@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Rv0576: (2016-04-23 )
MLEVAAEPTRRRLLQLLAPGERTVTQLASQFTVTRSAISQHLGMLAEAGLVTARKQGRERYYRLDERGVLRLRALMESFWSDELDRLVADAAHYPPSQGDCAMPFEKAVVVPLDPTSTFALITQPDRLRRWMAVAARIELRTGGAYRWTVTPGHSAAGTVIDVDPGKRVVFTWGWEDHGDPPPGGSTVTITLTPVDGGTEVRLVHDGLTAQQAARHAKGWNHFLDRLVVAGQRGDAGPDEWAAAPDPLDELSCAEATLAVLQHVLRGIGASDLTRQTPCTEYDVSQLADHLLRSLAIIGAAAGAQLAPRDVDAPLETQVADAAQAVMEAWRRRGLAGTVELNSNQVPATVPVGILCLEFLVHAWDFAIATGSQVIASEPVSEYVLAVAGKVITPATRNSAGFAAPAAVGSFAPVLDRLIAFTGRQPTAGHVSAT
Atome Classification :
(20 SA)
.........10........20........30........40........50........60........70........80........90.-.......100.......110.......120.......130...-------.--------..-.140.......150--.-----.---....-.160.......170.......180.---....--....190...-.-...200......-.-------------210-.---------------.--.......220.....-...-230......--.240.......250.......260.......270.......280.......290.......300.......310.......320.......330.......340.......350.......360.......370.......380.......390.......400.......410.......420.......430..
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MLEVAA
E
P
T
R
R
R
L
L
Q
L
LAPG
E
R
T
V
T
Q
L
A
S
Q
F
T
V
T
R
S
A
I
S
Q
H
L
G
M
L
A
E
A
G
L
V
T
A
R
K
Q
G
R
E
R
YYRLDER
G
V
L
R
L
R
A
L
M
E
S
F
W
S
D
E
L
D
R
L
V
A
D
AA-HYPPSQGDCAMPFE
K
A
V
V
V
PLDPTS
T
F
A
L
ITQ
P
D
R
L
R
R
W
M
A
V
A
-------
A
--------
R
I
-
E
L
RTGG
A
Y
R
W
T
VTP--G-----H---SAA
G
-
T
V
I
DVDPG
K
R
V
V
F
TWGWEDHGD--P---PPGG--
S
T
V
T
I
T
L
T
PV-D-GG
T
E
V
R
L
V
HDGL-
T
-------------
A
---
Q
---------------
Q
--
A
A
R
HAK
G
W
N
-
H
F
L
D
R
-
L
V
V-AGQRGDAG
P
--
D
EWAAAPD
P
L
D
E
L
S
C
A
E
A
T
L
A
V
L
Q
H
V
L
R
GI
G
A
S
D
LTRQTPCTEY
D
V
S
Q
L
A
D
H
L
L
R
S
L
A
I
I
GAAAGAQLAPRDVDA
P
L
E
T
Q
V
A
D
A
A
Q
A
V
M
E
A
W
R
RRG
L
A
G
T
V
E
LNSNQVPATV
P
V
G
I
L
C
L
E
F
L
V
H
A
W
D
F
AIATG
S
Q
V
IASE
P
V
S
E
Y
V
L
A
VAG
K
V
ITPATRNSAGFAA
P
A
A
VG
S
F
A
P
V
L
D
R
L
I
A
FTGRQPTAGHVSAT
1
PsiBlast_PDB
79.81
68%
-95
- C2 -
3F6V
-
?
A:
[30-121]
-
L
E
V
A
A
E
P
T
R
R
R
L
V
Q
L
L
T
S
G
E
Q
T
V
N
N
L
A
A
H
F
P
A
S
R
S
A
I
S
Q
H
L
R
V
L
T
E
A
G
L
V
T
P
R
K
D
G
R
F
R
Y
Y
R
L
D
P
Q
G
L
A
Q
L
R
A
L
F
D
S
F
W
I
D
E
L
D
R
L
V
A
D
A
T
-
E
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
53
Fugue
79.76
32%
-52
- C1 -
2LAK
-
?
A:
[1-160]
-----------------------------------------------------------------------------------------------
M
E
K
A
M
P
E
S
F
V
V
R
R
E
A
H
L
A
A
P
P
A
A
V
F
A
L
M
T
D
P
E
K
I
L
R
W
M
G
T
E
-------
A
--------
E
V
-
E
P
E
P
G
G
L
Y
L
V
N
V
T
G
--
A
-----
R
---
F
A
R
G
-
S
F
R
E
V
V
P
V
H
R
L
A
Y
S
F
G
W
D
G
S
E
V
--
V
---
P
P
G
S
--
S
L
V
E
I
D
L
I
E
Q
-
G
-
G
G
T
L
L
R
L
T
H
S
G
L
P
S
-------------
A
---
E
---------------
Q
--
C
A
G
H
E
E
G
W
A
-
H
Y
L
G
R
-
L
T
E
-
V
A
A
G
R
D
P
G
P
--
D
P
F
Y
G
R
R
L
E
H
H
H
H
H
H
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
2
PsiBlast_PDB
71.75
41%
-49
- C1 -
2LAK
-
?
A:
[21-146]
-------------------------------------------------------------------------------------------------------------------
P
A
A
V
F
A
L
M
T
D
P
E
K
I
L
R
W
M
G
T
E
-------
A
--------
E
V
-
E
P
E
P
G
G
L
Y
L
V
N
V
T
G
--
A
-----
R
---
F
A
R
G
-
S
F
R
E
V
V
P
V
H
R
L
A
Y
S
F
G
W
D
G
S
E
V
--
V
---
P
P
G
S
--
S
L
V
E
I
D
L
I
E
Q
-
G
-
G
G
T
L
L
R
L
T
H
S
G
L
P
S
-------------
A
---
E
---------------
Q
--
C
A
G
H
E
E
G
W
A
-
H
Y
L
G
R
-
L
T
E
-
V
A
A
G
R
D
P
G
P
--
D
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
HHSearch
69.38
20%
-82
- C1 -
2LGH
-
?
A:
[2-141]
--------------------------------------------------------------------------------------------------------
K
I
S
I
E
A
H
I
E
Q
E
I
E
A
V
W
W
A
W
N
D
P
D
C
I
A
R
W
N
A
A
S
-------
S
DWHTTGS-
R
V
-
D
L
V
V
G
G
R
F
C
H
H
M
A
A
--
K
DGS
A
G
F
---
D
F
T
G
-
T
F
T
R
V
E
A
P
T
R
L
S
F
V
M
D
D
G
----------------
R
E
V
D
V
Q
F
A
S
E
-
P
-
G
G
T
W
V
Q
E
T
F
D
A
E
-
T
-------------
S
---
H
---------------
T
--
P
A
Q
Q
Q
A
G
W
Q
-
G
I
L
D
N
-
F
K
R
Y
V
-
E
A
A
G
L
E
H
--
H
H
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
59
Fugue
67.97
15%
-49
- C1 -
2NN5
3
?
A:
[14-184]
---------------------------------------------------------------------------------
G
T
E
N
L
Y
F
Q
S
N
A
M
K
D
T
F
R
L
E
N
Q
T
I
Y
F
G
T
E
R
A
I
S
A
S
P
Q
T
I
W
R
Y
L
T
E
T
D
K
L
K
Q
W
F
P
E
L
-------
E
--------
I
G
-
E
L
G
V
N
G
F
W
R
F
I
L
P
D
--
F
-----
E
---
E
--
T
M
P
F
T
D
Y
A
E
E
K
Y
L
G
V
T
W
D
---------------
T
--
G
I
I
Y
F
D
L
K
E
Q
A
P
-
H
Q
T
L
L
V
F
S
E
S
L
P
-
E
NF-----------
T
---
T
---------------
P
--
R
H
K
D
I
A
G
W
S
-
I
V
L
N
R
-
L
K
Q
-
V
V
E
T
P
D
A
A
P
EK
I
D
F
P
Q
I
E
N
H
Y
L
E
K
L
T
N
L
E
N
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34
HHSearch
66.41
24%
-43
- C1 -
3ELI
-
?
A:
[2-145]
-------------------------------------------------------------------------------------------------------
A
D
L
R
L
E
R
E
F
A
V
A
P
E
A
L
F
A
W
V
S
D
G
A
K
L
L
Q
W
W
G
P
E
-------
G
L
H
V
P
ADQH
D
L
-
D
F
T
R
L
G
P
W
F
S
V
M
V
N
--
G
EG
Q
R
-
Y
---
K
V
S
G
-
Q
V
T
H
V
K
P
P
Q
S
V
G
F
T
W
G
W
H
D
D
D
D
--
R
---
R
G
A
E
--
S
H
V
M
F
I
V
E
P
C
----
G
A
R
L
I
L
D
H
R
E
L
-
G
-------------
D
---
D
E
--------------
M
--
S
L
R
H
E
E
G
W
T
-
S
S
L
R
K
-
L
A
A
E
L
-
A
L
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
39
HHSearch
66.19
22%
-66
- C1 -
2LCG
-
?
A:
[2-137]
--------------------------------------------------------------------------------------------------------
N
I
T
V
E
T
T
V
A
A
P
V
G
K
V
W
R
A
Y
T
T
P
E
D
I
K
Q
W
N
A
A
S
DDWHTT
A
A
--------
T
V
-
D
L
R
E
G
G
A
F
S
S
R
M
E
A
KD
G
S
M
G
--
F
---
D
F
A
G
-
T
Y
T
K
V
V
E
N
K
R
I
E
Y
A
F
G
D
-----------------
R
T
A
K
V
E
F
L
E
A
-
P
-
Q
G
V
T
V
R
V
S
F
V
A
E
-
T
-------------
E
---
Y
---------------
P
--
V
E
Q
Q
Q
Q
G
W
Q
-
A
I
L
N
N
-
F
K
R
H
V
-
E
S
H
L
E
H
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
55
Fugue
65.47
20%
-58
- C1 -
1X53
-
A:
[1-145]
---------------------------------------------------------------------------------------------
G
S
S
G
S
S
G
I
P
T
C
K
I
T
L
K
E
T
F
L
T
S
P
E
E
L
Y
R
V
F
T
T
Q
E
L
V
Q
A
F
T
H
A
P
-------
A
--------
T
L
-
E
A
D
R
G
G
K
F
H
M
V
-----
D
-----
G
---
N
V
S
G
-
E
F
T
D
L
V
P
E
K
H
I
V
M
K
W
R
F
K
S
W
----
P
---
E
G
H
F
--
A
T
I
T
L
T
F
I
D
K
-
N
-
G
E
T
E
L
C
M
E
G
R
G
I
-
P
-------------
A
---
P
---------------
E
--
E
E
R
T
R
Q
G
W
Q
R
Y
Y
F
E
G
-
I
K
Q
-
T
F
G
Y
G
A
S
G
P
--
S
S
G
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
49
HHSearch
64.95
18%
-66
- C1 -
2LEQ
-
?
A:
[4-144]
------------------------------------------------------------------------------------------------------
K
L
I
A
Q
V
K
T
V
I
N
A
P
I
E
K
V
W
E
A
L
V
N
P
E
I
I
K
E
Y
M
F
G
T
T
------
V
--------
V
S
-
D
W
K
E
G
S
Q
I
V
W
K
G
E
W
--
K
-----
G
K
A
Y
E
D
K
G
-
T
I
L
Q
F
N
E
R
S
I
L
Q
Y
S
H
F
S
P
L
T
G
K
PD
L
---
P
E
N
Y
--
H
V
V
T
I
T
L
T
A
L
-
K
-
K
G
V
E
V
E
L
T
Q
D
N
N
-
E
-------------
T
---
E
K
--------------
E
--
Q
K
H
S
E
D
N
W
N
-
T
M
L
E
G
-
L
K
K
F
L
-
E
N
K
V
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
45
HHSearch
64.30
19%
-68
- C1 -
3PUT
1
?
A:
[6-154]
----------------------------------------------------------------------------------------------------
A
E
H
T
T
F
V
I
E
R
R
L
T
A
P
V
A
R
V
F
R
A
W
S
T
P
E
S
K
R
Q
W
F
A
C
H
VPL
E
---
Y
--------
A
L
-
D
F
R
P
G
G
T
E
R
N
Y
T
A
D
TD
G
L
L
---
H
---
A
Y
D
A
-
R
Y
I
D
I
V
P
D
T
R
I
I
Y
A
Y
E
M
K
L
G
Q
---
T
---
R
I
S
A
--
S
L
V
T
V
A
F
D
V
E
-
P
-
S
G
T
R
M
V
F
T
E
Q
V
V
-
F
-------------
L
D--
G
---------------
Y
GD
N
G
A
R
L
Q
G
T
E
-
I
G
L
D
N
-
L
E
L
F
L
-
V
R
E
T
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37
HHSearch
64.06
16%
-80
- C1 -
2IL5
1
?
A:
[10-169]
---------------------------------------------------------------------------------------------------
E
N
E
H
V
E
V
E
I
E
K
L
Y
K
F
S
P
E
L
V
Y
E
A
W
T
K
K
D
L
L
K
Q
W
F
M
T
S
ARTNK
E
-
I
--------
E
A
-
D
V
K
E
G
G
K
Y
R
I
V
D
Q
Q
R
N
G
K
V
---
N
---
V
I
E
G
-
I
Y
E
S
L
V
M
D
E
Y
V
K
M
T
I
G
M
P
--
S
--------
E
T
Q
--
D
V
I
E
V
E
F
F
E
R
-
E
T
G
G
T
Q
M
L
F
Y
Y
R
S
L
-
V
-------------
E
---
K
E
R
RFT
N
L
E
Y
K
Q
K
K
K
E
Y
--
H
D
A
M
V
H
G
F
E
-
L
M
F
D
K
-
M
Y
H
V
I
-
E
T
S
T
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
62
Fugue
61.35
17%
-70
- C1 -
2LEQ
-
?
A:
[1-146]
---------------------------------------------------------------------------------------------------
M
E
I
K
L
I
A
Q
V
K
T
V
I
N
A
P
I
E
K
V
W
E
A
L
V
N
P
E
I
I
K
E
Y
M
F
G
T
-------
T
--------
V
V
S
D
W
K
E
G
S
Q
I
V
W
K
G
E
W
--
K
G
K
A
--
Y
---
E
D
K
G
-
T
I
L
Q
F
N
E
R
S
I
L
Q
Y
S
H
F
S
P
L
T
G
K
--
P
---
D
L
P
E
N
Y
H
V
V
T
I
T
L
T
A
L
-
K
-
K
G
V
E
V
E
L
T
Q
D
N
N
E
T
-------------
E
---
K
---------------
E
--
Q
K
H
S
E
D
N
W
N
-
T
M
L
E
G
-
L
K
K
-
F
L
E
N
K
V
S
A
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
57
Fugue
61.00
17%
-67
- C1 -
1XN6
-
?
A:
[1-143]
------------------------------------------------------------------------------------------------
M
E
Q
Q
N
T
L
N
D
I
K
Q
T
I
V
F
N
A
S
I
Q
K
V
W
S
V
V
S
T
A
E
G
I
A
S
W
F
M
-
P
-------
N
--------
D
F
-
V
L
E
V
G
H
E
F
H
V
Q
S
P
F
--
G
---------
P
S
P
C
-
K
V
L
E
I
D
E
P
N
H
L
S
F
S
W
D
T
D
-------------
G
--
W
V
V
S
F
D
L
K
D
L
G
D
-
N
K
T
E
F
T
L
I
H
G
G
W
-
K
HPD
E
I
L
P
KANAK
S
S
---
I
---------------
I
--
R
D
R
M
S
G
G
W
V
-
A
I
V
N
E
-
K
L
K
-
K
V
V
E
G
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
42
HHSearch
60.23
21%
-66
- C1 -
3RD6
-
?
A:
[3-149]
--------------------------------------------------------------------------------------------------
H
S
V
I
H
S
T
F
T
I
E
R
T
Y
P
Q
S
P
D
R
V
F
H
A
F
A
D
K
A
T
V
R
R
W
R
V
D
G
DGA
E
---
F
--------
S
F
-
D
F
R
V
G
G
G
E
V
S
R
F
S
Y
GG
G
P
E
---
V
---
R
L
D
A
-
Q
F
Q
D
I
V
P
D
Q
R
I
V
F
S
Y
R
M
A
I
G
P
---
Q
---
P
M
S
A
--
S
L
T
T
V
E
L
T
P
S
-
G
-
D
G
T
R
L
T
Y
T
E
Q
G
A
-
F
-------------
F
DGV
D
---------------
S
--
A
K
G
R
E
E
G
T
R
-
G
L
L
E
A
-
L
A
A
E
L
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
47
HHSearch
59.18
18%
-70
- C1 -
2M89
-
?
A:
[1-133]
------------------------------------------------------------------------------------------------------
M
V
N
I
N
H
R
I
G
I
K
A
S
P
E
K
I
Y
Q
A
L
T
T
D
D
G
L
K
K
W
W
T
N
D
-------
I
--------
S
G
-
A
G
V
V
G
S
T
I
K
F
R
F
N
G
--------
G
---
G
P
D
F
-
K
V
T
K
L
I
P
N
K
T
V
C
W
Q
H
A
G
N
M
P
E
-------
S
W
M
G
--
T
E
I
S
F
Q
L
E
T
V
-
E
-
N
Q
T
F
V
R
F
T
H
S
N
W
-
H
-------------
E
---
T
T
D
-------------
F
--
M
A
H
C
N
T
K
W
A
-
V
F
L
L
S
-
L
K
D
A
L
-
E
I
G
K
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
60
Fugue
58.78
18%
-63
* C1 *
2M89
-
?
A:
[1-134]
------------------------------------------------------------------------------------------------------
M
V
N
I
N
H
R
I
G
I
K
A
S
P
E
K
I
Y
Q
A
L
T
T
D
D
G
L
K
K
W
W
T
N
D
-------
I
--------
S
G
-
A
G
V
V
G
S
T
I
K
F
R
-
F
N
--
G
-----
G
---
G
P
D
F
-
K
V
T
K
L
I
P
N
K
T
V
C
W
Q
H
A
--
G
N
M
P
--
E
---
S
W
M
G
--
T
E
I
S
F
Q
L
E
T
V
-
E
-
N
Q
T
F
V
R
F
T
H
S
N
W
-
H
-------------
E
TT-
D
---------------
F
--
M
A
H
C
N
T
K
W
A
-
V
F
L
L
S
-
L
K
D
-
A
L
E
I
G
K
G
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
51
HHSearch
58.50
20%
-67
- C1 -
1X53
-
A:
[7-142]
---------------------------------------------------------------------------------------------------
G
I
P
T
C
K
I
T
L
K
E
T
F
L
T
S
P
E
E
L
Y
R
V
F
T
T
Q
E
L
V
Q
A
F
T
H
A
P
-------
A
--------
T
L
-
E
A
D
R
G
G
K
F
H
M
V
D
----------
G
---
N
V
S
G
-
E
F
T
D
L
V
P
E
K
H
I
V
M
K
W
R
F
K
S
W
P
-------
E
G
H
F
--
A
T
I
T
L
T
F
I
D
K
-
N
-
G
E
T
E
L
C
M
E
G
R
G
I
-
P
-------------
A
---
P
---------------
E
--
E
E
R
T
R
Q
G
W
Q
-
R
Y
Y
F
E
G
I
K
Q
T
F
-
G
Y
G
A
S
G
P
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
52
HHSearch
57.18
16%
-77
- C1 -
2LDK
-
?
A:
[8-167]
---------------------------------------------------------------------------------------------------
D
V
E
A
L
S
F
S
I
V
A
E
F
D
A
D
V
K
R
V
W
A
I
W
E
D
P
R
Q
L
E
R
W
W
G
P
P
T
W
P
A
T
F
-
E
--------
T
H
-
E
F
T
V
G
G
K
A
A
Y
Y
M
T
G
PD
G
T
K
---
A
---
R
G
W
W
-
Q
F
T
T
I
E
A
P
D
H
L
E
F
D
D
G
F
A
D
E
H
G
--
A
PVD
E
L
G
V
--
T
H
A
T
V
K
L
E
P
L
-
E
-
N
R
T
R
M
T
I
I
S
T
-
F
-
E
-------------
S
E
--
E
Q
M
Q
K
M
----------
A
--
E
M
G
M
E
E
G
M
R
-
E
A
I
E
Q
-
I
D
A
V
L
-
S
E
P
A
N
A
L
--
E
H
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
32
PsiBlast_CBE
57.09
40%
-81
- C2 -
1R23
1
SMTB_SYNE7
A:
[42-118]
---
V
L
A
D
P
N
R
L
R
L
L
S
L
L
A
R
S
E
L
C
V
G
D
L
A
Q
A
I
G
V
S
E
S
A
V
S
H
Q
L
R
S
L
R
N
L
R
L
V
S
Y
R
K
Q
G
R
H
V
Y
Y
Q
L
Q
D
H
H
I
V
A
L
-------
Y
Q
N
A
L
D
H
L
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
31
PsiBlast_CBE
56.17
40%
-78
- C2 -
1R23
1
SMTB_SYNE7
B:
[42-118]
---
V
L
A
D
P
N
R
L
R
L
L
S
L
L
A
R
S
E
L
C
V
G
D
L
A
Q
A
I
G
V
S
E
S
A
V
S
H
Q
L
R
S
L
R
N
L
R
L
V
S
Y
R
K
Q
G
R
H
V
Y
Y
Q
L
Q
D
H
H
I
V
A
L
-------
Y
Q
N
A
L
D
H
L
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------