@TOME V2.3
(Nov 2016)
Ref.
-
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Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Rv0175: (2016-04-20 )
MKAADSAESDAGADQTGPQVKAADSAESDAGELGEDACPEQALVERRPSRLRRGWLVGIAATLLALAGGLGAAGYFALRSHQESQSIAREDLAAIEAAKDCVAATQAPDAGAMSASMQKIIECGTGDFGAQASLYTSMLVEAYQAASVHVQVTDMRAAVERNNNDGSVDVLVALRVKVSNTDSDAHEVGYRLRVRMALDEGRYKIAKLDQVTK
Atome Classification :
(20 SA)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------.........10......----..20........30----......--..40---........50----.........-60........--70..--......80-........----.--90........100-------..--......110---......----...120.-......130-------------..---......--.140.....-..150....-....160.-.----.--....170.......180..-----......190.....-..200..-...-..210.-------------------------------------------------------------------------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKAADSAESDAGADQTG----PQVKAADSAES
D
A
G
----ELGEDA--C
P
E
Q
---
A
L
V
E
R
R
P
S
R
-----
L
R
R
G
W
L
V
G
I
-
A
A
T
L
L
A
L
AGG--L
G
A
A
--
G
Y
F
A
L
RS--
H
Q
E
S
Q
S
I
A
----
R
--
E
D
L
A
A
I
E
A
A
K
D
C
--------
V
A
--ATQAPDA-----G
A
M
S
A
S
----
M
Q
K
I
I
E
C-GTGDFG
A
---------------
Q
A
---
S
L
Y
T
S
M
--
L
V
E
A
YQA
A
S
-
V
H
V
Q
-
V
T
D
M
-
R
A
A
V
ERNN-N----D--G
S
V
D
V
L
V
A
L
R
V
K
VSNT-DS-----
D
A
H
EV
G
Y
R
L
R
V
R
M
A
-LDEG
R
Y
K
-
I
A
K-LDQVTK-------------------------------------------------------------------------------------------------------
7
PsiBlast_PDB
71.25
25%
-14
* C7 *
4MCA
4
?
A:
[95-238]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
T
L
D
T
A
K
A
I
A
H
Y
Q
Q
L
P
V
V
L
I
P
T
I
A
S
T
D
A
P
T
S
A
L
S
V
I
Y
T
E
Q
G
E
F
A
----
E
Y
---
L
I
Y
P
R
N
P
D
M
-----
V
V
M
D
V
A
I
I
A
-
K
A
P
V
R
L
L
V
A
G
--
M
G
D
A
L
S
T
Y
F
E
A
Q
A
--
C
F
D
A
Q
A
T
S
MAGG
K
--
S
T
L
A
A
L
S
L
A
R
L
C
Y
D
T
L
L
A
E
G
V
K
--
A
K
L
A
V
E
A
-----
G
V
V
T
E
A
----
V
E
R
I
I
E
A
-
N
T
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39
Fugue
70.29
22%
2
- C6 -
4IIB
17
BGL1_ASPAC
A:
[3-841]
L
A
F
S
P
P
F
Y
PS
P
W
A
N
GQGEW
A
E
A
Y
Q
R
A
V
A
I
V
S
Q
MT
L
D
E
K
V
N
L
T
T
GTGWELEKCVGQTGGVPRLNIGG
M
C
L
Q
D
S
PLGIRDSDY
N
S
A
F
P
A
G
V
N
V
A
A
T
WD
K
N
L
A
Y
L
R
G
Q
A
M
G
Q
E
F
S
D
K
GIDVQLGPAAGPLGRSPDGGRNWE
G
F
S
PD
P
A
L
T
G
V
L
F
A
E
T
I
K
G
I
Q
D
A
G
V
V
A
T
A
K
HYILNEQEHFRQ
V
A
E
A
A
G
Y
GFNISD
T
I
S
S
N
V
D
D
K
T
I
H
E
MYL
W
P
F
A
D
A
V
R
A
GVG
A
I
M
C
S
YNQINNSYGCQNSYTLNKLLKAELGFQ
G
F
V
M
S
D
WGAHHSG
V
G
S
A
L
A
GLDMSMPGDITFDSATSFWG
T
N
L
T
I
A
V
L
N
GTVP
Q
W
R
V
D
D
M
A
V
R
I
M
A
A
Y
Y
K
V
GRDRLYQPPNFSSWTRDEYGFKYFYPQEGPYEKVNHFVNVQRNH
S
E
V
I
R
K
L
G
A
D
S
TVLLKNNNALPLTGKER
K
V
A
I
L
G
EDAGSNSYGANGCSDRGCDNGTLA
M
A
W
G
SG
T
A
E
F
P
Y
L
V
T
P
E
Q
A
I
Q
A
E
V
L
K
H
K
G
S
V
Y
A
I
TDNWA
L
S
Q
V
E
T
L
A
K
Q
AS
V
S
L
V
F
V
N
S
D
A
G
EGYISVDGNEGDRNNLTLWKN
G
D
N
L
I
K
A
A
A
N
N
CNN
T
I
V
V
I
H
S
VGPVLVDEWYDHPNVT
A
I
L
W
AGLPGQE
S
G
N
S
L
A
D
V
L
Y
GRVNPGAKSP
F
T
W
G
KTREAYGDYLVRELNNGNGA
P
Q
D
D
FSEGVFID
Y
R
G
F
D
K
R
NETP
I
Y
E
F
G
H
G
L
S
Y
T
T
F
N
Y
S
G
----
L
H
I
Q
V
L
N
A
V
A
T
E
T
G
---------
A
--
A
P
T
F
---
G
Q
V
G
N
A
S
D
Y
-----
V
Y
P
E
G
L
T
R
I
-
S
K
F
I
---------------
Y
P
W
L
N
S
--
T
D
L
K
A
S
S
--------------
G
D
P
Y
Y
G
--------
V
D
--
T
A
E
H
V
P
E
-----
G
A
T
D
G
S
----
P
Q
P
V
L
P
A
-
G
-
G
G
S
G
G
---------------
N
P
---
R
L
Y
---------------------------------------------
D
E
L
I
R
V
S
V
T
V
K
N
T
-
G
R
-----
V
A
G
D
A
V
P
Q
L
Y
V
S
L
G
G
P
N
E
P
K
V
V
-
L
R
K
-
F
D
R
L
T
L
K
PS
E
E
T
V
W
T
T
T
L
T
RRDLSNWDVAAQDWVITSY
P
K
K
V
H
V
G
SSSRQLP
L
H
A
A
L
P
KVQ------------------------------------------------
30
Fugue
60.95
16%
-25
- C1 -
1X9L
1
?
A:
[1-149]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
G
H
T
M
P
A
H
T
P
P
A
Q
T
A
P
A
----
A
---------
Q
K
A
G
----
A
Q
A
L
P
V
--
T
V
Q
G
---
A
T
V
A
A
V
P
P
------------------------
S
I
--
R
D
T
A
--
A
Y
M
T
L
T
N
--
K
S
D
Q
P
I
K
L
----
V
--
G
--
A
A
T
P
L
A
T
S
P
--------
M
L
--
M
T
T
T
H
S
G
-----
G
M
A
G
M
K
----
M
V
P
W
L
T
I
-
P
A
R
G
--------------------------------
T
L
T
L
Q
R
D
G
-
D
H
V
M
-
L
M
G
L
-
K
R
P
L
K
V
G
------------------
E
T
V
N
I
T
L
K
-
A
T
-----
D
G
R
T
L
N
V
A
A
T
V
K
-
K
-
N
I
E
G
R
--------------------------------------------------------------------------------------------------------------------
32
Fugue
60.03
9%
-22
- C4 -
1AFR
2
STAD_RICCO
A:
[1-345]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MPPREVHVQVTHSMPPQK
I
E
I
F
K
S
L
D
N
W
A
E
E
NILVHLKP
V
E
K
C
W
Q
P
Q
D
F
L
P
D
P
A
S
D
----
G
F
D
E
Q
V
R
E
L
R
E
R
A
K
----
E
I
P
D
D
Y
F
V
V
L
V
G
---
D
M
I
T
E
E
A
L
P
-----
T
Y
Q
T
M
L
N
T
L
-
D
G
V
R
D
E
T
G
A
S
--
P
T
S
W
--
A
I
W
T
R
A
W
--
T
A
E
E
N
R
H
G
-------------
D
L
L
N
K
Y
--------
L
Y
--
L
S
G
R
V
D
M
-----
R
Q
I
E
K
T
----
I
Q
Y
L
I
G
S
-
G
M
D
P
-
R
T
---------------
E
N
---
S
P
Y
L
G
F
--
I
Y
T
S
F
Q
E
R
A
-
T
F
I
S
-
H
G
N
T
-
A
R
Q
A
K
E
H
G
------------
D
I
K
L
A
Q
I
C
G
T
I
A
A
-
D
E
-----
K
R
H
E
T
A
Y
T
K
I
V
E
K
L
-
F
E
I
D
P
D
G
T
V
L
A
-
F
A
D
M
M
R
K
KISMPAHLMYDGRDDN
L
F
D
H
F
S
A
V
A
Q
R
L
GVYT
A
K
D
Y
A
D
I
L
E
F
L
V
G
R
W
KVDKLTGLS
A
E
G
Q
K
A
Q
D
Y
V
C
R
L
P
P
R
I
R
R
L
E
E
RAQGRAKE
A
P
T
M
P
F
SWIFD
R
Q
V
K
L
33
Fugue
59.14
21%
-40
* C6 *
1O9W
1
F17AG_ECOLX
A:
[1-176]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
A
V
S
F
I
G
S
T
E
N
D
V
G
-------------
P
S
L
---
G
S
Y
S
R
L
P
F
V
-----
Y
D
T
R
N
K
I
G
Y
Q
N
A
N
V
W
H
I
S
K
G
F
C
V
G
L
D
--
G
K
V
D
L
P
V
VG
S
L
D
G
Q
S
I
Y
----
G
LT
E
E
V
G
L
L
I
W
M
G
D
--------------
T
K
Y
S
R
G
-----
T
A
M
S
G
N
----
S
W
E
N
V
F
S
-
G
---------------------------
W
C
V
G
A
--
N
T
A
S
T
Q
G
L
S
-
V
R
V
T
-
P
V
I
L
-
K
R
N
S
A
R
Y
S
V
Q
----
K
--
T
S
I
G
S
I
R
M
R
P
Y
N
G
S
S
A
-
G
S
-----
V
Q
T
T
V
N
F
S
L
N
---------
P
F
T
-
L
N
D
--------------------------------------------------------------------------------------------------------------
13
HHSearch
58.16
11%
-70
- C8 -
5D9R
-
ARC6_ARATH
A:
[677-799]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
R
T
A
E
N
I
--------
V
S
--
K
W
Q
K
I
K
S
-----
L
A
F
G
P
D
HR--
I
E
M
L
P
E
V
-
L
D
G
R
M
L
K
---------------
I
W
---
T
D
R
A
A
E
--
T
A
Q
L
G
L
V
Y
D
-
Y
T
L
L
K
L
S
V
D
-
S
V
T
V
S
A
-
D
-
G
-------
T
R
A
L
V
E
A
T
L
E
E
S
A
C
L
S
D
L
V
HPEN
N
A
T
D
V
R
T
Y
T
T
R
Y
E
V
F
-
W
S
K
S
G
W
K
-
I
T
E
-
G
S
V
L
---------------------------------------------------------------------------------------------------------
37
Fugue
56.82
13%
-30
- C3 -
3PVT
2
PAAA_ECOLI
A:
[1-304]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MRS
T
Q
E
E
R
F
E
Q
R
I
A
Q
ETAIEPQDWMP
D
A
Y
R
K
T
L
I
R
Q
I
G
Q
H
A
H
S
E
I
V
G
M
L
P
E
G
N
W
I
TRAPT
L
R
R
K
A
I
L
L
A
K
V
Q
D
E
A
G
H
G
L
----
Y
L
Y
S
A
A
E
T
L
G
C
A
R
E
----
D
I
Y
Q
K
M
--
L
D
G
R
MKY
S
S
I
F
N
Y
P
T
L
S
W
A
D
I
G
V
I
G
W
L
V
D
G
-
A
A
I
V
N
Q
V
A
L
C
--
R
T
S
Y
--
G
P
Y
A
R
A
M
--
V
K
I
C
K
E
E
S
----
F
--
H
Q
R
Q
G
F
E
A
C
M
A
L
--------
A
Q
--
G
S
E
A
Q
K
Q
-----
M
L
Q
D
A
I
N
R
F
W
W
P
A
L
M
M
F
-
G
P
N
D
D
N
S
PN
S
A
R
S
L
T
W
KIKRFT
N
D
---
E
L
R
Q
R
F
--
V
D
N
T
V
P
Q
V
E
M
L
G
M
T
-
V
P
D
P
-
D
L
H
F
D
T
E
S
-
G
----
H
--
Y
R
F
G
E
I
D
W
Q
E
F
N
E
V
I
N
-
G
R
-----
G
I
C
N
Q
E
R
L
D
A
K
R
K
A
-
W
E
E
G
T
W
V
-
R
E
A
-
A
L
A
H
A
Q
K------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
55.84
32%
-58
- C2 -
1EZW
-
MER_METKA
A:
[233-309]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
I
D
----
K
--
D
E
D
K
A
I
E
A
T
K
I
V
--------
V
A
F
I
V
M
G
S
P
D
V
V
L
E
R
H
G
I
D
T
E
K
----
A
E
Q
I
A
E
A
I
G
K
G
D
F
G
T
---------------
A
I
---
G
L
V
D
E
D
--
M
I
E
A
F
S
I
A
G
-
D
P
D
T
-
V
V
D
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
HHSearch
50.82
12%
-21
* C5 *
5CNL
7
?
A:
[4-116]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
R
A
Q
L
A
V
W
A
N
E
A
--------
I
I
--
A
T
Y
T
F
D
Y
-----
K
N
Y
M
Q
Q
----
Q
K
E
I
A
K
Y
-
F
S
A
D
G
W
I
---------------
A
Y
---
S
K
A
L
N
Q
S
K
L
P
E
V
V
Q
K
N
A
-
Y
F
V
N
-
A
V
A
T
-
E
P
P
K
L
I
T
L
-
D
----
P
--
T
H
W
Q
A
I
M
P
I
L
V
V
Y
K
N
P
-
Q
Y
------
E
Q
K
Q
N
L
K
V
V
L
G
F
T
-
V
A
S
P
---------------------------------------------------------------------------------------------------------------------
11
HHSearch
50.68
14%
-38
- C5 -
3WZ4
4
?
A:
[6-121]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
D
S
A
V
L
Q
W
A
N
Q
A
--------
A
I
--
A
A
F
T
Y
N
F
-----
V
N
Y
R
D
E
----
L
Q
A
S
S
G
F
-
F
T
A
E
G
W
D
---------------
Q
F
---
L
G
A
L
E
Q
S
N
N
L
D
A
V
K
A
K
K
-
L
V
V
S
-
A
V
A
T
-
R
A
P
I
I
L
Q
K
-
G
VLNG
R
--
Y
S
W
R
V
Q
M
P
I
L
V
T
Y
Q
S
A
-
S
E
------
F
T
Q
Q
N
N
V
V
T
M
L
I
T
-
R
V
S
----------------------------------------------------------------------------------------------------------------------
23
HHSearch
45.44
9%
-45
- C8 -
3A76
2
LINA_SPHPI
A:
[107-151]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
V
N
G
I
G
D
V
L
L
L
G
N
L
V
E
G
N
-----
Q
S
I
L
I
A
A
V
F
T
D
E
Y
E
-
R
R
D
G
V
W
K
-
F
S
K
-
R
N
A
----------------------------------------------------------------------------------------------------------
29
HHSearch
43.08
16%
-32
- C8 -
2GBW
-
?
B:
[114-158]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
G
E
L
D
V
L
S
N
I
L
V
Y
R
N
R
R
-
Q
T
-----
E
V
T
V
H
T
L
G
R
E
D
K
L
R
-
R
D
G
N
G
F
K
-
V
F
R
-
R
K
L
----------------------------------------------------------------------------------------------------------
12
HHSearch
42.48
10%
-9
- C5 -
3WZ3
1
?
A:
[6-123]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
Q
N
D
A
M
A
F
G
S
Q
A
--------
L
A
--
T
A
F
N
L
D
F
-----
V
H
Y
R
S
Q
----
I
S
S
L
S
P
R
-
F
S
D
E
G
F
A
---------------
G
Y
---
V
N
A
L
Q
A
S
N
I
L
E
T
I
K
K
E
K
-
M
N
L
T
-
A
T
-
T
-
G
A
G
V
L
V
R
Q
-
G
Q
M
S-
D
G
V
W
F
W
T
F
Q
Y
P
V
R
M
R
L
V
G
Q
-
T
T
-----
S
K
P
E
Q
S
F
V
F
E
I
T
I
Q
-
R
V
D
P
---------------------------------------------------------------------------------------------------------------------
36
Fugue
41.69
13%
-4
- C5 -
1B24
-
DMO1_DESMO
A:
[7-99]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
V
-----
S
G
I
S
A
Y
----
L
L
G
L
I
I
G
-
D
G
G
L
Y
K
L
---------------
K
Y
KGN
R
S
E
Y
R
V
--
V
I
T
Q
K
S
E
N
L
-
I
K
Q
H
-
I
A
P
L
M
Q
F
L
I
D
E
L
N
-
V
----
K
--
S
K
I
Q
I
V
K
G
-------------------
D
T
R
Y
E
L
R
V
S
---
S
K
K
L
Y
Y
Y
-
F
A
N
M
L
E
R
I
R
--------------------------------------------------------------------------------------------------------
22
HHSearch
40.09
14%
-55
- C8 -
3B8L
2
?
A:
[106-148]
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
A
S
M
R
A
Y
V
I
G
M
G
V
G
K
-
D
G
-----
R
A
V
T
V
N
G
R
Y
F
F
E
V
R
-
R
T
E
K
G
W
K
-
A
T
R
-
Y
T
-----------------------------------------------------------------------------------------------------------
19
HHSearch
39.67
13%
-39
- C8 -
3EBY
-
?
A:
[103-148]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
Q
V
S
A
E
A
S
Y
V
V
F
Q
T
R
N
-
D
G
E----
T
R
I
Y
N
A
G
K
Y
V
D
R
F
D
-
L
S
G
G
T
V
R
-
L
K
S
-
R
T
C
----------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
33.78
34%
-21
- C5 -
3PJU
1
?
A:
[132-174]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
I
G
E
E
Q
--
L
P
E
Q
---
A
V
L
E
Q
L
T
R
R
-----
L
R
E
---
L
G
F
-
S
L
S
L
Q
R
F
G
G
R
--
F
S
M
I
--
G
N
L
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
4
PsiBlast_PDB
33.75
34%
-22
- C5 -
3PJX
1
?
A:
[313-355]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
E
I
G
E
E
Q
--
L
P
E
Q
---
A
V
L
E
Q
L
T
R
R
-----
L
R
E
---
L
G
F
-
S
L
S
L
Q
R
F
G
G
R
--
F
S
M
I
--
G
N
L
A
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
9
PsiBlast_PDB
33.53
28%
-8
- C7 -
3KRT
-
?
A:
[2-53]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
S
L
T
----
V
K
D
I
L
D
A
-
I
Q
S
P
D
S
T
---------------
P
A
---
D
I
A
A
L
P
--
L
P
E
S
Y
R
A
I
T
-
V
H
K
D
-
E
T
E
M
-
F
A
G
L
E
T
R
D
-
K
----
D
------------------------------------------------------------------------------------------------------------------------------------------------------------------
8
PsiBlast_PDB
32.41
38%
33
- C5 -
3V8E
1
PNC1_YEAST
A:
[143-184]
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
T
D
M
-
N
K
Y
L
E
K
H
H
-
T
----
D
--
E
V
Y
I
V
G
V
A
L
E
Y
-
V
K
A
T
-
A
I
-----
S
A
A
E
L
G
Y
K
T
T
V
-----------------------------------------------------------------------------------------------------------------------------