@TOME V2.3
(Nov 2016)
Ref.
-
-
Doc.
Global output mode :
Sort entries by :
Atome Result
Tools Result
PDB occurence
Core Structure Cluster
Sequence Color type :
Secondary Structure
Hydrophobicity
Disulfide Bonds
TCoffee Identity Score
Uniprot annotation
Core Structure Cluster
Contacts with Ligands
Show alignment :
Atome selection
All alignments
Only Template with Ligand
Column output:
Score:
Atome Rank Value
Tools Score
Hide column
Alignment:
Sequence Identity (%)
Tcoffee Alignment Score
Hide column
3D Common Core:
Tito PKB Score
Verify3D Score
QMean Score
Hide column
Structural Clustering:
Cluster Num
3D-Jury Struct. Score
Hide column
Modeller Result :
Model Rank
QMean Score
Dfire Score
Dope Score
Errat Score
Verify3D Score
Modeller Score
Hide column
Complexes Modeling
Show Ligands of Templates
Complexes Affinity Score
Main Binding Site Identity
Hide column
Templates Information:
Uniprot entry
Cath class
Scop class
Smart class
Prosite class
Pfam class
EC Number
Taxonomy
Experiment Method
Hide column
Sequence & Result Tab:
PDB Template Sequence
Complexes Tab
Values color: [
Good
|
Correct
|
Middling
|
Bad
]
Sequence color :
Mutated
Helix
Strand
Conserved
Query sequence : PA0016: (2015-12-18 )
MKIIILGAGQVGGTLAEHLASEANDITVVDTDGDRLRDLGDRLDIRTVQGKASFPTVLRQAGADDADMLVAVTNSDETNMVACQVAYTLFNTPTKIARVREPAYLTRTGLFDNEAIPVDVLISPEQVVTNYIKRLIEHPGALQVIDFAEGKAQLVGIKAYYGGPLVGQELRQLREHMPNVDTRVAAIYRRNRPIIPQGDTVIEADDEVFFIAAKAHIRAVMGEMRRLDDSYKRIIIAGGGNVGERLAEAIESRYQVKIIERSPLRCRHLSDTLDSTIVLNGSASDRDLLLEENIGETDVFLALTNDDEANIMSSLLAKRLGASKVMTLINNPAYVDLVQGGEIDIAISPQLATIGTLLAHVRRGDIESVHSLRRGAAEAIEVVAHGDAKSSKVIGRSINEIKLPPGTTIGALVRDEEVLIAHGDTRIESGDHVLLFLVDKKYIRDVERLFQAGLTFF
Atome Classification :
(20 SA)
.......---..10--........20.-----...----....30...--.....40-....----.....50........60........70.--------...--------....80--.........90..---......100....-...110....------...120.......130.......140...---------------...--------------------.150.......160---.......170.....-.-.180.......190-.......200.......210.-----------------------------------.-.....220.------------------------------....----..230.......240------.------......250-----...-------......--260.......270.........280.......290.......300.......310........-320------..-......330.......340-----...------------....350....---------...360.......370.....-..----------------------------.380.......390.......400.--.--.....410.....----------..420.......430.......440.......450.....-----------------------------------------
(Atome)
(Ident)
(Tito)
(Num)
(Ligand)
(Uniprot)
M
K
I
I
I
L
G---AGQV--
G
G
T
L
A
E
H
L
ASE-----AN
D
----
I
T
V
VDTD
G
D
--
R
L
R
D
L
G--DRL
D
----
I
R
T
VQGKAS
F
P
T
V
L
R
QAGADDA
D
M
L
V
A
V
--------TNS--------DET
N
M
---
V
A
C
Q
V
A
Y
T
LFNTP---
T
K
I
A
RVRE
P
A
Y
L
T
-RTGLFDNEAI------
P
V
D
V
L
I
S
P
E
Q
V
V
T
N
Y
I
K
R
L
I
EHPG
A
L
Q
V
I
---------------DFA--------------------EGK
A
Q
L
V
G
I
K
A
YYG---GP
L
V
G
Q
E
L
R
Q
L
R
E
HM-P-N
V
D
T
R
V
A
A
I
Y
RRNR-PIIPQG
D
T
V
I
EADD
E
V
F
F
I
A
A
-----------------------------------
K
-
A
H
I
R
A
V
M
G
E
------------------------------
M
R
R
L
----DDSY
K
R
I
I
I
AGGG
N
V
------
G
------
E
R
L
A
E
A
I
-------ESR-------
Y
Q
V
K
I
I
--ERSPLRC
R
H
L
S--DTLD
S
T
I
V
LNGSASDR
D
L
L
LEENIGET
D
V
F
L
A
LTNDD
E
A
N
I
-
M
S
S
L
L
A
K
R-L
G
-------
A
S
-
K
V
M
T
L
INNP
A
Y
V
D
L
VQGG
E
-----
I
D
I
------------
A
ISP
Q
L
A
T
I
G
T
---------
L
L
A
H
V
RRG
D
I
E
S
V
H
-
S
L
R
RG
A
-
A
E
----------------------------
A
I
E
V
V
AHGDAKS
S
K
V
IGRSI
N
E
I
KL--P--PGT
T
I
G
A
L
V
RD
E
E
----------
V
L
I
AHGDTRIESG
D
H
V
L
L
F
L
VD
K
K
Y
I
R
D
V
E
R
L
F
Q
AGLTFF-----------------------------------------
21
PsiBlast_CBE
93.79
66%
-120
* C3 *
4J9V
5
?
B:
[1-454]
M
K
I
I
I
L
G
---
A
G
Q
V
--
G
G
T
L
A
E
N
L
V
G
E
-----
N
N
D
----
I
T
I
V
D
N
N
A
D
--
R
L
R
E
L
Q
--
D
K
Y
D
----
L
R
V
V
N
G
H
A
S
H
P
D
V
L
H
E
A
G
A
Q
D
A
D
M
L
V
A
V
--------
T
N
T
--------
D
E
T
N
M
---
A
A
C
Q
V
A
F
T
L
F
N
T
P
---
N
R
V
A
R
I
R
S
P
E
Y
L
A
E
K
E
A
L
F
K
S
G
A
I
------
P
V
D
H
L
I
A
P
E
E
L
V
T
S
Y
I
E
R
L
I
Q
Y
P
G
A
L
Q
V
V
---------------
S
F
A
--------------------
E
Q
K
V
S
L
V
A
V
K
A
Y
Y
G
---
G
P
L
V
G
N
A
L
S
A
L
R
E
H
M
-
P
-
H
I
D
T
R
V
A
A
I
F
R
Q
G
R
-
P
I
R
P
Q
G
T
T
I
I
E
A
D
D
E
V
F
F
V
A
A
-----------------------------------
S
-
N
H
I
R
S
V
M
S
E
------------------------------
L
Q
R
L
----
E
K
P
Y
R
R
I
M
I
V
G
G
G
N
I
------
G
------
A
S
L
A
K
R
L
-------
E
Q
T
-------
Y
S
V
K
L
I
--
E
R
D
Y
Q
R
A
E
K
L
S
--
E
Q
L
E
N
T
I
V
F
C
G
D
A
A
D
Q
E
L
L
T
E
E
N
I
D
Q
V
D
V
F
I
A
L
T
N
E
D
E
T
N
I
-
M
S
A
M
L
A
K
R
-
M
G
-------
A
K
-
K
V
M
V
L
I
Q
R
G
A
Y
V
D
L
V
Q
G
G
V
-----
I
D
V
------------
A
I
S
P
Q
Q
A
T
I
S
A
---------
L
L
T
H
V
R
R
A
D
I
V
N
V
S
-
S
L
R
R
G
A
-
A
E
----------------------------
A
I
E
A
V
A
H
G
D
E
T
T
S
K
V
V
G
R
A
I
G
D
I
K
L
--
P
--
P
G
T
T
I
G
A
V
V
R
G
E
E
----------
V
L
I
A
H
D
R
T
V
I
E
Q
D
D
H
V
V
M
F
L
V
D
K
K
Y
V
P
D
V
E
A
L
F
Q
P
S
---------------------------------------------
3
PsiBlast_PDB
92.38
65%
-117
- C3 -
4G65
9
?
A:
[5-460]
-
K
I
I
I
L
G
---
A
G
Q
V
--
G
G
T
L
A
E
N
L
V
G
E
-----
N
N
D
----
I
T
I
V
D
K
D
G
D
--
R
L
R
E
L
Q
--
D
K
Y
D
----
L
R
V
V
N
G
H
A
S
H
P
D
V
L
H
E
A
G
A
Q
D
A
D
M
L
V
A
V
--------
T
N
T
--------
D
E
T
N
M
---
A
A
C
Q
V
A
F
T
L
F
N
T
P
---
N
R
I
A
R
I
R
S
P
Q
Y
L
A
Q
K
E
A
L
F
K
S
G
A
I
------
P
V
D
H
L
I
A
P
E
E
L
V
T
S
Y
I
E
R
L
I
Q
Y
P
G
A
L
Q
V
V
---------------
S
F
A
--------------------
E
E
K
V
S
L
V
A
V
K
A
Y
Y
G
---
G
P
L
V
G
N
A
L
S
A
L
R
E
H
M
-
P
-
H
I
D
T
R
V
A
A
I
F
R
Q
G
R
-
P
I
R
P
Q
G
T
T
I
I
E
A
D
D
E
V
F
F
V
A
A
-----------------------------------
S
-
N
H
I
R
S
V
M
S
E
------------------------------
L
Q
R
L
----
E
K
P
Y
R
R
I
M
I
V
G
G
G
N
I
------
G
------
A
S
L
A
K
R
L
-------
E
Q
T
-------
Y
S
V
K
L
I
--
E
R
N
L
Q
R
A
E
K
L
S
--
E
E
L
E
N
T
I
V
F
C
G
D
A
A
D
Q
E
L
L
T
E
E
N
I
D
Q
V
D
V
F
I
A
L
T
N
E
D
E
T
N
I
-
M
S
A
M
L
A
K
R
-
M
G
-------
A
K
-
K
V
M
V
L
I
Q
R
G
A
Y
V
D
L
V
Q
G
G
V
-----
I
D
V
------------
A
I
S
P
Q
Q
A
T
I
S
A
---------
L
L
T
H
V
R
R
A
D
I
V
N
V
S
-
S
L
R
R
G
A
-
A
E
----------------------------
A
I
E
A
V
A
H
G
D
E
S
N
S
K
V
V
G
R
A
V
G
D
I
K
L
--
P
--
P
G
T
T
I
G
A
I
V
R
G
E
E
----------
V
L
I
A
H
D
R
T
V
I
E
Q
D
D
H
V
V
M
F
L
V
D
K
K
Y
V
P
D
V
E
A
L
F
Q
P
S
P
F
F
------------------------------------------
2
PsiBlast_PDB
92.16
66%
-115
- C3 -
4J9V
3
?
A:
[1-456]
M
K
I
I
I
L
G
---
A
G
Q
V
--
G
G
T
L
A
E
N
L
V
G
E
-----
N
N
D
----
I
T
I
V
D
N
N
A
D
--
R
L
R
E
L
Q
--
D
K
Y
D
----
L
R
V
V
N
G
H
A
S
H
P
D
V
L
H
E
A
G
A
Q
D
A
D
M
L
V
A
V
--------
T
N
T
--------
D
E
T
N
M
---
A
A
C
Q
V
A
F
T
L
F
N
T
P
---
N
R
V
A
R
I
R
S
P
E
Y
L
A
E
K
E
A
L
F
K
S
G
A
I
------
P
V
D
H
L
I
A
P
E
E
L
V
T
S
Y
I
E
R
L
I
Q
Y
P
G
A
L
Q
V
V
---------------
S
F
A
--------------------
E
Q
K
V
S
L
V
A
V
K
A
Y
Y
G
---
G
P
L
V
G
N
A
L
S
A
L
R
E
H
M
-
P
-
H
I
D
T
R
V
A
A
I
F
R
Q
G
R
-
P
I
R
P
Q
G
T
T
I
I
E
A
D
D
E
V
F
F
V
A
A
-----------------------------------
S
-
N
H
I
R
S
V
M
S
E
------------------------------
L
Q
R
L
----
E
K
P
Y
R
R
I
M
I
V
G
G
G
N
I
------
G
------
A
S
L
A
K
R
L
-------
E
Q
T
-------
Y
S
V
K
L
I
--
E
R
D
Y
Q
R
A
E
K
L
S
--
E
Q
L
E
N
T
I
V
F
C
G
D
A
A
D
Q
E
L
L
T
E
E
N
I
D
Q
V
D
V
F
I
A
L
T
N
E
D
E
T
N
I
-
M
S
A
M
L
A
K
R
-
M
G
-------
A
K
-
K
V
M
V
L
I
Q
R
G
A
Y
V
D
L
V
Q
G
G
V
-----
I
D
V
------------
A
I
S
P
Q
Q
A
T
I
S
A
---------
L
L
T
H
V
R
R
A
D
I
V
N
V
S
-
S
L
R
R
G
A
-
A
E
----------------------------
A
I
E
A
V
A
H
G
D
E
T
T
S
K
V
V
G
R
A
I
G
D
I
K
L
--
P
--
P
G
T
T
I
G
A
V
V
R
G
E
E
----------
V
L
I
A
H
D
R
T
V
I
E
Q
D
D
H
V
V
M
F
L
V
D
K
K
Y
V
P
D
V
E
A
L
F
Q
P
S
P
F
-------------------------------------------
24
PsiBlast_CBE
91.31
66%
-117
- C3 -
4J9U
5
?
F:
[1-453]
M
K
I
I
I
L
G
---
A
G
Q
V
--
G
G
T
L
A
E
N
L
V
G
E
-----
N
N
D
----
I
T
I
V
D
N
N
A
D
--
R
L
R
E
L
Q
--
D
K
Y
D
----
L
R
V
V
N
G
H
A
S
H
P
D
V
L
H
E
A
G
A
Q
D
A
D
M
L
V
A
V
--------
T
N
T
--------
D
E
T
N
M
---
A
A
C
Q
V
A
F
T
L
F
N
T
P
---
N
R
V
A
R
I
R
S
P
E
Y
L
A
E
K
E
A
L
F
K
S
G
A
I
------
P
V
D
H
L
I
A
P
E
E
L
V
T
S
Y
I
E
R
L
I
Q
Y
P
G
A
L
Q
V
V
---------------
S
F
A
--------------------
E
Q
K
V
S
L
V
A
V
K
A
Y
Y
G
---
G
P
L
V
G
N
A
L
S
A
L
R
E
H
------
D
T
R
V
A
A
I
F
R
Q
G
R
-
P
I
R
P
Q
G
T
T
I
I
E
A
D
D
E
V
F
F
V
A
A
-----------------------------------
S
-
N
H
I
R
S
V
M
S
E
------------------------------
L
Q
R
L
----
E
K
P
Y
R
R
I
M
I
V
G
G
G
N
I
------
G
------
A
S
L
A
K
R
L
-------
E
Q
T
-------
Y
S
V
K
L
I
--
E
R
D
Y
Q
R
A
E
K
L
S
--
E
Q
L
E
N
T
I
V
F
C
G
D
A
A
D
Q
E
L
L
T
E
E
N
I
D
Q
V
D
V
F
I
A
L
T
N
E
D
E
T
N
I
-
M
S
A
M
L
A
K
R
-
M
G
-------
A
K
-
K
V
M
V
L
I
Q
R
G
A
Y
V
D
L
V
Q
G
G
V
-----
I
D
V
------------
A
I
S
P
Q
Q
A
T
I
S
A
---------
L
L
T
H
V
R
R
A
D
I
V
N
V
S
-
S
L
R
R
G
A
-
A
E
----------------------------
A
I
E
A
V
A
---
E
T
T
S
K
V
V
G
R
A
I
G
D
I
K
L
--
P
--
P
G
T
T
I
G
A
V
V
R
G
E
E
----------
V
L
I
--
D
R
T
V
I
E
Q
D
D
H
V
V
M
F
L
V
D
K
K
Y
V
P
D
V
E
A
L
F
Q
P
----------------------------------------------
22
PsiBlast_CBE
91.03
66%
-114
- C3 -
4J9U
8
?
H:
[1-453]
M
K
I
I
I
L
G
---
A
G
Q
V
--
G
G
T
L
A
E
N
L
V
G
E
-----
N
N
D
----
I
T
I
V
D
N
N
A
D
--
R
L
R
E
L
Q
--
D
K
Y
D
----
L
R
V
V
N
G
H
A
S
H
P
D
V
L
H
E
A
G
A
Q
D
A
D
M
L
V
A
V
--------
T
N
T
--------
D
E
T
N
M
---
A
A
C
Q
V
A
F
T
L
F
N
T
P
---
N
R
V
A
R
I
R
S
P
E
Y
L
A
E
K
E
A
L
F
K
S
G
A
I
------
P
V
D
H
L
I
A
P
E
E
L
V
T
S
Y
I
E
R
L
I
Q
Y
P
G
A
L
Q
V
V
---------------
S
F
A
--------------------
E
Q
K
V
S
L
V
A
V
K
A
Y
Y
G
---
G
P
L
V
G
N
A
L
S
A
L
R
E
H
-----
I
D
T
R
V
A
A
I
F
R
Q
G
R
-
P
I
R
P
Q
G
T
T
I
I
E
A
D
D
E
V
F
F
V
A
A
-----------------------------------
S
-
N
H
I
R
S
V
M
S
E
------------------------------
L
Q
R
L
----
E
K
P
Y
R
R
I
M
I
V
G
G
G
N
I
------
G
------
A
S
L
A
K
R
L
-------
E
Q
T
-------
Y
S
V
K
L
I
--
E
R
D
Y
Q
R
A
E
K
L
S
--
E
Q
L
E
N
T
I
V
F
C
G
D
A
A
D
Q
E
L
L
T
E
E
N
I
D
Q
V
D
V
F
I
A
L
T
N
E
D
E
T
N
I
-
M
S
A
M
L
A
K
R
-
M
G
-------
A
K
-
K
V
M
V
L
I
Q
R
G
A
Y
V
D
L
V
Q
G
G
V
-----
I
D
V
------------
A
I
S
P
Q
Q
A
T
I
S
A
---------
L
L
T
H
V
R
R
A
D
I
V
N
V
S
-
S
L
R
R
G
A
-
A
E
----------------------------
A
I
E
A
V
A
H
G
D
E
T
T
S
K
V
V
G
R
A
I
G
D
I
K
L
--
P
--
P
G
T
T
I
G
A
V
V
R
G
E
E
----------
V
L
I
A
H
D
R
T
V
I
E
Q
D
D
H
V
V
M
F
L
V
D
K
K
Y
V
P
D
V
E
A
L
F
Q
P
----------------------------------------------
23
PsiBlast_CBE
90.94
66%
-113
- C3 -
4J9U
8
?
G:
[1-457]
M
K
I
I
I
L
G
---
A
G
Q
V
--
G
G
T
L
A
E
N
L
V
G
E
-----
N
N
D
----
I
T
I
V
D
N
N
A
D
--
R
L
R
E
L
Q
--
D
K
Y
D
----
L
R
V
V
N
G
H
A
S
H
P
D
V
L
H
E
A
G
A
Q
D
A
D
M
L
V
A
V
--------
T
N
T
--------
D
E
T
N
M
---
A
A
C
Q
V
A
F
T
L
F
N
T
P
---
N
R
V
A
R
I
R
S
P
E
Y
L
A
E
K
E
A
L
F
K
S
G
A
I
------
P
V
D
H
L
I
A
P
E
E
L
V
T
S
Y
I
E
R
L
I
Q
Y
P
G
A
L
Q
V
V
---------------
S
F
A
--------------------
E
Q
K
V
S
L
V
A
V
K
A
Y
-----
G
P
L
V
G
N
A
L
S
A
L
R
E
H
-----
I
D
T
R
V
A
A
I
F
R
Q
G
R
-
P
I
R
P
Q
G
T
T
I
I
E
A
D
D
E
V
F
F
V
A
A
-----------------------------------
S
-
N
H
I
R
S
V
M
S
E
------------------------------
L
Q
R
L
----
E
K
P
Y
R
R
I
M
I
V
G
G
G
N
I
------
G
------
A
S
L
A
K
R
L
-------
E
Q
T
-------
Y
S
V
K
L
I
--
E
R
D
Y
Q
R
A
E
K
L
S
--
E
Q
L
E
N
T
I
V
F
C
G
D
A
A
D
Q
E
L
L
T
E
E
N
I
D
Q
V
D
V
F
I
A
L
T
N
E
D
E
T
N
I
-
M
S
A
M
L
A
K
R
-
M
G
-------
A
K
-
K
V
M
V
L
I
Q
R
G
A
Y
V
D
L
V
Q
G
G
V
-----
I
D
V
------------
A
I
S
P
Q
Q
A
T
I
S
A
---------
L
L
T
H
V
R
R
A
D
I
V
N
V
S
-
S
L
R
R
G
A
-
A
E
----------------------------
A
I
E
A
V
A
H
G
D
E
T
T
S
K
V
V
G
R
A
I
G
D
I
K
L
--
P
--
P
G
T
T
I
G
A
V
V
R
G
E
E
----------
V
L
I
A
H
D
R
T
V
I
E
Q
D
D
H
V
V
M
F
L
V
D
K
K
Y
V
P
D
V
E
A
L
F
Q
P
S
P
F
F
------------------------------------------
1
PsiBlast_PDB
90.50
66%
-114
- C3 -
4J9U
11
?
E:
[1-457]
M
K
I
I
I
L
G
---
A
G
Q
V
--
G
G
T
L
A
E
N
L
V
G
E
-----
N
N
D
----
I
T
I
V
D
N
N
A
D
--
R
L
R
E
L
Q
--
D
K
Y
D
----
L
R
V
V
N
G
H
A
S
H
P
D
V
L
H
E
A
G
A
Q
D
A
D
M
L
V
A
V
--------
T
N
T
--------
D
E
T
N
M
---
A
A
C
Q
V
A
F
T
L
F
N
T
P
---
N
R
V
A
R
I
R
S
P
E
Y
L
A
E
K
E
A
L
F
K
S
G
A
I
------
P
V
D
H
L
I
A
P
E
E
L
V
T
S
Y
I
E
R
L
I
Q
Y
P
G
A
L
Q
V
V
---------------
S
F
A
--------------------
E
Q
K
V
S
L
V
A
V
K
A
Y
-----
G
P
L
V
G
N
A
L
S
A
L
R
E
H
------
D
T
R
V
A
A
I
F
R
Q
G
R
-
P
I
R
P
Q
G
T
T
I
I
E
A
D
D
E
V
F
F
V
A
A
-----------------------------------
S
-
N
H
I
R
S
V
M
S
E
------------------------------
L
Q
R
L
----
E
K
P
Y
R
R
I
M
I
V
G
G
G
N
I
------
G
------
A
S
L
A
K
R
L
-------
E
Q
T
-------
Y
S
V
K
L
I
--
E
R
D
Y
Q
R
A
E
K
L
S
--
E
Q
L
E
N
T
I
V
F
C
G
D
A
A
D
Q
E
L
L
T
E
E
N
I
D
Q
V
D
V
F
I
A
L
T
N
E
D
E
T
N
I
-
M
S
A
M
L
A
K
R
-
M
G
-------
A
K
-
K
V
M
V
L
I
Q
R
G
A
Y
V
D
L
V
Q
G
G
V
-----
I
D
V
------------
A
I
S
P
Q
Q
A
T
I
S
A
---------
L
L
T
H
V
R
R
A
D
I
V
N
V
S
-
S
L
R
R
G
A
-
A
E
----------------------------
A
I
E
A
V
A
H
G
D
E
T
T
S
K
V
V
G
R
A
I
G
D
I
K
L
--
P
--
P
G
T
T
I
G
A
V
V
R
G
E
E
----------
V
L
I
A
H
D
R
T
V
I
E
Q
D
D
H
V
V
M
F
L
V
D
K
K
Y
V
P
D
V
E
A
L
F
Q
P
S
P
F
F
------------------------------------------
79
HHSearch
51.52
26%
-100
- C3 -
3L4B
-
?
C:
[1-216]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
K
V
I
I
I
G
G
E
T
T
------
A
------
Y
Y
L
A
R
S
M
-------
L
S
R
K------
Y
G
V
V
I
I
--
N
K
D
R
E
L
C
E
E
F
A
--
K
K
L
-
K
A
T
I
I
H
G
D
G
S
H
K
E
I
L
R
D
A
E
V
S
K
N
D
V
V
V
I
L
T
P
R
D
E
V
N
L
-
F
I
A
Q
L
V
M
K
D
F
G
-------
V
K
-
R
V
V
S
L
V
N
D
P
G
N
M
E
I
F
K
K
M
G
-----
I
T
T
------------
V
L
N
L
T
T
L
I
T
N
T
---------
V
E
A
L
I
F
P
D
E
F
S
S
I
I
-
P
L
E
Q
-
G
-
I
E
----------------------------
F
L
S
V
N
V
---
E
E
D
S
P
V
V
G
K
K
L
K
D
L
P
L
--
P
--
R
D
S
I
I
A
A
I
V
R
G
G
V
----------
L
V
V
P
R
G
D
T
E
I
L
S
G
D
K
L
Y
V
I
V
-
S
A
E
A
K
E
T
V
E
E
T
L
L
-----------------------------------------------
74
HHSearch
51.39
15%
-91
- C3 -
3MT5
2
KCMA1_HUMAN
A:
[4-717]
K
H
I
V
V
C
G
---
H
I
T
L
E
S
V
S
N
F
L
K
D
F
L
H
K
DRDDV
N
V
E
----
I
V
F
L
H
N
I
S
P
NL
E
L
E
A
L
F
K
R
H
F
T
Q
----
V
E
F
Y
Q
G
S
V
L
N
P
H
D
L
A
R
V
K
I
E
S
A
D
A
C
L
I
L
--------
A
N
K
YCAD
P
D
A
E
D
A
S
N
I
---
M
R
V
I
S
I
K
N
Y
H
P
K
I
---
R
I
I
T
Q
M
L
Q
Y
H
N
K
A
-
H
L
-----
L
N
I
PSWNWK
E
G
D
D
A
I
C
L
A
E
L
K
L
G
F
I
A
Q
S
C
L
A
Q
G
L
S
T
M
L
---------------
A
N
L
F
S
M
R
S
F
IKIEEDT
W
Q
K
Y
Y
L
E
G
V
S
N
E
M
Y
T
E
Y
L
S
-----
S
A
F
V
G
L
S
F
P
T
V
C
E
L
C
F
V
-
K
L
K
L
L
M
I
A
I
E
Y
-
S
R
I
L
I
N
P
G
N
H
L
K
I
Q
E
G
T
L
G
F
F
I
A
S
-----------------------------------
D
A
K
E
V
K
R
A
F
F
Y
CKD
N
M
D
S
N
VKKYDSTGM
F
H
W
C
A
PKEIEKVI
L
T
R
S
E
A
A
M
T
V
L
S
G
H
V
V
V
C
I
F
G
D
V
SSALIG
L
------
R
N
L
V
M
P
L
-------
R
A
S
NFHYHE
L
K
H
I
V
F
V
--
G
S
I
E
Y
L
K
R
E
W
E
TL
H
N
F
P
K
V
S
I
L
P
G
T
P
L
S
R
A
D
L
R
A
V
N
I
N
L
C
D
M
C
V
I
L
S
A
N
D
K
E
C
I
-
L
A
S
L
N
I
K
S
-
M
Q
FDSITTG
V
N
I
P
I
I
T
E
L
V
N
D
T
N
V
Q
F
L
D
Q
D
D
D
D
D
PD
T
E
L
------------
Y
L
T
Q
P
F
A
C
G
T
A
FAVSVL
D
S
L
M
S
A
T
Y
F
N
D
N
I
L
T
L
I
R
T
L
V
T
G
G
A--L
E
A
L
I
A
E
EN
A
L
R
G
G
Y
ST
P
Q
T
L
A
N
R
D
R
C
R
V
A
Q
L
A
L
L
D
G
P
F
A
D
L
G
D
G
G
C
Y
G
D
L
F
C
K
A
L
K
T
Y
N
M
L
C
F
G
I
Y
R
L
R
D
APSQCT
K
R
Y
V
I
T
N
P
P
Y
E
F
E
L
V
P
T
D
L
I
F
C
L
M
-
Q
-
F
D
--------------------------------------------------------
4
PsiBlast_PDB
50.25
38%
-88
- C3 -
1LSS
3
TRKA_METJA
A:
[5-136]
M
Y
I
I
I
A
G
---
I
G
R
V
--
G
Y
T
L
A
K
S
L
S
E
K
-----
G
H
D
----
I
V
L
I
D
I
D
K
D
--
I
C
K
K
A
S
--
A
E
I
D
----
A
L
V
I
N
G
D
C
T
K
I
K
T
L
E
D
A
G
I
E
D
A
D
M
Y
I
A
V
--------
T
G
K
--------
E
E
V
N
L
---
M
S
S
L
L
A
K
S
-
Y
G
I
N
---
K
T
I
A
R
I
S
E
I
E
Y
----
K
D
V
F
--
E
R
L
------
G
V
D
V
V
V
S
P
E
L
I
A
A
N
Y
I
E
K
L
I
E
R
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
27
PsiBlast_CBE
49.78
38%
-89
- C3 -
1LSS
2
TRKA_METJA
B:
[5-136]
M
Y
I
I
I
A
G
---
I
G
R
V
--
G
Y
T
L
A
K
S
L
S
E
K
-----
G
H
D
----
I
V
L
I
D
I
D
K
D
--
I
C
K
K
A
S
--
A
E
I
D
----
A
L
V
I
N
G
D
C
T
K
I
K
T
L
E
D
A
G
I
E
D
A
D
M
Y
I
A
V
--------
T
G
K
--------
E
E
V
N
L
---
M
S
S
L
L
A
K
S
-
Y
G
I
N
---
K
T
I
A
R
I
S
E
I
E
Y
----
K
D
V
F
--
E
R
L
------
G
V
D
V
V
V
S
P
E
L
I
A
A
N
Y
I
E
K
L
I
E
R
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
26
PsiBlast_CBE
49.43
38%
-91
- C3 -
1LSS
2
TRKA_METJA
C:
[5-136]
M
Y
I
I
I
A
G
---
I
G
R
V
--
G
Y
T
L
A
K
S
L
S
E
K
-----
G
H
D
----
I
V
L
I
D
I
D
K
D
--
I
C
K
K
A
S
--
A
E
I
D
----
A
L
V
I
N
G
D
C
T
K
I
K
T
L
E
D
A
G
I
E
D
A
D
M
Y
I
A
V
--------
T
G
K
--------
E
E
V
N
L
---
M
S
S
L
L
A
K
S
-
Y
G
I
N
---
K
T
I
A
R
I
S
E
I
E
Y
----
K
D
V
F
--
E
R
L
------
G
V
D
V
V
V
S
P
E
L
I
A
A
N
Y
I
E
K
L
I
E
R
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
5
PsiBlast_PDB
48.86
27%
-105
- C3 -
3L4B
-
?
C:
[2-203]
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
K
V
I
I
I
G
G
E
T
T
------
A
------
Y
Y
L
A
R
S
M
-------
L
S
R
K------
Y
G
V
V
I
I
--
N
K
D
R
E
L
C
E
E
F
A
--
K
K
L
K
A
T
I
I
-
H
G
D
G
S
H
K
E
I
L
R
D
A
E
V
S
K
N
D
V
V
V
I
L
T
P
R
D
E
V
N
L
F
I
A
Q
L
V
M
K
D
-
F
G
-------
V
K
-
R
V
V
S
L
V
N
D
P
G
N
M
E
I
F
K
K
M
G
-----
I
T
T
------------
V
L
N
L
T
T
L
I
T
N
T
---------
V
E
A
L
I
F
P
D
E
F
S
S
I
I
-
P
L
E
Q
G
---------------------------------
I
E
F
L
S
V
N
V
E
E
D
S
P
V
V
G
K
K
L
K
D
L
P
L
--
P
--
R
D
S
I
I
A
A
I
V
R
G
G
V
----------
L
V
V
P
R
G
D
T
E
I
L
S
G
D
K
L
Y
V
I
V
S
A
E
A
K
E
T
V
E
E
T
L
L
------------------------------------------------
87
HHSearch
48.51
39%
-76
- C3 -
1LSS
3
TRKA_METJA
A:
[5-136]
M
Y
I
I
I
A
G
---
I
G
R
V
--
G
Y
T
L
A
K
S
L
S
E
K
-----
G
H
D
----
I
V
L
I
D
I
D
K
D
--
I
C
K
K
A
S
--
A
E
I
D
----
A
L
V
I
N
G
D
C
T
K
I
K
T
L
E
D
A
G
I
E
D
A
D
M
Y
I
A
V
--------
T
G
K
--------
E
E
V
N
L
---
M
S
S
L
L
A
K
S
Y
-
G
I
N
---
K
T
I
A
R
I
S
E
I
E
Y
K
D
-
V
F
-----
E
R
L
------
G
V
D
V
V
V
S
P
E
L
I
A
A
N
Y
I
E
K
L
I
E
R
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
6
PsiBlast_PDB
48.46
29%
-85
- C3 -
2G1U
4
?
A:
[22-149]
--
I
V
I
F
G
---
C
G
R
L
--
G
S
L
I
A
N
L
A
S
S
S
-----
G
H
S
----
V
V
V
V
D
K
N
E
Y
--
A
F
H
R
L
N
--
S
E
F
S
----
G
F
T
V
V
G
D
A
A
E
F
E
T
L
K
E
C
G
M
E
K
A
D
M
V
F
A
F
--------
T
N
D
--------
D
S
T
N
F
---
F
I
S
M
N
A
R
Y
M
F
N
V
E
---
N
V
I
A
R
V
Y
D
P
---
E
-
K
I
K
I
F
E
E
N
G
I
------
K
T
---
I
C
P
A
V
L
M
I
E
K
V
K
E
F
I
I
G
S
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
105
Fugue
48.32
15%
-70
- C2 -
3MT5
2
KCMA1_HUMAN
A:
[4-717]
K
H
I
V
V
C
G
HIT
L
E
S
V
--
S
N
F
L
K
D
F
L
H
K
D
-----
R
D
D
VNVE
I
V
F
L
H
N
I
S
P
--
N
L
E
L
E
A
--
L
F
K
R
H
F
TQ
V
E
F
Y
Q
G
S
V
L
N
P
H
D
L
A
R
V
K
I
E
S
A
D
A
C
L
I
L
A
NKYCAD
P
D
A
E
--------
D
A
S
N
I
---
M
R
V
I
S
I
K
N
Y
H
P
K
I
R
I
I
T
Q
M
L
Q
Y
H
N
K
A
H
L
L
-
N
I
P
S
W
N
W
K
--------
E
G
D
D
A
I
C
L
A
E
L
K
L
G
F
I
A
Q
S
C
L
A
Q
G
L
S
T
M
L
A
N
L
F
S
M
R
S
F
IKIEED
T
W
Q
--------------------
K
Y
Y
L
E
G
V
S
N
E
M
Y
T
E
Y
L
S
S
A
F
V
G
L
S
F
P
T
V
C
E
L
C
-
F
V
K
L
K
L
L
M
I
A
I
E
Y
S
R
I
-
L
I
N
P
G
N
H
L
K
I
Q
E
G
T
L
G
F
F
I
A
S
D
A
K
E
V
K
RAFFYCKD
N
M
D
S
N
VKKYDSTGM
F
H
W
C
A
PK
E
-
I
E
K
V
I
L
T
R
S
------------------------------
E
A
A
M
----
T
V
L
S
G
H
V
V
V
C
I
F
G
D
V
------
S
SALIGL
R
N
L
V
M
P
L
R
ASNFHY
H
E
L
-------
K
H
I
V
F
V
G
S
I
E
Y
L
K
R
E
W
E
T
L
--
H
N
F
P
K
V
S
I
L
P
G
T
P
L
S
R
A
D
L
R
A
V
N
I
N
L
C
D
M
C
V
I
L
S
A
N
D
K
E
C
I
-
L
A
S
L
N
I
K
S
-
M
Q
-------
F
D
-
S
I
T
T
G
V
N
I
P
I
I
T
E
L
V
N
D
T
N
-----
V
Q
F
LDQD
D
D
D
D
PDTE
L
Y
L
T
Q
P
F
A
C
G
T
---------
A
F
A
V
S
V
L
D
S
L
M
S
A
T
-
Y
F
N
D
N
I
-
L
T
----------------------------
L
I
R
T
L
V
T
G
G
A
L
E
A
L
I
A
E
E
N
--------
A
--
L
R
G
G
Y
S
T
P
Q
T
L
A
N
----------
R
D
R
C
R
V
A
Q
L
A
L
L
D
G
P
F
A
D
L
G
D
G
G
C
Y
G
D
L
F
C
K
A
L
K
T
Y
N
M
L
C
F
GIYRLRDAPSQCT
K
R
Y
V
I
T
NPPYEFELVPT
D
L
I
F
C
L
M
Q
F
D
25
PsiBlast_CBE
48.04
38%
-89
- C3 -
1LSS
2
TRKA_METJA
D:
[5-136]
M
Y
I
I
I
A
G
---
I
G
R
V
--
G
Y
T
L
A
K
S
L
S
E
K
-----
G
H
D
----
I
V
L
I
D
I
D
K
D
--
I
C
K
K
A
S
--
A
E
I
D
----
A
L
V
I
N
G
D
C
T
K
I
K
T
L
E
D
A
G
I
E
D
A
D
M
Y
I
A
V
--------
T
G
K
--------
E
E
V
N
L
---
M
S
S
L
L
A
K
S
-
Y
G
I
N
---
K
T
I
A
R
I
S
E
I
E
Y
----
K
D
V
F
--
E
R
L
------
G
V
D
V
V
V
S
P
E
L
I
A
A
N
Y
I
E
K
L
I
E
R
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
92
HHSearch
47.95
29%
-81
- C3 -
2G1U
4
?
A:
[20-152]
K
Y
I
V
I
F
G
---
C
G
R
L
--
G
S
L
I
A
N
L
A
S
S
S
-----
G
H
S
----
V
V
V
V
D
K
N
E
Y
--
A
F
H
R
L
N
--
S
E
F
S
----
G
F
T
V
V
G
D
A
A
E
F
E
T
L
K
E
C
G
M
E
K
A
D
M
V
F
A
F
--------
T
N
D
--------
D
S
T
N
F
---
F
I
S
M
N
A
R
Y
M
F
N
V
E
---
N
V
I
A
R
V
Y
D
P
E
K
I
K
-
I
F
-----
E
E
N
------
G
I
K
-
T
I
C
P
A
V
L
M
I
E
K
V
K
E
F
I
I
G
S
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
10
PsiBlast_PDB
47.30
30%
-91
- C3 -
4GX5
1
?
A:
[351-430]
--
I
F
I
I
G
---
H
G
R
I
--
G
C
A
A
A
A
F
L
D
R
K
-----
P
V
P
----
F
I
L
I
D
R
Q
E
S
--
P
V
C
N
-------
D
----
H
V
V
V
Y
G
D
A
T
V
G
Q
T
L
R
Q
A
G
I
D
R
A
S
G
I
I
V
T
--------
T
N
D
--------
D
S
T
N
I
F
L
T
L
A
C
R
H
L
H
S
H
I
R
I
V
---
A
R
A
N
G
E
E
N
V
D
Q
L
Y
-
A
A
G
A
D
F
V
V
S
N
------
A
S
V
G
A
N
I
L
G
N
L
L
E
H
K
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
89
HHSearch
47.20
30%
-78
- C3 -
1LSS
3
TRKA_METJA
A:
[5-136]
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
M
Y
I
I
I
A
G
I
G
R
V
------
G
------
Y
T
L
A
K
S
L
-------
S
E
K
G------
H
D
I
V
L
I
--
D
I
D
K
D
I
C
K
K
A
S
--
A
E
I
-
D
A
L
V
I
N
G
D
C
T
K
I
K
T
L
E
D
A
G
I
E
D
A
D
M
Y
I
A
V
T
G
K
E
E
V
N
L
-
M
S
S
L
L
A
K
S
-
Y
G
-------
I
N
-
K
T
I
A
R
I
S
E
I
E
Y
K
D
V
F
E
R
L
G
-----
V
D
V
------------
V
V
S
P
E
L
I
A
A
N
Y
---------
I
E
K
L
I
E
R
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------