@TOME V2.3
(Nov 2016)

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3D Common Core:

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Modeller Result :

Complexes Modeling
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Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA0063: (2015-12-20 )
MLVGRRAVRVLCYVPPMPRRLRHPLADLRLPRWVPCLALLALSGCSTVSYYGQLASGQFALLRAREPAAAVIADPQRDARLRERLAKAEKARQFASERLGLPDNRSYRLYADIGRPYVVWNVFATPELSLQPVTHCFPIAGCVAYRGYYSEAAARAEAARQRALGDDVYVGGVQAYSTLGWFDDPILSSMLRWDDERLATLIFHELAHQKFYLRDDTAFNESFATFVEQEGTRQWREYRGLPPADGREEKRREQFTALVLASRARLEALYAGPLDDAAKRAGKAAEFQRLRREYAALSQREWGGESPFKAWIDAPFNNAKLLPFGLYDQWVAAFAVLFRQVGGNWPAFYARVRALGQLPLAERQAALQRLAAAAP

Atome Classification :

(20 SA) ----.........10.......----.20........30.......---.40...-.....50........60--...-----.--------.-...70-..-......80-........90..--......100.......110.......120-....-...130....-...140.......150-----...-....160.......170.......----180.....--..190.....--..200........210-----.------.......220.......230.......240.......250.....--..260..--.......270-------..--..-----------.-------...280...-...-.290...-....300-----........310........320........330.......340.-----..---.-..----..350.......360.......370...--------
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) ----MLVGRRAVRVLCYVPPMP----RRLRHPLADLRLPRWVPCLA---LLALSG-CSTVSYYGQLASGQFAL--LRA-----R--------E-PAAAV-IA-DPQRDARL-RERLAKAEKARQ--FASERLGLPDNRSYRLYADIGRPYVVWNV-FATP-ELSLQPVTHC-FPIAGCVAYRGYYSEA-----AAR-AEAARQRALGDDVYVGGVQAYSTL----GWFDDPIL--SSMLRWDDER--LAT-LIFHELAHQKF------Y------LRDDTAFNESFATFVEQEGTRQWREYRGLPPADGREEKRREQFTA--LVL--AS--RARLEALYA--------GP--LD-----------D-------AAKRAGKAA-EFQ-RLRREYA-ALSQRE------WGGESPFKA-WIDAPFNNAKL-LPFGLYDQWVAAFAVLFRQ-VG-----GN---W-PA----FYARVRALGQLPLAERQAALQRLAAAAP--------
29 HHSearch 75.7517% -20 - C4 -1Z5H TRF3_THEAC A:[158-418] ----------------------------------------------------------MSTYLLYVGIGKFRY--EYE-----K--------YRDIDLI-LA-S--LKD-----------IRSK--YPLD-MARKSVEFYENYFGIPYALPKMHL-ISVP-EFGAGAMENW-----GAITFR----------------EIYM-------------------------DIAEN---SAV--TVKRN--SAN-VIAHEIAHQWF------GDLVTMKWWNDLWLNESFATFMSYKTMDTLFPE----------WSFWGDFFV--SRT--SG--ALRSDSLKN--------TH--PIEVDVRD-----PDEISQIFDEISYGKGASILR-MIEDYAG-YEE--F------RKGISKYLNDHKFG---N-----------AEGSDLWTAIEDVSG-----KP---V-KR----VMEYWIKNPGYPVIKLKRNGRKITMYQT--------
47 Fugue 71.4615% -66 - C3 -3TUZ METN_ECOLI H:[23-362] ----HMIKLSNITKVFHQGTRT----IQALNN-VSLHVPAG-QIYG---VIGASG-A-----------GKSTL--IRCVNLLER--------P-TEGSV-LV-DGQELTTLSESELTKARRQIG--MIFQHFNLLSSRT--VFGNVALPLELDNT---PK-DEVKRRVTEL-LSLVGLGDKHDSYPSNLSGGQKQR-VAIARALASNPKVLLCDQATSALD----PATTRSIL--ELLKDINRRLGLTIL-LITHEMDVVKR------I------C-DCVAVISN-GELIEQ----------------------------------------DTVSEVFS--------HP--KT-----------P-------LAQKFIQST-LHL-DIPEDYQ-ERLQAE------PFTDC--VP-MLRLEFTGQSV-DA-PLLSETARRFNVNNNI-IS-----AQ---M-DY----AGGVKFGIMLTEMHGTQQDTQAAIAWLQEHHVKVEV
44 Fugue 70.3418% -40 - C2 -3WO4 IL18R_HUMAN B:[1-301] ----GPESCTSRPHITVVEGEP----FYLKH------------C----------S-CSLAH---EIETTTKSW--YKS-----S--------G-SQEHV-EL-NPRSSSRI-ALH----DCVLE--FWP--VELNDTGSYFFQMKNYTQKWKLNV-IRRN-KHS------C-FT----------------------------ERQVTSKIVE--VKKFFQITCENSYYQTLVN--STSLYKNCKK--LLL-ENNKNPTIKKN------A------EFEDQGYY-SCVHFLHH---------------NGKLFNITKTFNI--TIV--ED--RSNIVPVLL--------GPK-LN-----------H-------VAVELGK-------NVRLNCS-ALLNEEDVIYWMFGEENGSDP-NIHEEKEMRIM-TPEG---KWHASKVLRIEN-IG-----ES---N-LN----VLYNCTVASTGGTDTKSFILVRKAD-----------
46 Fugue 69.5216% -43 - C3 -3ASM - ? A:[2-309] ----------SNYVIQADQQLL----DALRAHYEGALSDRLPAGAL---FAVKRP-DVVITAYR---SGKVLFAGKAA-----E--------Q-EAAKW-IS-GASASNET-ADHQPSALAAHQ--LGS-----------------------LSA-IGSD-EV-------------GTGDYFGPIVVA-----AAY-VDRPHIAKIAA------------L----GVKDSKQL--N---DEAIKR--IAP-AIMETVPHAVT------V------LD-NPQYNRWQRSGMPQTKMKALLHNRTLVKLVDAIAPAE---PE--AII--ID--EFLKRDSYF--------RY--LS-----------D-------EDRIIRERV-HCLPKAESVHV-SVAAAS------IIARYVFLE-EMEQLSRAVGLLLPKGAGAIVDEAAARIIRA-RG-------------------EEMLETCAKLHFANTKKALAIAKRR----------
33 HHSearch 58.9613% -29 - C4 -3CIA ? A:[149-458] -------HARSWIPIQDTPSVRVTYTARITTDKDLLAVMSANNE--RDGDYFFSMPQAIPPYLIAIGVGDLEF--KAM-----S--------H--QTGI-YA-ESYILDAA------------V--AEFD-DTQAMIDKAEQMYG-KYRWGRYDL-LMLPPSFPFGGMENP-----RLSFIT----------------PTVV--------------------------------------AGDKS--LVN-LIAHELAHSWS------GNLVTNESWRDLWLNEGFTSYVENRIMEAVFGTDRA--VM-------EQALGAQDLN--AE--ILELDASDTQLYIDLKGRD--PDDA---------F-------SGVPYVKGQLFLM-YLEEKFG-RER--F------DAFVLEYFDSHAFQ---S-----------LGTDNFVKYLKANLTDKYPNIV---S-DN----EINEWIFKAGLPSYAPQPTSNAFKVIDK--------
49 Fugue 57.1711% -52 - C3 -2HLZ KHK_HUMAN A:[17-312] GSQILCVGLVVLDVISLVDKYP----KEDSEIRCL----------------------SQRWQRGGNASNSCTI--LSL-----L--------G-APCAFMGSMAPGHVADF-VLDDLRRYSVDLRYTVFQTTGSVPIATVIINEASGSRTILYYD-RSLP-DVSATDFEKVDLTQFKWIHIEGRNASE-----QVKMLQRIDAHNT---------------------------------RQPPEQ--KIR-VSVEV--------------------EKPREELFQLFGYGD-------------------------------VVF--VS--KDVAKHLGF--------QS--AE-----------E-------ALRGLYGRV-RKG-AVLVCAW-AEEGAD------ALGPDGKLL-HSDAFPPPRVV-DTLGAGDTFNASVIFSLSQ---------------------GRSVQEALRFGCQVAGKKCGLQGFDGIV--------
31 HHSearch 57.1111% -19 - C4 -3B34 AMPN_ECOLI A:[203-468] ----------------------------------------------------------KPCYLFALVAGDFDV--LRD-----TFTTRSGREV-ALE-L-YV-DRGNLD------------RAP--WAMT-SLKNSMKWDEERFGLEYDLDIYMI-VAVD-FFNMGAMENK-----GLNIFN----------------SKYV-------------------------LARTDT--ATD--KDYLD--IER-VIGHEYFHNWT------GNRVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRAV--NRINNVRT----------MR--GL--QFAEDASPM--------AH--PIRPDMVIEMNNFY-------TLTVYEKGAEVIR-MIHTLLG-EEN--F------QKGMQLYFERHDGS---A-----------ATCDDFVQAMEDASN-----VD---L-SH----F-RRWYSQSGTPIVTVKDDYNPETEQYT--------
32 HHSearch 56.319% -31 - C4 -3U9W LKHA4_HUMAN A:[195-453] ----------------------------------------------------------IPCYLIALVVGALES--RQI-----G--------P-RT-LV-WS-EKEQVEK------------SA--YEFS-ETESMLKIAEDLGG-PYVWGQYDL-LVLPPSFPYGGMENP-----CLTFVT----------------PT-L-------------------------LA------------GDKS--LSN-VIAHEISHSWT------GNLVTNKTWDHFWLNEGHTVYLERHICGRLFGEKFR--HFNA-LGGWGELQN--SVKTFGE--THPFTKLVVDLTD----IDPDVA-----------Y-------SSVPYEKGFALLF-YLEQLLGGPEI--F------LGFLKAYVEKFSYK---S-----------ITTDDWKDFLYSYFK-----DK---V-DVLNQVDWNAWLYSPGLPPIKPNYDMTLTNACIA--------
34 HHSearch 50.2811% -28 - C4 -2XQ0 LKHA4_YEAST A:[202-462] ----------------------------------------------------------IPAYLIGIASGDLSS--API-----G--------P-RST-V-YT-EPFRLKDC------------Q--WEFENDVEKFIQTAEKIIF-EYEWGTYDILVNVD-SYPYGGMESP-----NMTFAT-----------------PTL-------------------------LA------------HDRS--NID-VIAHELAHSWS------GNLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTR--HFSA-LIGWSDLQN--SID--SMKDPERFSTLVQNLNDN---TD--PDDA---------F-------STVPYEKGFNLLF-HLETILG-GKA-EF------DPFIRHYFKKFAKK---S-----------LDTFQFLDTLYEFYP-----EKKEILDSV----DWETWLYKPGMPPRPHFITALADNVYQL--------
1 PsiBlast_PDB 48.6337% -6 - C4 -4FYQ AMPN_HUMAN A:[294-357] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLVTYREN----SLLFDPLS--SSSS--NKER--VVT-VIAHELAHQWFGNLVTIE------WWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVD--ALA--SS--HPLSTPASE--------IN--TP-----------A-------QISELFDAI-SYS-KGASVLR-MLSSFL------SEDVFKQGL-ASYLHTFAYQN-TIYLNLWDHLQEAVNNRSI-QL-----PT---T-VR----DIMNRWTLQMGFPVITVDTSTGTLSQEH--------
4 PsiBlast_PDB 47.7737% -10 - C4 -4FYT AMPN_HUMAN A:[294-357] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLVTYREN----SLLFDPLS--SSSS--NKER--VVT-VIAHELAHQWFGNLVTIE------WWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVD--ALA--SS--HPLSTPASE--------IN--TP-----------A-------QISELFDAI-SYS-KGASVLR-MLSSFL------SEDVFKQGL-ASYLHTFAYQN-TIYLNLWDHLQEAVNNRSI-QL-----PT---T-VR----DIMNRWTLQMGFPVITVDTSTGTLSQEH--------
2 PsiBlast_PDB 47.2837% -13 - C4 -4FYR AMPN_HUMAN A:[294-357] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLVTYREN----SLLFDPLS--SSSS--NKER--VVT-VIAHELAHQWFGNLVTIE------WWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVD--ALA--SS--HPLSTPASE--------IN--TP-----------A-------QISELFDAI-SYS-KGASVLR-MLSSFL------SEDVFKQGL-ASYLHTFAYQN-TIYLNLWDHLQEAVNNRSI-QL-----PT---T-VR----DIMNRWTLQMGFPVITVDTSTGTLSQEH--------
3 PsiBlast_PDB 45.9237% -5 - C4 -4FYS AMPN_HUMAN A:[294-357] ---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GLVTYREN----SLLFDPLS--SSSS--NKER--VVT-VIAHELAHQWFGNLVTIE------WWNDLWLNEGFASYVEYLGADYAEPTWNLKDLMVLNDVYRVMAVD--ALA--SS--HPLSTPASE--------IN--TP-----------A-------QISELFDAI-SYS-KGASVLR-MLSSFL------SEDVFKQGL-ASYLHTFAYQN-TIYLNLWDHLQEAVNNRSI-QL-----PT---T-VR----DIMNRWTLQMGFPVITVDTSTGTLSQEH--------
27 PsiBlast_CBE 43.9833% -23 - C4 -4P8Q LCAP_HUMAN B:[271-341] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DFEAGAMENWGLL----TFREETLLYDSNTSSMADRK--LVTKIIAHELAHQWFGNLVTMK------WWNDLWLNEGFATFMEYFSLEKIFKELSSYEDFLDARFKTMKKDS--LNS--SH--PISSSVQSS--------EQ--IE-----------E-------MFDSLSYFK-GSS-LLLMLKT-YLSEDV------FQHAVVLYL-HNHSYASIQSD-DLWDSFNEVNQTLDVKRMM-KT-----WT---L-QK----GFPLVTVQKKGKELFIQQERFFLNTSYL--------
26 PsiBlast_CBE 43.4133% -25 - C4 -4PJ6 LCAP_HUMAN A:[271-341] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DFEAGAMENWGLL----TFREETLLYDSNTSSMADRK--LVTKIIAHELAHQWFGNLVTMK------WWNDLWLNEGFATFMEYFSLEKIFKELSSYEDFLDARFKTMKKDS--LNS--SH--PISSSVQSS--------EQ--IE-----------E-------MFDSLSYFK-GSS-LLLMLKT-YLSEDV------FQHAVVLYL-HNHSYASIQSD-DLWDSFNEVTNQTLDVKRM-MK-----TW---T-LQ----KGFPLVTVQKKGKELFIQQERFFLNMSD--------
15 PsiBlast_PDB 43.2936% 7 - C4 -4KX9 AMPE_HUMAN A:[308-354] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NQQR--VAT-VVAHELVHQWFGNIVTMD------WWEDLWLNEGFASFFEFLGVNHAETDWQMRDQMLLEDVLPVQEDD--SLM--SS--HPIIVTVTT--------PD--EI-----------T-------SVFDGISYS-KGS-SILRMLE-DWIKPE------NFQKGCQMY-LEKYQFKNAKT-SDFWAALEEASRLPVKEVM-DT-----WT---R-QM----GYPVLNVNGVKNITQKRFLLDPRANPSQ--------
28 PsiBlast_CBE 43.2433% -34 - C4 -4P8Q LCAP_HUMAN A:[271-341] ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DFEAGAMENWGLL----TFREETLLYDSNTSSMADRK--LVTKIIAHELAHQWFGNLVTMK------WWNDLWLNEGFATFMEYFSLEKIFKELSSYEDFLDARFKTMKKDS--LNS--SH--PISSSVQSS--------EQ--IE-----------E-------MFDSLSYFK-GSS-LLLMLKT-YLSEDV------FQHAVVLYL-HNHSYASIQSD-DLWDSFNEVNQTLDVKRMM-KT-----WT---L-QK----GFPLVTVQKKGKELFIQQERFFLNMSDT--------
51 Fugue 43.1611% 79 * C3 *3SJA - GET1_YEAST C:[1-61] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MNELSKKYLAKVK--ERH--EL--KEFNNSI----------SA--QD-----------N-------YAKWTKNNR-KLD-SLDKEIN-NLKDEI------QSENHH--------------------------------------------------------------------------------------------
11 PsiBlast_PDB 43.0142% 16 - C4 -4F5C AMPN_PIG A:[347-398] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------DPQS--SSIS--NKER--VVT-VIAHELAHQWFGNLVTLA------WWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVD--ALA--SS--HPLTTPAEE--------VN--TP-----------A-------QISEMFDSI-SYS-KGASVIR-MLSNFL------TEDLFKEGL-ASYLHAFAYQN-TTYLDLWEHLQKAVDAQTS-IR-----LP---D-TV----RAIMDRWTLQMGFPVITVDTKTGNISQK--------
19 PsiBlast_PDB 42.9936% 2 - C4 -4KXD AMPE_HUMAN A:[308-354] -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NQQR--VAT-VVAHELVHQWFGNIVTMD------WWEDLWLNEGFASFFEFLGVNHAETDWQMRDQMLLEDVLPVQEDD--SLM--SS--HPIIVTVTT--------PD--EI-----------T-------SVFDGISYS-KGS-SILRMLE-DWIKPE------NFQKGCQMY-LEKYQFKNAKT-SDFWAALEEASRLPVKEVM-DT-----WT---R-QM----GYPVLNVNGVKNITQKRFLLDPRANPSQ--------