L
E
L
K
A
-
K
G
I
T
F
L
I
I
E
H
R
L
D
I
V
L
N
Y
I
D
H
L
Y
V
M
F
N
G
Q
I
I
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
22
PsiBlast_CBE
48.36
35%
-56
- C1 -
1G9X
3
LIVG_METJA
B:
[11-232]
--------------------------------------------------------------------------
E
N
I
V
K
Y
F
G
-
E
-------
F
-
K
A
L
D
G
V
S
I
S
V
-
C
------
K
G
D
V
T
L
I
I
G
P
N
G
S
G
K
S
T
L
I
N
V
I
T
G
F
L
K
A
D
E
--
G
R
V
Y
---------
F
E
N
---
K
-----------
D
I
T
N
K
--
E
P
A
----
E
-
L
Y
H
Y
G
I
--
V
--
R
T
F
Q
T
P
Q
-
P
L
K
E
M
T
V
L
E
N
L
L
I
G
-
E
I
----
N
PGE
S
P
-----------------
L
N
----
S
L
F
Y
----------
K
K
W
-----
I
P
K
E
E
E
-
M
V
E
K
AFKILEF
L
--
K
--
L
S
-
H
L
Y
D
R
K
A
G
E
L
S
G
G
Q
M
K
L
V
E
I
G
R
A
L
M
T
N
P
K
M
I
V
M
D
E
P
I
A
---
G
V
A
P
G
L
A
H
D
I
F
N
H
V
L
E
L
K
A
-
K
G
I
T
F
L
I
I
E
H
R
L
D
I
V
L
N
Y
I
D
H
L
Y
V
M
F
N
G
Q
I
I
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
1
PsiBlast_PDB
46.35
35%
-42
- C1 -
1G9X
4
LIVG_METJA
A:
[11-232]
--------------------------------------------------------------------------
E
N
I
V
K
Y
F
G
-
E
-------
F
-
K
A
L
D
G
V
S
I
S
V
-
C
------
K
G
D
V
T
L
I
I
G
P
N
G
S
G
K
S
T
L
I
N
V
I
T
G
F
L
K
A
D
E
--
G
R
V
Y
---------
F
E
N
---
K
-----------
D
I
T
N
K
--
E
P
A
----
E
-
L
Y
H
Y
G
I
--
V
--
R
T
F
Q
T
P
Q
-
P
L
K
E
M
T
V
L
E
N
L
L
I
G
-
E
I
----
N
PGE
S
P
-----------------
L
N
----
S
L
F
Y
----------
K
K
W
-----
I
P
K
E
E
E
-
M
V
E
K
A
F
K
I
L
E
F
L
--
K
--
L
S
-
H
L
Y
D
R
K
A
G
E
L
S
G
G
Q
M
K
L
V
E
I
G
R
A
L
M
T
N
P
K
M
I
V
M
D
E
P
I
A
---
G
V
A
P
G
L
A
H
D
I
F
N
H
V
L
E
L
K
A
-
K
G
I
T
F
L
I
I
E
H
R
L
D
I
V
L
N
Y
I
D
H
L
Y
V
M
F
N
G
Q
I
I
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
44.66
30%
-42
- C1 -
4YMU
2
?
J:
[2-216]
-----------------------------------------------------------------------
I
F
V
N
D
V
Y
K
N
F
G
-
S
-------
L
-
E
V
L
K
G
V
T
L
K
V
-
N
------
K
G
E
V
V
V
I
I
G
P
S
G
S
G
K
S
T
L
L
R
C
I
N
L
L
E
E
P
T
K
--
G
E
V
F
---------
I
D
G
VKI
N
-----------
N
G
K
V
N
--
I
N
K
----
V
-
R
Q
K
V
G
M
--
V
--
F
Q
H
--
F
N
-
L
F
P
H
L
T
A
I
E
N
I
T
L
A
-------
P
---
V
K
-----------------
V
K
----
K
M
N
K
----------
K
E
A
-----
E
E
L
A
V
D
-
L
L
A
K
-------
V
--
G
--
L
L
-
D
K
K
D
Q
Y
P
I
K
L
S
G
G
Q
K
Q
R
L
A
I
A
R
A
L
A
M
Q
P
E
V
M
L
F
D
E
P
T
S
---
A
L
D
P
E
M
V
K
E
V
L
N
V
M
K
Q
L
A
N
-
E
G
M
T
M
V
V
V
T
H
E
M
G
F
A
R
E
V
G
D
R
V
I
F
M
D
D
G
V
I
V
-
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
PsiBlast_CBE
44.39
35%
-43
- C1 -
1G9X
3
LIVG_METJA
C:
[11-232]
--------------------------------------------------------------------------
E
N
I
V
K
Y
F
G
-
E
-------
F
-
K
A
L
D
G
V
S
I
S
V
-
C
------
K
G
D
V
T
L
I
I
G
P
N
G
S
G
K
S
T
L
I
N
V
I
T
G
F
L
K
A
D
E
--
G
R
V
Y
---------
F
E
N
---
K
-----------
D
I
T
N
K
--
E
P
A
----
E
-
L
Y
H
Y
G
I
--
V
--
R
T
F
Q
T
P
Q
-
P
L
K
E
M
T
V
L
E
N
L
L
I
G
-
E
I
----
N
PGE
S
P
-----------------
L
N
----
S
L
F
Y
----------
K
K
W
-----
I
P
K
E
E
E
-
M
V
E
K
AFKILEF
L
--
K
--
L
S
-
H
L
Y
D
R
K
A
G
E
L
S
G
G
Q
M
K
L
V
E
I
G
R
A
L
M
T
N
P
K
M
I
V
M
D
E
P
I
A
---
G
V
A
P
G
L
A
H
D
I
F
N
H
V
L
E
L
K
A
-
K
G
I
T
F
L
I
I
E
H
R
L
D
I
V
L
N
Y
I
D
H
L
Y
V
M
F
N
G
Q
I
I
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
44.34
30%
-45
- C1 -
4YMV
1
?
J:
[2-216]
-----------------------------------------------------------------------
I
F
V
N
D
V
Y
K
N
F
G
-
S
-------
L
-
E
V
L
K
G
V
T
L
K
V
-
N
------
K
G
E
V
V
V
I
I
G
P
S
G
S
G
K
S
T
L
L
R
C
I
N
L
L
E
E
P
T
K
--
G
E
V
F
---------
I
D
G
VKI
N
-----------
N
G
K
V
N
--
I
N
K
----
V
-
R
Q
K
V
G
M
--
V
--
F
Q
H
--
F
N
-
L
F
P
H
L
T
A
I
E
N
I
T
L
A
-------
P
---
V
K
-----------------
V
K
----
K
M
N
K
----------
K
E
A
-----
E
E
L
A
V
D
-
L
L
A
K
-------
V
--
G
--
L
L
-
D
K
K
D
Q
Y
P
I
K
L
S
G
G
Q
K
Q
R
L
A
I
A
R
A
L
A
M
Q
P
E
V
M
L
F
D
E
P
T
S
---
A
L
D
P
E
M
V
K
E
V
L
N
V
M
K
Q
L
A
N
-
E
G
M
T
M
V
V
V
T
H
E
M
G
F
A
R
E
V
G
D
R
V
I
F
M
D
D
G
V
I
V
-
E
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
24
PsiBlast_CBE
40.58
31%
-78
- C1 -
5DGX
1
A:
[19-234]
-----------------------------------------------------------------------
V
T
I
K
D
L
S
F
A
F
G
-
E
-------
H
-
K
V
L
S
G
V
S
V
D
I
-
K
------
A
G
Q
T
V
A
F
V
G
K
S
G
S
G
K
T
T
L
T
S
I
I
S
R
F
Y
T
Q
H
E
--
G
E
I
L
---------
L
D
G
---
V
-----------
D
T
R
E
L
--
T
L
E
----
N
-
L
R
S
H
-
L
--
S
--
I
V
S
Q
N
V
H
-
L
F
D
D
-
T
V
Y
N
N
I
A
F
G
-
E
V
----
S
---
E
E
------------------
E
----
V
I
D
A
----------
L
K
------
R
A
N
A
Y
E
-
F
V
Q
E
-------
L
--
S
DG
I
N
-
T
N
I
G
N
N
G
S
K
L
S
G
G
Q
R
Q
R
I
S
I
A
R
A
L
L
K
N
A
P
V
L
I
F
D
E
----------------
L
E
---
S
L
T
K
-
S
C
T
T
I
V
-
I
A
H
R
L
S
T
V
-
E
N
A
D
K
I
V
V
M
D
G
G
R
V
V
-
E
-
S
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------