@TOME V2.3
(Nov 2016)
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Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
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Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
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Contacts with Ligands
Show alignment :
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Column output:
Score:
Atome Rank Value
Tools Score
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Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
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3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
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Prosite class
Pfam class
EC Number
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Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : Rv3903c: (2016-05-24 )
MAPLAVDPAALDSAGGAVVAAGAGLGAVISSLTAALAGCAGMAGDDPAGAVFGRSYDGSAAALVQAMSVARNGLCNLGDGVRMSAHNYSLAEAMSDVAGRAAPLPAPPPSGCVGVGAPPSAVGGGGGAPKGWGWVAPYIGMIWPNGDSTKLRAAAVAWRSAGTQFALTEIQSTAGPMGVIRAQQLPEAGLIESAFADAYASTTAVVGQCHQLAAQLDAYAARIDAVHAAVLDLLARICDPLTGIKEVWEFLTDQDEDEIQRIAHDIAVVVDQFSGEVDALAAEITAVVSHAEAVITAMADHAGKQWDRFLHSNPVGVVIDGTGQQLKGFGEEAFGMAKDSWDLGPLRASIDPFGWYRSWEEMLTGMAPLAGLGGENAPGVVESWKQFGKSLIHWDEWTTNPNEALGKTVFDAATLALPGGPLSKLGSKGRDILAGVRGLKERLEPTTPHLEPPATPPRPGPQPPRIEPPESGHPAPAPAAKPAPVPANGPLPHSPTESKPPPVDRPAEPVAPSSASAGQPRVSAATTPGTHVPHGLPQPGEHVPAQAPPATTLLGGPPVESAPATAHQPQWATTPAAPAAAPHSTPGGVHSTESGPHGRSLSAHGSEPTHDGASHGSGHGSGSEPPGLHAPHREQQLAMHSNEPAGEGWHRLSDEAVDPQYGEPLSRHWDFTDNPADRSRINPVVAQLMEDPNAPFGRDPQGQPYTQERYQERFNSVGPWGQQYSNFPPNNGAVPGTRIAYTNLEKFLSDYGPQLDRIGGDQGKYLAIMEHGRPASWEQRALHVTSLRDPYHAYTIDWLPEGWFIEVSEVAPGCGQPGGSIQVRIFDHQNEMRKVEELIRRGVLRQ
Atome Classification :
(20 SA)
.........10........20........30........--40........50........60........70........80........90........----100..-...-.--.110.....-..120---..-----.....130.......140.....--..-150.......160.......170....-------------.-.-.180...----....190....------...200.......210.......220.......230.......240.....-..250.......260----.......270..-----.....280.......290......--.300.......--310.......320.......330.......-----340-.......350.......360......-.370.......380.......390.......400.......410.......-420...--....430.......440.......450.......460.......470.......480.......490.......500.......510.......520.......530.......540.......550.......560.......570.......580.......590.......600.......610.......620.......630.......640.......650.......660.......670.......680.......690.......700.......710.......720.......730.......740.......750.......760.......770.......780.......790.......800.......810.......820.......830.......840....
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
MAPLAV
D
P
A
ALDSAG
G
A
V
V
AAG
A
G
L
G
A
V
I
S
S
L
T
A
A
L
A
GC--AGMAGDDP
A
G
A
VFGRSYD
G
S
A
A
A
L
V
Q
A
M
S
V
A
R
NGLCNLGDG
V
R
MSAHN
Y
S
L
A
E
A
M
S
D
V
AG----RAAPL-PAP-P--PSGCVGVGA-PPSAV---GG-----GGGAPKGWGWVA
P
Y
I
G
M
IWPNGD--ST-KL
R
A
A
A
V
A
W
RSAG
T
Q
F
A
L
T
E
I
QSTAGP-------------M-
G
-
V
I
R
A
Q
QL----PEAG
L
I
E
S
A
F
A
------
D
A
Y
A
S
T
T
A
V
V
G
Q
C
H
Q
L
A
A
Q
L
D
A
Y
A
A
R
I
D
A
V
H
A
A
V
L
D
L
L
A
R
ICDP
L
T
G
I
K
E
V
-
W
E
F
LTDQ
D
E
D
E
I
Q
R
I
----
A
H
D
I
A
V
V
V
D
Q
FS-----G
E
V
D
A
L
A
A
E
I
T
A
V
V
S
H
A
E
A
V
I
T
A
M
--
A
D
HA
G
K
Q
W
D
R
F
--
L
HSNP
V
G
V
V
IDGT
G
Q
Q
L
K
G
F
G
E
E
A
FGMAKD-----SWD-LGPLRASID
P
F
G
W
Y
R
S
W
E
E
M
L
TGMAP-LAGLGGENA
P
G
V
V
E
S
W
K
Q
F
G
K
S
LIHWDEWTTN
P
N
E
A
L
G
K
T
V
F
D
A
A
T
LALPG-
G
P
L
S
K
L--GSK
G
R
D
I
L
A
G
V
R
G
L
K
E
RLEPTTPHLEPPATPPRPGPQPPRIEPPESGHPAPAPAAKPAPVPANGPLPHSPTESKPPPVDRPAEPVAPSSASAGQPRVSAATTPGTHVPHGLPQPGEHVPAQAPPATTLLGGPPVESAPATAHQPQWATTPAAPAAAPHSTPGGVHSTESGPHGRSLSAHGSEPTHDGASHGSGHGSGSEPPGLHAP
H
R
E
Q
Q
L
AMHSNEPAGE
G
W
HRLSDEAVDPQYGE
P
L
S
RHWDFTDNPADRS
R
I
N
P
V
V
A
Q
L
M
EDPNAPFGRDPQGQP
Y
T
Q
E
R
Y
Q
E
R
FNSVGPW
G
Q
Q
YSNFPPNNGAVPGT
R
I
A
Y
T
N
L
E
K
F
L
S
D
YGPQLDRIGGDQG
K
Y
L
A
I
M
EHGRPAS
W
E
Q
R
A
L
H
V
TSLRDP
Y
H
A
Y
T
I
DWLPEG
W
F
I
E
V
S
EVAPGCGQPG
G
S
I
Q
V
R
I
FDH
Q
N
E
M
R
K
V
E
E
L
I
R
RGVLRQ
1
PsiBlast_PDB
89.89
100%
-68
- C1 -
4QLP
-
?
B:
[651-846]
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L
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Q
9
HHSearch
89.80
99%
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B:
[649-846]
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29
Fugue
89.52
98%
-67
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B:
[648-846]
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12
HHSearch
53.49
12%
-53
- C1 -
4XXX
3
ESPB_MYCTU
A:
[2-224]
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31
Fugue
51.11
12%
-46
- C1 -
3EDV
5
SPTB2_HUMAN
A:
[2-323]
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10
HHSearch
49.97
13%
-54
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ESPB_MYCTU
A:
[8-226]
----
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32
Fugue
49.59
9%
-39
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7
Y609_METJA
A:
[3-435]
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M
V
I
Y
L
F
V
I
L
S
H
Y
I
L
I
D
E
V
G
G
R
K
E
I
V
I
F
S
F
I
V
V
L
G
V
F
L
L
L
-
L
Y
Y
Q
W
I
T
N
R
F
V
F
Y
G
I
I
A
T
F
I
G
V
L
I
F
E
I
I
Y
R
K
V
T
K
R
T
F
S
N
N
M
Y
V
K
S
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
16
HHSearch
46.72
15%
-26
- C1 -
3GWK
1
?
C:
[3-93]
M
S
Q
I
K
L
T
P
E
E
L
R
S
S
A
Q
K
Y
T
A
G
S
Q
Q
V
T
E
V
L
N
L
L
T
Q
E
Q
A
V
I
--
D
E
N
W
D
G
S
T
-
F
D
S
F
E
A
Q
F
N
----
E
L
S
P
K
I
T
E
F
A
Q
L
L
E
D
I
N
Q
Q
L
L
K
V
A
D
I
I
E
Q
T
D
A
D
I
A
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
35
Fugue
46.33
8%
-40
- C1 -
3I9Y
-
?
A:
[50-317]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------
S
A
M
I
E
--
A
R
-
Q
V
S
E
L
S
T
R
I
I
S
S
V
Q
M
L
S
N
A
Q
N
E
Q
E
R
K
E
-------------
A
-
G
-
R
V
L
F
E
Q
L
----
E
S
L
L
T
H
I
K
E
L
G
G
E
SFD
S
K
L
L
D
A
L
E
S
N
V
Q
N
V
I
N
N
L
A
E
L
G
V
T
V
E
R
K
L
W
L
A
K
E
I
D
T
R
V
E
E
M
R
L
L
S
E
E
L
E
Q
L
T
R
T
L
D
L
T
E
R
L
H
E
L
H
L
L
----
A
F
K
M
L
N
Q
I
E
E
A
R
T
LTN
V
D
R
I
Q
Q
I
Q
T
A
F
E
N
N
L
K
I
M
K
R
R
V
L
A
V
ED
P
T
R
S
K
Q
M
S
Q
L
L
--
T
E
L
G
K
R
Q
V
V
F
T
I
L
L
Q
Q
Y
E
N
N
E
Q
S
Q
Q
L
M
Q
K
T
-----
L
E
L
-
F
S
E
L
N
S
T
V
N
K
L
V
D
D
S
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36
Fugue
45.85
3%
-58
- C2 -
1ALU
5
IL6_HUMAN
A:
[21-186]
-----------------------------------------------------------------------------------------------------------------------------------------------------------------
L
T
S
S
E
--
R
I
-
D
K
Q
I
R
Y
I
L
D
G
I
S
A
L
R
K
E
T
C
N
K
S
N
M
C
E
N
-------------
L
-
N
-
L
P
K
M
A
E
K
DGCF
Q
S
G
F
N
E
E
T
C
L
V
------
K
I
I
T
G
L
L
E
F
E
V
Y
L
E
Y
L
Q
N
R
F
E
S
S
E
E
Q
A
R
A
V
Q
M
S
T
K
V
L
I
Q
F
L
Q
K
K
A
K
N
L
D
A
I
-
T
T
P
D
P
T
T
N
A
S
L
L
T
K
L
Q
A
QN
Q
W
L
Q
D
M
T
T
H
L
I
L
-----
R
S
F
K
E
F
L
Q
S
S
L
R
A
L
R
Q
M
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
37
Fugue
45.61
8%
-39
- C1 -
1FIO
2
SSO1_YEAST
A:
[1-196]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
H
D
F
V
G
F
M
N
K
I
S
Q
I
N
R
D
L
D
K
Y
D
H
T
I
N
Q
-------------
V
-
D
-
S
L
H
K
R
L
L
----
T
E
V
N
--
E
E
Q
A
S
------
H
L
R
H
S
L
D
N
F
V
A
Q
A
T
D
L
Q
F
K
L
K
N
E
I
K
S
A
Q
R
D
G
I
H
D
T
N
K
Q
A
Q
A
E
N
S
R
Q
R
F
L
K
L
-
I
Q
D
Y
R
I
V
D
S
N
Y
K
E
E
N
----
K
E
Q
A
K
R
Q
Y
M
I
I
Q
-----
P
E
A
T
E
D
E
V
E
A
A
I
S
D
V
G
G
Q
Q
I
F
S
Q
A
--
L
L
E
A
K
T
A
L
A
E
V
--
Q
A
R
H
Q
E
L
L
K
L
E
K
S
M
A
E
L
T
Q
L
F
N
D
M
E
E
L
V
I
E
-----
Q
Q
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
11
HHSearch
43.55
14%
-20
- C1 -
4WJ1
-
?
A:
[3-231]
-
E
E
L
Q
Y
E
L
P
G
L
E
R
K
A
H
E
C
E
S
T
R
--------
P
E
G
---
P
G
D
--
A
T
K
P
D
E
L
A
T
T
A
S
V
Y
S
K
L
M
A
S
A
A
K
L
K
A
T
F
A
A
G
D
R
E
G
E
R
I
A
A
A
I
R
A
A
A
G
A
Y
Q
K
I
E
E
Q
K
A
A
E
L
S
R
Q
M
N
G
S
D
A
P
P
P
A
A
E
A
V
V
P
D
M
S
G
I
P
G
P
L
A
I
P
S
---
M
E
Y
P
S
A
A
A
A
A
D
E
M
D
W
E
A
A
A
R
I
I
H
----
S
G
D
TQ
A
L
-
S
M
K
Y
F
R
D
Q
W
R
D
Y
Q
S
T
L
E
G
H
-
G
---
R
H
F
-------------
A
-
N
-
P
A
E
G
W
A
G
----
A
A
A
E
T
C
A
E
A
Q
R
------
R
L
S
T
W
W
A
D
M
G
A
E
C
G
R
L
A
Q
E
A
T
T
F
V
D
A
H
D
K
L
V
A
N
H
P
T
L
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
HHSearch
40.85
14%
-19
- C1 -
4I0X
-
?
A:
[3-77]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------------
D
-
E
V
G
A
L
S
K
F
A
A
S
L
A
D
Q
M
R
A
G
-
S
N
S
L
D
R
D
-------------
V
Q
S
-
L
F
G
V
W
K
G
----
S
A
A
D
A
Y
R
S
G
W
D
------
E
M
Q
D
G
A
T
K
V
W
N
A
L
T
D
I
A
S
T
L
G
S
N
A
A
A
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
20
HHSearch
37.00
14%
-21
- C1 -
4LWS
5
?
A:
[35-124]
--
Q
S
A
V
D
R
A
A
M
A
Q
A
A
Q
D
I
E
Q
S
A
N
A
I
R
G
M
Q
N
Q
L
A
S
A
K
D
Q
L
--
R
S
H
W
E
G
D
A
S
-----
M
A
F
E
A
V
F
N
R
F
N
E
D
F
S
R
V
L
K
A
L
D
G
M
H
E
S
L
V
Q
T
R
I
T
Y
E
A
R
E
E
A
A
Q
Q
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
15
HHSearch
36.19
12%
-21
- C1 -
2VS0
4
ESXA_STAAM
A:
[3-85]
--
M
I
K
M
S
P
E
E
I
R
A
K
S
Q
S
Y
G
Q
G
S
D
Q
I
R
Q
I
L
S
D
L
T
R
A
Q
G
E
I
--
A
A
N
W
E
G
Q
A
F
-----
S
R
F
E
E
Q
F
Q
Q
L
S
P
K
V
E
K
F
A
Q
L
L
E
E
I
K
Q
Q
L
N
S
T
A
D
A
V
Q
E
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
18
HHSearch
36.01
16%
10
- C1 -
4LWS
10
?
B:
[8-91]
S
D
Y
T
R
A
N
F
G
G
L
S
E
G
E
A
Q
F
S
M
T
A
R
A
L
L
D
E
L
T
D
L
E
G
K
L
R
A
K
--
L
D
R
W
D
G
D
A
-----
Q
A
A
Y
W
N
Y
Q
K
E
W
D
A
A
A
K
D
M
Q
N
V
V
A
Q
L
G
V
A
I
R
E
A
H
D
N
Y
Q
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
28
HHSearch
35.40
10%
17
- C1 -
4J42
3
?
A:
[8-87]
-------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
I
T
--
P
E
-
E
L
E
R
I
A
G
N
F
K
N
A
A
G
E
A
Q
S
Q
-
I
N
R
L
E
G
D
-------------
I
-
N
S
L
E
G
Q
W
A
G
----
A
T
Q
A
K
F
R
G
E
F
I
------
Q
S
K
Q
A
M
Q
Q
F
I
P
I
L
E
G
I
S
T
D
L
K
R
I
A
D
K
F
R
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
21
HHSearch
35.26
12%
-18
- C1 -
3ZBH
3
?
A:
[9-95]
-----
L
T
P
E
E
L
R
G
V
A
R
Q
Y
N
V
E
S
S
N
V
T
E
L
I
A
R
L
D
Q
M
S
H
T
L
--
Q
G
I
W
E
G
A
S
-
S
E
A
F
I
Q
Q
----
Y
Q
E
L
R
P
S
F
E
K
M
A
V
L
L
N
E
V
G
Q
Q
L
H
N
S
A
T
I
L
E
D
T
D
Q
Q
I
A
S
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
25
HHSearch
34.23
10%
-10
- C1 -
4I0X
-
?
A:
[3-77]
--------
D
E
V
G
A
L
S
K
F
A
A
S
L
A
D
Q
M
R
A
G
S
N
S
L
D
R
D
V
Q
S
L
--
F
G
V
W
K
G
S
A
-----
A
D
A
Y
R
S
G
W
D
E
M
Q
D
G
A
T
K
V
W
N
A
L
T
D
I
A
S
T
L
G
S
N
A
A
A
F
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23
HHSearch
32.94
12%
-1
- C1 -
4I0X
2
?
B:
[8-90]
--
E
F
S
F
D
L
D
H
I
E
Q
V
T
S
R
A
R
G
F
K
E
F
V
T
E
N
L
D
Q
L
E
S
R
A
Q
K
L
V
Q
S
G
Q
W
A
G
A
A
-----
A
A
A
Y
S
Q
A
H
K
E
W
M
D
A
A
R
E
L
V
E
G
L
S
Q
M
E
E
A
A
R
T
A
H
G
A
Y
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------