@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA0017: (2015-12-18 )
MNPRLAACQALAAVLAGRASLSGALPPQLDKVAPRDRGLTQELAFGAARWQPRLQALAARLLQKPFKAADTDIHALLLIGLYQLLYTRIPPHAAIGETVGCADKLKKGWAKGVLNAVLRRAQREGETLLAEVDRDPSARLGHPRWLLKALKQAWPEQLDALCAANNAHPPMTLRVNRRHGERDAYLAELAEAGIKARACDYSRDGIQLAAPRDVRELPGFAEGRVSVQDEAAQLAAEQLESAPGQRVLDACCAPGGKTCHLLETQPELAEVVAVDLEESRLVRVRENLQRLGLQASLVAADARATGEWWDGKPFQRILLDAPCSATGVIRRHPDIKLARKPEDIAALAHLQGELLDALWPTLEVGGVLLYATCSVMPAENSDSIAAFLARTPGARELDLPGPWGMKQPHGRQLLPQVEGHDGFYYAKLIKISAR

Atome Classification :

(20 SA) ---------.........10........----20.......--.---30-...-......40........50........60..-......70........80......-..90...-.....100......----.110.......120.......---130.......140.......150..-.....160....-...170.......180.......190......------------------.200.......210........220.......230.......240.......250.......260.......270.......280.......-------290-..-.-.-------...300......-.--310--.......320..--..--...330.......340..--.....350.-.....-.360.......370.......380.......390.-......400--------------.-------.......410-........420........430..
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ---------MNPRLAACQALAAVLAGRA----SLSGALPPQ--L---D--KVA-PRDRGLTQELAFGAARWQPRLQALAARLLQ-KPFKAADTDIHALLLIGLYQLLYT-RIPPHAA-IGETVGCADKLKKG----WAKGVLNAVLRRAQREGETLL---AEVDRDPSARLGHPRWLLKALKQAW-PEQLDALCAANN-AHPPMTLRVNRRHGERDAYLAELAEAGIKARA------------------CDYSRDGIQLAAP-RDVRELPGFAEGRVSVQDEAAQLAAEQLESAPGQRVLDACCAPGGKTCHLLETQPELAEVVAVDLEESRLVRVRENLQ-------RLG-LQ-A-S-------LVAADARATGEW-W--DGK--PFQRILLDAPCS--AT--GVIRRHPDIKLARKPEDI--AALAHLQGE-LLDAL-WPTLEVGGVLLYATCSVMPAENSDSIAAFLARTPG-ARELDLP-G--------------P-------WGMKQPHG-R-QLLPQVEGH-DGFYYAKLIKISAR
2 PsiBlast_PDB 95.7550% -82 - C1 -1SQG - RSMB_ECOLI A:[6-428] ----------NLRSMAAQAVEQVVEQGQ----SLSNILPPL--Q---Q--KVS-DKDKALLQELCFGVLRTLSQLDWLINKLMA-RPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAA-LAETVEGAIAIKRP----QLKGLINGVLRQFQRQQEELL---AEFNAS-DARYLHPSWLLKRLQKAY-PEQWQSIVEANN-QRPPMWLRINRTHHSRDSWLALLDEAGMKGFP------------------HADYPDAVRLETP-APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLK-------RLG-MK-A-T-------VKQGDGRYPSQW-C--GEQ--QFDRILLDAPCS--AT--GVIRRHPDIKWLRRDRDI--PELAQLQSE-ILDAI-WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD-AELCETG-T--------------P----------EQP-G-K-QNLPGAEEG-DGFFYAKLIK----
49 Fugue 95.7050% -84 - C1 -1SQG - RSMB_ECOLI A:[5-428] ---------RNLRSMAAQAVEQVVEQGQ----SLSNILPPL--Q---Q--KVS-DKDKALLQELCFGVLRTLSQLDWLINKLMA-RPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAA-LAETVEGAIAIKRP----QLKGLINGVLRQFQRQQEELL---AEF-NASDARYLHPSWLLKRLQKAY-PEQWQSIVEANN-QRPPMWLRINRTHHSRDSWLALLDEAGMKGFP------------------HADYPDAVRLETP-APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLK-------RLG-MK-A-T-------VKQGDGRYPSQW-C--GEQ--QFDRILLDAPCS--AT--GVIRRHPDIKWLRRDRDI--PELAQLQSE-ILDAI-WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD-AELCET--------------------------GTPEQPG-K-QNLPGAEEG-DGFFYAKLIK----
26 HHSearch 95.2250% -83 - C1 -1SQG - RSMB_ECOLI A:[6-428] ----------NLRSMAAQAVEQVVEQGQ----SLSNILPPL--Q---Q--KVS-DKDKALLQELCFGVLRTLSQLDWLINKLMA-RPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAA-LAETVEGAIAIKRP----QLKGLINGVLRQFQRQQEELL----AEFNASDARYLHPSWLLKRLQKAY-PEQWQSIVEANN-QRPPMWLRINRTHHSRDSWLALLDEAGMKGFP------------------HADYPDAVRLETP-APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLK-------RLG-MK-A-T-------VKQGDGRYPSQW-C--GEQ--QFDRILLDAPCS--AT--GVIRRHPDIKWLRRDRDI--PELAQLQSE-ILDAI-WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD-AELCETG--------------------------TPEQPG-K-QNLPGAEEG-DGFFYAKLIK----
1 PsiBlast_PDB 94.3250% -79 - C1 -1SQF RSMB_ECOLI A:[6-428] ----------NLRSMAAQAVEQVVEQGQ----SLSNILPPL--Q---Q--KVS-DKDKALLQELCFGVLRTLSQLDWLINKLMA-RPMTGKQRTVHYLIMVGLYQLLYT-RIPPHAA-LAETVEGAIAIKRP----QLKGLINGVLRQFQRQQEELL---AEFNAS-DARYLHPSWLLKRLQKAY-PEQWQSIVEANN-QRPPMWLRINRTHHSRDSWLALLDEAGMKGFP------------------HADYPDAVRLETP-APVHALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLK-------RLG-MK-A-T-------VKQGDGRYPSQW-C--GEQ--QFDRILLDAPCS--AT--GVIRRHPDIKWLRRDRDI--PELAQLQSE-ILDAI-WPHLKTGGTLVYATCSVLPEENSLQIKAFLQRTAD-AELCETG-T--------------P----------EQP-G-K-QNLPGAEEG-DGFFYAKLIKK---
27 HHSearch 65.4222% -69 - C1 -2YXL ? A:[10-448] -----------IPPKGIRAIIEAIRLGEIIKPSQYAKREAF--KK--H--DVEEAWLNRVLTMIFYDIMKKQGLIDKVIKEIVG-VTPLILDPWLRAALRVAVDIALFH-D-PSSQTIKNLRWKASD-FISSRTHPYVGMYFWDLLDKIFEYKPN-P---KNELEELEWKYLAPSWLIERVKGIL-GDETEDFFRSVNKRHEWISIRVNTLKANVEEVIGELEEDGVEVVR------------------SERVPTILKIKGP-YNFDTSSAFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVK-------RMG-IK-IVK-------PLVKDARKAPEI-I--GEE--VADKVLLDAPCT--SS--GTIGKNPELRWRLREDKI--NEMSQLQRE-LLESA-ARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPE-FKLVPLK-S--------------PY------DPGFLEGT-M-RAWPHRHST-IGFFYALLEK----
50 Fugue 64.2822% -66 - C1 -2YXL ? A:[6-448] KKLSIPPKGIRAIIEAIRLGEIIKPSQY----AKREAFKKH------D--VEE-AWLNRVLTMIFYDIMKKQGLIDKVIKEIVG-VTPLILDPWLRAALRVAVDIALF--HDPSSQT-IKNLRWKASDFISS----RTHPYVGMYFWDLLDKIFEYKPNPKNELEELEWKYLAPSWLIERVKGILGDETEDFFRSVNK-RHEWISIRVNTLKANVEEVIGELEEDGVEVVR------------------SERVPTILKIKGP-YNFDTSSAFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVK-------RMG-IKIV-K-------PLVKDARKAPEI-I--GEE--VADKVLLDAPCT--SS--GTIGKNPELRWRLREDKI--NEMSQLQRE-LLESA-ARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPE-FKLVPLK-S--------------P-------YDPGFLEGTM-RAWPHRHST-IGFFYALLEK----
3 PsiBlast_PDB 58.2429% -68 - C1 -2YXL ? A:[158-448] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------PSWLIERVKGILGDETEDFFRSVNK-RHEWISIRVNTLKANVEEVIGELEEDGVEVVR------------------SERVPTILKIKGP-YNFDTSSAFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVK-------RMG-IKIV-K-------PLVKDARKAPEI-I--GEE--VADKVLLDAPCT--SS--GTIGKNPELRWRLREDKI--NEMSQLQRE-LLESA-ARLVKPGGRLLYTTCSIFKEENEKNIRWFLNVHPE-FKLVPLK-S--------------P-------YDPGFLEG-TMRAWPHRHST-IGFFYALLEK----
33 HHSearch 55.4825% -70 - C1 -3AJD TRM4_METJA A:[9-274] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KMQFIRVNTLKINPEVLKKRLENKGVVLEK------------------T-FLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNIN-------RMG-VL-NTI-------IINADMRKYKDY-LLKNEI--FFDKILLDAPCS--------------------EEDI--KYCSLRQKE-LIDIG-IDLLKKDGELVYSTCSMEVEENEEVIKYILQKRND-VELIIIK-A--------------NEFKGINIKEGYIKGT-L-RVFPP---N-EPFFIAKLRKI---
32 HHSearch 52.0827% -58 - C1 -2B9E NSUN5_HUMAN A:[9-301] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------QLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQ-TDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLA-------RAG-VS-CCE-------LAEEDFLAVSPSDP--RYH--EVHYILLDPSCS--G------------------VRL--HALAGFQQR-ALCHA-LTF-PSLQRLVYSTCSLCQEENEDVVRDALQQNPGAFRLAPALPA--------------WPHRGLS-TFPGAEHC-L-RASPETTLS-SGFFVAVIERV---
53 Fugue 49.3421% -51 - C1 -4FP9 NSUN4_HUMAN A:[15-360] -----------------------------------------------------------------------------PAVRLAL-QNFDMTYSVQFGDLWPSIRVSLLS-EQKYGAL-VNNFAA-----------------WDHVSAKLEQLSAKDF---VNEAISHWELQPSP--------------------ASWA-CSPNLRCFTFDRGDISRFPPARPGSLGVM-----------------------------------------------EYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTG-CCRNLAANDLSPSRIARLQKILH-------SYV-PE-E-IRDGNQVRVTSWDGRKWGEL----EGD--TYDRVLVDVPCTTDRH--SLHEEENNIFKRSRKKER--QILPVLQVQ-LLAAG-LLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN-QYSIQVQ-VEDLTHFRRVFMDTFC-------FFSSCQVG-E-LVIPNLMANFGPMYFCKMRRLT--
21 PsiBlast_CBE 48.0535% -65 - C1 -3M6V RSMF_THET8 B:[76-255] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PFFYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVE-------RWG-AP-L-A-------VTQAPPRALAEA-F---GT--YFHRVLLDAPCS--GE--GMFRKDREAARHWGPSAP--KRMAEVQKA-LLAQA-SRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHPE-FRLEDAR-L--------------H-------PLFAPGVP-E-WGEGNPELL-KTARLWPHRLEGEG
7 PsiBlast_PDB 47.5235% -65 - C1 -3M6V RSMF_THET8 A:[76-255] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PFFYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVE-------RWG-AP-L-A-------VTQAPPRALAEA-F---GT--YFHRVLLDAPCS--GE--GMFRKDREAARHWGPSAP--KRMAEVQKA-LLAQA-SRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHPE-FRLEDAR-L--------------H-------PLFAPGVP-E-WGEGNPELL-KTARLWPHRLEGEG
12 PsiBlast_PDB 47.2834% -70 - C1 -2B9E NSUN5_HUMAN A:[72-259] ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLA-------RAG-VS-C-C-------ELAEEDFLAVSP-S--DPRYHEVHYILLDPSCS--G--------------------VRLHALAGFQQRALCHALTFPSLQ---RLVYSTCSLCQEENEDVVRDALQQNPG-AFRLAPA-L--------------P-------AWPHRGLS-T-FPGAEHCLR-ASPETTLSSGFFVA
6 PsiBlast_PDB 46.9035% -68 - C1 -3M6U RSMF_THET8 A:[76-255] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PFFYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVE-------RWG-AP-L-A-------VTQAPPRALAEA-F---GT--YFHRVLLDA-------------------RHWGP--P--KRMAEVQKA-LLAQA-SRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHPE-FRLEDAR-L--------------H-------PLFAPGVP-E-WGEGNPELL-KTARLWPHRLEGEG
10 PsiBlast_PDB 46.8529% -70 - C1 -3AJD TRM4_METJA A:[50-229] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------SP-FSIGSTPEYLFGYYMPQSISSMIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNIN-------RMGVLN-T-I-------IINADMRKYKDY-LLKNEI--FFDKILLDAPCS--------------------EEDI--KYCSLRQKE-LIDIG-IDLLKKDGELVYSTCSMEVEENEEVIKYILQKRND-VELIIIK-A--------------N-------EFKGINIK-E-GYIKGTLRV-FPPNEPFFIAKLRK
22 PsiBlast_CBE 46.4535% -66 - C1 -3M6U RSMF_THET8 B:[76-255] -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------PFFYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVE-------RWG-AP-L-A-------VTQAPPRALAEA-F---GT--YFHRVLLDA-------------------RHWGP-------MAEVQKA-LLAQA-SRLLGPGGVLVYSTCTFAPEENEGVVAHFLKAHPE-FRLEDAR-L--------------H-------PLFAPGVP-E-WGEGNPELL-KTARLWPHRLEGEG
34 HHSearch 45.4624% -76 - C1 -3D3B NUSB_ECOLI A:[10-137] ----------RARECAVQALYSWQLSQN----DIADVEYQF--L---AEQDVK-DVDVLYFRELLAGVATNTAYLDGLMKPYLS-RLLEELGQVEKAVLRIALYELSKRSDVPYKVA-INEAIELAKSFGAE----DSHKFVNGVLDKAAPVIRPNK---K---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36 HHSearch 43.8020% -84 - C1 -1EYV NUSB_MYCTU A:[12-139] ----------QARKRAVALLFEAEVRGI----SAAEVVDTRAALAEAK--PDI-ARLHPYTAAVARGVSEHAAHIDDLITAHLRGWTLDRLPAVDRAILRVSVWELLHAADVPEPVV-VDEAVQLAKELSTD----DSPGFVNGVLGQVM--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
38 HHSearch 42.0121% -81 - C1 -1TZV - NUSB_THEMA A:[7-135] ----------RMRLAVFKALFQHEFRRDE---DLEQILEEI--LD--E--TYD-KKAKEDARRYIRGIKENLSMIDDLISRYLEKWSLNRLSVVDRNVLRLATYELLFEKDIPIEVT-IDEAIEIAKRYGTE----NSGKFVNGILDRIAKEHAPKE---KFE-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
23 PsiBlast_CBE 41.9032% -58 - C1 -4FP9 NSUN4_HUMAN F:[133-293] --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDG-NQ-V-R-------VTSWDGRKWGE--L--EGD--TYDRVLVDVPCT--TDRHSLHEEENNIFKRSRKKER--QILPVLQVQ-LLAAG-LLATKPGGHVVYSTCSLSHLQNEYVVQGAIELLAN-QYSIQVQ-V--------------E-------DLTHFRRV-F-MDTFCFFSS-CQVGELVIPNLMAN