@TOME V2.3
(Nov 2016)

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Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
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Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Sequence color : MutatedHelixStrandConserved

Query sequence : PA0156: (2015-12-24 )
MSDARGAFHSKGRWSRMALPAILCAGLLVGCGAEPPAEEHVRVLAQTVKMAEFASATSITGDIQARVQADQSFRVGGKIVERLVDVGDHVAAGQVLARLDPQDQRSNVENAQAAVAAQQAQSKLADLNYQRQKALLPKGYTSQSEYDQALASVRSAQSSLKAAQAQLANARDLLSYTELRASDAGVITARQAEVGQVVQATVPIFTLARDGERDAVFNVYESLFSHDVDGQRITVSLLGKPEVTASGKVREITPTVDERSGTLKVKVGLDSVPAEMSLGSVVNASVAAPAEHSVVLPWSALSKVGEQPAVWLLDQQGKARLQPVRVARYASEKVVIDGGLEAGQTVVTVGGQLLHPGQVVEVAQPPQPTQSTASRDAVGGGQP

Atome Classification :

(20 SA) .........10........20........30........40........50.-----.......60.....--..----.70----........80------...-......90........100.......110.-....-------..120------.-------.---......130.......140.......150-.....-------.-----..160------........---------170.-------.---------.....180---.........190......---.-200---------------..---.---......--------210.....-..220...--...-----.----230--------......--..240.......250.......260-........270.......280-..---...---..-.--290........300......--.310.......320........330.......340.......350........360...-....370.......380.
(Atome) (Ident) (Tito) (Num) (Ligand) (Uniprot) MSDARGAFHSKGRWSRMALPAILCAGLLVGCGAEPPAEEHVRVLAQTVKMAE-----FASATSITGDIQAR--VQ----ADQ----SFRVGGKIV-------ERL-VDVGDHVAAGQVLARLDPQDQRSNVENAQA-AVAA-------QQAQ-------S-------K---LADLNYQRQKALLPKGYTSQSEYDQALA--SVRSA-------Q-----SSLK-------AAQAQLAN---------ARDL-------L---------SYTELR-----ASDAGVITARQAEVGQVV---Q-A-----------------TV---P---IFTLAR--------DGERDAVF-NVYESLFS--HDV-----D----GQ---------RITVSL--LGKPEVTASGKVREITPTVDERSG--TLKVKVGLDSVPAEMSLGS-V-VN---ASV---AA-P--AE-HSVVLPWSALSKVGEQP--AVWLLDQQGKARL-QPVRVARYASEKVVIDGGLEAGQTVVTVGG-QLLHPGQVVEVAQP-PQPTQSTASRDAVGGGQP
21 HHSearch 79.5822% -62 - C4 -3LNN ? A:[27-350] ---------------------------------------RRTLAVAPATRET-----VAAPFNLPAMIEADPAKL----VKV----LPPLAGRIV-------SLN-KQLGDEVKAGDVLFTIDSADLAQA----NS-DAAK-------ARAA-------M-------T---MARRNLDRQRELDKSEIAAKRDFEQAQS--DYDQA-------A-----SESQ-------RADARLAQ---------LGAK-------GGGTLQAGGGHILAVR-----SPINGRVVDLNAATGAYW---N-DT----------------TA---S---LMTVAD--------LSHVFVTA-NAQEKDLG--HVY-----V----GQ---------SATVKF--DAYD-DPQPGKVRYVGQILDADTR--TTKVRMVFDNPDGRLRPGM-F-AQ---ATF---LS-Q--PH-EGIVVPMSAIVQSGFYT--RAFVEVAPWQFEP-RVIKLGAQIGDRMEVKSGLSAGDRVVVKEG-VLLND----------------------------
7 PsiBlast_PDB 76.2923% -64 - C4 -3LNN ? A:[64-350] -----------------------------------------------------------------------------------------LAGRIV-------SLN-KQLGDEVKAGDVLFTIDSAD----LAQANS-DAAK-------ARAA-------M-------T---MARRNLDRQRELDKSEIAAKRDFEQAQS--DYDQA-------A-----SESQ-------RADARLAQLGAKGGGTLQAGG-------G---------HILAVR-----SPINGRVVDLNAATGAYW---NDT-----------------TA---S---LMTVAD--------LSHVFVTA-NAQEKDLG--HVY-----V----GQ---------SATVKFDAYDDPQ---PGKVRYVGQILDADTR--TTKVRMVFDNPDGRLRPGM-F-AQ---ATF---LS-Q--PH-EGIVVPMSAIVQSGFYT--RAFVEVAPWQFEP-RVIKLGAQIGDRMEVKSGLSAGDRVVVKEG-VLLND----------------------------
5 PsiBlast_PDB 75.0926% -35 - C4 -4L8J ? A:[6-325] -------------------------------------------LVRPVKTAT-----VSSQSVILKDFSGM--VE----AVEYVKLAFRVSGQII-------NLP-VVEGQRVKKGQLIAAIDPRD-------ISL-QYAA-------DKAA-------Y-------E---TAAAQVERNKRLLGRQAISLQEYEISVA--NYQKA-------K-----S----------AYELSTNN---------MRD--------------------TKLL-----APFDGSIETRLVENYQRV---N-SGEGIVRLVNTRKLRIKFTV---P---DDYLYL--------LRAKDATF-KVEFDTYK--GTV-----F----NA---------RLEEYL------DISTDGTGIPVTIIIDD----------AAFDRTIYDVKPGF-T-CNIRLASD---IA-PFIEE-KLMNVPLSAVFGDSENKNTYVWIVKDNKVNRR-EVTVYSPTGEANLLISKGLKPGETVVTAGV-YQLVEGQRIKEVK--------------------
24 HHSearch 73.2419% -61 - C4 -3NE5 - CUSB_ECOLI B:[92-395] ----------------------------------------LGVKTATVTRGP-----LTFAQSFPANVSYNEYQY----AIV----QARAAGFID-------KVYPLTVGDKVQKGTPLLDLTIPDWVEAQS-----EYLL-------LRET-------G-------GTATQTEGILERLRLA--------------------GMP-------E-----ADIR-----------RLIA---------TQKI-------Q---------TRFTLK-----APIDGVITAFDLRAGMNI---A-K-----------------DN---V---VAKIQG--------MDPVWVTA-AIPESIAW--LVK-----D----AS---------QFTLTV--PARPDKTLTIRKWTLLPGVDAATR--TLQLRLEVDNADEALKPGM-N-AW---LQL---NT-A--SE-PMLLIPSQALIDTGSEQ--RVITVDADGRFVP-KRVAVFQASQGVTALRSGLAEGEKVVSSGL-FLIDSEANISGALE-RMRS--------------
4 PsiBlast_PDB 70.8927% -44 - C4 -3FPP - MACA_ECOLI A:[53-308] ----------------------------------------------------------------TGKLDAL--RK----VDV----GAQVSGQLK-------TLS-VAIGDKVKKDQLLGVIDPEQAENQIKEVEA-TLME-------LRAQ-------RQQAEAELK---LARVTYSRQQRLAQTQAVSQQDLDNAATEMAVKQA-------QIGTIDAQIK-------RNQASLDT---------AKTN-------L---------DYTRIV-----APMAGEVTQITTLQGQTVIAAQ-Q-----------------AP---N---ILTLAD--------MSAMLVKA-QVSEADVI--HLK-----P----GQ---------KAWFTV--LGDQLTRYEGQIKDVLPTPEKVND--AIFYYARFE-VPNPNGLLR-LDMT---AQVHIQLT-D--VK-NVLT---------------------------------------------------------------------------------------------
23 HHSearch 70.7825% -48 - C4 -3FPP - MACA_ECOLI A:[43-308] -------------------------------------------------PGD-----LQQSVLATGKLDAL--RK----VDV----GAQVSGQLK-------TLS-VAIGDKVKKDQLLGVIDPEQAENQIKEVEA-TLMELRAQRQQAEAE-------L-------K---LARVTYSRQQRLAQTQAVSQQDLDNAAT--EMAVK-------Q-----AQIGTIDAQIKRNQASLDT---------AKTN-------L---------DYTRIV-----APMAGEVTQITTLQGQTV---I-A-----------------AQQAPN---ILTLAD--------MSAMLVKA-QVSEADVI--HLK-----P----GQ---------KAWFTV--LGDQLTRYEGQIKDVLPTPEKVNDAIFYYARFEVPNPNGLLRLDM-T-AQ---VHI---QLTD--VK-NVLT---------------------------------------------------------------------------------------------
48 Fugue 69.9024% -36 - C4 -3FPP - MACA_ECOLI A:[43-308] -------------------------------------------------PGD-----LQQSVLATGKLDAL--RK----VDV----GAQVSGQLK-------TLS-VAIGDKVKKDQLLGVIDPEQAENQIKEVEA-TLME-------LRAQRQQAEAEL-------K---LARVTYSRQQRLAQTQAVSQQDLDNAAT--EMAVK-------Q-----AQIG-------TIDAQIKR---------NQASLDTAKTNL---------DYTRIV-----APMAGEVTQITTLQGQTV---I-A-----------------AQ---QAPNILTLAD--------MSAMLVKA-QVSEADVI--HLK-----P----GQ---------KAWFTV--LGDQLTRYEGQIKDVLPTPEKVND--AIFY-------------------------------------------------------------------------------------------YARFEVPNPN-GLLRLDMTAQVHIQ-LTDVKNVLT---------
3 PsiBlast_PDB 62.3524% -40 - C4 -2V4D MEXA_PSEAE A:[28-259] --------------------------------------------------N----------TELPGRTNAF--RI----AEV----RPQVNGIIL-------KRL-FKEGSDVKAGQQLYQIDPATYEADYQSAQA-NLAS-------TQEQ-------A-----------------QRYKLLVADQAVSKQQYADANA--AYLQS-------K-----AAVE-------QARINLRY---------TK-V-------L---------SPISGRIGRSAVTEGALVTNGQANAMATV---Q-Q-----------------LD---P---IYVDVT--------Q-PSTALL-RLRRELAS--GQLERAGDN----AA---------KVSLKL--EDGSQYPLEGRLEFSEVSVDEGTG--SVTIRAVFPNPNNELLPGM-F-VH---AQL-------------------------------------------------------------------------------------------------------------
47 Fugue 61.9723% -44 - C4 -1T5E MEXA_PSEAE A:[29-259] -------------------------------------------------------------TELPGRTNAF--RI----AEV----RPQVNGIIL-------KRL-FKEGSDVKAGQQLYQIDP-------ATYEA-DYQS-------AQAN-------L-------A---STQEQAQRYKLLVADQAVSKQQYADANA--AYLQS-------K-----AAVE-------QARINLR--------------------------------YTKVL-----SPISGRIGRSAVTEGALV---T-NGQ---------------AN---A---MATVQQLDPIYVDVTQPSTALL-RLRRELAS--GQL-----E----RAGDNAA----KVSLKL--EDGSQYPLEGRLEFSEVSVDEGTG--SVTIRAVFPNPNNELLPGM-F-VH---AQL-------------------------------------------------------------------------------------------------------------
2 PsiBlast_PDB 60.8024% -38 - C4 -1VF7 - MEXA_PSEAE A:[26-262] ------------------------------------------------TLN----------TELPGRTNAF--RI----AEV----RPQVNGIIL-------KRL-FKEGSDVKAGQQLYQIDPATYEADYQSAQA-NLAS-------TQEQ-------A-----------------QRYKLLVADQAVSKQQYADANA--AYLQS-------K-----AAVE-------QARINLRY---------TK-V-------L---------SPISGRIGRSAVTEGALVTNGQANAMATV---Q-Q-----------------LD---P---IYVDVT--------Q-PSTALL-RLRRELAS--GQLERAGDN----AA---------KVSLKL--EDGSQYPLEGRLEFSEVSVDEGTG--SVTIRAVFPNPNNELLPGM-F-VH---AQL---QE-G------------------------------------------------------------------------------------------------------
22 HHSearch 60.4422% -45 - C4 -1VF7 - MEXA_PSEAE A:[26-262] ----------------------------------------------------------TLNTELPGRTNAF--RI----AEV----RPQVNGIIL-------KRL-FKEGSDVKAGQQLYQIDPATYEADYQSAQA---------------N-------L-------A---STQEQAQRYKLLVADQAVSKQQYADANA--AYLQS--------------------------KAAVEQ---------ARIN-------L---------RYTKVL-----SPISGRIGRSAVTEGALV---T-N-----------------GQ---ANA-MATVQQ--------LDPIYVDV-TQPSTALL--RLR-----RELASGQLERAGDNAAKVSLKL--EDGSQYPLEGRLEFSEVSVDEGTG--SVTIRAVFPNPNNELLPGM-F-VH---AQL---QEG-------------------------------------------------------------------------------------------------------
1 PsiBlast_PDB 60.1324% -36 - C4 -1T5E MEXA_PSEAE A:[29-259] -------------------------------------------------------------TELPGRTNAF--RI----AEV----RPQVNGIIL-------KRL-FKEGSDVKAGQQLYQIDPATYEADYQSAQA-NLAS-------TQEQ-------A-----------------QRYKLLVADQAVSKQQYADANA--AYLQS-------K-----AAVE-------QARINLRY---------TK-V-------L---------SPISGRIGRSAVTEGALVTNGQANAMATV---Q-Q-----------------LD---P---IYVDVT--------Q-PSTALL-RLRRELAS--GQLERAGDN----AA---------KVSLKL--EDGSQYPLEGRLEFSEVSVDEGTG--SVTIRAVFPNPNNELLPGM-F-VH---AQL-------------------------------------------------------------------------------------------------------------
45 Fugue 58.4515% -29 - C4 -4KKU - ? A:[23-296] ---------------------------------------------------------------------------------------------------------------------------------YRFPVIAMKVKK-------GILS-------D-------Y---LSLNGDVDTKVKADIFPDAVGKITSLRI--K-------------------LG-------AYVQKGQI---------VATL-------D---------PKSPVR-----APISGYILNITKKIGETV---N-P-----------------QS---N---IAVVGR--------IDTKQILT-YVSEKYIS--NIK-----V----GN---------DAIIEV--GAYSNEKFKAKVSEISPILDSKSR--TIEVYLTPIGSNLDKLIIGMF-SK---IKL---IT-K--RFKDVIKISREAVVEREGKK--FVFKVDLESKSVQMLPITVLFEIDNIVALSGEVEENDLIVV-EGMSALSNGSLINLVDT-KEGLSAESNI--------
51 Fugue 53.2618% -9 - C3 -3ZPJ - ? A:[1-356] MTTLEEINLLVERGYYEEALAKVYE--------IEDPIEQVQVLTKIVVTIYQHDGPMEWIPSIMEDAMYI--AKKLRDPAN----KAVAYSIIA-------STL-AIMEYEEDAMDFFNRAIDEANEIESPIEKG-MVLS-------TLAY---------------H---LAIAGY----------------PDNALE--IFNIA-------F-----DTII-------GAETSYTH---------KVDG-------I---------LRIGDL-----LEKAGD-TLPSNEAMDFY---K-M-----------------AF---D---IFDKLH--------VNQRAAIV-EKKIELAKTVYDV-----G----LP---------QIRAAL--LKGKNHYALAIIKKKYSGVMRLIG--ELEVALWMKRVNNMEYLDV-V-DK---AFE---CC-E--SP-R--------FTDVNVQH--IARLLTELGNLR-----RALKFAKEIQNIHKRSEALKAIALELV-RRKKFEEVKKIIESIPDPKIREEALNEIGTIE-
6 PsiBlast_PDB 49.7625% -13 - C4 -4DK0 - ? A:[33-260] -------------------------------------------LTEEVKRGN-----IEKNVVATGSIESI--NT----VDV----GAQVSGKIT-------KLY-VKLGQQVKKGDLLAEIDSTTQINTLNTRKA-ALAS-------YQAQLVARKTAY-------D---VALSNYQRLSKLYGQKATSLDTLNTAKA--TLNNAKAEMDVVQ-----ENIK-------QAEIEVNT---------AETN-------L---------GYTKIT-----SPIDGTVISTPVSEGQTV---N-SNQ---------------TT---P---TIIKVA--------DLSKMRIKPEISEGDIT--KVK-----A----GQ---------DVTFTI--LSDNKTVYHAKIDSVDPATTTISD--SAVYYYANIIVENPEHVLR-I-GM---TTE---NN-I--KI-ADVQNVLFIPNLAVQQD--KYVVNVLNTTQER-EIEIGVQNDFQTEVKSGLTEGEKVVISQ------------------------------------
9 PsiBlast_PDB 49.5231% -18 - C4 -2F1M - ACRA_ECOLI A:[53-196] ------------------------------------------------------------TTELPGRTSAY--RI----AEV----RPQVSGIIL-------KRN-FKEGSDIEAGVSLYQIDPATYQATYDSAKG-DLAK-------AQAA-------A-------N---IAQLTVNRYQKLLGTQYISKQEYDQALA--DAQQA-------N-----AAVT-------AAKAAVET---------ARIN-------L---------AYTKVT-----SPISGRIGKSNVTEGALV---Q-N-----------------GQ---A---TALATV--------QQLDPIYV-DVTQSSND--MKA-----K----VS---------LITSDG--IKFPQDGTLEFSDVTVDQTTGSIT--LRAIFPNPDHTMMPGMFVR-A-RL---E---------------------------------------------------------------------------------------------------------------
8 PsiBlast_PDB 47.6926% 1 - C4 -4DK1 - MEXA_PSEAE A:[34-232] --------------------------------------------TEEVKRGN-----IEKNVVATGSIESI--NT----VDV----GAQVSGKIT-------KLY-VKLGQQVKKGDLLAEIDPATYEADYQSAQA-NLAS-------TQEQ-------A-----------------QRYKLLVADQAVSKQQY----A--DANAA-------Y-----LQSK-------AAVEQ------------ARIN-------L---------RYTKIT-----SPIDGTVISTPVSEGQTV---N-SNQ---------------TT---P---TIIKVA--------DLSKMRIKPEISEGDIT--KVK-----A----GQ---------DVTFTI--LSDNKTVYHAKIDSVDPATTTISD--SAVYYYANIIVENPEHVLR-I-GM---TTE---NN-I--KI-ADVQNVLFIPNLAVQEI--GVQNDFQTEVKSG-LTEGEKVVIS------------------------------------------------------
35 HHSearch 44.4829% -38 - C4 -2D5D - ? A:[77-145] --------------------------------------------------------------------------E----NVV----SAPMPGKVL-------RVL-VRVGDRVRVGQGLLVLEAMKM----------------------------------------------------------------------------------------------------------------------------------------------ENEIP-----SPRDGVVKRILVKEGEAV---D-T-----------------GQ---P---LIEL----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
36 HHSearch 41.9120% -56 - C4 -1BDO BCCP_ECOLI A:[3-79] -------------------------------------------------------------------------SG----HIV----RSPMVGTFYRTPSPDAKAF-IEVGQKVNVGDTLCIVEAMK----------------------------------------------------------------------------------------------------------------------------------------------MMNQIE-----ADKSGTVKAILVESGQPV---E-F-----------------DE---P---LVVIE---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
34 HHSearch 40.1823% -48 - C4 -1DCZ - BCCP_PROFR A:[53-122] -------------------------------------------------------------------------GE----GEI----PAPLAGTVS-------KIL-VKEGDTVKAGQTVLVLEAMKM----------------------------------------------------------------------------------------------------------------------------------------------ETEIN-----APTDGKVEKVLVKERDAV---Q-G-----------------GQ---G---LIKIG---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------